Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr7C

Orthogroup ID

OG0003418

Physical Location & Seq

Genomic Coordinates Forward (+)

66543930 .. 66549421

Gene Structure 5492 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh7CG495100.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2091 bp

ATGGCCAGGCCTATGCATCGAGGTTCATCCGGGGCACGGATCTCGGGTGGCAGCAATGATTTTTGGGACTCCCAAATGAAAGATAAAACGGATAAAGAAGATTTGGATAGAAGAGCTTCTTCTGATCAGAACAGTTTTGCATTTAGAATTCCGGTTAGACTACTTTTGGGGGAAAATTCTCCTTCCAAACAGGGAGTTGGTGAAAATGGCTTTGCATCAGAGCCCTTATTAGCCGTCACTCCTAGAAGTCGGCACAAGTTAACTCTGCTGTTGTTGAAGTTAAGTTTAGTATTGATTGTTATTTTTGCTCTTACTGGATCCTTTTGGTGGACAATCTCCATTTCCACCACTTCAAGAGGTCACATATACCATGGTTATCGGCGTCTCCAGCAAGAACTTGTTTCTGACCTGTGGCACATTGGAGAGCTTTCTCTTGGTTCTTCACGGTTGAAAGATTTAGATTTTTGTCCTCAAGAGTTTGAAAATCATGTTCCCTGTTTTAATGTTTCGGAGAATCTTGCCTTGGGTTTGTCTGATGGCAATGAGTATGACCGGAACTGTGGGCAAGCAATGAGGCAAAATTGTCTAGTTCTTCCACCTGTGAATTACAAGATTCCTCTTAGGTGGCCTACTGGTAAAGATGTCATTTGGTCTACAAATGTGAAATTAACAGCGCAGGAAGTACTTTCCTCTGGCAGCATGACAAAGAGGATGATGATGTTGGAAGAAGATCAAATTTCATTCCGTTCAGCCTCGTTGATGTTTGATGGTGTTGAAGATTACTCACATCAAATTGCAGAAATGATAGGGCTCAGGAATGAATCTAACTTCATACAAGCTGGGGTGAGAACCATCTTGGATATAGGATGTGGCTATGGGAGTTTTGGAGCGCATCTCTTTTCCAAACAACTCCTAACAATGTGCATTGCAAACTATGAGGCTTCAGGAAGCCAAGTCCAGCTAACTCTTGAAAGGGGTCTTCCTGCAATGATTGGTTCTTTCACTTCAAAACAGTTGCCATACCCATCTCTCTCTTTTGATATGTTGCATTGTGCAAGATGTGGCATTGATTGGGAACAACGAGATGGGATTTTCTTGATTGAAGTTGATAGACTTCTGAAGCCTGGTGGATACTTTGTATGGACATCACCAATTACGAATGCTCAGACATTTCTCCGCAACAAAGTGAATAAGAAAAGGTGGGACATCGTCCATGATTTTGCAGAAAATCTCTGCTGGGAAATGTTGTCGCAGCAGGATGAAACCGTGATATGGAAAAAGACAAGTAAAAGAAATTGTTACAGTTCACGGAAATCTGGTTCAGGGCCCTCTCTATGCAGTAAAGGCCATGATATTGAATCACCATATTACCGACCACTCCAAGCCTGCATTGGGGGAACACAGAGCCGTCGATGGATTCCTATTGAACAGAGGACAACCTGGCCTTCTAGGGCTAACCTGAACAAGAGTGAACTTGCTATATATGGATTGCACCAACAAGAACTTGCTGAGGATGCTGAAACTTGGAAAATGGCAGTCCGTAATTATTGGTCTCTTCTGTCACCATTAATTTTCTCAGATCATCCAAAGAGGCCTGGTGATGAAGATCCTTCACCTCCATATAACATGCTTAGAAATGTACTAGACATGAATGCACGATTTGGTGGTTTAAATTCTGCATTATTGGAAGCTGGAAAGTCCGTGTGGGTAATGAATGTTGTCCCAACAAATGGTCCCAATTATCTGCCTTTGATCCTTGACAGGGGCTTTGTTGGAGTTTTGCACGATTGGTGTGAGCCCTTTCCAATATATCCAAGAACTTATGATATGGTGCATGCACAAGGACTTCTTTCTGTTGAAACTGATCAACAGCGCAGGTGTACCATTCTTGATTTATTCACTGAGATTGATCGATTGCTTCGTCCAGAGGGCTGGGTGATCATCCATGACAAAGCTTCTCTCATTGAATCAGCAAGAGCTTTGACAACAGGGTTGAAGTGGGATGCACGGGTGGTAGAGATTGAAAGTAACAGTGATGAGAAACTACTGATATGCCAAAAGCCCTTCTTTAAGAAACAAGCAAACAAATAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000271 GO:0003674 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005768 GO:0005794 GO:0005802 GO:0005975 GO:0005976 GO:0007275 GO:0008150 GO:0008152 GO:0008168 GO:0008757 GO:0009058 GO:0009059 GO:0009664 GO:0009719 GO:0009725 GO:0009735 GO:0009832 GO:0009987 GO:0010033 GO:0010289 GO:0010383 GO:0010393 GO:0010394 GO:0012505 GO:0016043 GO:0016051 GO:0016740 GO:0016741 GO:0017144 GO:0022622 GO:0031410 GO:0031982 GO:0031984 GO:0032259 GO:0032501 GO:0032502 GO:0033692 GO:0034637 GO:0034645 GO:0042221 GO:0042546 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044036 GO:0044038 GO:0044085 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044262 GO:0044264 GO:0044422 GO:0044424 GO:0044431 GO:0044444 GO:0044446 GO:0044464 GO:0045229 GO:0045488 GO:0045489 GO:0048364 GO:0048367 GO:0048731 GO:0048856 GO:0050896 GO:0052325 GO:0052546 GO:0070589 GO:0070592 GO:0071554 GO:0071555 GO:0071669 GO:0071704 GO:0071840 GO:0097708 GO:0098791 GO:0099402 GO:1901576

