RchiOBHm_Chr7g0222671

Protein RETICULATA-related

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
7
OG0014588
Physical Location & Seq
Forward (+)
44321427 .. 44328090
6664 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ19932

Sequence Viewer

Length: 1377 bp
ATGTCTCACGCAGTGTTCCACACCGCTCAATTCATGCCCATGAACACGCAGCTCCCCAAGAAGCCCAGGCTGGCGGGGCCCCTACAGCCGATGATTGCTCAGCCGCTCAAGCTCCGGCGGGGTCTGGCGGTCAAGGCCTGCTGTGCGTCTCCGTCTACTTCCGACTCGGTGGAGGGGCAGTCGGCCACCTTGTTGGAGCGCTGCTTCGTGGCGCCGTCGTCGTCGCCGGCCGCGAGCCGTGAGTTCGGTCCGGTTATGAAGGGGCAGTACGGTGCTTTTGGTGCCGTGACGCTTGAGAAGGGGAAGCTGGATATGACTCAGAAGCAATCCAAGTCTAGCCCTGAGCTGCAAACTGGGGGAGGTGGTGGAGATATTGGAAAGAAGATAAATCATGGAGGTGGTGATGGAGGTGACGATGATGGCGATGATGATGATTACTTTGATGACTTTGATGACGGTGATGAGGGGGATGAGGGTGGCCTTTTTAGAAAACGCATGTTTCTTGAAGAGCTGTTTGATCGCAAATTTGTAGATGCAGTTTTGAACGAGTGGCAAAAGACAATGATGGATTTACCTGCCGGCTTTCGGCAAGCTTATGAAATGGGATTGGTCAGCTCCGCTCAAATGGTAAGATTCTTAGCAACCAATGCCAGACCAACCACTACTAGGTTCATTTCTCGTTCACTTCCTGATGGGGTATCAAGGGCATTCATTGGCAGAATGCTTGCAGATCCTGCTTTCTTGTATAGGTTTCTGTTAGAGCAGGTTGGGACGATTGGTTGCTCAGTTTGGTGGGAAGTAAAGACTCGTAAGGAAAGGATAAAGCAAGAATGGGATCTGGCACTTATAAATGTGCTCACAGTAGCAGCATGCAATGCTGTTGTTGTCTGGTCACTTGCTCCTTGTCGTTCATATGGGAACACATTCAGGTTTGATTTGCAAAATACATTGCAAAAGCTCCCCAACAATATATTTGAGAAGAGCTACCCAATGAGGGAATTCGACCTGCCAAGGAGAGTTCATTCCTTCTTCTATAAGGCTGCTGAGTTGTGTATGGTTGGACTATCTGCCGGAGCAGTTCAAGGCGCTTTATCAAACTTTTTATCACATAAAAAGGAGGAAAGGTTATCGGTAACGATCCCTAGTGTGAAAGCAAATGCACTTGGTTATGGTGCCTTCCTAGGACTTTATGCGAATCTGAGATATCAGCTGTTATGTGGATTTGATAGAGCTGTGATGAACCATTTTGATGTTATTGGAGTGGCGCTGGTTCTAAGCACGGCATTCAGGGTTTTGAATATTCAGTTAGGTGAGAGATCAAGGTTGGCTTGGCTTGGCGTGGAGGCTGATCCGCTGGTTCAGTCGGATGATCTTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
RETICULATA-like

Protein Analysis

458

Amino Acids

50.55

Weight (kDa)

7.0

Isoelectric Point (pI)

41.38

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
RETICULATA-like PF11891 239 - 408 1.8e-60 Protein RETICULATA-related
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0014588)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G24690
fragaria_vesca FvH4_5g29610
malus_domestica MD08G1228000.v1.1 MD15G1422000.v1.1
prunus_persica Prupe.1G567400_v2.0.a1
pyrus_communis pycom08g19880 pycom15g37400
rosa_chinensis RchiOBHm_Chr7g0222671
rosa_laevigata RLG00000002033 RLG00000002034 RLG00000002035
rosa_multiflora Rmu_sc0008131.1_g000006
rosa_roxburghii Rroxscaffold_3G00236560
rosa_rugosa Rorug07G0211900
rosa_samantha Rh7AG355800 Rh7BG344300
rosa_wichuraiana Rw7G030190

