RchiOBHm_Chr7g0243781

Belongs to the UDP-glycosyltransferase family

Basic Information

Type: gene
Biological Identity
rosa_chinensis
7
Physical Location & Seq
Forward (+)
70010045 .. 70011890
1846 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ21849

Sequence Viewer

Length: 1380 bp
ATGGATTGCATTGCCTTAACGTCGCAGAAGCCACATGCAGTCTGCATCCCATTCCCAGCTCAAGGCCACATAAACCCAATGCTAAAATTGGCTAAACTCCTCCACTTCAAAGGTTTTCATATAACCTTTGTCAACACAGAGTTCATACATAAACGCCTGCTGAAATCTCAAGGTCCAAATTCTCTTGATGGTTTCCCTTCCTTTAGATTCGAGACAATTCCAGATGGTCTTCCTCCAACTGATGCGAATGTTGCCACCCAACACATGCCATCGCTATGCGAATCCACAAGGAAAAACTGCCTAGCACCCTTCAGAGACCTTCTTTTGAAGCTCAATTCTTCACCAAATTCGCCTCCAGTAACCTGCATAGTTGCTGATGGTATCATGAACTTCACTCTTGATGCAGCCCAAGAACTAGGCCTTCCTGAAGTTATTTTCTGGACAACAAGTGCCTGTGGTTTCATGGGCTACCTTCAATATCGCAATCTCATTGAAAAGGGTTTAGTTCCTCTTAAAGACGACAGTTATTTCACAAATGGGTATTTGGATACAGTAATAGATTGGATTCCAGGAATGAAAGGAATCCAATTGAAGGATATCCCAACCTTCATTAGAACCACTGACCCAAATGACCCCATTCTGCACGTGATTTTGCACGATACAGAACGAGTTCAAAGAGCTTCTGCTATCATTTTGAATACGTTTGATGCCTTAGAGCACGAAGTTCTCGAGGCAATTTCGCATTTGCTACCACCTATATACTCCATTGGACCCCTGTACCTACAACTTAATCAGATACCAGCTGAAGATAACACCTTCAAGTTAACTGGAGCAAGTCTATGGAGAGAAGAACCAGACTGTTTTGAATGGCTTGACTCTAAAGAACCTAGTTCTGTGATTTATGTCAACTTTGGAAGCAGCACAGTCATGACAGATGAGCAGCTAATTGAATTCACTTGGGGCCTTGCAGCAACACCTTTTTTTGGGGGTCTACTGGCAAGCTGGTGCTGTCAAGGACAAGTCTTGAGCCATCCAGCTATAGGAGGGTTCTTGACGCATAGTGGGTGGAACTCAACCATTGAAAGTGTGTGCGGTGGAGTGCCGATGATCTGTTGGCCCTTCAATGGCGAGCAACAAACCAACTGTAGGTACTGTTGCAAAGAATGGGGCATAGGCATGGAGATGGAGGGTGATGTTAAAAGAAACTACATAGAAAGCCTTGTGAGGAAGTTAATGCAGGAAAAGGAAGGAAAAGAGATGAGGAAGAAATCCATGGAATGGAAGAAGTTGGCAGAGAAGGCCATTACAGGTCCTCATGGATCATCTTTCTTGGATTTGGACAAAATGGTTAACCAGGTGCTGCTATCTCCAAGAGATTAG

Protein Analysis

459

Amino Acids

51.43

Weight (kDa)

5.5

Isoelectric Point (pI)