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Methyltransf_29

Protein Analysis

696

Amino Acids

78.92

Weight (kDa)

7.22

Isoelectric Point (pI)

50.14

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Methyltransf_29	PF03141	162 - 687	1.5e-141	Putative S-adenosyl-L-methionine-dependent methyltransferase
Methyltransf_11	PF08241	286 - 380	2.9e-06	Methyltransferase domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

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Publication-ready

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Orthologous Genes (Group: OG0003418)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G78240 AT1G78240
fragaria_vesca	FvH4_5g37070 FvH4_5g37070 FvH4_5g37070 FvH4_5g37070 FvH4_5g37070 FvH4_5g37070 FvH4_5g37070 FvH4_5g37070 FvH4_5g37070 FvH4_5g37070 FvH4_5g37070 FvH4_5g37070 FvH4_5g37070 FvH4_5g37070 FvH4_5g37070
malus_domestica	MD00G1010000.v1.1 MD08G1184700.v1.1
prunus_persica	Prupe.1G518800_v2.0.a1
pyrus_communis	pycom08g15840 pycom15g33280
rosa_chinensis	RchiOBHm_Chr7g0243891
rosa_laevigata	RLG00000000826
rosa_multiflora	Rmu_ssc0000352.1_g000007
rosa_roxburghii	Rroxscaffold_3G00221690
rosa_rugosa	Rorug07G0321800 Rorug07G0321900 Rorug07G0322000 Rorug07G0322100 Rorug07G0322200 Rorug07G0322300
rosa_samantha	Rh7AG476700 Rh7BG448000 Rh7CG495100
rosa_wichuraiana	Rw7G039780