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 848
Acc36I ACCTGC 3 cut(s) 583, 754, 1014
AccB1I GGYRCC 3 cut(s) 211, 281, 1172
AccBSI CCGCTC 3 cut(s) 26, 106, 620
AccI GTMKAC 1 cut(s) 155
AccII CGCG 1 cut(s) 233
AciI CCGC 8 cut(s) 24, 74, 104, 118, 128, 231, 618, 1352
AclWI GGATC 4 cut(s) 725, 843, 1132, 1343
AcoI YGGCCR 2 cut(s) 183, 228
AcsI RAATTY 2 cut(s) 524, 998
AcyI GRCGYC 1 cut(s) 212
AdeI CACNNNGTG 1 cut(s) 13
AfaI GTAC 1 cut(s) 269
AfeI AGCGCT 1 cut(s) 200
AfiI CCNNNNNNNGG 3 cut(s) 585, 666, 994
AgsI TTSAA 4 cut(s) 506, 544, 1082, 1297
AjnI CCWGG 1 cut(s) 65
Alw21I GWGCWC 1 cut(s) 858
Alw26I GTCTC 2 cut(s) 9, 153
AlwI GGATC 4 cut(s) 725, 843, 1132, 1343
AlwNI CAGNNNCTG 1 cut(s) 734
Aor51HI AGCGCT 1 cut(s) 200
AoxI GGCC 5 cut(s) 77, 135, 183, 228, 478
ApaI GGGCCC 1 cut(s) 81
ApeKI GCWGC 5 cut(s) 49, 201, 346, 866, 1040
ApoI RAATTY 2 cut(s) 524, 998
Asp700I GAANNNNTTC 1 cut(s) 923
AspA2I CCTAGG 1 cut(s) 1180
AspLEI GCGC 4 cut(s) 201, 214, 1088, 1267
AspS9I GGNCC 3 cut(s) 77, 78, 248
AsuHPI GGTGA 4 cut(s) 413, 422, 470, 1322
AvaII GGWCC 1 cut(s) 248
AvrII CCTAGG 1 cut(s) 1180
BaeGI GKGCMC 1 cut(s) 81
BanI GGYRCC 3 cut(s) 211, 281, 1172
BanII GRGCYC 1 cut(s) 81
BarI GAAGNNNNNNTAC 2 cut(s) 251, 283
Bbv12I GWGCWC 1 cut(s) 858
BbvI GCAGC 5 cut(s) 61, 188, 333, 878, 1027
BccI CCATC 4 cut(s) 398, 413, 559, 686
BceAI ACGGC 4 cut(s) 199, 222, 269, 1296
BciT130I CCWGG 1 cut(s) 67
BcoDI GTCTC 2 cut(s) 9, 153
BfaI CTAG 4 cut(s) 336, 666, 1143, 1181
BfmI CTRYAG 1 cut(s) 83
BfoI RGCGCY 4 cut(s) 202, 215, 1089, 1268
BfuAI ACCTGC 3 cut(s) 583, 754, 1014
BisI GCNGC 7 cut(s) 50, 104, 202, 231, 347, 867, 1041
BlnI CCTAGG 1 cut(s) 1180
BlpI GCTNAGC 1 cut(s) 99
BlsI GCNGC 7 cut(s) 51, 105, 203, 232, 348, 868, 1042
Bme1390I CCNGG 1 cut(s) 67
Bme18I GGWCC 1 cut(s) 248
BmgT120I GGNCC 3 cut(s) 77, 78, 248
BmiI GGNNCC 6 cut(s) 78, 79, 80, 213, 283, 1174
BmrFI CCNGG 1 cut(s) 67
BmrI ACTGGG 1 cut(s) 363
BmsI GCATC 1 cut(s) 523
BmuI ACTGGG 1 cut(s) 363
Bpu10I CCTNAGC 1 cut(s) 342
Bpu1102I GCTNAGC 1 cut(s) 99
BpuEI CTTGAG 2 cut(s) 92, 314
BsaHI GRCGYC 1 cut(s) 212
BsaJI CCNNGG 3 cut(s) 65, 1010, 1180
BsaWI WCCGGW 1 cut(s) 250
BsaXI ACNNNNNCTCC 4 cut(s) 164, 194, 1109, 1139
Bsc4I CCNNNNNNNGG 3 cut(s) 585, 666, 994
Bse118I RCCGGY 2 cut(s) 226, 578
Bse1I ACTGG 1 cut(s) 358
Bse3DI GCAATG 2 cut(s) 880, 947
BseBI CCWGG 1 cut(s) 67
