MD08G1228000.v1.1

Protein RETICULATA-related

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr08
OG0014588
Physical Location & Seq
Reverse (-)
29431465 .. 29437989
6525 bp
Loading structure...
UTR
Exon/CDS
Intron
MD08G1228000.v1.1.491

Sequence Viewer

Length: 1554 bp
ATGTCGCACGCTGTGTTCCAGACGGCTCAAATTATGCCGATAAACACGCAGCTCCCGACGAAGCCGATGCTGGCGGTTCCGGCCCAGCTTCGGATGGTGGAGCGGAGGGGCCTGGTGCTGAAGGCGAATTGCGCGCCGCCTCCGTCTACTTCCGATGCTGTTGACGGAGACTCCATGGCTATGCTGGAGCGCTGCTTCGTGGGGCCGTCGGTCCCCGGCGGGTTTGGTCCGGTTATGAAGGGACAGTACGGTGCGTTCGGTGCGGTTACTCTTGAGAAGGGCAAGCTCGACATGTCTCAGAAGCAATCCAAGTCTAGCCCCGAGACTGCAGTTGGGGGAGGTGGTGGAGATATTGGAAAGAGAATAAATAATGGTGGTGGTGATGGAGGTGATGATGATGGCGATGATGATGATTATTTTGATGACTTTGATGATGGCGACGAGGGAGATGAAGGTGGTCTGTTTAGAAGGAGGATGTTTCTTGAAGAGCTCTTTGATAGAAAATTTGTAGATGCGGTATTGAATGAGTGGCAAAGGACAATGATGGATTTACCTGCTGGGTTCCGGCAAGCTTATGAAATGGGATTGATCAGCTCTGCTCAAATGGTTAGATTTTTAGCGACCAATGCAAGGCCAACCAGTACTAGGTTTATTTCTCGTGCGCTTCCTGATGGAATATCAAGAGCATTCATTGGCAGAATGCTGGCAGATCCTGCTTTCTTATATAGGTTTCTTTTAGAGCAGGCTGCAACAATTGGTTCTTCAGTTTGGTGGGAGTTCAAGAATCGCAAGGGCAGGATAAAGAAAGAATGGGATTTGGCGCTTATAAACGTACTCACAGTAACAGCATGCAATGCTATTGTTGTTTGGTCACTTGCTCCTTGTCGTTCATACGGGAACACATTCAAGTTTGATTTGCAAAATACGTTACAGAAGCTCCCCAACAATATATTTGAGAAGAGCTACCCACTAAGGGAATTTGACCTGCAAAAGAGAGTTCACTCTTTCTTCTACAAGGCTGCTGAGTTGTGTATGGTTGGACTAACTGCTGGAGCTGTGCAAGGTTCTTTAGCAAATTTTTTGGCCCATAAAAAAGAAGGAAGGTTATCTGTGACGATCCCATCTGTCAAAGCAAATGCACTTGGTTATGGTGCCTTCCTTGGACTATATGCGAACCTGAGATATCAGCTATTATGTGGATTTGACAGAGCAATGATGAATCATTTTGATGTTATTGGAGTGGCACTATTTTTTAGCACGACACTGAGGATTTTGAATGTGCAATTAGGAGAGCGGTCGAGGTTGGCTTGGCTTGGGGTGGAGGCTGATCCACTGGTTCACTCTGATGATCTTTTGAAGGTTTACAGTAGGCCTTCTGAAAATCTTGATAAGCCCTCGTCAAAATGGTTTATATCAAAGAACGCCATTGTTTCTGGCCTTGGACTCCTCGGCATCAAACAGGGGACTGTGGACTCTGCTGACGGGGAAACATCAACCCCTAAGACACGCAGAAAGAGGATTGTCCGGAAGAAGGTGACTGCAAGTTCAGCGTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
RETICULATA-like

Protein Analysis

518

Amino Acids

56.87

Weight (kDa)