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	1866
Acc36I	ACCTGC	1 cut(s)	1866
AccB7I	CCANNNNNTGG	1 cut(s)	1730
AccI	GTMKAC	1 cut(s)	653
AciI	CCGC	1 cut(s)	1177
AclWI	GGATC	5 cut(s)	47, 312, 325, 1601, 1747
AcoI	YGGCCR	1 cut(s)	3
AcsI	RAATTY	4 cut(s)	147, 175, 735, 1672
AcuI	CTGAAG	2 cut(s)	927, 1139
AcyI	GRCGYC	1 cut(s)	382
AfaI	GTAC	3 cut(s)	684, 1641, 1882
AfiI	CCNNNNNNNGG	6 cut(s)	36, 327, 1272, 1392, 1730, 1762
AjnI	CCWGG	4 cut(s)	5, 1123, 1439, 1594
AjuI	GAANNNNNNNTTGG	2 cut(s)	506, 538
AloI	GAACNNNNNNTCC	2 cut(s)	1303, 1335
AluBI	AGCT	7 cut(s)	116, 427, 839, 961, 1691, 1955, 1979
AluI	AGCT	7 cut(s)	116, 427, 839, 961, 1691, 1955, 1979
Alw26I	GTCTC	2 cut(s)	389, 1557
AlwI	GGATC	5 cut(s)	47, 312, 325, 1601, 1747
Ama87I	CYCGRG	1 cut(s)	43
AoxI	GGCC	7 cut(s)	3, 8, 626, 1325, 1345, 1442, 1592
ApaI	GGGCCC	1 cut(s)	1329
ApeKI	GCWGC	3 cut(s)	51, 696, 1252
ApoI	RAATTY	4 cut(s)	147, 175, 735, 1672
ArsI	GACNNNNNNTTYG	2 cut(s)	1751, 1783
AseI	ATTAAT	1 cut(s)	1568
Asp700I	GAANNNNTTC	1 cut(s)	115
AspLEI	GCGC	3 cut(s)	676, 892, 1875
AspS9I	GGNCC	3 cut(s)	1325, 1326, 1733
AsuC2I	CCSGG	1 cut(s)	31
AsuHPI	GGTGA	8 cut(s)	212, 856, 1140, 1353, 1554, 1605, 1610, 1948
AvaI	CYCGRG	1 cut(s)	43
AvaII	GGWCC	1 cut(s)	1733
BaeGI	GKGCMC	2 cut(s)	37, 1329
BalI	TGGCCA	1 cut(s)	5
BamHI	GGATCC	1 cut(s)	317
BanII	GRGCYC	4 cut(s)	225, 813, 1329, 1800
BbsI	GAAGAC	1 cut(s)	971
BbvCI	CCTCAGC	1 cut(s)	1509
BbvI	GCAGC	3 cut(s)	63, 708, 1264
BccI	CCATC	6 cut(s)	530, 761, 860, 1033, 1079, 1407
BceAI	ACGGC	2 cut(s)	218, 1392
BcgI	CGANNNNNNTGC	2 cut(s)	24, 58
BciT130I	CCWGG	4 cut(s)	7, 1125, 1441, 1596
BciVI	GTATCC	1 cut(s)	1124
BclI	TGATCA	3 cut(s)	124, 1864, 1938
BcnI	CCSGG	1 cut(s)	31
BcoDI	GTCTC	2 cut(s)	389, 1557
BfaI	CTAG	4 cut(s)	243, 587, 1449, 1643
BfuAI	ACCTGC	1 cut(s)	1866
BfuI	GTATCC	1 cut(s)	1124
BisI	GCNGC	3 cut(s)	52, 697, 1253
BlsI	GCNGC	3 cut(s)	53, 698, 1254
BmcAI	AGTACT	1 cut(s)	684
Bme1390I	CCNGG	5 cut(s)	7, 31, 1125, 1441, 1596
