Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr09

Orthogroup ID

OG0013284

Physical Location & Seq

Genomic Coordinates Reverse (-)

1738122 .. 1741794

Gene Structure 3673 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD09G1028100.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1017 bp

ATGAAGACGTCGATGACAGAGCTCGACGACGAAACGGTGCGCAGCATGGCCATTGGCGCCGTTTTCTCGGACTTCGGTGGGAAGATAAATTCGCTTGATTTTCATCGAAAGGACGATTTACTAGTTACTGCTAGCGAGGATGATTCAGTTCGACTCTATGACATTGCAACTGCTAAGTTGATAAAGACTACATTTCATAAGAAACATGGTGCAGATCGTATATGCTTTACCCATCACCCAAGTTCTGTTATATGCTCTTCAAAATACAATCTGGATACCACTGGAGAATCACTGCGGTATCTGTCAATGTATGATAATCGATGCCTTCGCTACTTCAAAGGACATAAAGAGAGGATTGTCTCCCTCTGTATGTCTCCAGTGAATGATAGCTTCATGTCTGGTTCGTTGGACCACACCGTCAGAATATGGGATCTCCGTGTAAACGCCTGCCAAGGAATTTTACATATGCGTGGTAGGCCTACAGTTGCCTATGACCAGCAAGGTCTTGTTTTTGCCGTGGCAATGGAAGGGGGTGCGATCAAATTGTTTGACTCACGCTCCTATGACAAGGGTCCATTTGACACCTTTTTAGTTGGTGGAGATACTGCTGAAGTTTGTGATATCAAATTTAGCAACGATGGCAAATCAATGCTATTGACAACCACAAACAACAATATCTATGTTCTTGATGCATATGGAGGGGAGAAGCGTTGTGGGTACAGCGTGGAACCCTCTCCGAATGTAATTATCGAGGCAACTTTTACCCCAGATGGCCAGTATGTGGTGTCAGGCTCTGGAGACGGAAATTTGCACGCCTGGAGCATCAACAACCGAAATGAGGTGGCATGCTGGGACAGTCACATCGGAGTTCCGTCATGCTTGAAGTGGGCTCCTCGCAGAGCCATGTTTGCCGCTGCATCGAGCGTTCTCACGTTTTGGATACCTAATGAAGCAAACGAGCCTACTCACATGGAGACCGAAGCTGGTGCTGCCGATCCCGAGCATCCTTCTCAGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000151 GO:0003674 GO:0003682 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0006325 GO:0006464 GO:0006479 GO:0006807 GO:0006996 GO:0008150 GO:0008152 GO:0008213 GO:0009987 GO:0016043 GO:0016569 GO:0016570 GO:0016571 GO:0018022 GO:0018023 GO:0018193 GO:0018205 GO:0019538 GO:0031461 GO:0031974 GO:0031981 GO:0032259 GO:0032991 GO:0034708 GO:0034968 GO:0035097 GO:0036211 GO:0040034 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0043412 GO:0043414 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044451 GO:0044464 GO:0048188 GO:0048506 GO:0048509 GO:0048510 GO:0048580 GO:0048583 GO:0048586 GO:0050789 GO:0050793 GO:0051239 GO:0051276 GO:0051568 GO:0065007 GO:0070013 GO:0071704 GO:0071840 GO:0080008 GO:0080182 GO:1901564 GO:1902494 GO:1990234 GO:2000026 GO:2000028 GO:2000241

KEGG Pathways

Metabolic & Signaling

ko03015 map03015

Pfam Domains

Protein Families

ANAPC4_WD40 WD40

Protein Analysis

339

Amino Acids

37.41

Weight (kDa)

5.62

Isoelectric Point (pI)

