FvH4_5g36970

Belongs to the UDP-glycosyltransferase family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb5
OG0000553
Physical Location & Seq
Reverse (-)
27056110 .. 27059120
3011 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_5g36970.t1

Sequence Viewer

Length: 1467 bp
ATGGGTTCCAATGCTTTGATGGTAGAGACTAATAAGCCGCATGCTGTATGCATCCCTTACCCAGCTCAGGGGCACATAAACCCTATGCTCAAGTTAGCCAAGCTCCTCCACCACAAGGGCTTCCACGTCACCTTCGTCAACAGCGAGTACAACCACCGGCGCCTCCTCAACTCCCGAGGACCCAACGCCCTCGACGGCCTCCCTTCTTTTCAGTTCAAGACCATCCCCGACGGGCTGCCTCCTACCGACACGAATGCCACGCAGGACATACCGTCACTTTGCGAGTCCACAAGGAAGTACTGCCTCCCGCACTTCAGGAAGCTTCTTGAGGAGGTGAACTCTGAGGAGAACTCGCCGCCGGTGAGCTGCGTGGTTTCCGATGGTGTCATGAGCTTTACTCTTGACGCGGCCGAGGAACTTGGGGTGCCGGAAGTGCTTTTCTGGACTACTAGTGCTTGTGGATTCATGGCTTACGTTCATTATAAGCATCTTATTGAAAAGGGTTACACTCCTCTTAAAGATGCAAGTTACTTAACAAACGGGTACTTGGACACCGTGATTGACTGGATACCAGGCATGAAAGGTATCCGTTTGAAAGATATCCCAACCTTCATCAGAACCACAGACACAAACGCCCTGATGGTCGATTTCGTTCTCCATGAAACCGAACGAGCAGCTAAGAAAGCCTCCGCCATCATCTTAAACACATTCGACGACTTAGAACACGATGTCCTCGAAGCATTTGCAGCTCTCCTACCCCCAGCAGTCTACTCCATCGGACCCCTTAGCCTACAACTCAACCAAATCCCACCCGGCAGTGAGTTGCAGACCTTGAAGTCGAATCTATGGAAGGAAGAGTCAGAGTGTCTGGAATGGCTAGACTCCAAAGACCCCGACTCTGTAGTGTACGTCAACTTCGGAAGCATCACAGTGATGACCGAAACTCAGCTGATCGAGTTCGCTTGGGGGCTCGCAAACAGCAAGAAGACGTTTCTCTGGGTGATCAGGCCTGACCTAGTTGGGGGATCATCGGCTGTGGTGCCGGCAGAGTTTGTAGAAGAGACGAGAGAAAGAAGTATGCTGGCTACTTGGTGCCCTCAGGAAGAAGTCCTGAGACACCCGGCCGTCGGAGGATTCCTTACTCACAGCGGGTGGAACTCAACTCTCGAGAGTATCTGCGGCGGAGTGCCGATGATCTGCTGGCCTTTCTTCGCCGAGCAACAAACCAACTGCAGGTTCTGTTGCAAAGAATGGGGGATAGGGATGGAGATTGAGGGCGATCCTAAGAGAGATTACGTAGAAGGACTTGTGAGGAAGTTGATGGAGGGAGAGGAAGGGAAAGAGATGAAGAAGAAAGCTCTGGAATGGAAGAGGTTGGCAATGGAGGCAGCCACTGGTCCTAAGGGTTCGTCGTTTGTGAACTTGGACAAGATGGTCAACCAAGTGCTTCTAGCTCCCAGAAAATAA

Protein Analysis

489

Amino Acids

54.51

Weight (kDa)

5.42

Isoelectric Point (pI)