Bme18I	GGWCC	1 cut(s)	1733
BmeT110I	CYCGRG	1 cut(s)	43
BmgT120I	GGNCC	3 cut(s)	1325, 1326, 1733
BmiI	GGNNCC	3 cut(s)	319, 1327, 1735
BmrFI	CCNGG	5 cut(s)	7, 31, 1125, 1441, 1596
BmsI	GCATC	5 cut(s)	25, 224, 901, 1504, 1993
BpiI	GAAGAC	1 cut(s)	971
BplI	GAGNNNNNCTC	2 cut(s)	879, 911
BpmI	CTGGAG	1 cut(s)	371
Bpu10I	CCTNAGC	2 cut(s)	812, 1509
BpuEI	CTTGAG	1 cut(s)	456
BpuMI	CCSGG	1 cut(s)	31
Bsa29I	ATCGAT	1 cut(s)	1912
BsaBI	GATNNNNATC	1 cut(s)	1605
BsaHI	GRCGYC	1 cut(s)	382
BsaI	GGTCTC	1 cut(s)	1557
BsaJI	CCNNGG	3 cut(s)	30, 370, 522
BsaWI	WCCGGW	2 cut(s)	151, 552
Bsc4I	CCNNNNNNNGG	6 cut(s)	36, 327, 1272, 1392, 1730, 1762
Bse1I	ACTGG	2 cut(s)	319, 637
Bse3DI	GCAATG	5 cut(s)	61, 547, 576, 924, 993
Bse8I	GATNNNNATC	1 cut(s)	1605
BseBI	CCWGG	4 cut(s)	7, 1125, 1441, 1596
BseCI	ATCGAT	1 cut(s)	1912
BseDI	CCNNGG	3 cut(s)	30, 370, 522
BseGI	GGATG	8 cut(s)	26, 717, 872, 1264, 1519, 1582, 1941, 2008
BseJI	GATNNNNATC	1 cut(s)	1605
BseLI	CCNNNNNNNGG	6 cut(s)	36, 327, 1272, 1392, 1730, 1762
BseMI	GCAATG	5 cut(s)	61, 547, 576, 924, 993
BseMII	CTCAG	5 cut(s)	826, 1178, 1500, 1590, 1893
BseNI	ACTGG	2 cut(s)	319, 637
BseSI	GKGCMC	2 cut(s)	37, 1329
BseXI	GCAGC	3 cut(s)	63, 708, 1264
BseYI	CCCAGC	3 cut(s)	839, 1236, 1932
BshFI	GGCC	7 cut(s)	5, 10, 628, 1327, 1347, 1444, 1594
BshVI	ATCGAT	1 cut(s)	1912
BsiHKCI	CYCGRG	1 cut(s)	43
BsiSI	CCGG	3 cut(s)	30, 152, 553
BslFI	GGGAC	4 cut(s)	80, 1217, 1706, 1719
BslI	CCNNNNNNNGG	6 cut(s)	36, 327, 1272, 1392, 1730, 1762
BsmAI	GTCTC	2 cut(s)	389, 1557
BsmBI	CGTCTC	1 cut(s)	389
BsmFI	GGGAC	4 cut(s)	80, 1217, 1706, 1719
BsmI	GAATGC	2 cut(s)	1165, 1657
BsnI	GGCC	7 cut(s)	5, 10, 628, 1327, 1347, 1444, 1594
Bso31I	GGTCTC	1 cut(s)	1557
BsoBI	CYCGRG	1 cut(s)	43
Bsp120I	GGGCCC	1 cut(s)	1325
Bsp1286I	GDGCHC	5 cut(s)	37, 225, 813, 1329, 1800
Bsp19I	CCATGG	1 cut(s)	370
BspACI	CCGC	1 cut(s)	1177
BspANI	GGCC	7 cut(s)	5, 10, 628, 1327, 1347, 1444, 1594
BspCNI	CTCAG	5 cut(s)	825, 1177, 1501, 1589, 1894