44.94

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
WD40_Prp19	PF24814	20 - 220	1.7e-20	Prp19 WD40 domain
Beta-prop_THOC3	PF25174	25 - 90	1e-06	THOC3 beta-propeller domain
WD40_CDC20-Fz	PF24807	26 - 148	1.3e-11	CDC20/Fizzy WD40 domain
Beta-prop_WDR5	PF25175	28 - 308	2.5e-36	WDR5 beta-propeller domain
WDR55	PF24796	28 - 150	2.3e-06	WDR55
Beta-prop_WDR3_2nd	PF25172	29 - 309	2.2e-13	WDR3 second beta-propeller domain
Beta-prop_WDR75_1st	PF23869	86 - 145	2.7e-06	WD repeat-containing protein 75 first beta-propeller
WD40_WDHD1_1st	PF24817	97 - 230	2.9e-09	WDHD1 first WD40 domain
Beta-prop_WDR3_1st	PF25173	99 - 150	5.8e-07	WDR3 first beta-propeller domain
WD40	PF00400	107 - 144	3.3e-08	WD domain, G-beta repeat
Beta-prop_CAF1B_HIR1	PF24105	109 - 183	6.6e-06	CAF1B/HIR1 beta-propeller domain
Beta-prop_EML	PF23409	110 - 294	1.3e-07	Echinoderm microtubule-associated protein first beta-propeller
WD40_Gbeta	PF25391	111 - 273	2.4e-10	G protein beta WD-40 repeat protein
Beta-prop_THOC3	PF25174	111 - 308	1.4e-23	THOC3 beta-propeller domain
Beta-prop_WDR36-Utp21_2nd	PF25168	113 - 230	7.7e-06	WDR36/Utp21 second beta-propeller domain
Beta-prop_EML_2	PF23414	121 - 280	1.2e-17	Echinoderm microtubule-associated protein second beta-propeller
WD40_WDHD1_1st	PF24817	161 - 286	3e-09	WDHD1 first WD40 domain
WD40_CDC20-Fz	PF24807	162 - 301	1.2e-08	CDC20/Fizzy WD40 domain
Beta-prop_WDR3_1st	PF25173	162 - 305	2e-09	WDR3 first beta-propeller domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0013284)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G14530
fragaria_vesca	FvH4_6g51320 FvH4_6g51320
malus_domestica	MD09G1028100.v1.1
prunus_persica	Prupe.3G290600_v2.0.a1 Prupe.3G290600_v2.0.a1
pyrus_communis	pycom111g02200
rosa_chinensis	RchiOBHm_Chr2g0172941
rosa_laevigata	RLG00000022144
rosa_multiflora	Rmu_sc0029209.1_g000002 Rmu_sc0029210.1_g000001
rosa_roxburghii	Rroxscaffold_2G00079400
rosa_rugosa	Rorug02G0563800
rosa_samantha	Rh2AG640600 Rh2BG654000 Rh2CG619700 Rh2DG667700
rosa_wichuraiana	Rw2G052880

