Rmu_sc0008131.1_g000006

Protein RETICULATA-related

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0008131.1
OG0014588
Physical Location & Seq
Forward (+)
12873 .. 18745
5873 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0008131.1_g000006.1.cds

Sequence Viewer

Length: 1569 bp
atgtctcacgcagtgttccacaccgctcaattcatgcccatgaacacgcagctccccaagaagcccaggctggcggggcccctacagccgatgattgctcaaccgctcaagctccggcggggtctggcggtcaaggcctgctgtgcgtctccgtctacttccgactcggtggaggggcagtcggccaccttgttggagcgctgcttcgtggcgccgtcgtcgtcgccagcggcgagccgtgagttcggtccggttatgaaggggcagtacggtgcttttggtgccgtgacgcttgagaaggggaagctggatatgactcagaagcaatccaagtctagccccgagctgcaaactggcggaggtggtggagatattggaaagaggataaatcatggaggtggtgatggaggtgacgatgatggcgatgatgatgattattttgatgactttgatgacggtgatgagggggatgagggtggcctttttagaaaacgcatgtttcttgaagagctgtttgatcgcaaatttgtagatgcagttttgaacgagtggcaaaagacaatgatggatttaccagccggctttcggcaagcttatgaaatgggattggtcagctctgctcaaatggtaagattcttagcaaccaatgccaggccaaccactactaggttcatttctcgttcacttcctgatggggtatcaagggcattcattggcagaatgcttgcagatcctgctttcttgtataggcttctgttagagcaggttgggacgattggttgctcagtttggtgggaagtaaagactcgtaaggaaaggataaagcaagaatgggatctggcacttataaatgtgctcacagtagcagcatgcaatgctgttgttgtctggtcacttgctccttgtcgttcatatgggaacacattcaggtttgatttgcaaaatacattgcaaaagctccccaacaatatatttgagaagagctacccaatgagggaatttgacctgccaaggagagttcattctttcttctataaggctgctgagttgtgtatggttggactatctgccggagcagttcaaggcgctttatcaaactttttatcccataaaaaggaggaaaggttatcggtaacgatccctagtgtgaaagcaaatgcacttggttatggtgccttcctaggactttatgcgaatctgagatatcagctgttatgtggatttgatagagctgtgatgaaccattttgatgttattggagtggcgctggttctaagcacggcattcagggttttgaatattcagttaggtgagagatcaaggttggcttggcttggcgtggaggctgatccgctggttcagtcggatgatcttttgaaggcttacagtaggccttctgagagtgttgatcggtcctctccaaaatggtttatatcaaagaatgctgttgtatctggacttgggctccttggcattaaacaaaggaatgatgactctgttggtgagggggagtcttcagcccccaagacacgtagaaagaggattgtccggaagaaggtggctgcatag
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
RETICULATA-like

Protein Analysis

522

Amino Acids

57.54

Weight (kDa)

9.02

Isoelectric Point (pI)

44.41

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0014588)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G24690
fragaria_vesca FvH4_5g29610
malus_domestica MD08G1228000.v1.1 MD15G1422000.v1.1
prunus_persica Prupe.1G567400_v2.0.a1
pyrus_communis pycom08g19880 pycom15g37400
rosa_chinensis RchiOBHm_Chr7g0222671
rosa_laevigata RLG00000002033 RLG00000002034 RLG00000002035
rosa_multiflora Rmu_sc0008131.1_g000006
rosa_roxburghii Rroxscaffold_3G00236560
rosa_rugosa Rorug07G0211900
rosa_samantha Rh7AG355800 Rh7BG344300
rosa_wichuraiana Rw7G030190