9.02

Isoelectric Point (pI)

36.82

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
RETICULATA-like PF11891 232 - 401 2.6e-59 Protein RETICULATA-related
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0014588)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G24690
fragaria_vesca FvH4_5g29610
malus_domestica MD08G1228000.v1.1 MD15G1422000.v1.1
prunus_persica Prupe.1G567400_v2.0.a1
pyrus_communis pycom08g19880 pycom15g37400
rosa_chinensis RchiOBHm_Chr7g0222671
rosa_laevigata RLG00000002033 RLG00000002034 RLG00000002035
rosa_multiflora Rmu_sc0008131.1_g000006
rosa_roxburghii Rroxscaffold_3G00236560
rosa_rugosa Rorug07G0211900
rosa_samantha Rh7AG355800 Rh7BG344300
rosa_wichuraiana Rw7G030190

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 827
Acc36I ACCTGC 2 cut(s) 562, 993
AccB1I GGYRCC 1 cut(s) 1151
AccBSI CCGCTC 2 cut(s) 103, 1294
AccI GTMKAC 1 cut(s) 146
AccII CGCG 1 cut(s) 134
AccIII TCCGGA 1 cut(s) 1524
AciI CCGC 7 cut(s) 74, 103, 137, 219, 263, 515, 1294
AclWI GGATC 3 cut(s) 704, 1111, 1322
AcsI RAATTY 3 cut(s) 503, 977, 1075
AcuI CTGAAG 2 cut(s) 140, 747
AdeI CACNNNGTG 1 cut(s) 13
AfaI GTAC 3 cut(s) 248, 643, 834
AfeI AGCGCT 1 cut(s) 191
AfiI CCNNNNNNNGG 5 cut(s) 90, 630, 645, 973, 1531
AflIII ACRYGT 1 cut(s) 291
AgsI TTSAA 6 cut(s) 485, 523, 781, 907, 1276, 1357
AjnI CCWGG 1 cut(s) 111
Alw21I GWGCWC 1 cut(s) 492
Alw26I GTCTC 3 cut(s) 162, 300, 317
AlwI GGATC 3 cut(s) 704, 1111, 1322
AlwNI CAGNNNCTG 1 cut(s) 713
Ama87I CYCGRG 1 cut(s) 320
Aor13HI TCCGGA 1 cut(s) 1524
Aor51HI AGCGCT 1 cut(s) 191
AoxI GGCC 7 cut(s) 81, 109, 203, 632, 1083, 1370, 1435
ApeKI GCWGC 4 cut(s) 49, 192, 746, 1019
ApoI RAATTY 3 cut(s) 503, 977, 1075
Asp700I GAANNNNTTC 1 cut(s) 902
AspLEI GCGC 5 cut(s) 134, 136, 192, 664, 823
AspS9I GGNCC 6 cut(s) 82, 109, 203, 211, 227, 1084
AsuC2I CCSGG 1 cut(s) 216
AsuHPI GGTGA 3 cut(s) 392, 401, 1546
AvaI CYCGRG 1 cut(s) 320
AvaII GGWCC 2 cut(s) 211, 227
BanI GGYRCC 1 cut(s) 1151
BanII GRGCYC 1 cut(s) 492
BarI GAAGNNNNNNTAC 2 cut(s) 230, 262
BauI CACGAG 1 cut(s) 657
Bbv12I GWGCWC 1 cut(s) 492