BspDI	ATCGAT	1 cut(s)	1912
BspLI	GGNNCC	3 cut(s)	319, 1327, 1735
BspMI	ACCTGC	1 cut(s)	1866
BspPI	GGATC	5 cut(s)	47, 312, 325, 1601, 1747
BspQI	GCTCTTC	1 cut(s)	106
BspTNI	GGTCTC	1 cut(s)	1557
BsrDI	GCAATG	5 cut(s)	61, 547, 576, 924, 993
BsrI	ACTGG	2 cut(s)	319, 637
BssECI	CCNNGG	3 cut(s)	30, 370, 522
BssNI	GRCGYC	1 cut(s)	382
BssT1I	CCWWGG	2 cut(s)	370, 522
Bst2UI	CCWGG	4 cut(s)	7, 1125, 1441, 1596
Bst4CI	ACNGT	7 cut(s)	134, 447, 560, 1014, 1267, 1304, 2033
Bst6I	CTCTTC	2 cut(s)	106, 1560
BstACI	GRCGYC	1 cut(s)	382
BstC8I	GCNNGC	3 cut(s)	567, 1387, 1836
BstDEI	CTNAG	7 cut(s)	620, 812, 1164, 1509, 1576, 1631, 1902
BstDSI	CCRYGG	1 cut(s)	370
BstF5I	GGATG	8 cut(s)	26, 717, 872, 1264, 1519, 1582, 1941, 2008
BstHHI	GCGC	3 cut(s)	676, 892, 1875
BstMAI	GTCTC	2 cut(s)	389, 1557
BstMWI	GCNNNNNNNGC	3 cut(s)	388, 1344, 1514
BstNI	CCWGG	4 cut(s)	7, 1125, 1441, 1596
BstNSI	RCATGY	2 cut(s)	1630, 1838
BstSCI	CCNGG	5 cut(s)	5, 29, 1123, 1439, 1594
BstSLI	GKGCMC	2 cut(s)	37, 1329
BstV1I	GCAGC	3 cut(s)	63, 708, 1264
BstV2I	GAAGAC	1 cut(s)	971
BstX2I	RGATCY	3 cut(s)	39, 317, 1606
BstXI	CCANNNNNNTGG	1 cut(s)	1932
BstYI	RGATCY	3 cut(s)	39, 317, 1606
Bsu15I	ATCGAT	1 cut(s)	1912
BsuI	GTATCC	1 cut(s)	1124
BsuRI	GGCC	7 cut(s)	5, 10, 628, 1327, 1347, 1444, 1594
BsuTUI	ATCGAT	1 cut(s)	1912
BtgI	CCRYGG	1 cut(s)	370
BtsCI	GGATG	8 cut(s)	26, 717, 872, 1264, 1519, 1582, 1941, 2008
BtsIMutI	CAGTG	2 cut(s)	1899, 2038
BveI	ACCTGC	1 cut(s)	1866
Cac8I	GCNNGC	3 cut(s)	567, 1387, 1836
CfoI	GCGC	3 cut(s)	676, 892, 1875
Cfr13I	GGNCC	3 cut(s)	1325, 1326, 1733
ClaI	ATCGAT	1 cut(s)	1912
CseI	GACGC	1 cut(s)	371
Csp6I	GTAC	3 cut(s)	683, 1640, 1881
CviAII	CATG	9 cut(s)	371, 488, 700, 1214, 1349, 1627, 1648, 1835, 1946
CviQI	GTAC	3 cut(s)	683, 1640, 1881
DdeI	CTNAG	7 cut(s)	620, 812, 1164, 1509, 1576, 1631, 1902
DraI	TTTAAA	1 cut(s)	1671
EaeI	YGGCCR	1 cut(s)	3
Eam1104I	CTCTTC	2 cut(s)	106, 1560
EarI	CTCTTC	2 cut(s)	106, 1560
Eco130I	CCWWGG	2 cut(s)	370, 522
