Prupe.1G519800_v2.0.a1

Belongs to the UDP-glycosyltransferase family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp01
OG0000553
Physical Location & Seq
Reverse (-)
42674777 .. 42677556
2780 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.1G519800.1

Sequence Viewer

Length: 1464 bp
ATGGCTTTTTTCAATGCCTTGACCTCAGAGAAGCCACATGCAGTATGCATGCCATTCCCAGCTCAAGGCCACATAAACCCAATGCTAAAACTAGCCAAACTCCTCCACTTCAAAGGCTTCCATATAACCTTTGTCAACACTGAGTTTATCCACAAACGCCTACTTAAATCCCAAGGCCCCAACTCTCTCAATGGCCTCCCTACTTTTCGTTTCAAAATGATCCCCGATGGCCTGCCTCCAGCTGATGCTAATGTTGCTGCCCAACATATGCCGTCCCTCTGCCAATCCATTAGGAAACACTGCTTACAACCCTTCAGAGGCCTTCTTTCGAAGCTCAAATCTTCGCCGAATTCGCCTCCGGTTACTTGTCTAGTTTCTGATGGCATCATGAACTTCAGTCTCGATGCAGCCCAAGAACTCGGAATTCCGGGTGTTATTTTTTGGACAACTAGTGCTTGTGCCTTCATGGGCTACATTCAGTATGGACCTCTCATTCAAAAGGGTTTAGTTCCTCTTAAAGATGCCAGATACTTGACAAATGGGTATTTAGATACTGTGATAGATTGGATACCTGGAATGAAAAGTATCCGATTGAAGGACATCCCAAGCTTCATTAGAACAACAGACCCAAATGACCCGATTCTGGATTTCATTATGGTTGATACAGAACGAGCTAAAAGAGCTTCTGCCATCATTTTGAACACGTTTGATGCCTTAGAGCATGAAGTTTTAGATGCACTTTCGACTTTGCTACCACCTATTTACTGCATTGGACCCCTCTATCTACAACTTGATCATATCCCAGCAGATAACGAATTGAAGTCCATTGGATCAAACCTGTGGACAGAGGAAACAGAGTGTCTTCAATGGCTTGACTCTAAAGAACCCAATTCTGTGGTTTATGTCAATTTTGGAAGCAGCACAGTCATGACATCTGAGCAGCTAACTGAGTTTGCTTGGGGGCTTGCAAATAGCAACAAGGCCTTTTTTTGGGTCATTAGACCTGATCTTGTTTGTGAGGGGAAATCAGTTGTGGTTGCACCAGAGTTTGTGGAAGAGACCAAGGAAAGGGGTCTATTGGCAAGTTGGTGCCCTCAAGAACAAGTCTTGATACACCCAGCTATCGGAGGGTTCTTGACACACTGTGGATGGAACTCTACTATTGAAAGTGTGGGAGGTGGGGTGCCCATGATCTGTTGGCCTTTCAATGCTGACCAACAAACCAATTGCAGGTTTTGTTGCAGTGAATGGGGCATAGGGTTGGAGATAGAGGGTGACGTTAAAAGATATTACATAGAGGGCCTTGTGAGAGAGTTGATGGAAGGAGGGGAGGGCAAAAAATTGAGGAAGAAAGCCTTGGAATGGAAGAAGTTGGCAAAGGAGGCTACTACTGGTTCTAATGGATCATCCTTTTTGGATTTGGATCAAATGGTTAACAAGGTGCTTCTATCTCCCAGAAATTAG

Protein Analysis

488

Amino Acids

54.18

Weight (kDa)

6.03

Isoelectric Point (pI)