39.54

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Glyco_transf_N PF26168 16 - 151 9.1e-08 Glycosyltransferase, N-terminal domain
UDPGT PF00201 210 - 421 2.8e-28 UDP-glucoronosyl and UDP-glucosyl transferase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000553)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G22340 AT1G22360 AT1G22360 AT1G22370 AT1G22370 AT1G22380 AT1G22400 AT1G78270
fragaria_vesca FvH4_5g36970 FvH4_5g36972 FvH4_5g36980 FvH4_5g37000 FvH4_5g37020 FvH4_5g37020 FvH4_5g37020 FvH4_5g37020 FvH4_5g37020 FvH4_5g37020
malus_domestica MD08G1185000.v1.1 MD08G1185500.v1.1 MD08G1185600.v1.1 MD08G1185700.v1.1 MD15G1371800.v1.1
prunus_persica Prupe.1G519500_v2.0.a1 Prupe.1G519600_v2.0.a1 Prupe.1G519700_v2.0.a1 Prupe.1G519800_v2.0.a1 Prupe.1G519900_v2.0.a1 Prupe.1G520000_v2.0.a1 Prupe.1G520100_v2.0.a1 Prupe.1G520200_v2.0.a1 Prupe.1G520300_v2.0.a1 Prupe.1G520400_v2.0.a1 Prupe.1G520400_v2.0.a1
pyrus_communis pycom08g15890 pycom08g15930 pycom15g33310
rosa_chinensis RchiOBHm_Chr7g0231031 RchiOBHm_Chr7g0231091 RchiOBHm_Chr7g0243731 RchiOBHm_Chr7g0243761 RchiOBHm_Chr7g0243781 RchiOBHm_Chr7g0243791 RchiOBHm_Chr7g0243821
rosa_laevigata RLG00000000832 RLG00000000834 RLG00000000835 RLG00000000836 RLG00000000837 RLG00000000838 RLG00000001435 RLG00000001436 RLG00000001650
rosa_multiflora Rmu_co8142950.1_g000001 Rmu_sc0000780.1_g000001 Rmu_sc0000780.1_g000003 Rmu_sc0000780.1_g000006 Rmu_sc0000780.1_g000007 Rmu_sc0012403.1_g000014
rosa_roxburghii Rroxscaffold_3G00221740 Rroxscaffold_3G00221770 Rroxscaffold_3G00221810 Rroxscaffold_3G00221820
rosa_rugosa Rorug07G0264200 Rorug07G0264400 Rorug07G0321000 Rorug07G0321300 Rorug07G0321600 Rorug07G0321700 Rorug07G0321800
rosa_samantha Rh7CG437000 Rh7CG437300 Rh7CG493400 Rh7CG493800 Rh7CG494000 Rh7CG494500
rosa_wichuraiana Rw7G034550 Rw7G039670 Rw7G039680 Rw7G039690 Rw7G039700 Rw7G039740 Rw7G039750