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 848
Acc36I ACCTGC 2 cut(s) 754, 1014
AccB1I GGYRCC 3 cut(s) 211, 281, 1172
AccBSI CCGCTC 2 cut(s) 26, 106
AccI GTMKAC 1 cut(s) 155
AccIII TCCGGA 1 cut(s) 1548
AciI CCGC 8 cut(s) 24, 74, 104, 118, 128, 230, 357, 1352
AclWI GGATC 4 cut(s) 725, 843, 1132, 1343
AcoI YGGCCR 1 cut(s) 183
AcsI RAATTY 2 cut(s) 524, 998
AcuI CTGAAG 1 cut(s) 1500
AcyI GRCGYC 1 cut(s) 212
AdeI CACNNNGTG 1 cut(s) 13
AfaI GTAC 1 cut(s) 269
AfeI AGCGCT 1 cut(s) 200
AfiI CCNNNNNNNGG 6 cut(s) 585, 651, 666, 994, 1114, 1555
AflIII ACRYGT 1 cut(s) 1529
AgsI TTSAA 5 cut(s) 506, 544, 1082, 1297, 1378
AjnI CCWGG 2 cut(s) 65, 650
Alw21I GWGCWC 1 cut(s) 858
Alw26I GTCTC 2 cut(s) 9, 153
AlwI GGATC 4 cut(s) 725, 843, 1132, 1343
AlwNI CAGNNNCTG 1 cut(s) 734
Ama87I CYCGRG 1 cut(s) 341
Aor13HI TCCGGA 1 cut(s) 1548
Aor51HI AGCGCT 1 cut(s) 200
AoxI GGCC 6 cut(s) 77, 135, 183, 478, 653, 1391
ApaI GGGCCC 1 cut(s) 81
ApeKI GCWGC 6 cut(s) 49, 201, 346, 866, 1040, 1562
ApoI RAATTY 2 cut(s) 524, 998
Asp700I GAANNNNTTC 1 cut(s) 923
AspA2I CCTAGG 1 cut(s) 1180
AspLEI GCGC 4 cut(s) 201, 214, 1088, 1267
AspS9I GGNCC 4 cut(s) 77, 78, 248, 1413
AsuHPI GGTGA 5 cut(s) 413, 422, 470, 1322, 1514
AvaI CYCGRG 1 cut(s) 341
AvaII GGWCC 2 cut(s) 248, 1413
AvrII CCTAGG 1 cut(s) 1180
BaeGI GKGCMC 1 cut(s) 81
BanI GGYRCC 3 cut(s) 211, 281, 1172
BanII GRGCYC 2 cut(s) 81, 1467
BarI GAAGNNNNNNTAC 2 cut(s) 251, 283
BbsI GAAGAC 1 cut(s) 1506
Bbv12I GWGCWC 1 cut(s) 858
BbvI GCAGC 6 cut(s) 61, 188, 333, 878, 1027, 1549
BccI CCATC 4 cut(s) 398, 413, 559, 686
BceAI ACGGC 4 cut(s) 199, 222, 269, 1296
BciT130I CCWGG 2 cut(s) 67, 652
BcoDI GTCTC 2 cut(s) 9, 153
BfaI CTAG 4 cut(s) 336, 666, 1143, 1181
BfmI CTRYAG 1 cut(s) 83
BfoI RGCGCY 4 cut(s) 202, 215, 1089, 1268
BfuAI ACCTGC 2 cut(s) 754, 1014
BisI GCNGC 7 cut(s) 50, 202, 231, 347, 867, 1041, 1563
BlnI CCTAGG 1 cut(s) 1180
BlsI GCNGC 7 cut(s) 51, 203, 232, 348, 868, 1042, 1564
Bme1390I CCNGG 2 cut(s) 67, 652
Bme18I GGWCC 2 cut(s) 248, 1413
BmeT110I CYCGRG 1 cut(s) 341
BmgT120I GGNCC 4 cut(s) 77, 78, 248, 1413