BbvI GCAGC 4 cut(s) 61, 179, 733, 1006
BccI CCATC 7 cut(s) 88, 377, 392, 428, 538, 665, 1129
BceAI ACGGC 2 cut(s) 39, 190
BcgI CGANNNNNNTGC 2 cut(s) 49, 83
BciT130I CCWGG 1 cut(s) 113
BclI TGATCA 1 cut(s) 588
BcnI CCSGG 1 cut(s) 216
BcoDI GTCTC 3 cut(s) 162, 300, 317
BfaI CTAG 2 cut(s) 315, 645
BfmI CTRYAG 1 cut(s) 327
BfoI RGCGCY 2 cut(s) 193, 824
BfuAI ACCTGC 2 cut(s) 562, 993
BisI GCNGC 5 cut(s) 50, 137, 193, 747, 1020
BlsI GCNGC 5 cut(s) 51, 138, 194, 748, 1021
BmcAI AGTACT 1 cut(s) 643
Bme1390I CCNGG 2 cut(s) 113, 216
Bme18I GGWCC 2 cut(s) 211, 227
BmeT110I CYCGRG 1 cut(s) 320
BmgT120I GGNCC 6 cut(s) 82, 109, 203, 211, 227, 1084
BmiI GGNNCC 6 cut(s) 78, 110, 204, 213, 563, 1153
BmrFI CCNGG 2 cut(s) 113, 216
BmsI GCATC 4 cut(s) 57, 145, 502, 1461
BpmI CTGGAG 2 cut(s) 206, 1071
BpuEI CTTGAG 1 cut(s) 293
BpuMI CCSGG 1 cut(s) 216
BsaJI CCNNGG 5 cut(s) 174, 214, 1159, 1438, 1447
BsaWI WCCGGW 2 cut(s) 229, 1524
BsaXI ACNNNNNCTCC 4 cut(s) 155, 185, 921, 951
Bsc4I CCNNNNNNNGG 5 cut(s) 90, 630, 645, 973, 1531
Bse1I ACTGG 2 cut(s) 639, 1338
Bse3DI GCAATG 2 cut(s) 859, 1218
BseAI TCCGGA 1 cut(s) 1524
BseBI CCWGG 1 cut(s) 113
BseDI CCNNGG 5 cut(s) 174, 214, 1159, 1438, 1447
BseGI GGATG 2 cut(s) 99, 480
BseLI CCNNNNNNNGG 5 cut(s) 90, 630, 645, 973, 1531
BseMI GCAATG 2 cut(s) 859, 1218
BseMII CTCAG 4 cut(s) 311, 1014, 1169, 1256
BseNI ACTGG 2 cut(s) 639, 1338
BsePI GCGCGC 1 cut(s) 132
BseRI GAGGAG 1 cut(s) 1436
BseXI GCAGC 4 cut(s) 61, 179, 733, 1006
BseYI CCCAGC 2 cut(s) 84, 557
Bsh1236I CGCG 1 cut(s) 134
Bsh1285I CGRYCG 1 cut(s) 1298
BshFI GGCC 7 cut(s) 83, 111, 205, 634, 1085, 1372, 1437
BshNI GGYRCC 1 cut(s) 1151
BsiEI CGRYCG 1 cut(s) 1298
BsiHKAI GWGCWC 1 cut(s) 492
BsiHKCI CYCGRG 1 cut(s) 320
BsiSI CCGG 5 cut(s) 80, 216, 230, 565, 1525
BslFI GGGAC 3 cut(s) 197, 255, 1477
BslI CCNNNNNNNGG 5 cut(s) 90, 630, 645, 973, 1531
BsmAI GTCTC 3 cut(s) 162, 300, 317
BsmFI GGGAC 3 cut(s) 197, 255, 1477
BsmI GAATGC 2 cut(s) 686, 705
BsnI GGCC 7 cut(s) 83, 111, 205, 634, 1085, 1372, 1437
BsoBI CYCGRG 1 cut(s) 320
Bsp1286I GDGCHC 1 cut(s) 492
Bsp13I TCCGGA 1 cut(s) 1524