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 483
AasI GACNNNNNNGTC 2 cut(s) 835, 1433
Acc36I ACCTGC 1 cut(s) 1224
AccB1I GGYRCC 4 cut(s) 159, 424, 1039, 1092
AccI GTMKAC 1 cut(s) 768
AccII CGCG 1 cut(s) 407
AciI CCGC 8 cut(s) 38, 308, 356, 407, 690, 1149, 1179, 1182
AclWI GGATC 2 cut(s) 1033, 1274
AcoI YGGCCR 2 cut(s) 408, 1122
AcuI CTGAAG 1 cut(s) 298
AcyI GRCGYC 1 cut(s) 160
AfaI GTAC 4 cut(s) 149, 299, 545, 908
AfiI CCNNNNNNNGG 6 cut(s) 67, 68, 115, 1021, 1127, 1233
AgsI TTSAA 4 cut(s) 217, 497, 595, 835
AhdI GACNNNNNGTC 1 cut(s) 271
AhlI ACTAGT 1 cut(s) 449
AjiI CACGTC 1 cut(s) 127
AjnI CCWGG 1 cut(s) 571
AjuI GAANNNNNNNTTGG 2 cut(s) 1220, 1252
AloI GAACNNNNNNTCC 2 cut(s) 714, 746
Alw26I GTCTC 3 cut(s) 20, 1055, 1108
AlwI GGATC 2 cut(s) 1033, 1274
AlwNI CAGNNNCTG 2 cut(s) 1239, 1394
Ama87I CYCGRG 2 cut(s) 174, 1166
AoxI GGCC 5 cut(s) 196, 408, 1007, 1122, 1202
ApeKI GCWGC 5 cut(s) 235, 366, 674, 746, 1388
AspLEI GCGC 1 cut(s) 162
AspS9I GGNCC 3 cut(s) 179, 779, 1397
AsuC2I CCSGG 2 cut(s) 813, 1121
AsuHPI GGTGA 4 cut(s) 121, 346, 373, 1012
AvaI CYCGRG 2 cut(s) 174, 1166
AvaII GGWCC 3 cut(s) 179, 779, 1397
AxyI CCTNAGG 2 cut(s) 1098, 1401
BaeGI GKGCMC 2 cut(s) 75, 1097
BanI GGYRCC 4 cut(s) 159, 424, 1039, 1092
BanII GRGCYC 1 cut(s) 972
BarI GAAGNNNNNNTAC 2 cut(s) 899, 931
BbsI GAAGAC 1 cut(s) 992
BbvI GCAGC 5 cut(s) 222, 353, 686, 758, 1400
BccI CCATC 9 cut(s) 13, 230, 374, 634, 701, 782, 1258, 1315, 1426
BceAI ACGGC 2 cut(s) 211, 1109
BcgI CGANNNNNNTGC 4 cut(s) 236, 270, 725, 759
BciT130I CCWGG 1 cut(s) 573
BciVI GTATCC 2 cut(s) 561, 596
BclI TGATCA 1 cut(s) 1002
BcnI CCSGG 2 cut(s) 813, 1121
BcoDI GTCTC 3 cut(s) 20, 1055, 1108
BcuI ACTAGT 1 cut(s) 449
BfaI CTAG 4 cut(s) 450, 878, 1016, 1451
BfmI CTRYAG 2 cut(s) 900, 1231
BfoI RGCGCY 1 cut(s) 163
BfuAI ACCTGC 1 cut(s) 1224
BfuI GTATCC 2 cut(s) 561, 596
BisI GCNGC 9 cut(s) 38, 236, 356, 367, 408, 675, 747, 1180, 1389
BlsI GCNGC 9 cut(s) 39, 237, 357, 368, 409, 676, 748, 1181, 1390
BmcAI AGTACT 1 cut(s) 299
Bme1390I CCNGG 3 cut(s) 573, 813, 1121
Bme18I GGWCC 3 cut(s) 179, 779, 1397
BmeRI GACNNNNNGTC 1 cut(s) 271
BmeT110I CYCGRG 2 cut(s) 174, 1166
BmgBI CACGTC 1 cut(s) 127
BmgT120I GGNCC 3 cut(s) 179, 779, 1397
BmiI GGNNCC 7 cut(s) 7, 161, 181, 426, 781, 1041, 1094
BmrFI CCNGG 3 cut(s) 573, 813, 1121
BmsI GCATC 4 cut(s) 60, 496, 511, 933
BpiI GAAGAC 1 cut(s) 992
BplI GAGNNNNNCTC 6 cut(s) 323, 355, 335, 367, 382, 414
Bpu10I CCTNAGC 2 cut(s) 66, 785
BpuEI CTTGAG 2 cut(s) 74, 347
BpuMI CCSGG 2 cut(s) 813, 1121
BsaAI YACGTR 1 cut(s) 1297