BmiI GGNNCC 7 cut(s) 78, 79, 80, 213, 283, 1174, 1466
BmrFI CCNGG 2 cut(s) 67, 652
BmsI GCATC 1 cut(s) 523
BpiI GAAGAC 1 cut(s) 1506
BpuEI CTTGAG 2 cut(s) 92, 314
BsaAI YACGTR 1 cut(s) 1532
BsaHI GRCGYC 1 cut(s) 212
BsaJI CCNNGG 4 cut(s) 65, 1010, 1180, 1468
BsaWI WCCGGW 2 cut(s) 250, 1548
BsaXI ACNNNNNCTCC 6 cut(s) 164, 194, 1109, 1139, 1449, 1479
Bsc4I CCNNNNNNNGG 6 cut(s) 585, 651, 666, 994, 1114, 1555
Bse118I RCCGGY 1 cut(s) 578
Bse1I ACTGG 1 cut(s) 358
Bse3DI GCAATG 2 cut(s) 880, 947
BseAI TCCGGA 1 cut(s) 1548
BseBI CCWGG 2 cut(s) 67, 652
BseDI CCNNGG 4 cut(s) 65, 1010, 1180, 1468
BseGI GGATG 2 cut(s) 475, 1372
BseLI CCNNNNNNNGG 6 cut(s) 585, 651, 666, 994, 1114, 1555
BseMI GCAATG 2 cut(s) 880, 947
BseMII CTCAG 5 cut(s) 332, 798, 1035, 1190, 1389
BseNI ACTGG 1 cut(s) 358
BseSI GKGCMC 1 cut(s) 81
BseXI GCAGC 6 cut(s) 61, 188, 333, 878, 1027, 1549
BshFI GGCC 6 cut(s) 79, 137, 185, 480, 655, 1393
BshNI GGYRCC 3 cut(s) 211, 281, 1172
BsiHKAI GWGCWC 1 cut(s) 858
BsiHKCI CYCGRG 1 cut(s) 341
BsiSI CCGG 5 cut(s) 115, 251, 579, 1071, 1549
BslFI GGGAC 1 cut(s) 784
BslI CCNNNNNNNGG 6 cut(s) 585, 651, 666, 994, 1114, 1555
BsmAI GTCTC 2 cut(s) 9, 153
BsmBI CGTCTC 1 cut(s) 153
BsmFI GGGAC 1 cut(s) 784
BsmI GAATGC 4 cut(s) 707, 726, 1283, 1447
BsnI GGCC 6 cut(s) 79, 137, 185, 480, 655, 1393
BsoBI CYCGRG 1 cut(s) 341
Bsp120I GGGCCC 1 cut(s) 77
Bsp1286I GDGCHC 3 cut(s) 81, 858, 1467
Bsp13I TCCGGA 1 cut(s) 1548
Bsp143I GATC 8 cut(s) 517, 730, 835, 1137, 1316, 1348, 1369, 1408
BspACI CCGC 8 cut(s) 24, 74, 104, 118, 128, 230, 357, 1352
BspANI GGCC 6 cut(s) 79, 137, 185, 480, 655, 1393
BspCNI CTCAG 5 cut(s) 331, 797, 1036, 1191, 1390
BspEI TCCGGA 1 cut(s) 1548
BspLI GGNNCC 7 cut(s) 78, 79, 80, 213, 283, 1174, 1466
BspMI ACCTGC 2 cut(s) 754, 1014
BspPI GGATC 4 cut(s) 725, 843, 1132, 1343
BspQI GCTCTTC 2 cut(s) 501, 974
BspT107I GGYRCC 3 cut(s) 211, 281, 1172
BsrBI CCGCTC 2 cut(s) 26, 106
BsrDI GCAATG 2 cut(s) 880, 947
BsrFI RCCGGY 1 cut(s) 578
BsrI ACTGG 1 cut(s) 358
BssAI RCCGGY 1 cut(s) 578
BssECI CCNNGG 4 cut(s) 65, 1010, 1180, 1468
BssMI GATC 8 cut(s) 517, 730, 835, 1137, 1316, 1348, 1369, 1408