Bsp143I GATC 5 cut(s) 588, 709, 1116, 1327, 1348
Bsp19I CCATGG 1 cut(s) 174
BspACI CCGC 7 cut(s) 74, 103, 137, 219, 263, 515, 1294
BspANI GGCC 7 cut(s) 83, 111, 205, 634, 1085, 1372, 1437
BspCNI CTCAG 4 cut(s) 310, 1015, 1170, 1257
BspEI TCCGGA 1 cut(s) 1524
BspFNI CGCG 1 cut(s) 134
BspLI GGNNCC 6 cut(s) 78, 110, 204, 213, 563, 1153
BspMAI CTGCAG 1 cut(s) 331
BspMI ACCTGC 2 cut(s) 562, 993
BspPI GGATC 3 cut(s) 704, 1111, 1322
BspQI GCTCTTC 2 cut(s) 480, 953
BspT107I GGYRCC 1 cut(s) 1151
BsrBI CCGCTC 2 cut(s) 103, 1294
BsrDI GCAATG 2 cut(s) 859, 1218
BsrI ACTGG 2 cut(s) 639, 1338
BssECI CCNNGG 5 cut(s) 174, 214, 1159, 1438, 1447
BssHII GCGCGC 1 cut(s) 132
BssMI GATC 5 cut(s) 588, 709, 1116, 1327, 1348
BssSI CACGAG 1 cut(s) 657
BssT1I CCWWGG 3 cut(s) 174, 1159, 1438
Bst2BI CACGAG 1 cut(s) 657
Bst2UI CCWGG 1 cut(s) 113
Bst4CI ACNGT 5 cut(s) 246, 251, 841, 1367, 1468
Bst6I CTCTTC 2 cut(s) 480, 953
BstAPI GCANNNNNTGC 2 cut(s) 713, 854
BstC8I GCNNGC 8 cut(s) 9, 72, 134, 284, 570, 705, 744, 850
BstDEI CTNAG 6 cut(s) 297, 971, 1023, 1178, 1265, 1500
BstDSI CCRYGG 1 cut(s) 174
BstF5I GGATG 2 cut(s) 99, 480
BstFNI CGCG 1 cut(s) 134
BstH2I RGCGCY 2 cut(s) 193, 824
BstHHI GCGC 5 cut(s) 134, 136, 192, 664, 823
BstKTI GATC 5 cut(s) 591, 712, 1119, 1330, 1351
BstMAI GTCTC 3 cut(s) 162, 300, 317
BstMBI GATC 5 cut(s) 588, 709, 1116, 1327, 1348
BstMCI CGRYCG 1 cut(s) 1298
BstMWI GCNNNNNNNGC 7 cut(s) 80, 131, 260, 626, 713, 854, 1547
BstNI CCWGG 1 cut(s) 113
BstNSI RCATGY 2 cut(s) 295, 852
BstSCI CCNGG 2 cut(s) 111, 214
BstSFI CTRYAG 1 cut(s) 327
BstUI CGCG 1 cut(s) 134
BstV1I GCAGC 4 cut(s) 61, 179, 733, 1006
BstX2I RGATCY 1 cut(s) 709
BstYI RGATCY 1 cut(s) 709
BsuRI GGCC 7 cut(s) 83, 111, 205, 634, 1085, 1372, 1437
BtgI CCRYGG 1 cut(s) 174
BtgZI GCGATG 1 cut(s) 417
BtsCI GGATG 2 cut(s) 99, 480
BtsIMutI CAGTG 2 cut(s) 1262, 1331
BveI ACCTGC 2 cut(s) 562, 993
Cac8I GCNNGC 8 cut(s) 9, 72, 134, 284, 570, 705, 744, 850
CaiI CAGNNNCTG 1 cut(s) 713
CfoI GCGC 5 cut(s) 134, 136, 192, 664, 823
Cfr13I GGNCC 6 cut(s) 82, 109, 203, 211, 227, 1084
Csp6I GTAC 3 cut(s) 247, 642, 833