Eco147I	AGGCCT	2 cut(s)	10, 1594
Eco24I	GRGCYC	4 cut(s)	225, 813, 1329, 1800
Eco31I	GGTCTC	1 cut(s)	1557
Eco47I	GGWCC	1 cut(s)	1733
Eco57I	CTGAAG	2 cut(s)	927, 1139
Eco88I	CYCGRG	1 cut(s)	43
EcoO109I	RGGNCCY	2 cut(s)	1325, 1326
EcoRI	GAATTC	1 cut(s)	147
EcoRII	CCWGG	4 cut(s)	5, 1123, 1439, 1594
EcoT14I	CCWWGG	2 cut(s)	370, 522
EcoT22I	ATGCAT	1 cut(s)	18
EcoT38I	GRGCYC	4 cut(s)	225, 813, 1329, 1800
ErhI	CCWWGG	2 cut(s)	370, 522
Esp3I	CGTCTC	1 cut(s)	389
FaeI	CATG	9 cut(s)	374, 491, 703, 1217, 1352, 1630, 1651, 1838, 1949
FalI	AAGNNNNNCTT	6 cut(s)	103, 135, 1833, 1865, 2051, 2083
FaqI	GGGAC	4 cut(s)	80, 1217, 1706, 1719
FatI	CATG	9 cut(s)	370, 487, 699, 1213, 1348, 1626, 1647, 1834, 1945
FbaI	TGATCA	3 cut(s)	124, 1864, 1938
FblI	GTMKAC	1 cut(s)	653
Fnu4HI	GCNGC	3 cut(s)	52, 697, 1253
FokI	GGATG	8 cut(s)	13, 724, 879, 1271, 1526, 1569, 1928, 2015
FriOI	GRGCYC	4 cut(s)	225, 813, 1329, 1800
Fsp4HI	GCNGC	3 cut(s)	52, 697, 1253
FspBI	CTAG	4 cut(s)	243, 587, 1449, 1643
GlaI	GCGC	3 cut(s)	675, 891, 1874
GluI	GCNGC	3 cut(s)	52, 697, 1253
GsaI	CCCAGC	3 cut(s)	843, 1240, 1936
GsuI	CTGGAG	1 cut(s)	371
HaeIII	GGCC	7 cut(s)	5, 10, 628, 1327, 1347, 1444, 1594
HapII	CCGG	3 cut(s)	30, 152, 553
HgaI	GACGC	1 cut(s)	371
HhaI	GCGC	3 cut(s)	676, 892, 1875
Hin1I	GRCGYC	1 cut(s)	382
Hin1II	CATG	9 cut(s)	374, 491, 703, 1217, 1352, 1630, 1651, 1838, 1949
Hin6I	GCGC	3 cut(s)	674, 890, 1873
HinP1I	GCGC	3 cut(s)	674, 890, 1873
HincII	GTYRAC	1 cut(s)	261
HindII	GTYRAC	1 cut(s)	261
HindIII	AAGCTT	1 cut(s)	1953
HinfI	GANTC	7 cut(s)	68, 514, 613, 821, 1358, 1417, 1967
HpaI	GTTAAC	1 cut(s)	261
HpaII	CCGG	3 cut(s)	30, 152, 553
HphI	GGTGA	8 cut(s)	212, 856, 1140, 1353, 1554, 1605, 1610, 1948
Hpy166II	GTNNAC	6 cut(s)	261, 330, 654, 1307, 1472, 1881
Hpy188I	TCNGA	9 cut(s)	124, 129, 220, 406, 511, 535, 1119, 1167, 1579
Hpy188III	TCNNGA	8 cut(s)	354, 473, 814, 945, 968, 1096, 1889, 1925
Hpy8I	GTNNAC	6 cut(s)	261, 330, 654, 1307, 1472, 1881
Hpy99I	CGWCG	1 cut(s)	1413