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	416
AatII	GACGTC	1 cut(s)	11
Acc16I	TGCGCA	1 cut(s)	41
AccB1I	GGYRCC	1 cut(s)	56
AccB7I	CCANNNNNTGG	1 cut(s)	781
AciI	CCGC	2 cut(s)	295, 912
AclWI	GGATC	2 cut(s)	438, 989
AcoI	YGGCCR	2 cut(s)	48, 772
AcsI	RAATTY	4 cut(s)	88, 456, 626, 805
AcuI	CTGAAG	1 cut(s)	630
AcyI	GRCGYC	2 cut(s)	8, 57
AfaI	GTAC	1 cut(s)	719
AfiI	CCNNNNNNNGG	2 cut(s)	781, 838
AgsI	TTSAA	3 cut(s)	261, 337, 883
AhlI	ACTAGT	1 cut(s)	121
AjnI	CCWGG	1 cut(s)	815
AluBI	AGCT	3 cut(s)	22, 390, 983
AluI	AGCT	3 cut(s)	22, 390, 983
Alw21I	GWGCWC	1 cut(s)	24
Alw26I	GTCTC	4 cut(s)	364, 378, 792, 968
AlwI	GGATC	2 cut(s)	438, 989
AlwNI	CAGNNNCTG	1 cut(s)	794
Ama87I	CYCGRG	1 cut(s)	998
AoxI	GGCC	3 cut(s)	48, 476, 772
ApeKI	GCWGC	3 cut(s)	42, 914, 989
ApoI	RAATTY	4 cut(s)	88, 456, 626, 805
AspLEI	GCGC	2 cut(s)	42, 59
AspS9I	GGNCC	2 cut(s)	409, 572
AsuHPI	GGTGA	1 cut(s)	227
AsuNHI	GCTAGC	1 cut(s)	131
AvaI	CYCGRG	1 cut(s)	998
AvaII	GGWCC	2 cut(s)	409, 572
BaeI	ACNNNNGTAYC	2 cut(s)	281, 314
BalI	TGGCCA	2 cut(s)	50, 774
BanI	GGYRCC	1 cut(s)	56
BanII	GRGCYC	2 cut(s)	24, 892
BbsI	GAAGAC	1 cut(s)	11
Bbv12I	GWGCWC	1 cut(s)	24
BbvI	GCAGC	3 cut(s)	54, 901, 976
BccI	CCATC	3 cut(s)	240, 632, 764
BceAI	ACGGC	2 cut(s)	44, 500
BcgI	CGANNNNNNTGC	2 cut(s)	968, 1002
BciT130I	CCWGG	1 cut(s)	817
BciVI	GTATCC	2 cut(s)	268, 933
BcoDI	GTCTC	4 cut(s)	364, 378, 792, 968
BcuI	ACTAGT	1 cut(s)	121
BfaI	CTAG	2 cut(s)	122, 132
BfmI	CTRYAG	1 cut(s)	480
BfoI	RGCGCY	1 cut(s)	60
BfuI	GTATCC	2 cut(s)	268, 933
BisI	GCNGC	4 cut(s)	43, 912, 915, 990
BlsI	GCNGC	4 cut(s)	44, 913, 916, 991
Bme1390I	CCNGG	1 cut(s)	817
Bme18I	GGWCC	2 cut(s)	409, 572
BmeT110I	CYCGRG	1 cut(s)	998
BmgT120I	GGNCC	2 cut(s)	409, 572
BmiI	GGNNCC	4 cut(s)	58, 573, 729, 891
BmrFI	CCNGG	1 cut(s)	817
BmsI	GCATC	5 cut(s)	311, 679, 831, 926, 1012
BmtI	GCTAGC	1 cut(s)	135
BoxI	GACNNNNGTC	1 cut(s)	570
BpiI	GAAGAC	1 cut(s)	11
BpmI	CTGGAG	4 cut(s)	303, 360, 816, 838
Bsa29I	ATCGAT	1 cut(s)	319
BsaBI	GATNNNNATC	1 cut(s)	102
BsaHI	GRCGYC	2 cut(s)	8, 57
BsaI	GGTCTC	1 cut(s)	968
BsaJI	CCNNGG	2 cut(s)	451, 516
BsaXI	ACNNNNNCTCC	2 cut(s)	542, 572
Bsc4I	CCNNNNNNNGG	2 cut(s)	781, 838