BsaHI GRCGYC 1 cut(s) 160
BsaJI CCNNGG 2 cut(s) 175, 411
Bsc4I CCNNNNNNNGG 6 cut(s) 67, 68, 115, 1021, 1127, 1233
Bse118I RCCGGY 3 cut(s) 156, 358, 1042
Bse1I ACTGG 2 cut(s) 569, 1399
Bse21I CCTNAGG 2 cut(s) 1098, 1401
Bse3DI GCAATG 1 cut(s) 1386
BseBI CCWGG 1 cut(s) 573
BseDI CCNNGG 2 cut(s) 175, 411
BseGI GGATG 3 cut(s) 51, 222, 1269
BseLI CCNNNNNNNGG 6 cut(s) 67, 68, 115, 1021, 1127, 1233
BseMI GCAATG 1 cut(s) 1386
BseMII CTCAG 5 cut(s) 80, 333, 959, 1103, 1112
BseNI ACTGG 2 cut(s) 569, 1399
BseRI GAGGAG 5 cut(s) 95, 155, 344, 359, 501
BseSI GKGCMC 2 cut(s) 75, 1097
BseX3I CGGCCG 2 cut(s) 408, 1122
BseXI GCAGC 5 cut(s) 222, 353, 686, 758, 1400
BseYI CCCAGC 2 cut(s) 61, 760
Bsh1236I CGCG 1 cut(s) 407
Bsh1285I CGRYCG 2 cut(s) 411, 1125
BshFI GGCC 5 cut(s) 198, 410, 1009, 1124, 1204
BshNI GGYRCC 4 cut(s) 159, 424, 1039, 1092
BsiEI CGRYCG 2 cut(s) 411, 1125
BsiHKCI CYCGRG 2 cut(s) 174, 1166
BsiSI CCGG 6 cut(s) 157, 359, 428, 813, 1043, 1121
BslI CCNNNNNNNGG 6 cut(s) 67, 68, 115, 1021, 1127, 1233
BsmAI GTCTC 3 cut(s) 20, 1055, 1108
BsmBI CGTCTC 1 cut(s) 1055
BsmI GAATGC 1 cut(s) 259
BsnI GGCC 5 cut(s) 198, 410, 1009, 1124, 1204
BsoBI CYCGRG 2 cut(s) 174, 1166
Bsp1286I GDGCHC 3 cut(s) 75, 972, 1097
Bsp143I GATC 5 cut(s) 951, 1002, 1025, 1194, 1279
BspACI CCGC 8 cut(s) 38, 308, 356, 407, 690, 1149, 1179, 1182
BspANI GGCC 5 cut(s) 198, 410, 1009, 1124, 1204
BspCNI CTCAG 5 cut(s) 79, 334, 958, 1104, 1111
BspFNI CGCG 1 cut(s) 407
BspHI TCATGA 1 cut(s) 387
BspLI GGNNCC 7 cut(s) 7, 161, 181, 426, 781, 1041, 1094
BspMAI CTGCAG 1 cut(s) 1235
BspMI ACCTGC 1 cut(s) 1224
BspPI GGATC 2 cut(s) 1033, 1274
BspT107I GGYRCC 4 cut(s) 159, 424, 1039, 1092
BsrDI GCAATG 1 cut(s) 1386
BsrFI RCCGGY 3 cut(s) 156, 358, 1042
BsrI ACTGG 2 cut(s) 569, 1399
BssAI RCCGGY 3 cut(s) 156, 358, 1042
BssECI CCNNGG 2 cut(s) 175, 411
BssMI GATC 5 cut(s) 951, 1002, 1025, 1194, 1279
BssNI GRCGYC 1 cut(s) 160
Bst2UI CCWGG 1 cut(s) 573
Bst4CI ACNGT 3 cut(s) 273, 556, 931
Bst6I CTCTTC 3 cut(s) 849, 1053, 1364
BstACI GRCGYC 1 cut(s) 160
BstBAI YACGTR 1 cut(s) 1297
BstC8I GCNNGC 5 cut(s) 42, 972, 1044, 1083, 1202
BstF5I GGATG 3 cut(s) 51, 222, 1269
BstFNI CGCG 1 cut(s) 407
BstH2I RGCGCY 1 cut(s) 163
BstHHI GCGC 1 cut(s) 162
BstKTI GATC 5 cut(s) 954, 1005, 1028, 1197, 1282
BstMAI GTCTC 3 cut(s) 20, 1055, 1108
BstMBI GATC 5 cut(s) 951, 1002, 1025, 1194, 1279
BstMCI CGRYCG 2 cut(s) 411, 1125
BstMWI GCNNNNNNNGC 4 cut(s) 433, 683, 746, 1385
BstNI CCWGG 1 cut(s) 573
BstNSI RCATGY 1 cut(s) 44
BstSCI CCNGG 3 cut(s) 571, 811, 1119