42.07

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000553)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G22340 AT1G22360 AT1G22360 AT1G22370 AT1G22370 AT1G22380 AT1G22400 AT1G78270
fragaria_vesca FvH4_5g36970 FvH4_5g36972 FvH4_5g36980 FvH4_5g37000 FvH4_5g37020 FvH4_5g37020 FvH4_5g37020 FvH4_5g37020 FvH4_5g37020 FvH4_5g37020
malus_domestica MD08G1185000.v1.1 MD08G1185500.v1.1 MD08G1185600.v1.1 MD08G1185700.v1.1 MD15G1371800.v1.1
prunus_persica Prupe.1G519500_v2.0.a1 Prupe.1G519600_v2.0.a1 Prupe.1G519700_v2.0.a1 Prupe.1G519800_v2.0.a1 Prupe.1G519900_v2.0.a1 Prupe.1G520000_v2.0.a1 Prupe.1G520100_v2.0.a1 Prupe.1G520200_v2.0.a1 Prupe.1G520300_v2.0.a1 Prupe.1G520400_v2.0.a1 Prupe.1G520400_v2.0.a1
pyrus_communis pycom08g15890 pycom08g15930 pycom15g33310
rosa_chinensis RchiOBHm_Chr7g0231031 RchiOBHm_Chr7g0231091 RchiOBHm_Chr7g0243731 RchiOBHm_Chr7g0243761 RchiOBHm_Chr7g0243781 RchiOBHm_Chr7g0243791 RchiOBHm_Chr7g0243821
rosa_laevigata RLG00000000832 RLG00000000834 RLG00000000835 RLG00000000836 RLG00000000837 RLG00000000838 RLG00000001435 RLG00000001436 RLG00000001650
rosa_multiflora Rmu_co8142950.1_g000001 Rmu_sc0000780.1_g000001 Rmu_sc0000780.1_g000003 Rmu_sc0000780.1_g000006 Rmu_sc0000780.1_g000007 Rmu_sc0012403.1_g000014
rosa_roxburghii Rroxscaffold_3G00221740 Rroxscaffold_3G00221770 Rroxscaffold_3G00221810 Rroxscaffold_3G00221820
rosa_rugosa Rorug07G0264200 Rorug07G0264400 Rorug07G0321000 Rorug07G0321300 Rorug07G0321600 Rorug07G0321700 Rorug07G0321800
rosa_samantha Rh7CG437000 Rh7CG437300 Rh7CG493400 Rh7CG493800 Rh7CG494000 Rh7CG494500
rosa_wichuraiana Rw7G034550 Rw7G039670 Rw7G039680 Rw7G039690 Rw7G039700 Rw7G039740 Rw7G039750