Bse1I	ACTGG	3 cut(s)	286, 377, 775
Bse3DI	GCAATG	2 cut(s)	162, 528
Bse8I	GATNNNNATC	1 cut(s)	102
BseBI	CCWGG	1 cut(s)	817
BseCI	ATCGAT	1 cut(s)	319
BseDI	CCNNGG	2 cut(s)	451, 516
BseGI	GGATG	2 cut(s)	145, 1003
BseJI	GATNNNNATC	1 cut(s)	102
BseLI	CCNNNNNNNGG	2 cut(s)	781, 838
BseMI	GCAATG	2 cut(s)	162, 528
BseNI	ACTGG	3 cut(s)	286, 377, 775
BseRI	GAGGAG	1 cut(s)	882
BseXI	GCAGC	3 cut(s)	54, 901, 976
BseYI	CCCAGC	1 cut(s)	849
BsgI	GTGCAG	1 cut(s)	231
BshFI	GGCC	3 cut(s)	50, 478, 774
BshNI	GGYRCC	1 cut(s)	56
BshVI	ATCGAT	1 cut(s)	319
BsiHKAI	GWGCWC	1 cut(s)	24
BsiHKCI	CYCGRG	1 cut(s)	998
BslFI	GGGAC	1 cut(s)	866
BslI	CCNNNNNNNGG	2 cut(s)	781, 838
BsmAI	GTCTC	4 cut(s)	364, 378, 792, 968
BsmBI	CGTCTC	1 cut(s)	792
BsmFI	GGGAC	1 cut(s)	866
BsnI	GGCC	3 cut(s)	50, 478, 774
Bso31I	GGTCTC	1 cut(s)	968
BsoBI	CYCGRG	1 cut(s)	998
Bsp1286I	GDGCHC	2 cut(s)	24, 892
Bsp143I	GATC	4 cut(s)	214, 430, 537, 994
BspACI	CCGC	2 cut(s)	295, 912
BspANI	GGCC	3 cut(s)	50, 478, 774
BspDI	ATCGAT	1 cut(s)	319
BspLI	GGNNCC	4 cut(s)	58, 573, 729, 891
BspOI	GCTAGC	1 cut(s)	135
BspPI	GGATC	2 cut(s)	438, 989
BspQI	GCTCTTC	1 cut(s)	262
BspT107I	GGYRCC	1 cut(s)	56
BspTNI	GGTCTC	1 cut(s)	968
BsrDI	GCAATG	2 cut(s)	162, 528
BsrI	ACTGG	3 cut(s)	286, 377, 775
BssECI	CCNNGG	2 cut(s)	451, 516
BssMI	GATC	4 cut(s)	214, 430, 537, 994
BssNI	GRCGYC	2 cut(s)	8, 57
BssT1I	CCWWGG	1 cut(s)	451
Bst2UI	CCWGG	1 cut(s)	817
Bst4CI	ACNGT	4 cut(s)	37, 418, 484, 857
Bst6I	CTCTTC	1 cut(s)	262
BstACI	GRCGYC	2 cut(s)	8, 57
BstC8I	GCNNGC	4 cut(s)	133, 448, 813, 847
BstDEI	CTNAG	2 cut(s)	174, 1011
BstDSI	CCRYGG	1 cut(s)	516
BstF5I	GGATG	2 cut(s)	145, 1003
BstH2I	RGCGCY	1 cut(s)	60
BstHHI	GCGC	2 cut(s)	42, 59
BstKTI	GATC	4 cut(s)	217, 433, 540, 997
BstMAI	GTCTC	4 cut(s)	364, 378, 792, 968
BstMBI	GATC	4 cut(s)	214, 430, 537, 994
BstMWI	GCNNNNNNNGC	5 cut(s)	56, 475, 639, 908, 989
BstNI	CCWGG	1 cut(s)	817
BstNSI	RCATGY	1 cut(s)	849
BstPAI	GACNNNNGTC	1 cut(s)	570
BstSCI	CCNGG	1 cut(s)	815
BstSFI	CTRYAG	1 cut(s)	480
BstV1I	GCAGC	3 cut(s)	54, 901, 976
BstV2I	GAAGAC	1 cut(s)	11
BstX2I	RGATCY	1 cut(s)	430
BstYI	RGATCY	1 cut(s)	430
Bsu15I	ATCGAT	1 cut(s)	319
BsuI	GTATCC	2 cut(s)	268, 933
BsuRI	GGCC	3 cut(s)	50, 478, 774