BstSFI CTRYAG 2 cut(s) 900, 1231
BstSLI GKGCMC 2 cut(s) 75, 1097
BstSNI TACGTA 1 cut(s) 1297
BstUI CGCG 1 cut(s) 407
BstV1I GCAGC 5 cut(s) 222, 353, 686, 758, 1400
BstV2I GAAGAC 1 cut(s) 992
BstZI CGGCCG 2 cut(s) 408, 1122
Bsu36I CCTNAGG 2 cut(s) 1098, 1401
BsuI GTATCC 2 cut(s) 561, 596
BsuRI GGCC 5 cut(s) 198, 410, 1009, 1124, 1204
BtrI CACGTC 1 cut(s) 127
BtsCI GGATG 3 cut(s) 51, 222, 1269
BtsI GCAGTG 1 cut(s) 823
BtsIMutI CAGTG 3 cut(s) 823, 936, 1392
BveI ACCTGC 1 cut(s) 1224
Cac8I GCNNGC 5 cut(s) 42, 972, 1044, 1083, 1202
CaiI CAGNNNCTG 2 cut(s) 1239, 1394
CciI TCATGA 1 cut(s) 387
CfoI GCGC 1 cut(s) 162
Cfr10I RCCGGY 3 cut(s) 156, 358, 1042
Cfr13I GGNCC 3 cut(s) 179, 779, 1397
CseI GACGC 1 cut(s) 413
Csp6I GTAC 4 cut(s) 148, 298, 544, 907
CviAII CATG 5 cut(s) 41, 388, 466, 577, 659
CviQI GTAC 4 cut(s) 148, 298, 544, 907
DinI GGCGCC 1 cut(s) 161
DpnI GATC 5 cut(s) 953, 1004, 1027, 1196, 1281
DpnII GATC 5 cut(s) 951, 1002, 1025, 1194, 1279
DrdI GACNNNNNNGTC 2 cut(s) 835, 1433
DriI GACNNNNNGTC 1 cut(s) 271
DseDI GACNNNNNNGTC 2 cut(s) 835, 1433
EaeI YGGCCR 2 cut(s) 408, 1122
EagI CGGCCG 2 cut(s) 408, 1122
Eam1104I CTCTTC 3 cut(s) 849, 1053, 1364
Eam1105I GACNNNNNGTC 1 cut(s) 271
EarI CTCTTC 3 cut(s) 849, 1053, 1364
EciI GGCGGA 2 cut(s) 679, 1197
EclXI CGGCCG 2 cut(s) 408, 1122
Eco105I TACGTA 1 cut(s) 1297
Eco147I AGGCCT 1 cut(s) 1009
Eco24I GRGCYC 1 cut(s) 972
Eco32I GATATC 1 cut(s) 601
Eco47I GGWCC 3 cut(s) 179, 779, 1397
Eco52I CGGCCG 2 cut(s) 408, 1122
Eco57I CTGAAG 1 cut(s) 298
Eco81I CCTNAGG 2 cut(s) 1098, 1401
Eco88I CYCGRG 2 cut(s) 174, 1166
EcoO109I RGGNCCY 1 cut(s) 179
EcoRII CCWGG 1 cut(s) 571
EcoRV GATATC 1 cut(s) 601
EcoT22I ATGCAT 1 cut(s) 53
EcoT38I GRGCYC 1 cut(s) 972
EgeI GGCGCC 1 cut(s) 161
EheI GGCGCC 1 cut(s) 161
Esp3I CGTCTC 1 cut(s) 1055
FaeI CATG 5 cut(s) 44, 391, 469, 580, 662
FatI CATG 5 cut(s) 40, 387, 465, 576, 658
FauI CCCGC 2 cut(s) 315, 1142
FbaI TGATCA 1 cut(s) 1002
FblI GTMKAC 1 cut(s) 768
Fnu4HI GCNGC 9 cut(s) 38, 236, 356, 367, 408, 675, 747, 1180, 1389
FokI GGATG 3 cut(s) 38, 209, 1276
FriOI GRGCYC 1 cut(s) 972
Fsp4HI GCNGC 9 cut(s) 38, 236, 356, 367, 408, 675, 747, 1180, 1389
FspBI CTAG 4 cut(s) 450, 878, 1016, 1451
GlaI GCGC 1 cut(s) 161
GluI GCNGC 9 cut(s) 38, 236, 356, 367, 408, 675, 747, 1180, 1389
GsaI CCCAGC 2 cut(s) 65, 764
HaeII RGCGCY 1 cut(s) 163
HaeIII GGCC 5 cut(s) 198, 410, 1009, 1124, 1204
HapII CCGG 6 cut(s) 157, 359, 428, 813, 1043, 1121
HgaI GACGC 1 cut(s) 413
HhaI GCGC 1 cut(s) 162
Hin1I GRCGYC 1 cut(s) 160
Hin1II CATG 5 cut(s) 44, 391, 469, 580, 662