BseDI CCNNGG 3 cut(s) 65, 1010, 1180
BseGI GGATG 2 cut(s) 475, 1372
BseLI CCNNNNNNNGG 3 cut(s) 585, 666, 994
BseMI GCAATG 2 cut(s) 880, 947
BseMII CTCAG 6 cut(s) 113, 332, 333, 798, 1035, 1190
BseNI ACTGG 1 cut(s) 358
BseSI GKGCMC 1 cut(s) 81
BseX3I CGGCCG 1 cut(s) 228
BseXI GCAGC 5 cut(s) 61, 188, 333, 878, 1027
Bsh1236I CGCG 1 cut(s) 233
Bsh1285I CGRYCG 1 cut(s) 231
BshFI GGCC 5 cut(s) 79, 137, 185, 230, 480
BshNI GGYRCC 3 cut(s) 211, 281, 1172
BsiEI CGRYCG 1 cut(s) 231
BsiHKAI GWGCWC 1 cut(s) 858
BsiSI CCGG 5 cut(s) 115, 227, 251, 579, 1071
BslFI GGGAC 1 cut(s) 784
BslI CCNNNNNNNGG 3 cut(s) 585, 666, 994
BsmAI GTCTC 2 cut(s) 9, 153
BsmBI CGTCTC 1 cut(s) 153
BsmFI GGGAC 1 cut(s) 784
BsmI GAATGC 3 cut(s) 707, 726, 1283
BsnI GGCC 5 cut(s) 79, 137, 185, 230, 480
Bsp120I GGGCCC 1 cut(s) 77
Bsp1286I GDGCHC 2 cut(s) 81, 858
Bsp143I GATC 7 cut(s) 517, 730, 835, 1137, 1316, 1348, 1369
Bsp1720I GCTNAGC 1 cut(s) 99
BspACI CCGC 8 cut(s) 24, 74, 104, 118, 128, 231, 618, 1352
BspANI GGCC 5 cut(s) 79, 137, 185, 230, 480
BspCNI CTCAG 6 cut(s) 112, 331, 334, 797, 1036, 1191
BspFNI CGCG 1 cut(s) 233
BspLI GGNNCC 6 cut(s) 78, 79, 80, 213, 283, 1174
BspMI ACCTGC 3 cut(s) 583, 754, 1014
BspPI GGATC 4 cut(s) 725, 843, 1132, 1343
BspQI GCTCTTC 2 cut(s) 501, 974
BspT107I GGYRCC 3 cut(s) 211, 281, 1172
BsrBI CCGCTC 3 cut(s) 26, 106, 620
BsrDI GCAATG 2 cut(s) 880, 947
BsrFI RCCGGY 2 cut(s) 226, 578
BsrI ACTGG 1 cut(s) 358
BssAI RCCGGY 2 cut(s) 226, 578
BssECI CCNNGG 3 cut(s) 65, 1010, 1180
BssMI GATC 7 cut(s) 517, 730, 835, 1137, 1316, 1348, 1369
BssNI GRCGYC 1 cut(s) 212
BssT1I CCWWGG 2 cut(s) 1010, 1180
Bst2UI CCWGG 1 cut(s) 67
Bst4CI ACNGT 3 cut(s) 272, 458, 862
Bst6I CTCTTC 2 cut(s) 501, 974
BstACI GRCGYC 1 cut(s) 212
BstAPI GCANNNNNTGC 3 cut(s) 647, 734, 875
BstC8I GCNNGC 8 cut(s) 72, 139, 228, 235, 580, 591, 726, 871
BstDEI CTNAG 8 cut(s) 99, 318, 342, 637, 784, 1044, 1199, 1274
BstF5I GGATG 2 cut(s) 475, 1372
BstFNI CGCG 1 cut(s) 233
BstH2I RGCGCY 4 cut(s) 202, 215, 1089, 1268
BstHHI GCGC 4 cut(s) 201, 214, 1088, 1267
BstKTI GATC 7 cut(s) 520, 733, 838, 1140, 1319, 1351, 1372
BstMAI GTCTC 2 cut(s) 9, 153
BstMBI GATC 7 cut(s) 517, 730, 835, 1137, 1316, 1348, 1369
BstMCI CGRYCG 1 cut(s) 231
BstMWI GCNNNNNNNGC 9 cut(s) 76, 85, 109, 134, 143, 281, 647, 734, 875
BstNI CCWGG 1 cut(s) 67
BstNSI RCATGY 2 cut(s) 499, 873