34.8

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Glyco_transf_N PF26168 14 - 144 1.4e-08 Glycosyltransferase, N-terminal domain
UDPGT PF00201 331 - 419 9.3e-17 UDP-glucoronosyl and UDP-glucosyl transferase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000553)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G22340 AT1G22360 AT1G22360 AT1G22370 AT1G22370 AT1G22380 AT1G22400 AT1G78270
fragaria_vesca FvH4_5g36970 FvH4_5g36972 FvH4_5g36980 FvH4_5g37000 FvH4_5g37020 FvH4_5g37020 FvH4_5g37020 FvH4_5g37020 FvH4_5g37020 FvH4_5g37020
malus_domestica MD08G1185000.v1.1 MD08G1185500.v1.1 MD08G1185600.v1.1 MD08G1185700.v1.1 MD15G1371800.v1.1
prunus_persica Prupe.1G519500_v2.0.a1 Prupe.1G519600_v2.0.a1 Prupe.1G519700_v2.0.a1 Prupe.1G519800_v2.0.a1 Prupe.1G519900_v2.0.a1 Prupe.1G520000_v2.0.a1 Prupe.1G520100_v2.0.a1 Prupe.1G520200_v2.0.a1 Prupe.1G520300_v2.0.a1 Prupe.1G520400_v2.0.a1 Prupe.1G520400_v2.0.a1
pyrus_communis pycom08g15890 pycom08g15930 pycom15g33310
rosa_chinensis RchiOBHm_Chr7g0231031 RchiOBHm_Chr7g0231091 RchiOBHm_Chr7g0243731 RchiOBHm_Chr7g0243761 RchiOBHm_Chr7g0243781 RchiOBHm_Chr7g0243791 RchiOBHm_Chr7g0243821
rosa_laevigata RLG00000000832 RLG00000000834 RLG00000000835 RLG00000000836 RLG00000000837 RLG00000000838 RLG00000001435 RLG00000001436 RLG00000001650
rosa_multiflora Rmu_co8142950.1_g000001 Rmu_sc0000780.1_g000001 Rmu_sc0000780.1_g000003 Rmu_sc0000780.1_g000006 Rmu_sc0000780.1_g000007 Rmu_sc0012403.1_g000014
rosa_roxburghii Rroxscaffold_3G00221740 Rroxscaffold_3G00221770 Rroxscaffold_3G00221810 Rroxscaffold_3G00221820
rosa_rugosa Rorug07G0264200 Rorug07G0264400 Rorug07G0321000 Rorug07G0321300 Rorug07G0321600 Rorug07G0321700 Rorug07G0321800
rosa_samantha Rh7CG437000 Rh7CG437300 Rh7CG493400 Rh7CG493800 Rh7CG494000 Rh7CG494500
rosa_wichuraiana Rw7G034550 Rw7G039670 Rw7G039680 Rw7G039690 Rw7G039700 Rw7G039740 Rw7G039750