Hin6I GCGC 1 cut(s) 160
HinP1I GCGC 1 cut(s) 160
HincII GTYRAC 3 cut(s) 139, 913, 1438
HindII GTYRAC 3 cut(s) 139, 913, 1438
HindIII AAGCTT 1 cut(s) 320
HinfI GANTC 7 cut(s) 284, 462, 841, 857, 881, 896, 1134
HpaII CCGG 6 cut(s) 157, 359, 428, 813, 1043, 1121
HphI GGTGA 4 cut(s) 121, 346, 373, 1012
Hpy166II GTNNAC 8 cut(s) 139, 288, 337, 769, 907, 913, 1420, 1438
Hpy188I TCNGA 7 cut(s) 343, 379, 617, 779, 862, 920, 1130
Hpy8I GTNNAC 8 cut(s) 139, 288, 337, 769, 907, 913, 1420, 1438
Hpy99I CGWCG 5 cut(s) 197, 233, 716, 1130, 1414
HpyAV CCTTC 6 cut(s) 142, 213, 619, 844, 1295, 1328
HpyCH4III ACNGT 3 cut(s) 273, 556, 931
HpyCH4IV ACGT 5 cut(s) 126, 474, 909, 989, 1296
HpyCH4V TGCA 6 cut(s) 51, 524, 746, 826, 1233, 1245
HpyF10VI GCNNNNNNNGC 4 cut(s) 433, 683, 746, 1385
HpySE526I ACGT 5 cut(s) 126, 474, 909, 989, 1296
Hsp92I GRCGYC 1 cut(s) 160
Hsp92II CATG 5 cut(s) 44, 391, 469, 580, 662
HspAI GCGC 1 cut(s) 160
KasI GGCGCC 1 cut(s) 159
KroI GCCGGC 1 cut(s) 1042
KroNI GCCGGC 1 cut(s) 1044
Ksp22I TGATCA 1 cut(s) 1002
Kzo9I GATC 5 cut(s) 951, 1002, 1025, 1194, 1279
LmnI GCTCC 2 cut(s) 108, 1459
Lsp1109I GCAGC 5 cut(s) 222, 353, 686, 758, 1400
LweI GCATC 4 cut(s) 60, 496, 511, 933
MaeI CTAG 4 cut(s) 450, 878, 1016, 1451
MaeII ACGT 5 cut(s) 126, 474, 909, 989, 1296
MaeIII GTNAC 4 cut(s) 127, 273, 503, 527
MalI GATC 5 cut(s) 953, 1004, 1027, 1196, 1281
MboI GATC 5 cut(s) 951, 1002, 1025, 1194, 1279
MboII GAAGA 8 cut(s) 866, 997, 1070, 1115, 1201, 1360, 1363, 1381
MhlI GDGCHC 3 cut(s) 75, 972, 1097
Mly113I GGCGCC 1 cut(s) 160
MlyI GAGTC 4 cut(s) 293, 866, 875, 890
MmeI TCCRAC 1 cut(s) 1108
Mph1103I ATGCAT 1 cut(s) 53
MroNI GCCGGC 1 cut(s) 1042
MseI TTAA 3 cut(s) 516, 533, 701
MslI CAYNNNNRTG 2 cut(s) 929, 932
MspA1I CMGCKG 2 cut(s) 949, 1149
MspI CCGG 6 cut(s) 157, 359, 428, 813, 1043, 1121
MspR9I CCNGG 3 cut(s) 573, 813, 1121
Mva1269I GAATGC 1 cut(s) 259
MvaI CCWGG 1 cut(s) 573
MvnI CGCG 1 cut(s) 407
MwoI GCNNNNNNNGC 4 cut(s) 433, 683, 746, 1385
NaeI GCCGGC 1 cut(s) 1044
NarI GGCGCC 1 cut(s) 160
NciI CCSGG 2 cut(s) 813, 1121
NdeII GATC 5 cut(s) 951, 1002, 1025, 1194, 1279
NgoMIV GCCGGC 1 cut(s) 1042
NlaIII CATG 5 cut(s) 44, 391, 469, 580, 662
NlaIV GGNNCC 7 cut(s) 7, 161, 181, 426, 781, 1041, 1094
NmeAIII GCCGAG 2 cut(s) 436, 1240
NmuCI GTSAC 2 cut(s) 127, 273
NsiI ATGCAT 1 cut(s) 53
NspI RCATGY 1 cut(s) 44
PaeI GCATGC 1 cut(s) 44
PaeR7I CTCGAG 1 cut(s) 1166
PagI TCATGA 1 cut(s) 387
PceI AGGCCT 1 cut(s) 1009
PcsI WCGNNNNNNNCGW 3 cut(s) 132, 141, 732
PctI GAATGC 1 cut(s) 259
PdiI GCCGGC 1 cut(s) 1044