BstSCI CCNGG 1 cut(s) 65
BstSFI CTRYAG 1 cut(s) 83
BstSLI GKGCMC 1 cut(s) 81
BstUI CGCG 1 cut(s) 233
BstV1I GCAGC 5 cut(s) 61, 188, 333, 878, 1027
BstX2I RGATCY 2 cut(s) 730, 835
BstXI CCANNNNNNTGG 1 cut(s) 193
BstYI RGATCY 2 cut(s) 730, 835
BstZI CGGCCG 1 cut(s) 228
BsuRI GGCC 5 cut(s) 79, 137, 185, 230, 480
BtgZI GCGATG 1 cut(s) 438
BtsCI GGATG 2 cut(s) 475, 1372
BtsI GCAGTG 1 cut(s) 18
BtsIMutI CAGTG 1 cut(s) 18
BveI ACCTGC 3 cut(s) 583, 754, 1014
Cac8I GCNNGC 8 cut(s) 72, 139, 228, 235, 580, 591, 726, 871
CaiI CAGNNNCTG 1 cut(s) 734
CfoI GCGC 4 cut(s) 201, 214, 1088, 1267
Cfr10I RCCGGY 2 cut(s) 226, 578
Cfr13I GGNCC 3 cut(s) 77, 78, 248
CpoI CGGWCCG 1 cut(s) 248
CseI GACGC 2 cut(s) 135, 298
Csp6I GTAC 1 cut(s) 268
CspI CGGWCCG 1 cut(s) 248
CviAII CATG 5 cut(s) 34, 40, 392, 496, 870
CviQI GTAC 1 cut(s) 268
DdeI CTNAG 8 cut(s) 99, 318, 342, 637, 784, 1044, 1199, 1274
DinI GGCGCC 1 cut(s) 213
DpnI GATC 7 cut(s) 519, 732, 837, 1139, 1318, 1350, 1371
DpnII GATC 7 cut(s) 517, 730, 835, 1137, 1316, 1348, 1369
DraIII CACNNNGTG 1 cut(s) 13
EaeI YGGCCR 2 cut(s) 183, 228
EagI CGGCCG 1 cut(s) 228
Eam1104I CTCTTC 2 cut(s) 501, 974
EarI CTCTTC 2 cut(s) 501, 974
EclXI CGGCCG 1 cut(s) 228
Eco130I CCWWGG 2 cut(s) 1010, 1180
Eco147I AGGCCT 1 cut(s) 137
Eco24I GRGCYC 1 cut(s) 81
Eco32I GATATC 1 cut(s) 1205
Eco47I GGWCC 1 cut(s) 248
Eco47III AGCGCT 1 cut(s) 200
Eco52I CGGCCG 1 cut(s) 228
EcoO109I RGGNCCY 2 cut(s) 77, 78
EcoRI GAATTC 1 cut(s) 998
EcoRII CCWGG 1 cut(s) 65
EcoRV GATATC 1 cut(s) 1205
EcoT14I CCWWGG 2 cut(s) 1010, 1180
EcoT38I GRGCYC 1 cut(s) 81
EgeI GGCGCC 1 cut(s) 213
EheI GGCGCC 1 cut(s) 213
ErhI CCWWGG 2 cut(s) 1010, 1180
Esp3I CGTCTC 1 cut(s) 153
FaeI CATG 5 cut(s) 37, 43, 395, 499, 873
FalI AAGNNNNNCTT 2 cut(s) 1312, 1344
FaqI GGGAC 1 cut(s) 784
FatI CATG 5 cut(s) 33, 39, 391, 495, 869
FauI CCCGC 2 cut(s) 67, 111
FauNDI CATATG 1 cut(s) 913
FblI GTMKAC 1 cut(s) 155
Fnu4HI GCNGC 7 cut(s) 50, 104, 202, 231, 347, 867, 1041
FokI GGATG 1 cut(s) 482
FriOI GRGCYC 1 cut(s) 81
Fsp4HI GCNGC 7 cut(s) 50, 104, 202, 231, 347, 867, 1041
FspBI CTAG 4 cut(s) 336, 666, 1143, 1181
GlaI GCGC 4 cut(s) 200, 213, 1087, 1266
GluI GCNGC 7 cut(s) 50, 104, 202, 231, 347, 867, 1041
HaeII RGCGCY 4 cut(s) 202, 215, 1089, 1268
HaeIII GGCC 5 cut(s) 79, 137, 185, 230, 480
HapII CCGG 5 cut(s) 115, 227, 251, 579, 1071
HgaI GACGC 2 cut(s) 135, 298