BssNI GRCGYC 1 cut(s) 212
BssT1I CCWWGG 3 cut(s) 1010, 1180, 1468
Bst2UI CCWGG 2 cut(s) 67, 652
Bst4CI ACNGT 4 cut(s) 272, 458, 862, 1388
Bst6I CTCTTC 2 cut(s) 501, 974
BstACI GRCGYC 1 cut(s) 212
BstAPI GCANNNNNTGC 3 cut(s) 647, 734, 875
BstBAI YACGTR 1 cut(s) 1532
BstC8I GCNNGC 8 cut(s) 72, 139, 228, 235, 580, 591, 726, 871
BstDEI CTNAG 7 cut(s) 318, 637, 784, 1044, 1199, 1274, 1398
BstF5I GGATG 2 cut(s) 475, 1372
BstH2I RGCGCY 4 cut(s) 202, 215, 1089, 1268
BstHHI GCGC 4 cut(s) 201, 214, 1088, 1267
BstKTI GATC 8 cut(s) 520, 733, 838, 1140, 1319, 1351, 1372, 1411
BstMAI GTCTC 2 cut(s) 9, 153
BstMBI GATC 8 cut(s) 517, 730, 835, 1137, 1316, 1348, 1369, 1408
BstMWI GCNNNNNNNGC 8 cut(s) 76, 85, 134, 143, 281, 647, 734, 875
BstNI CCWGG 2 cut(s) 67, 652
BstNSI RCATGY 2 cut(s) 499, 873
BstSCI CCNGG 2 cut(s) 65, 650
BstSFI CTRYAG 1 cut(s) 83
BstSLI GKGCMC 1 cut(s) 81
BstV1I GCAGC 6 cut(s) 61, 188, 333, 878, 1027, 1549
BstV2I GAAGAC 1 cut(s) 1506
BstX2I RGATCY 2 cut(s) 730, 835
BstXI CCANNNNNNTGG 1 cut(s) 193
BstYI RGATCY 2 cut(s) 730, 835
BsuRI GGCC 6 cut(s) 79, 137, 185, 480, 655, 1393
BtgZI GCGATG 1 cut(s) 438
BtsCI GGATG 2 cut(s) 475, 1372
BtsI GCAGTG 1 cut(s) 18
BtsIMutI CAGTG 1 cut(s) 18
BveI ACCTGC 2 cut(s) 754, 1014
Cac8I GCNNGC 8 cut(s) 72, 139, 228, 235, 580, 591, 726, 871
CaiI CAGNNNCTG 1 cut(s) 734
CfoI GCGC 4 cut(s) 201, 214, 1088, 1267
Cfr10I RCCGGY 1 cut(s) 578
Cfr13I GGNCC 4 cut(s) 77, 78, 248, 1413
CpoI CGGWCCG 1 cut(s) 248
CseI GACGC 2 cut(s) 135, 298
Csp6I GTAC 1 cut(s) 268
CspI CGGWCCG 1 cut(s) 248
CviAII CATG 5 cut(s) 34, 40, 392, 496, 870
CviQI GTAC 1 cut(s) 268
DdeI CTNAG 7 cut(s) 318, 637, 784, 1044, 1199, 1274, 1398
DinI GGCGCC 1 cut(s) 213
DpnI GATC 8 cut(s) 519, 732, 837, 1139, 1318, 1350, 1371, 1410
DpnII GATC 8 cut(s) 517, 730, 835, 1137, 1316, 1348, 1369, 1408
DraIII CACNNNGTG 1 cut(s) 13
EaeI YGGCCR 1 cut(s) 183
Eam1104I CTCTTC 2 cut(s) 501, 974
EarI CTCTTC 2 cut(s) 501, 974
EciI GGCGGA 1 cut(s) 372
Eco130I CCWWGG 3 cut(s) 1010, 1180, 1468
Eco147I AGGCCT 2 cut(s) 137, 1393
Eco24I GRGCYC 2 cut(s) 81, 1467