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 371
AccB7I CCANNNNNTGG 1 cut(s) 1278
AccI GTMKAC 1 cut(s) 991
AciI CCGC 1 cut(s) 1092
AclWI GGATC 1 cut(s) 1327
AcsI RAATTY 3 cut(s) 178, 346, 950
AcuI CTGAAG 3 cut(s) 295, 447, 825
AcvI CACGTG 1 cut(s) 646
AfaI GTAC 2 cut(s) 779, 1151
AfiI CCNNNNNNNGG 7 cut(s) 62, 592, 983, 1040, 1124, 1146, 1278
AjnI CCWGG 2 cut(s) 568, 1353
AluBI AGCT 7 cut(s) 59, 331, 680, 803, 943, 1002, 1037
AluI AGCT 7 cut(s) 59, 331, 680, 803, 943, 1002, 1037
Alw21I GWGCWC 1 cut(s) 720
Alw26I GTCTC 2 cut(s) 206, 309
AlwI GGATC 1 cut(s) 1327
AlwNI CAGNNNCTG 1 cut(s) 1360
Ama87I CYCGRG 1 cut(s) 728
AoxI GGCC 5 cut(s) 64, 418, 961, 1115, 1299
ApeKI GCWGC 5 cut(s) 404, 918, 940, 968, 1360
ApoI RAATTY 3 cut(s) 178, 346, 950
Asp700I GAANNNNTTC 1 cut(s) 669
AspS9I GGNCC 5 cut(s) 173, 770, 961, 1116, 1310
AsuHPI GGTGA 2 cut(s) 333, 1202
AvaI CYCGRG 1 cut(s) 728
AvaII GGWCC 3 cut(s) 173, 770, 1310
BaeI ACNNNNGTAYC 2 cut(s) 761, 794
BbrPI CACGTG 1 cut(s) 646
BbsI GAAGAC 1 cut(s) 221
Bbv12I GWGCWC 1 cut(s) 720
BbvI GCAGC 5 cut(s) 416, 930, 952, 980, 1347
BccI CCATC 6 cut(s) 182, 218, 277, 371, 1038, 1177
BciT130I CCWGG 2 cut(s) 570, 1355
BciVI GTATCC 1 cut(s) 541
BcoDI GTCTC 2 cut(s) 206, 309
BfaI CTAG 3 cut(s) 302, 416, 888
BfmI CTRYAG 2 cut(s) 1038, 1144
BfuAI ACCTGC 1 cut(s) 371
BfuI GTATCC 1 cut(s) 541
BisI GCNGC 5 cut(s) 405, 919, 941, 969, 1361
BlsI GCNGC 5 cut(s) 406, 920, 942, 970, 1362
Bme1390I CCNGG 2 cut(s) 570, 1355
Bme18I GGWCC 3 cut(s) 173, 770, 1310
BmeT110I CYCGRG 1 cut(s) 728
BmgT120I GGNCC 5 cut(s) 173, 770, 961, 1116, 1310
BmiI GGNNCC 2 cut(s) 772, 962
BmrFI CCNGG 2 cut(s) 570, 1355
BmsI GCATC 4 cut(s) 54, 232, 391, 697
BpiI GAAGAC 1 cut(s) 221
BpmI CTGGAG 2 cut(s) 339, 849
BpuEI CTTGAG 3 cut(s) 45, 153, 1045
BsaAI YACGTR 1 cut(s) 646
BsaI GGTCTC 1 cut(s) 309
BsaJI CCNNGG 1 cut(s) 1272
Bsc4I CCNNNNNNNGG 7 cut(s) 62, 592, 983, 1040, 1124, 1146, 1278
Bse1I ACTGG 3 cut(s) 356, 832, 999
Bse3DI GCAATG 1 cut(s) 9
BseBI CCWGG 2 cut(s) 570, 1355
BseDI CCNNGG 1 cut(s) 1272
BseGI GGATG 2 cut(s) 45, 1030
BseLI CCNNNNNNNGG 7 cut(s) 62, 592, 983, 1040, 1124, 1146, 1278
BseMI GCAATG 1 cut(s) 9
BseNI ACTGG 3 cut(s) 356, 832, 999
BseRI GAGGAG 1 cut(s) 89
BseXI GCAGC 5 cut(s) 416, 930, 952, 980, 1347
BseYI CCCAGC 1 cut(s) 55
BsgI GTGCAG 1 cut(s) 626