PfeI GAWTC 3 cut(s) 462, 841, 1134
PkrI GCNGC 9 cut(s) 39, 237, 357, 368, 409, 676, 748, 1181, 1390
PleI GAGTC 4 cut(s) 292, 865, 875, 890
PluTI GGCGCC 1 cut(s) 163
PpsI GAGTC 4 cut(s) 292, 865, 875, 890
Ppu21I YACGTR 1 cut(s) 1297
PpuMI RGGWCCY 1 cut(s) 179
PsiI TTATAA 1 cut(s) 483
Psp5II RGGWCCY 1 cut(s) 179
Psp6I CCWGG 1 cut(s) 571
PspFI CCCAGC 2 cut(s) 61, 760
PspGI CCWGG 1 cut(s) 571
PspN4I GGNNCC 7 cut(s) 7, 161, 181, 426, 781, 1041, 1094
PspPI GGNCC 3 cut(s) 179, 779, 1397
PspPPI RGGWCCY 1 cut(s) 179
PstI CTGCAG 1 cut(s) 1235
PstNI CAGNNNCTG 2 cut(s) 1239, 1394
PvuII CAGCTG 1 cut(s) 949
RsaI GTAC 4 cut(s) 149, 299, 545, 908
RsaNI GTAC 4 cut(s) 148, 298, 544, 907
RseI CAYNNNNRTG 2 cut(s) 929, 932
SaqAI TTAA 3 cut(s) 516, 533, 701
SatI GCNGC 9 cut(s) 38, 236, 356, 367, 408, 675, 747, 1180, 1389
Sau3AI GATC 5 cut(s) 951, 1002, 1025, 1194, 1279
Sau96I GGNCC 3 cut(s) 179, 779, 1397
ScaI AGTACT 1 cut(s) 299
SchI GAGTC 4 cut(s) 293, 866, 875, 890
ScrFI CCNGG 3 cut(s) 573, 813, 1121
SduI GDGCHC 3 cut(s) 75, 972, 1097
SfaNI GCATC 4 cut(s) 60, 496, 511, 933
SfcI CTRYAG 2 cut(s) 900, 1231
SfoI GGCGCC 1 cut(s) 161
Sfr274I CTCGAG 1 cut(s) 1166
SgrAI CRCCGGYG 2 cut(s) 156, 358
SinI GGWCC 3 cut(s) 179, 779, 1397
SlaI CTCGAG 1 cut(s) 1166
SmiMI CAYNNNNRTG 2 cut(s) 929, 932
SmlI CTYRAG 3 cut(s) 89, 326, 1166
SmoI CTYRAG 3 cut(s) 89, 326, 1166
SnaBI TACGTA 1 cut(s) 1297
SpeI ACTAGT 1 cut(s) 449
SphI GCATGC 1 cut(s) 44
SseBI AGGCCT 1 cut(s) 1009
SsiI CCGC 8 cut(s) 38, 308, 356, 407, 690, 1149, 1179, 1182
SspDI GGCGCC 1 cut(s) 159
SspMI CTAG 4 cut(s) 450, 878, 1016, 1451
StuI AGGCCT 1 cut(s) 1009
StyD4I CCNGG 3 cut(s) 571, 811, 1119
TaaI ACNGT 3 cut(s) 273, 556, 931
TaiI ACGT 5 cut(s) 129, 477, 912, 992, 1299
TaqI TCGA 7 cut(s) 192, 645, 711, 735, 839, 954, 1167
TaqII GACCGA 1 cut(s) 953
TatI WGTACW 2 cut(s) 147, 297
TauI GCSGC 4 cut(s) 40, 358, 410, 1182
TfiI GAWTC 3 cut(s) 462, 841, 1134
Tru1I TTAA 3 cut(s) 516, 533, 701
Tru9I TTAA 3 cut(s) 516, 533, 701
TscAI CASTG 3 cut(s) 823, 936, 1399
TseFI GTSAC 2 cut(s) 127, 273
TseI GCWGC 5 cut(s) 235, 366, 674, 746, 1388
Tsp45I GTSAC 2 cut(s) 127, 273
TspDTI ATGAA 6 cut(s) 454, 467, 593, 601, 675, 1361
TspGWI ACGGA 1 cut(s) 578
TspRI CASTG 3 cut(s) 823, 936, 1399
VpaK11BI GGWCC 3 cut(s) 179, 779, 1397
XceI RCATGY 1 cut(s) 44
XcmI CCANNNNNNNNNTGG 1 cut(s) 16
XhoI CTCGAG 1 cut(s) 1166
XmiI GTMKAC 1 cut(s) 768
XspI CTAG 4 cut(s) 450, 878, 1016, 1451
ZrmI AGTACT 1 cut(s) 299
Zsp2I ATGCAT 1 cut(s) 53
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.