Eco32I GATATC 1 cut(s) 1205
Eco47I GGWCC 2 cut(s) 248, 1413
Eco47III AGCGCT 1 cut(s) 200
Eco57I CTGAAG 1 cut(s) 1500
Eco88I CYCGRG 1 cut(s) 341
EcoO109I RGGNCCY 2 cut(s) 77, 78
EcoRII CCWGG 2 cut(s) 65, 650
EcoRV GATATC 1 cut(s) 1205
EcoT14I CCWWGG 3 cut(s) 1010, 1180, 1468
EcoT38I GRGCYC 2 cut(s) 81, 1467
EgeI GGCGCC 1 cut(s) 213
EheI GGCGCC 1 cut(s) 213
ErhI CCWWGG 3 cut(s) 1010, 1180, 1468
Esp3I CGTCTC 1 cut(s) 153
FaeI CATG 5 cut(s) 37, 43, 395, 499, 873
FalI AAGNNNNNCTT 2 cut(s) 1312, 1344
FaqI GGGAC 1 cut(s) 784
FatI CATG 5 cut(s) 33, 39, 391, 495, 869
FauI CCCGC 2 cut(s) 67, 111
FauNDI CATATG 1 cut(s) 913
FblI GTMKAC 1 cut(s) 155
Fnu4HI GCNGC 7 cut(s) 50, 202, 231, 347, 867, 1041, 1563
FokI GGATG 2 cut(s) 482, 1379
FriOI GRGCYC 2 cut(s) 81, 1467
Fsp4HI GCNGC 7 cut(s) 50, 202, 231, 347, 867, 1041, 1563
FspBI CTAG 4 cut(s) 336, 666, 1143, 1181
GlaI GCGC 4 cut(s) 200, 213, 1087, 1266
GluI GCNGC 7 cut(s) 50, 202, 231, 347, 867, 1041, 1563
HaeII RGCGCY 4 cut(s) 202, 215, 1089, 1268
HaeIII GGCC 6 cut(s) 79, 137, 185, 480, 655, 1393
HapII CCGG 5 cut(s) 115, 251, 579, 1071, 1549
HgaI GACGC 2 cut(s) 135, 298
HhaI GCGC 4 cut(s) 201, 214, 1088, 1267
Hin1I GRCGYC 1 cut(s) 212
Hin1II CATG 5 cut(s) 37, 43, 395, 499, 873
Hin6I GCGC 4 cut(s) 199, 212, 1086, 1265
HinP1I GCGC 4 cut(s) 199, 212, 1086, 1265
HindIII AAGCTT 1 cut(s) 591
HinfI GANTC 7 cut(s) 164, 316, 633, 805, 1195, 1493, 1511
HpaII CCGG 5 cut(s) 115, 251, 579, 1071, 1549
HphI GGTGA 5 cut(s) 413, 422, 470, 1322, 1514
Hpy166II GTNNAC 2 cut(s) 156, 683
Hpy188I TCNGA 5 cut(s) 163, 321, 1200, 1366, 1399
Hpy188III TCNNGA 4 cut(s) 503, 689, 1455, 1549
Hpy8I GTNNAC 2 cut(s) 156, 683
Hpy99I CGWCG 3 cut(s) 220, 223, 226
HpyAV CCTTC 6 cut(s) 253, 292, 1186, 1372, 1404, 1549
HpyCH4III ACNGT 4 cut(s) 272, 458, 862, 1388
HpyCH4IV ACGT 1 cut(s) 1531
HpyCH4V TGCA 8 cut(s) 349, 536, 728, 873, 940, 952, 1160, 1565
HpyF10VI GCNNNNNNNGC 8 cut(s) 76, 85, 134, 143, 281, 647, 734, 875
HpyF3I CTNAG 7 cut(s) 318, 637, 784, 1044, 1199, 1274, 1398
HpySE526I ACGT 1 cut(s) 1531
Hsp92I GRCGYC 1 cut(s) 212