BshFI GGCC 5 cut(s) 66, 420, 963, 1117, 1301
BsiHKAI GWGCWC 1 cut(s) 720
BsiHKCI CYCGRG 1 cut(s) 728
BslI CCNNNNNNNGG 7 cut(s) 62, 592, 983, 1040, 1124, 1146, 1278
BsmAI GTCTC 2 cut(s) 206, 309
BsnI GGCC 5 cut(s) 66, 420, 963, 1117, 1301
Bso31I GGTCTC 1 cut(s) 309
BsoBI CYCGRG 1 cut(s) 728
Bsp1286I GDGCHC 1 cut(s) 720
Bsp143I GATC 2 cut(s) 1107, 1319
Bsp19I CCATGG 1 cut(s) 1272
BspACI CCGC 1 cut(s) 1092
BspANI GGCC 5 cut(s) 66, 420, 963, 1117, 1301
BspHI TCATGA 2 cut(s) 384, 927
BspLI GGNNCC 2 cut(s) 772, 962
BspMI ACCTGC 1 cut(s) 371
BspPI GGATC 1 cut(s) 1327
BspTNI GGTCTC 1 cut(s) 309
BsrDI GCAATG 1 cut(s) 9
BsrI ACTGG 3 cut(s) 356, 832, 999
BssECI CCNNGG 1 cut(s) 1272
BssMI GATC 2 cut(s) 1107, 1319
BssT1I CCWWGG 1 cut(s) 1272
Bst2UI CCWGG 2 cut(s) 570, 1355
Bst4CI ACNGT 6 cut(s) 524, 553, 860, 925, 1145, 1154
BstBAI YACGTR 1 cut(s) 646
BstC8I GCNNGC 3 cut(s) 158, 1000, 1130
BstDEI CTNAG 1 cut(s) 712
BstDSI CCRYGG 1 cut(s) 1272
BstF5I GGATG 2 cut(s) 45, 1030
BstKTI GATC 2 cut(s) 1110, 1322
BstMAI GTCTC 2 cut(s) 206, 309
BstMBI GATC 2 cut(s) 1107, 1319
BstMWI GCNNNNNNNGC 2 cut(s) 251, 1298
BstNI CCWGG 2 cut(s) 570, 1355
BstNSI RCATGY 2 cut(s) 38, 268
BstSCI CCNGG 2 cut(s) 568, 1353
BstSFI CTRYAG 2 cut(s) 1038, 1144
BstV1I GCAGC 5 cut(s) 416, 930, 952, 980, 1347
BstV2I GAAGAC 1 cut(s) 221
BsuI GTATCC 1 cut(s) 541
BsuRI GGCC 5 cut(s) 66, 420, 963, 1117, 1301
BtgI CCRYGG 1 cut(s) 1272
BtgZI GCGATG 1 cut(s) 255
BtsCI GGATG 2 cut(s) 45, 1030
BtsIMutI CAGTG 1 cut(s) 618
BveI ACCTGC 1 cut(s) 371
Cac8I GCNNGC 3 cut(s) 158, 1000, 1130
CaiI CAGNNNCTG 1 cut(s) 1360
CciI TCATGA 2 cut(s) 384, 927
Cfr13I GGNCC 5 cut(s) 173, 770, 961, 1116, 1310
CseI GACGC 1 cut(s) 1063
CsiI ACCWGGT 1 cut(s) 1353
Csp6I GTAC 2 cut(s) 778, 1150
CviAII CATG 8 cut(s) 35, 265, 385, 463, 928, 1177, 1273, 1316
CviQI GTAC 2 cut(s) 778, 1150
DdeI CTNAG 1 cut(s) 712
DpnI GATC 2 cut(s) 1109, 1321
DpnII GATC 2 cut(s) 1107, 1319
Eco130I CCWWGG 1 cut(s) 1272
Eco147I AGGCCT 1 cut(s) 420
Eco31I GGTCTC 1 cut(s) 309
Eco32I GATATC 1 cut(s) 598
Eco47I GGWCC 3 cut(s) 173, 770, 1310
Eco57I CTGAAG 3 cut(s) 295, 447, 825
Eco72I CACGTG 1 cut(s) 646
Eco88I CYCGRG 1 cut(s) 728
EcoO109I RGGNCCY 2 cut(s) 961, 1310
EcoRI GAATTC 1 cut(s) 950
EcoRII CCWGG 2 cut(s) 568, 1353
EcoRV GATATC 1 cut(s) 598
EcoT14I CCWWGG 1 cut(s) 1272