CviAII CATG 3 cut(s) 175, 292, 849
CviQI GTAC 3 cut(s) 247, 642, 833
DdeI CTNAG 6 cut(s) 297, 971, 1023, 1178, 1265, 1500
DpnI GATC 5 cut(s) 590, 711, 1118, 1329, 1350
DpnII GATC 5 cut(s) 588, 709, 1116, 1327, 1348
DraIII CACNNNGTG 1 cut(s) 13
Eam1104I CTCTTC 2 cut(s) 480, 953
EarI CTCTTC 2 cut(s) 480, 953
Ecl136II GAGCTC 1 cut(s) 490
Eco130I CCWWGG 3 cut(s) 174, 1159, 1438
Eco147I AGGCCT 1 cut(s) 1372
Eco24I GRGCYC 1 cut(s) 492
Eco32I GATATC 1 cut(s) 1184
Eco47I GGWCC 2 cut(s) 211, 227
Eco47III AGCGCT 1 cut(s) 191
Eco53kI GAGCTC 1 cut(s) 490
Eco57I CTGAAG 2 cut(s) 140, 747
Eco88I CYCGRG 1 cut(s) 320
EcoICRI GAGCTC 1 cut(s) 490
EcoO109I RGGNCCY 1 cut(s) 109
EcoRII CCWGG 1 cut(s) 111
EcoRV GATATC 1 cut(s) 1184
EcoT14I CCWWGG 3 cut(s) 174, 1159, 1438
EcoT38I GRGCYC 1 cut(s) 492
ErhI CCWWGG 3 cut(s) 174, 1159, 1438
FaeI CATG 3 cut(s) 178, 295, 852
FaqI GGGAC 3 cut(s) 197, 255, 1477
FatI CATG 3 cut(s) 174, 291, 848
FauI CCCGC 1 cut(s) 212
FbaI TGATCA 1 cut(s) 588
FblI GTMKAC 1 cut(s) 146
Fnu4HI GCNGC 5 cut(s) 50, 137, 193, 747, 1020
FokI GGATG 2 cut(s) 106, 487
FriOI GRGCYC 1 cut(s) 492
Fsp4HI GCNGC 5 cut(s) 50, 137, 193, 747, 1020
FspBI CTAG 2 cut(s) 315, 645
GlaI GCGC 5 cut(s) 133, 135, 191, 663, 822
GluI GCNGC 5 cut(s) 50, 137, 193, 747, 1020
GsaI CCCAGC 2 cut(s) 88, 561
GsuI CTGGAG 2 cut(s) 206, 1071
HaeII RGCGCY 2 cut(s) 193, 824
HaeIII GGCC 7 cut(s) 83, 111, 205, 634, 1085, 1372, 1437
HapII CCGG 5 cut(s) 80, 216, 230, 565, 1525
HhaI GCGC 5 cut(s) 134, 136, 192, 664, 823
Hin1II CATG 3 cut(s) 178, 295, 852
Hin6I GCGC 5 cut(s) 132, 134, 190, 662, 821
HinP1I GCGC 5 cut(s) 132, 134, 190, 662, 821
HincII GTYRAC 1 cut(s) 163
HindII GTYRAC 1 cut(s) 163
HindIII AAGCTT 1 cut(s) 570
HinfI GANTC 5 cut(s) 170, 784, 1219, 1443, 1472
HpaII CCGG 5 cut(s) 80, 216, 230, 565, 1525
HphI GGTGA 3 cut(s) 392, 401, 1546
Hpy166II GTNNAC 6 cut(s) 147, 163, 1000, 1339, 1363, 1471
Hpy188I TCNGA 5 cut(s) 93, 154, 300, 1345, 1378
Hpy188III TCNNGA 9 cut(s) 19, 55, 272, 482, 668, 681, 781, 1385, 1525
Hpy8I GTNNAC 6 cut(s) 147, 163, 1000, 1339, 1363, 1471
Hpy99I CGWCG 3 cut(s) 61, 211, 443