Hsp92II CATG 5 cut(s) 37, 43, 395, 499, 873
HspAI GCGC 4 cut(s) 199, 212, 1086, 1265
KasI GGCGCC 1 cut(s) 211
Kpn2I TCCGGA 1 cut(s) 1548
KroI GCCGGC 1 cut(s) 578
KroNI GCCGGC 1 cut(s) 580
Kzo9I GATC 8 cut(s) 517, 730, 835, 1137, 1316, 1348, 1369, 1408
LguI GCTCTTC 2 cut(s) 501, 974
LmnI GCTCC 7 cut(s) 57, 117, 196, 904, 963, 1073, 1470
Lsp1109I GCAGC 6 cut(s) 61, 188, 333, 878, 1027, 1549
LweI GCATC 1 cut(s) 523
MaeI CTAG 4 cut(s) 336, 666, 1143, 1181
MaeII ACGT 1 cut(s) 1531
MaeIII GTNAC 4 cut(s) 286, 410, 891, 1132
MalI GATC 8 cut(s) 519, 732, 837, 1139, 1318, 1350, 1371, 1410
MbiI CCGCTC 2 cut(s) 26, 106
MboI GATC 8 cut(s) 517, 730, 835, 1137, 1316, 1348, 1369, 1408
MboII GAAGA 5 cut(s) 518, 991, 1021, 1506, 1564
MflI RGATCY 2 cut(s) 730, 835
MhlI GDGCHC 3 cut(s) 81, 858, 1467
MluCI AATT 3 cut(s) 29, 524, 998
Mly113I GGCGCC 1 cut(s) 212
MlyI GAGTC 5 cut(s) 158, 310, 799, 1487, 1520
MmeI TCCRAC 4 cut(s) 174, 186, 1039, 1344
MroI TCCGGA 1 cut(s) 1548
MroNI GCCGGC 1 cut(s) 578
MroXI GAANNNNTTC 1 cut(s) 923
MseI TTAA 1 cut(s) 1476
MslI CAYNNNNRTG 3 cut(s) 38, 396, 1248
MspA1I CMGCKG 3 cut(s) 230, 1210, 1354
MspI CCGG 5 cut(s) 115, 251, 579, 1071, 1549
MspR9I CCNGG 2 cut(s) 67, 652
Mva1269I GAATGC 4 cut(s) 707, 726, 1283, 1447
MvaI CCWGG 2 cut(s) 67, 652
MwoI GCNNNNNNNGC 8 cut(s) 76, 85, 134, 143, 281, 647, 734, 875
NaeI GCCGGC 1 cut(s) 580
NarI GGCGCC 1 cut(s) 212
NdeI CATATG 1 cut(s) 913
NdeII GATC 8 cut(s) 517, 730, 835, 1137, 1316, 1348, 1369, 1408
NgoMIV GCCGGC 1 cut(s) 578
NlaIII CATG 5 cut(s) 37, 43, 395, 499, 873
NlaIV GGNNCC 7 cut(s) 78, 79, 80, 213, 283, 1174, 1466
NmuCI GTSAC 3 cut(s) 286, 410, 891
NspI RCATGY 2 cut(s) 499, 873
PaeI GCATGC 1 cut(s) 873
PceI AGGCCT 2 cut(s) 137, 1393
PciSI GCTCTTC 2 cut(s) 501, 974
PcsI WCGNNNNNNNCGW 2 cut(s) 230, 420
PctI GAATGC 4 cut(s) 707, 726, 1283, 1447
PdiI GCCGGC 1 cut(s) 580
PdmI GAANNNNTTC 1 cut(s) 923
PfeI GAWTC 2 cut(s) 633, 1195
PkrI GCNGC 7 cut(s) 51, 203, 232, 348, 868, 1042, 1564
PleI GAGTC 5 cut(s) 158, 310, 799, 1487, 1519
PluTI GGCGCC 1 cut(s) 215
PpsI GAGTC 5 cut(s) 158, 310, 799, 1487, 1519