ErhI CCWWGG 1 cut(s) 1272
FaeI CATG 8 cut(s) 38, 268, 388, 466, 931, 1180, 1276, 1319
FatI CATG 8 cut(s) 34, 264, 384, 462, 927, 1176, 1272, 1315
FblI GTMKAC 1 cut(s) 991
Fnu4HI GCNGC 5 cut(s) 405, 919, 941, 969, 1361
FokI GGATG 2 cut(s) 32, 1017
Fsp4HI GCNGC 5 cut(s) 405, 919, 941, 969, 1361
FspBI CTAG 3 cut(s) 302, 416, 888
GluI GCNGC 5 cut(s) 405, 919, 941, 969, 1361
GsaI CCCAGC 1 cut(s) 59
GsuI CTGGAG 2 cut(s) 339, 849
HaeIII GGCC 5 cut(s) 66, 420, 963, 1117, 1301
HgaI GACGC 1 cut(s) 1063
Hin1II CATG 8 cut(s) 38, 268, 388, 466, 931, 1180, 1276, 1319
HincII GTYRAC 4 cut(s) 133, 825, 907, 1351
HindII GTYRAC 4 cut(s) 133, 825, 907, 1351
HinfI GANTC 5 cut(s) 207, 281, 565, 582, 875
HpaI GTTAAC 2 cut(s) 825, 1351
HphI GGTGA 2 cut(s) 333, 1202
Hpy166II GTNNAC 5 cut(s) 133, 825, 907, 992, 1351
Hpy188I TCNGA 2 cut(s) 314, 795
Hpy8I GTNNAC 5 cut(s) 133, 825, 907, 992, 1351
Hpy99I CGWCG 1 cut(s) 25
HpyCH4III ACNGT 6 cut(s) 524, 553, 860, 925, 1145, 1154
HpyCH4IV ACGT 3 cut(s) 20, 645, 701
HpyF10VI GCNNNNNNNGC 2 cut(s) 251, 1298
HpyF3I CTNAG 1 cut(s) 712
HpySE526I ACGT 3 cut(s) 20, 645, 701
Hsp92II CATG 8 cut(s) 38, 268, 388, 466, 931, 1180, 1276, 1319
KspAI GTTAAC 2 cut(s) 825, 1351
Kzo9I GATC 2 cut(s) 1107, 1319
LmnI GCTCC 1 cut(s) 830
Lsp1109I GCAGC 5 cut(s) 416, 930, 952, 980, 1347
LweI GCATC 4 cut(s) 54, 232, 391, 697
MabI ACCWGGT 1 cut(s) 1353
MaeI CTAG 3 cut(s) 302, 416, 888
MaeII ACGT 3 cut(s) 20, 645, 701
MaeIII GTNAC 1 cut(s) 358
MalI GATC 2 cut(s) 1109, 1321
MboI GATC 2 cut(s) 1107, 1319
MboII GAAGA 6 cut(s) 221, 330, 818, 860, 1276, 1294
MfeI CAATTG 1 cut(s) 587
MhlI GDGCHC 1 cut(s) 720
MluCI AATT 9 cut(s) 86, 178, 216, 334, 346, 587, 735, 945, 950
MlyI GAGTC 1 cut(s) 869
MmeI TCCRAC 1 cut(s) 260
MroXI GAANNNNTTC 1 cut(s) 669
MseI TTAA 7 cut(s) 17, 513, 789, 824, 1197, 1232, 1350
MslI CAYNNNNRTG 4 cut(s) 274, 926, 1175, 1181
MspA1I CMGCKG 1 cut(s) 803
MspR9I CCNGG 2 cut(s) 570, 1355
MunI CAATTG 1 cut(s) 587
MvaI CCWGG 2 cut(s) 570, 1355
MwoI GCNNNNNNNGC 2 cut(s) 251, 1298
NcoI CCATGG 1 cut(s) 1272
NdeII GATC 2 cut(s) 1107, 1319
NlaIII CATG 8 cut(s) 38, 268, 388, 466, 931, 1180, 1276, 1319
NlaIV GGNNCC 2 cut(s) 772, 962
NspI RCATGY 2 cut(s) 38, 268
PaeR7I CTCGAG 1 cut(s) 728
PagI TCATGA 2 cut(s) 384, 927
PceI AGGCCT 1 cut(s) 420
PcsI WCGNNNNNNNCGW 1 cut(s) 726