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 1221
AccB1I GGYRCC 2 cut(s) 1089, 1183
AclWI GGATC 4 cut(s) 214, 838, 1411, 1431
AcsI RAATTY 2 cut(s) 349, 423
AcuI CTGAAG 2 cut(s) 298, 379
AdeI CACNNNGTG 1 cut(s) 1145
AfiI CCNNNNNNNGG 9 cut(s) 65, 317, 595, 643, 990, 1068, 1124, 1230, 1362
AflIII ACRYGT 1 cut(s) 702
AhlI ACTAGT 1 cut(s) 449
AjnI CCWGG 1 cut(s) 571
AjuI GAANNNNNNNTTGG 2 cut(s) 1340, 1372
AluBI AGCT 8 cut(s) 62, 242, 334, 609, 674, 683, 943, 1121
AluI AGCT 8 cut(s) 62, 242, 334, 609, 674, 683, 943, 1121
Alw26I GTCTC 2 cut(s) 404, 1052
AlwI GGATC 4 cut(s) 214, 838, 1411, 1431
AoxI GGCC 8 cut(s) 67, 175, 193, 229, 319, 981, 1199, 1300
ApeKI GCWGC 4 cut(s) 257, 407, 918, 940
ApoI RAATTY 2 cut(s) 349, 423
AspS9I GGNCC 4 cut(s) 176, 485, 773, 1300
AsuC2I CCSGG 1 cut(s) 429
AsuHPI GGTGA 1 cut(s) 1286
AsuII TTCGAA 1 cut(s) 329
AvaII GGWCC 2 cut(s) 485, 773
BaeGI GKGCMC 2 cut(s) 1094, 1188
BanI GGYRCC 2 cut(s) 1089, 1183
BbsI GAAGAC 1 cut(s) 854
BbvI GCAGC 4 cut(s) 244, 419, 930, 952
BccI CCATC 5 cut(s) 221, 374, 698, 1143, 1312
BceAI ACGGC 1 cut(s) 256
BciT130I CCWGG 1 cut(s) 573
BciVI GTATCC 2 cut(s) 561, 596
BclI TGATCA 1 cut(s) 793
BcnI CCSGG 1 cut(s) 429
BcoDI GTCTC 2 cut(s) 404, 1052
BcuI ACTAGT 1 cut(s) 449
BfaI CTAG 3 cut(s) 92, 371, 450
BfuAI ACCTGC 1 cut(s) 1221
BfuI GTATCC 2 cut(s) 561, 596
BisI GCNGC 4 cut(s) 258, 408, 919, 941
BlsI GCNGC 4 cut(s) 259, 409, 920, 942
Bme1390I CCNGG 2 cut(s) 429, 573
Bme18I GGWCC 2 cut(s) 485, 773
BmgT120I GGNCC 4 cut(s) 176, 485, 773, 1300
BmiI GGNNCC 4 cut(s) 178, 775, 1091, 1185
BmrFI CCNGG 2 cut(s) 429, 573
BmsI GCATC 6 cut(s) 235, 393, 394, 511, 700, 724
BpiI GAAGAC 1 cut(s) 854
BpmI CTGGAG 1 cut(s) 222
Bpu14I TTCGAA 1 cut(s) 329
BpuEI CTTGAG 2 cut(s) 48, 1080
BpuMI CCSGG 1 cut(s) 429
BsaBI GATNNNNATC 1 cut(s) 1422
BsaI GGTCTC 1 cut(s) 1052
BsaJI CCNNGG 3 cut(s) 172, 1062, 1356
BsaWI WCCGGW 1 cut(s) 358
BsaXI ACNNNNNCTCC 2 cut(s) 1167, 1197
Bsc4I CCNNNNNNNGG 9 cut(s) 65, 317, 595, 643, 990, 1068, 1124, 1230, 1362
Bse1I ACTGG 1 cut(s) 1396
Bse8I GATNNNNATC 1 cut(s) 1422
BseBI CCWGG 1 cut(s) 573
BseDI CCNNGG 3 cut(s) 172, 1062, 1356
BseGI GGATG 3 cut(s) 600, 1154, 1406
BseJI GATNNNNATC 1 cut(s) 1422
BseLI CCNNNNNNNGG 9 cut(s) 65, 317, 595, 643, 990, 1068, 1124, 1230, 1362
BseMII CTCAG 4 cut(s) 39, 132, 927, 939
BseNI ACTGG 1 cut(s) 1396
BseRI GAGGAG 1 cut(s) 92
BseSI GKGCMC 2 cut(s) 1094, 1188