Ppu21I YACGTR 1 cut(s) 1532
PsiI TTATAA 1 cut(s) 848
Psp6I CCWGG 2 cut(s) 65, 650
PspGI CCWGG 2 cut(s) 65, 650
PspN4I GGNNCC 7 cut(s) 78, 79, 80, 213, 283, 1174, 1466
PspOMI GGGCCC 1 cut(s) 77
PspPI GGNCC 4 cut(s) 77, 78, 248, 1413
PstNI CAGNNNCTG 1 cut(s) 734
PsuI RGATCY 2 cut(s) 730, 835
PvuII CAGCTG 1 cut(s) 1210
RsaI GTAC 1 cut(s) 269
RsaNI GTAC 1 cut(s) 268
RseI CAYNNNNRTG 3 cut(s) 38, 396, 1248
Rsr2I CGGWCCG 1 cut(s) 248
RsrII CGGWCCG 1 cut(s) 248
SapI GCTCTTC 2 cut(s) 501, 974
SaqAI TTAA 1 cut(s) 1476
SatI GCNGC 7 cut(s) 50, 202, 231, 347, 867, 1041, 1563
Sau3AI GATC 8 cut(s) 517, 730, 835, 1137, 1316, 1348, 1369, 1408
Sau96I GGNCC 4 cut(s) 77, 78, 248, 1413
SchI GAGTC 5 cut(s) 158, 310, 799, 1487, 1520
ScrFI CCNGG 2 cut(s) 67, 652
SduI GDGCHC 3 cut(s) 81, 858, 1467
SfaNI GCATC 1 cut(s) 523
SfcI CTRYAG 1 cut(s) 83
SfoI GGCGCC 1 cut(s) 213
SinI GGWCC 2 cut(s) 248, 1413
SmiMI CAYNNNNRTG 3 cut(s) 38, 396, 1248
SmlI CTYRAG 2 cut(s) 107, 293
SmoI CTYRAG 2 cut(s) 107, 293
SphI GCATGC 1 cut(s) 873
Sse9I AATT 3 cut(s) 29, 524, 998
SseBI AGGCCT 2 cut(s) 137, 1393
SsiI CCGC 8 cut(s) 24, 74, 104, 118, 128, 230, 357, 1352
SspDI GGCGCC 1 cut(s) 211
SspI AATATT 1 cut(s) 1300
SspMI CTAG 4 cut(s) 336, 666, 1143, 1181
StuI AGGCCT 2 cut(s) 137, 1393
StyD4I CCNGG 2 cut(s) 65, 650
StyI CCWWGG 3 cut(s) 1010, 1180, 1468
TaaI ACNGT 4 cut(s) 272, 458, 862, 1388
TaiI ACGT 1 cut(s) 1534
TaqII GACCGA 2 cut(s) 236, 1401
TasI AATT 3 cut(s) 29, 524, 998
TauI GCSGC 1 cut(s) 233
TfiI GAWTC 2 cut(s) 633, 1195
Tru1I TTAA 1 cut(s) 1476
Tru9I TTAA 1 cut(s) 1476
TscAI CASTG 1 cut(s) 18
TseFI GTSAC 3 cut(s) 286, 410, 891
TseI GCWGC 6 cut(s) 49, 201, 346, 866, 1040, 1562
Tsp45I GTSAC 3 cut(s) 286, 410, 891
TspDTI ATGAA 9 cut(s) 22, 56, 272, 612, 661, 700, 900, 1010, 1253
TspGWI ACGGA 1 cut(s) 141
TspRI CASTG 1 cut(s) 18
VpaK11BI GGWCC 2 cut(s) 248, 1413
XapI RAATTY 2 cut(s) 524, 998
XceI RCATGY 2 cut(s) 499, 873
XmaJI CCTAGG 1 cut(s) 1180
XmiI GTMKAC 1 cut(s) 155
XmnI GAANNNNTTC 1 cut(s) 923
XspI CTAG 4 cut(s) 336, 666, 1143, 1181
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.