HpyAV	CCTTC	4 cut(s)	192, 1455, 1620, 2074
HpyCH4III	ACNGT	7 cut(s)	134, 447, 560, 1014, 1267, 1304, 2033
HpyF10VI	GCNNNNNNNGC	3 cut(s)	388, 1344, 1514
HpyF3I	CTNAG	7 cut(s)	620, 812, 1164, 1509, 1576, 1631, 1902
Hsp92I	GRCGYC	1 cut(s)	382
Hsp92II	CATG	9 cut(s)	374, 491, 703, 1217, 1352, 1630, 1651, 1838, 1949
HspAI	GCGC	3 cut(s)	674, 890, 1873
Ksp22I	TGATCA	3 cut(s)	124, 1864, 1938
KspAI	GTTAAC	1 cut(s)	261
LguI	GCTCTTC	1 cut(s)	106
LmnI	GCTCC	1 cut(s)	887
Lsp1109I	GCAGC	3 cut(s)	63, 708, 1264
LweI	GCATC	5 cut(s)	25, 224, 901, 1504, 1993
MaeI	CTAG	4 cut(s)	243, 587, 1449, 1643
MaeIII	GTNAC	5 cut(s)	235, 359, 1298, 1560, 2027
MflI	RGATCY	3 cut(s)	39, 317, 1606
MhlI	GDGCHC	5 cut(s)	37, 225, 813, 1329, 1800
MlsI	TGGCCA	1 cut(s)	5
MluNI	TGGCCA	1 cut(s)	5
MlyI	GAGTC	1 cut(s)	62
MmeI	TCCRAC	2 cut(s)	702, 1753
Mox20I	TGGCCA	1 cut(s)	5
Mph1103I	ATGCAT	1 cut(s)	18
MroXI	GAANNNNTTC	1 cut(s)	115
MscI	TGGCCA	1 cut(s)	5
MseI	TTAA	7 cut(s)	260, 281, 501, 668, 1568, 1670, 2070
Msp20I	TGGCCA	1 cut(s)	5
MspI	CCGG	3 cut(s)	30, 152, 553
MspR9I	CCNGG	5 cut(s)	7, 31, 1125, 1441, 1596
Mva1269I	GAATGC	2 cut(s)	1165, 1657
MvaI	CCWGG	4 cut(s)	7, 1125, 1441, 1596
MwoI	GCNNNNNNNGC	3 cut(s)	388, 1344, 1514
NciI	CCSGG	1 cut(s)	31
NcoI	CCATGG	1 cut(s)	370
NlaIII	CATG	9 cut(s)	374, 491, 703, 1217, 1352, 1630, 1651, 1838, 1949
NlaIV	GGNNCC	3 cut(s)	319, 1327, 1735
NmuCI	GTSAC	3 cut(s)	235, 359, 1560
NsiI	ATGCAT	1 cut(s)	18
NspI	RCATGY	2 cut(s)	1630, 1838
PaeI	GCATGC	1 cut(s)	1838
PaqCI	CACCTGC	1 cut(s)	1866
PceI	AGGCCT	2 cut(s)	10, 1594
PciSI	GCTCTTC	1 cut(s)	106
PcsI	WCGNNNNNNNCGW	1 cut(s)	1918
PctI	GAATGC	2 cut(s)	1165, 1657
PdmI	GAANNNNTTC	1 cut(s)	115
PfeI	GAWTC	6 cut(s)	514, 613, 821, 1358, 1417, 1967
PflFI	GACNNNGTC	1 cut(s)	1208
PflMI	CCANNNNNTGG	1 cut(s)	1730
PkrI	GCNGC	3 cut(s)	53, 698, 1254
PleI	GAGTC	1 cut(s)	62
PpsI	GAGTC	1 cut(s)	62
PshBI	ATTAAT	1 cut(s)	1568
Psp6I	CCWGG	4 cut(s)	5, 1123, 1439, 1594
PspFI	CCCAGC	3 cut(s)	839, 1236, 1932