BseXI GCAGC 4 cut(s) 244, 419, 930, 952
BseYI CCCAGC 3 cut(s) 58, 802, 1117
BshFI GGCC 8 cut(s) 69, 177, 195, 231, 321, 983, 1201, 1302
BshNI GGYRCC 2 cut(s) 1089, 1183
BsiSI CCGG 2 cut(s) 359, 428
BslFI GGGAC 1 cut(s) 259
BslI CCNNNNNNNGG 9 cut(s) 65, 317, 595, 643, 990, 1068, 1124, 1230, 1362
BsmAI GTCTC 2 cut(s) 404, 1052
BsmFI GGGAC 1 cut(s) 259
BsnI GGCC 8 cut(s) 69, 177, 195, 231, 321, 983, 1201, 1302
Bso31I GGTCTC 1 cut(s) 1052
Bsp119I TTCGAA 1 cut(s) 329
Bsp1286I GDGCHC 2 cut(s) 1094, 1188
Bsp143I GATC 7 cut(s) 219, 793, 830, 1006, 1191, 1403, 1423
BspANI GGCC 8 cut(s) 69, 177, 195, 231, 321, 983, 1201, 1302
BspCNI CTCAG 4 cut(s) 38, 133, 928, 940
BspHI TCATGA 2 cut(s) 387, 927
BspLI GGNNCC 4 cut(s) 178, 775, 1091, 1185
BspMI ACCTGC 1 cut(s) 1221
BspPI GGATC 4 cut(s) 214, 838, 1411, 1431
BspT104I TTCGAA 1 cut(s) 329
BspT107I GGYRCC 2 cut(s) 1089, 1183
BspTNI GGTCTC 1 cut(s) 1052
BsrI ACTGG 1 cut(s) 1396
BssECI CCNNGG 3 cut(s) 172, 1062, 1356
BssMI GATC 7 cut(s) 219, 793, 830, 1006, 1191, 1403, 1423
BssT1I CCWWGG 3 cut(s) 172, 1062, 1356
Bst2UI CCWGG 1 cut(s) 573
Bst4CI ACNGT 3 cut(s) 556, 925, 1145
Bst6I CTCTTC 1 cut(s) 1050
BstBI TTCGAA 1 cut(s) 329
BstC8I GCNNGC 3 cut(s) 50, 233, 966
BstDEI CTNAG 5 cut(s) 25, 141, 715, 936, 948
BstF5I GGATG 3 cut(s) 600, 1154, 1406
BstKTI GATC 7 cut(s) 222, 796, 833, 1009, 1194, 1406, 1426
BstMAI GTCTC 2 cut(s) 404, 1052
BstMBI GATC 7 cut(s) 219, 793, 830, 1006, 1191, 1403, 1423
BstMWI GCNNNNNNNGC 4 cut(s) 254, 352, 680, 1382
BstNI CCWGG 1 cut(s) 573
BstNSI RCATGY 2 cut(s) 41, 52
BstSCI CCNGG 2 cut(s) 427, 571
BstSLI GKGCMC 2 cut(s) 1094, 1188
BstV1I GCAGC 4 cut(s) 244, 419, 930, 952
BstV2I GAAGAC 1 cut(s) 854
BstXI CCANNNNNNTGG 1 cut(s) 895
BsuI GTATCC 2 cut(s) 561, 596
BsuRI GGCC 8 cut(s) 69, 177, 195, 231, 321, 983, 1201, 1302
BtsCI GGATG 3 cut(s) 600, 1154, 1406
BtsI GCAGTG 2 cut(s) 298, 1249
BtsIMutI CAGTG 4 cut(s) 138, 298, 1141, 1249
BveI ACCTGC 1 cut(s) 1221
Cac8I GCNNGC 3 cut(s) 50, 233, 966
CciI TCATGA 2 cut(s) 387, 927
Cfr13I GGNCC 4 cut(s) 176, 485, 773, 1300
CviAII CATG 7 cut(s) 38, 49, 388, 466, 722, 928, 1189
DdeI CTNAG 5 cut(s) 25, 141, 715, 936, 948
DpnI GATC 7 cut(s) 221, 795, 832, 1008, 1193, 1405, 1425
DpnII GATC 7 cut(s) 219, 793, 830, 1006, 1191, 1403, 1423
DraIII CACNNNGTG 1 cut(s) 1145
Eam1104I CTCTTC 1 cut(s) 1050
EarI CTCTTC 1 cut(s) 1050
Eco130I CCWWGG 3 cut(s) 172, 1062, 1356