HhaI GCGC 4 cut(s) 201, 214, 1088, 1267
Hin1I GRCGYC 1 cut(s) 212
Hin1II CATG 5 cut(s) 37, 43, 395, 499, 873
Hin6I GCGC 4 cut(s) 199, 212, 1086, 1265
HinP1I GCGC 4 cut(s) 199, 212, 1086, 1265
HindIII AAGCTT 1 cut(s) 591
HinfI GANTC 5 cut(s) 164, 316, 633, 805, 1195
HpaII CCGG 5 cut(s) 115, 227, 251, 579, 1071
HphI GGTGA 4 cut(s) 413, 422, 470, 1322
Hpy166II GTNNAC 2 cut(s) 156, 683
Hpy188I TCNGA 4 cut(s) 163, 321, 1200, 1366
Hpy188III TCNNGA 2 cut(s) 503, 689
Hpy8I GTNNAC 2 cut(s) 156, 683
Hpy99I CGWCG 3 cut(s) 220, 223, 226
HpyAV CCTTC 4 cut(s) 253, 292, 1036, 1186
HpyCH4III ACNGT 3 cut(s) 272, 458, 862
HpyCH4V TGCA 7 cut(s) 349, 536, 728, 873, 940, 952, 1160
HpyF10VI GCNNNNNNNGC 9 cut(s) 76, 85, 109, 134, 143, 281, 647, 734, 875
HpyF3I CTNAG 8 cut(s) 99, 318, 342, 637, 784, 1044, 1199, 1274
Hsp92I GRCGYC 1 cut(s) 212
Hsp92II CATG 5 cut(s) 37, 43, 395, 499, 873
HspAI GCGC 4 cut(s) 199, 212, 1086, 1265
KasI GGCGCC 1 cut(s) 211
KroI GCCGGC 2 cut(s) 226, 578
KroNI GCCGGC 2 cut(s) 228, 580
Kzo9I GATC 7 cut(s) 517, 730, 835, 1137, 1316, 1348, 1369
LguI GCTCTTC 2 cut(s) 501, 974
LmnI GCTCC 7 cut(s) 57, 117, 196, 620, 904, 963, 1073
Lsp1109I GCAGC 5 cut(s) 61, 188, 333, 878, 1027
LweI GCATC 1 cut(s) 523
MaeI CTAG 4 cut(s) 336, 666, 1143, 1181
MaeIII GTNAC 4 cut(s) 286, 410, 891, 1132
MalI GATC 7 cut(s) 519, 732, 837, 1139, 1318, 1350, 1371
MbiI CCGCTC 3 cut(s) 26, 106, 620
MboI GATC 7 cut(s) 517, 730, 835, 1137, 1316, 1348, 1369
MboII GAAGA 4 cut(s) 394, 518, 991, 1021
MflI RGATCY 2 cut(s) 730, 835
MhlI GDGCHC 2 cut(s) 81, 858
MluCI AATT 3 cut(s) 29, 524, 998
Mly113I GGCGCC 1 cut(s) 212
MlyI GAGTC 3 cut(s) 158, 310, 799
MmeI TCCRAC 4 cut(s) 174, 186, 1039, 1344
MnlI CCTC 9 cut(s) 166, 353, 389, 401, 457, 466, 987, 1111, 1336
MroNI GCCGGC 2 cut(s) 226, 578
MroXI GAANNNNTTC 1 cut(s) 923
MslI CAYNNNNRTG 3 cut(s) 38, 396, 1248
MspA1I CMGCKG 2 cut(s) 1210, 1354
MspI CCGG 5 cut(s) 115, 227, 251, 579, 1071
MspR9I CCNGG 1 cut(s) 67
Mva1269I GAATGC 3 cut(s) 707, 726, 1283
MvaI CCWGG 1 cut(s) 67
MvnI CGCG 1 cut(s) 233
MwoI GCNNNNNNNGC 9 cut(s) 76, 85, 109, 134, 143, 281, 647, 734, 875
NaeI GCCGGC 2 cut(s) 228, 580
NarI GGCGCC 1 cut(s) 212
NdeI CATATG 1 cut(s) 913
NdeII GATC 7 cut(s) 517, 730, 835, 1137, 1316, 1348, 1369
NgoMIV GCCGGC 2 cut(s) 226, 578
NlaIII CATG 5 cut(s) 37, 43, 395, 499, 873
NlaIV GGNNCC 6 cut(s) 78, 79, 80, 213, 283, 1174