PspGI	CCWGG	4 cut(s)	5, 1123, 1439, 1594
PspN4I	GGNNCC	3 cut(s)	319, 1327, 1735
PspOMI	GGGCCC	1 cut(s)	1325
PspPI	GGNCC	3 cut(s)	1325, 1326, 1733
PsuI	RGATCY	3 cut(s)	39, 317, 1606
PsyI	GACNNNGTC	1 cut(s)	1208
RsaI	GTAC	3 cut(s)	684, 1641, 1882
RsaNI	GTAC	3 cut(s)	683, 1640, 1881
SapI	GCTCTTC	1 cut(s)	106
SaqAI	TTAA	7 cut(s)	260, 281, 501, 668, 1568, 1670, 2070
SatI	GCNGC	3 cut(s)	52, 697, 1253
Sau96I	GGNCC	3 cut(s)	1325, 1326, 1733
ScaI	AGTACT	1 cut(s)	684
SchI	GAGTC	1 cut(s)	62
ScrFI	CCNGG	5 cut(s)	7, 31, 1125, 1441, 1596
SduI	GDGCHC	5 cut(s)	37, 225, 813, 1329, 1800
SfaNI	GCATC	5 cut(s)	25, 224, 901, 1504, 1993
SinI	GGWCC	1 cut(s)	1733
SmlI	CTYRAG	1 cut(s)	471
SmoI	CTYRAG	1 cut(s)	471
SphI	GCATGC	1 cut(s)	1838
SseBI	AGGCCT	2 cut(s)	10, 1594
SsiI	CCGC	1 cut(s)	1177
SspMI	CTAG	4 cut(s)	243, 587, 1449, 1643
StuI	AGGCCT	2 cut(s)	10, 1594
StyD4I	CCNGG	5 cut(s)	5, 29, 1123, 1439, 1594
StyI	CCWWGG	2 cut(s)	370, 522
TaaI	ACNGT	7 cut(s)	134, 447, 560, 1014, 1267, 1304, 2033
TaqI	TCGA	3 cut(s)	19, 1411, 1912
TatI	WGTACW	2 cut(s)	682, 1639
TfiI	GAWTC	6 cut(s)	514, 613, 821, 1358, 1417, 1967
Tru1I	TTAA	7 cut(s)	260, 281, 501, 668, 1568, 1670, 2070
Tru9I	TTAA	7 cut(s)	260, 281, 501, 668, 1568, 1670, 2070
TscAI	CASTG	2 cut(s)	1906, 2038
TseFI	GTSAC	3 cut(s)	235, 359, 1560
TseI	GCWGC	3 cut(s)	51, 696, 1252
Tsp45I	GTSAC	3 cut(s)	235, 359, 1560
TspDTI	ATGAA	9 cut(s)	15, 92, 729, 820, 834, 1275, 1617, 1664, 1727
TspGWI	ACGGA	6 cut(s)	52, 104, 734, 1324, 1529, 1690
TspRI	CASTG	2 cut(s)	1906, 2038
Tth111I	GACNNNGTC	1 cut(s)	1208
Van91I	CCANNNNNTGG	1 cut(s)	1730
VpaK11BI	GGWCC	1 cut(s)	1733
VspI	ATTAAT	1 cut(s)	1568
XapI	RAATTY	4 cut(s)	147, 175, 735, 1672
XceI	RCATGY	2 cut(s)	1630, 1838
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1388
XmiI	GTMKAC	1 cut(s)	653
XmnI	GAANNNNTTC	1 cut(s)	115
XspI	CTAG	4 cut(s)	243, 587, 1449, 1643
ZrmI	AGTACT	1 cut(s)	684
Zsp2I	ATGCAT	1 cut(s)	18

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.