Eco147I AGGCCT 2 cut(s) 321, 983
Eco31I GGTCTC 1 cut(s) 1052
Eco47I GGWCC 2 cut(s) 485, 773
Eco57I CTGAAG 2 cut(s) 298, 379
EcoO109I RGGNCCY 2 cut(s) 176, 1300
EcoRI GAATTC 2 cut(s) 349, 423
EcoRII CCWGG 1 cut(s) 571
EcoT14I CCWWGG 3 cut(s) 172, 1062, 1356
EcoT22I ATGCAT 1 cut(s) 50
ErhI CCWWGG 3 cut(s) 172, 1062, 1356
FaeI CATG 7 cut(s) 41, 52, 391, 469, 725, 931, 1192
FalI AAGNNNNNCTT 2 cut(s) 1340, 1372
FaqI GGGAC 1 cut(s) 259
FatI CATG 7 cut(s) 37, 48, 387, 465, 721, 927, 1188
FauNDI CATATG 1 cut(s) 267
FbaI TGATCA 1 cut(s) 793
Fnu4HI GCNGC 4 cut(s) 258, 408, 919, 941
FokI GGATG 3 cut(s) 587, 1161, 1393
Fsp4HI GCNGC 4 cut(s) 258, 408, 919, 941
FspBI CTAG 3 cut(s) 92, 371, 450
GluI GCNGC 4 cut(s) 258, 408, 919, 941
GsaI CCCAGC 3 cut(s) 62, 806, 1121
GsuI CTGGAG 1 cut(s) 222
HaeIII GGCC 8 cut(s) 69, 177, 195, 231, 321, 983, 1201, 1302
HapII CCGG 2 cut(s) 359, 428
Hin1II CATG 7 cut(s) 41, 52, 391, 469, 725, 931, 1192
HincII GTYRAC 2 cut(s) 136, 1435
HindII GTYRAC 2 cut(s) 136, 1435
HindIII AAGCTT 1 cut(s) 607
HinfI GANTC 2 cut(s) 640, 875
HpaI GTTAAC 1 cut(s) 1435
HpaII CCGG 2 cut(s) 359, 428
HphI GGTGA 1 cut(s) 1286
Hpy166II GTNNAC 3 cut(s) 136, 843, 1435
Hpy188I TCNGA 7 cut(s) 28, 317, 379, 422, 590, 937, 1127
Hpy188III TCNNGA 7 cut(s) 388, 401, 644, 928, 1097, 1108, 1135
Hpy8I GTNNAC 3 cut(s) 136, 843, 1435
HpyAV CCTTC 5 cut(s) 322, 332, 472, 589, 1316
HpyCH4III ACNGT 3 cut(s) 556, 925, 1145
HpyCH4IV ACGT 2 cut(s) 704, 1278
HpyCH4V TGCA 9 cut(s) 41, 48, 407, 737, 768, 968, 1040, 1230, 1242
HpyF10VI GCNNNNNNNGC 4 cut(s) 254, 352, 680, 1382
HpyF3I CTNAG 5 cut(s) 25, 141, 715, 936, 948
HpySE526I ACGT 2 cut(s) 704, 1278
Hsp92II CATG 7 cut(s) 41, 52, 391, 469, 725, 931, 1192
Ksp22I TGATCA 1 cut(s) 793
KspAI GTTAAC 1 cut(s) 1435
Kzo9I GATC 7 cut(s) 219, 793, 830, 1006, 1191, 1403, 1423
Lsp1109I GCAGC 4 cut(s) 244, 419, 930, 952
LweI GCATC 6 cut(s) 235, 393, 394, 511, 700, 724
MaeI CTAG 3 cut(s) 92, 371, 450
MaeII ACGT 2 cut(s) 704, 1278
MaeIII GTNAC 2 cut(s) 361, 1274
MalI GATC 7 cut(s) 221, 795, 832, 1008, 1193, 1405, 1425
MboI GATC 7 cut(s) 219, 793, 830, 1006, 1191, 1403, 1423
MboII GAAGA 5 cut(s) 333, 854, 1067, 1360, 1378
MfeI CAATTG 1 cut(s) 1225
MhlI GDGCHC 2 cut(s) 1094, 1188
MluCI AATT 8 cut(s) 349, 423, 815, 889, 907, 1225, 1340, 1459
MlyI GAGTC 1 cut(s) 869
MmeI TCCRAC 1 cut(s) 1242
Mph1103I ATGCAT 1 cut(s) 50