HpyCH4III ACNGT 5 cut(s) 246, 251, 841, 1367, 1468
HpyCH4IV ACGT 2 cut(s) 831, 926
HpyF10VI GCNNNNNNNGC 7 cut(s) 80, 131, 260, 626, 713, 854, 1547
HpyF3I CTNAG 6 cut(s) 297, 971, 1023, 1178, 1265, 1500
HpySE526I ACGT 2 cut(s) 831, 926
Hsp92II CATG 3 cut(s) 178, 295, 852
HspAI GCGC 5 cut(s) 132, 134, 190, 662, 821
Kpn2I TCCGGA 1 cut(s) 1524
Ksp22I TGATCA 1 cut(s) 588
Kzo9I GATC 5 cut(s) 588, 709, 1116, 1327, 1348
LguI GCTCTTC 2 cut(s) 480, 953
LmnI GCTCC 6 cut(s) 57, 100, 187, 883, 942, 1052
Lsp1109I GCAGC 4 cut(s) 61, 179, 733, 1006
LweI GCATC 4 cut(s) 57, 145, 502, 1461
MaeI CTAG 2 cut(s) 315, 645
MaeII ACGT 2 cut(s) 831, 926
MaeIII GTNAC 6 cut(s) 265, 841, 870, 927, 1111, 1534
MalI GATC 5 cut(s) 590, 711, 1118, 1329, 1350
MbiI CCGCTC 2 cut(s) 103, 1294
MboI GATC 5 cut(s) 588, 709, 1116, 1327, 1348
MboII GAAGA 5 cut(s) 497, 753, 970, 1000, 1540
MfeI CAATTG 1 cut(s) 753
MflI RGATCY 1 cut(s) 709
MhlI GDGCHC 1 cut(s) 492
MluCI AATT 7 cut(s) 30, 127, 503, 753, 977, 1075, 1283
MlyI GAGTC 3 cut(s) 164, 1437, 1466
MmeI TCCRAC 1 cut(s) 1018
MroI TCCGGA 1 cut(s) 1524
MroXI GAANNNNTTC 1 cut(s) 902
MslI CAYNNNNRTG 3 cut(s) 179, 1227, 1344
MspI CCGG 5 cut(s) 80, 216, 230, 565, 1525
MspR9I CCNGG 2 cut(s) 113, 216
MunI CAATTG 1 cut(s) 753
Mva1269I GAATGC 2 cut(s) 686, 705
MvaI CCWGG 1 cut(s) 113
MvnI CGCG 1 cut(s) 134
MwoI GCNNNNNNNGC 7 cut(s) 80, 131, 260, 626, 713, 854, 1547
NciI CCSGG 1 cut(s) 216
NcoI CCATGG 1 cut(s) 174
NdeII GATC 5 cut(s) 588, 709, 1116, 1327, 1348
NlaIII CATG 3 cut(s) 178, 295, 852
NlaIV GGNNCC 6 cut(s) 78, 110, 204, 213, 563, 1153
NmeAIII GCCGAG 1 cut(s) 1428
NmuCI GTSAC 3 cut(s) 870, 1111, 1534
NspI RCATGY 2 cut(s) 295, 852
PaeI GCATGC 1 cut(s) 852
PauI GCGCGC 1 cut(s) 132
PceI AGGCCT 1 cut(s) 1372
PciI ACATGT 1 cut(s) 291
PciSI GCTCTTC 2 cut(s) 480, 953
PcsI WCGNNNNNNNCGW 1 cut(s) 53
PctI GAATGC 2 cut(s) 686, 705
PdmI GAANNNNTTC 1 cut(s) 902
PfeI GAWTC 2 cut(s) 784, 1219
PkrI GCNGC 5 cut(s) 51, 138, 194, 748, 1021
PleI GAGTC 3 cut(s) 164, 1437, 1466
PpsI GAGTC 3 cut(s) 164, 1437, 1466
PscI ACATGT 1 cut(s) 291
PsiI TTATAA 1 cut(s) 827