NmuCI GTSAC 3 cut(s) 286, 410, 891
NspI RCATGY 2 cut(s) 499, 873
PaeI GCATGC 1 cut(s) 873
PceI AGGCCT 1 cut(s) 137
PciSI GCTCTTC 2 cut(s) 501, 974
PcsI WCGNNNNNNNCGW 2 cut(s) 230, 420
PctI GAATGC 3 cut(s) 707, 726, 1283
PdiI GCCGGC 2 cut(s) 228, 580
PdmI GAANNNNTTC 1 cut(s) 923
PfeI GAWTC 2 cut(s) 633, 1195
PkrI GCNGC 7 cut(s) 51, 105, 203, 232, 348, 868, 1042
PleI GAGTC 3 cut(s) 158, 310, 799
PluTI GGCGCC 1 cut(s) 215
PpsI GAGTC 3 cut(s) 158, 310, 799
PsiI TTATAA 1 cut(s) 848
Psp6I CCWGG 1 cut(s) 65
PspGI CCWGG 1 cut(s) 65
PspN4I GGNNCC 6 cut(s) 78, 79, 80, 213, 283, 1174
PspOMI GGGCCC 1 cut(s) 77
PspPI GGNCC 3 cut(s) 77, 78, 248
PstNI CAGNNNCTG 1 cut(s) 734
PsuI RGATCY 2 cut(s) 730, 835
PvuII CAGCTG 1 cut(s) 1210
RsaI GTAC 1 cut(s) 269
RsaNI GTAC 1 cut(s) 268
RseI CAYNNNNRTG 3 cut(s) 38, 396, 1248
Rsr2I CGGWCCG 1 cut(s) 248
RsrII CGGWCCG 1 cut(s) 248
SapI GCTCTTC 2 cut(s) 501, 974
SatI GCNGC 7 cut(s) 50, 104, 202, 231, 347, 867, 1041
Sau3AI GATC 7 cut(s) 517, 730, 835, 1137, 1316, 1348, 1369
Sau96I GGNCC 3 cut(s) 77, 78, 248
SchI GAGTC 3 cut(s) 158, 310, 799
ScrFI CCNGG 1 cut(s) 67
SduI GDGCHC 2 cut(s) 81, 858
SfaNI GCATC 1 cut(s) 523
SfcI CTRYAG 1 cut(s) 83
SfoI GGCGCC 1 cut(s) 213
SinI GGWCC 1 cut(s) 248
SmiMI CAYNNNNRTG 3 cut(s) 38, 396, 1248
SmlI CTYRAG 2 cut(s) 107, 293
SmoI CTYRAG 2 cut(s) 107, 293
SphI GCATGC 1 cut(s) 873
Sse9I AATT 3 cut(s) 29, 524, 998
SseBI AGGCCT 1 cut(s) 137
SsiI CCGC 8 cut(s) 24, 74, 104, 118, 128, 231, 618, 1352
SspDI GGCGCC 1 cut(s) 211
SspI AATATT 1 cut(s) 1300
SspMI CTAG 4 cut(s) 336, 666, 1143, 1181
StuI AGGCCT 1 cut(s) 137
StyD4I CCNGG 1 cut(s) 65
StyI CCWWGG 2 cut(s) 1010, 1180
TaaI ACNGT 3 cut(s) 272, 458, 862
TaqI TCGA 1 cut(s) 1002
TaqII GACCGA 1 cut(s) 236
TasI AATT 3 cut(s) 29, 524, 998
TauI GCSGC 2 cut(s) 106, 233
TfiI GAWTC 2 cut(s) 633, 1195
TscAI CASTG 1 cut(s) 18
TseFI GTSAC 3 cut(s) 286, 410, 891
TseI GCWGC 5 cut(s) 49, 201, 346, 866, 1040
Tsp45I GTSAC 3 cut(s) 286, 410, 891
TspDTI ATGAA 9 cut(s) 22, 56, 272, 612, 661, 700, 900, 1010, 1253
TspGWI ACGGA 1 cut(s) 141
TspRI CASTG 1 cut(s) 18
VpaK11BI GGWCC 1 cut(s) 248
XapI RAATTY 2 cut(s) 524, 998
XceI RCATGY 2 cut(s) 499, 873
XmaJI CCTAGG 1 cut(s) 1180
XmiI GTMKAC 1 cut(s) 155
XmnI GAANNNNTTC 1 cut(s) 923
XspI CTAG 4 cut(s) 336, 666, 1143, 1181
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.