MseI TTAA 4 cut(s) 165, 516, 1281, 1434
MslI CAYNNNNRTG 1 cut(s) 926
MspA1I CMGCKG 1 cut(s) 242
MspI CCGG 2 cut(s) 359, 428
MspR9I CCNGG 2 cut(s) 429, 573
MunI CAATTG 1 cut(s) 1225
MvaI CCWGG 1 cut(s) 573
MwoI GCNNNNNNNGC 4 cut(s) 254, 352, 680, 1382
NciI CCSGG 1 cut(s) 429
NdeI CATATG 1 cut(s) 267
NdeII GATC 7 cut(s) 219, 793, 830, 1006, 1191, 1403, 1423
NlaIII CATG 7 cut(s) 41, 52, 391, 469, 725, 931, 1192
NlaIV GGNNCC 4 cut(s) 178, 775, 1091, 1185
NmuCI GTSAC 1 cut(s) 1274
NsiI ATGCAT 1 cut(s) 50
NspI RCATGY 2 cut(s) 41, 52
NspV TTCGAA 1 cut(s) 329
PaeI GCATGC 1 cut(s) 52
PagI TCATGA 2 cut(s) 387, 927
PceI AGGCCT 2 cut(s) 321, 983
PfeI GAWTC 1 cut(s) 640
PkrI GCNGC 4 cut(s) 259, 409, 920, 942
PleI GAGTC 1 cut(s) 869
PpsI GAGTC 1 cut(s) 869
Psp6I CCWGG 1 cut(s) 571
PspFI CCCAGC 3 cut(s) 58, 802, 1117
PspGI CCWGG 1 cut(s) 571
PspN4I GGNNCC 4 cut(s) 178, 775, 1091, 1185
PspPI GGNCC 4 cut(s) 176, 485, 773, 1300
PvuII CAGCTG 1 cut(s) 242
RseI CAYNNNNRTG 1 cut(s) 926
SaqAI TTAA 4 cut(s) 165, 516, 1281, 1434
SatI GCNGC 4 cut(s) 258, 408, 919, 941
Sau3AI GATC 7 cut(s) 219, 793, 830, 1006, 1191, 1403, 1423
Sau96I GGNCC 4 cut(s) 176, 485, 773, 1300
SchI GAGTC 1 cut(s) 869
ScrFI CCNGG 2 cut(s) 429, 573
SduI GDGCHC 2 cut(s) 1094, 1188
SfaNI GCATC 6 cut(s) 235, 393, 394, 511, 700, 724
SfuI TTCGAA 1 cut(s) 329
SinI GGWCC 2 cut(s) 485, 773
SmiMI CAYNNNNRTG 1 cut(s) 926
SmlI CTYRAG 2 cut(s) 63, 1095
SmoI CTYRAG 2 cut(s) 63, 1095
SpeI ACTAGT 1 cut(s) 449
SphI GCATGC 1 cut(s) 52
Sse9I AATT 8 cut(s) 349, 423, 815, 889, 907, 1225, 1340, 1459
SseBI AGGCCT 2 cut(s) 321, 983
SspMI CTAG 3 cut(s) 92, 371, 450
StuI AGGCCT 2 cut(s) 321, 983
StyD4I CCNGG 2 cut(s) 427, 571
StyI CCWWGG 3 cut(s) 172, 1062, 1356
TaaI ACNGT 3 cut(s) 556, 925, 1145
TaiI ACGT 2 cut(s) 707, 1281
TaqI TCGA 3 cut(s) 329, 402, 743
TasI AATT 8 cut(s) 349, 423, 815, 889, 907, 1225, 1340, 1459
TfiI GAWTC 1 cut(s) 640
Tru1I TTAA 4 cut(s) 165, 516, 1281, 1434
Tru9I TTAA 4 cut(s) 165, 516, 1281, 1434
TscAI CASTG 4 cut(s) 145, 305, 1148, 1249
TseFI GTSAC 1 cut(s) 1274
TseI GCWGC 4 cut(s) 257, 407, 918, 940
Tsp45I GTSAC 1 cut(s) 1274
TspDTI ATGAA 6 cut(s) 404, 454, 593, 601, 640, 738
TspRI CASTG 4 cut(s) 145, 305, 1148, 1249
VpaK11BI GGWCC 2 cut(s) 485, 773
XapI RAATTY 2 cut(s) 349, 423
XceI RCATGY 2 cut(s) 41, 52
XspI CTAG 3 cut(s) 92, 371, 450
Zsp2I ATGCAT 1 cut(s) 50
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.