PdmI GAANNNNTTC 1 cut(s) 669
PfeI GAWTC 4 cut(s) 207, 281, 565, 582
PflMI CCANNNNNTGG 1 cut(s) 1278
PfoI TCCNGGA 1 cut(s) 568
PkrI GCNGC 5 cut(s) 406, 920, 942, 970, 1362
PleI GAGTC 1 cut(s) 869
PmaCI CACGTG 1 cut(s) 646
PmlI CACGTG 1 cut(s) 646
PpsI GAGTC 1 cut(s) 869
Ppu21I YACGTR 1 cut(s) 646
PpuMI RGGWCCY 1 cut(s) 1310
Psp5II RGGWCCY 1 cut(s) 1310
Psp6I CCWGG 2 cut(s) 568, 1353
PspCI CACGTG 1 cut(s) 646
PspFI CCCAGC 1 cut(s) 55
PspGI CCWGG 2 cut(s) 568, 1353
PspN4I GGNNCC 2 cut(s) 772, 962
PspPI GGNCC 5 cut(s) 173, 770, 961, 1116, 1310
PspPPI RGGWCCY 1 cut(s) 1310
PstNI CAGNNNCTG 1 cut(s) 1360
PvuII CAGCTG 1 cut(s) 803
RsaI GTAC 2 cut(s) 779, 1151
RsaNI GTAC 2 cut(s) 778, 1150
RseI CAYNNNNRTG 4 cut(s) 274, 926, 1175, 1181
SaqAI TTAA 7 cut(s) 17, 513, 789, 824, 1197, 1232, 1350
SatI GCNGC 5 cut(s) 405, 919, 941, 969, 1361
Sau3AI GATC 2 cut(s) 1107, 1319
Sau96I GGNCC 5 cut(s) 173, 770, 961, 1116, 1310
SchI GAGTC 1 cut(s) 869
ScrFI CCNGG 2 cut(s) 570, 1355
SduI GDGCHC 1 cut(s) 720
SexAI ACCWGGT 1 cut(s) 1353
SfaNI GCATC 4 cut(s) 54, 232, 391, 697
SfcI CTRYAG 2 cut(s) 1038, 1144
Sfr274I CTCGAG 1 cut(s) 728
SinI GGWCC 3 cut(s) 173, 770, 1310
SlaI CTCGAG 1 cut(s) 728
SmiMI CAYNNNNRTG 4 cut(s) 274, 926, 1175, 1181
SmlI CTYRAG 4 cut(s) 60, 168, 728, 1024
SmoI CTYRAG 4 cut(s) 60, 168, 728, 1024
Sse9I AATT 9 cut(s) 86, 178, 216, 334, 346, 587, 735, 945, 950
SseBI AGGCCT 1 cut(s) 420
SsiI CCGC 1 cut(s) 1092
SspMI CTAG 3 cut(s) 302, 416, 888
StuI AGGCCT 1 cut(s) 420
StyD4I CCNGG 2 cut(s) 568, 1353
StyI CCWWGG 1 cut(s) 1272
TaaI ACNGT 6 cut(s) 524, 553, 860, 925, 1145, 1154
TaiI ACGT 3 cut(s) 23, 648, 704
TaqI TCGA 2 cut(s) 210, 729
TasI AATT 9 cut(s) 86, 178, 216, 334, 346, 587, 735, 945, 950
TfiI GAWTC 4 cut(s) 207, 281, 565, 582
Tru1I TTAA 7 cut(s) 17, 513, 789, 824, 1197, 1232, 1350
Tru9I TTAA 7 cut(s) 17, 513, 789, 824, 1197, 1232, 1350
TscAI CASTG 1 cut(s) 625
TseI GCWGC 5 cut(s) 404, 918, 940, 968, 1360
TspDTI ATGAA 6 cut(s) 107, 133, 401, 451, 590, 598
TspRI CASTG 1 cut(s) 625
Van91I CCANNNNNTGG 1 cut(s) 1278
VpaK11BI GGWCC 3 cut(s) 173, 770, 1310
XapI RAATTY 3 cut(s) 178, 346, 950
XceI RCATGY 2 cut(s) 38, 268
XhoI CTCGAG 1 cut(s) 728
XmiI GTMKAC 1 cut(s) 991
XmnI GAANNNNTTC 1 cut(s) 669
XspI CTAG 3 cut(s) 302, 416, 888
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.