Psp124BI GAGCTC 1 cut(s) 492
Psp6I CCWGG 1 cut(s) 111
PspFI CCCAGC 2 cut(s) 84, 557
PspGI CCWGG 1 cut(s) 111
PspN4I GGNNCC 6 cut(s) 78, 110, 204, 213, 563, 1153
PspPI GGNCC 6 cut(s) 82, 109, 203, 211, 227, 1084
PsrI GAACNNNNNNTAC 2 cut(s) 239, 271
PstI CTGCAG 1 cut(s) 331
PstNI CAGNNNCTG 1 cut(s) 713
PsuI RGATCY 1 cut(s) 709
PteI GCGCGC 1 cut(s) 132
RsaI GTAC 3 cut(s) 248, 643, 834
RsaNI GTAC 3 cut(s) 247, 642, 833
RseI CAYNNNNRTG 3 cut(s) 179, 1227, 1344
SacI GAGCTC 1 cut(s) 492
SapI GCTCTTC 2 cut(s) 480, 953
SatI GCNGC 5 cut(s) 50, 137, 193, 747, 1020
Sau3AI GATC 5 cut(s) 588, 709, 1116, 1327, 1348
Sau96I GGNCC 6 cut(s) 82, 109, 203, 211, 227, 1084
ScaI AGTACT 1 cut(s) 643
SchI GAGTC 3 cut(s) 164, 1437, 1466
ScrFI CCNGG 2 cut(s) 113, 216
SduI GDGCHC 1 cut(s) 492
SfaNI GCATC 4 cut(s) 57, 145, 502, 1461
SfcI CTRYAG 1 cut(s) 327
SinI GGWCC 2 cut(s) 211, 227
SmiMI CAYNNNNRTG 3 cut(s) 179, 1227, 1344
SmlI CTYRAG 1 cut(s) 272
SmoI CTYRAG 1 cut(s) 272
SphI GCATGC 1 cut(s) 852
Sse9I AATT 7 cut(s) 30, 127, 503, 753, 977, 1075, 1283
SseBI AGGCCT 1 cut(s) 1372
SsiI CCGC 7 cut(s) 74, 103, 137, 219, 263, 515, 1294
SspMI CTAG 2 cut(s) 315, 645
SstI GAGCTC 1 cut(s) 492
StuI AGGCCT 1 cut(s) 1372
StyD4I CCNGG 2 cut(s) 111, 214
StyI CCWWGG 3 cut(s) 174, 1159, 1438
TaaI ACNGT 5 cut(s) 246, 251, 841, 1367, 1468
TaiI ACGT 2 cut(s) 834, 929
TaqI TCGA 2 cut(s) 288, 1298
TaqII GACCGA 1 cut(s) 199
TasI AATT 7 cut(s) 30, 127, 503, 753, 977, 1075, 1283
TatI WGTACW 1 cut(s) 641
TauI GCSGC 1 cut(s) 139
TfiI GAWTC 2 cut(s) 784, 1219
TscAI CASTG 2 cut(s) 1269, 1338
TseFI GTSAC 3 cut(s) 870, 1111, 1534
TseI GCWGC 4 cut(s) 49, 192, 746, 1019
Tsp45I GTSAC 3 cut(s) 870, 1111, 1534
TspDTI ATGAA 6 cut(s) 251, 465, 591, 679, 879, 1232
TspGWI ACGGA 2 cut(s) 132, 180
TspRI CASTG 2 cut(s) 1269, 1338
VpaK11BI GGWCC 2 cut(s) 211, 227
XapI RAATTY 3 cut(s) 503, 977, 1075
XceI RCATGY 2 cut(s) 295, 852
XcmI CCANNNNNNNNNTGG 1 cut(s) 181
XmiI GTMKAC 1 cut(s) 146
XmnI GAANNNNTTC 1 cut(s) 902
XspI CTAG 2 cut(s) 315, 645
ZrmI AGTACT 1 cut(s) 643
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.