BsuTUI	ATCGAT	1 cut(s)	319
BtgI	CCRYGG	1 cut(s)	516
BtsCI	GGATG	2 cut(s)	145, 1003
BtsI	GCAGTG	1 cut(s)	290
BtsIMutI	CAGTG	3 cut(s)	279, 290, 384
Cac8I	GCNNGC	4 cut(s)	133, 448, 813, 847
CaiI	CAGNNNCTG	1 cut(s)	794
CfoI	GCGC	2 cut(s)	42, 59
Cfr13I	GGNCC	2 cut(s)	409, 572
ClaI	ATCGAT	1 cut(s)	319
Csp6I	GTAC	1 cut(s)	718
CviAII	CATG	7 cut(s)	46, 206, 394, 846, 876, 904, 970
CviQI	GTAC	1 cut(s)	718
DdeI	CTNAG	2 cut(s)	174, 1011
DinI	GGCGCC	1 cut(s)	58
DpnI	GATC	4 cut(s)	216, 432, 539, 996
DpnII	GATC	4 cut(s)	214, 430, 537, 994
DrdI	GACNNNNNNGTC	1 cut(s)	416
DseDI	GACNNNNNNGTC	1 cut(s)	416
EaeI	YGGCCR	2 cut(s)	48, 772
Eam1104I	CTCTTC	1 cut(s)	262
EarI	CTCTTC	1 cut(s)	262
Ecl136II	GAGCTC	1 cut(s)	22
Eco130I	CCWWGG	1 cut(s)	451
Eco147I	AGGCCT	1 cut(s)	478
Eco24I	GRGCYC	2 cut(s)	24, 892
Eco31I	GGTCTC	1 cut(s)	968
Eco32I	GATATC	1 cut(s)	622
Eco47I	GGWCC	2 cut(s)	409, 572
Eco53kI	GAGCTC	1 cut(s)	22
Eco57I	CTGAAG	1 cut(s)	630
Eco88I	CYCGRG	1 cut(s)	998
EcoICRI	GAGCTC	1 cut(s)	22
EcoRII	CCWGG	1 cut(s)	815
EcoRV	GATATC	1 cut(s)	622
EcoT14I	CCWWGG	1 cut(s)	451
EcoT22I	ATGCAT	1 cut(s)	694
EcoT38I	GRGCYC	2 cut(s)	24, 892
EgeI	GGCGCC	1 cut(s)	58
EheI	GGCGCC	1 cut(s)	58
ErhI	CCWWGG	1 cut(s)	451
Esp3I	CGTCTC	1 cut(s)	792
FaeI	CATG	7 cut(s)	49, 209, 397, 849, 879, 907, 973
FaqI	GGGAC	1 cut(s)	866
FatI	CATG	7 cut(s)	45, 205, 393, 845, 875, 903, 969
FauNDI	CATATG	2 cut(s)	465, 694
Fnu4HI	GCNGC	4 cut(s)	43, 912, 915, 990
FokI	GGATG	2 cut(s)	152, 990
FriOI	GRGCYC	2 cut(s)	24, 892
Fsp4HI	GCNGC	4 cut(s)	43, 912, 915, 990
FspBI	CTAG	2 cut(s)	122, 132
FspI	TGCGCA	1 cut(s)	41
GlaI	GCGC	2 cut(s)	41, 58
GluI	GCNGC	4 cut(s)	43, 912, 915, 990
GsaI	CCCAGC	1 cut(s)	853
GsuI	CTGGAG	4 cut(s)	303, 360, 816, 838
HaeII	RGCGCY	1 cut(s)	60
HaeIII	GGCC	3 cut(s)	50, 478, 774
HhaI	GCGC	2 cut(s)	42, 59
Hin1I	GRCGYC	2 cut(s)	8, 57
Hin1II	CATG	7 cut(s)	49, 209, 397, 849, 879, 907, 973
Hin6I	GCGC	2 cut(s)	40, 57
HinP1I	GCGC	2 cut(s)	40, 57
HinfI	GANTC	4 cut(s)	143, 153, 287, 551
HphI	GGTGA	1 cut(s)	227
Hpy166II	GTNNAC	1 cut(s)	442
Hpy188I	TCNGA	4 cut(s)	70, 422, 738, 866
Hpy188III	TCNNGA	4 cut(s)	272, 686, 795, 998
Hpy8I	GTNNAC	1 cut(s)	442
Hpy99I	CGWCG	3 cut(s)	13, 29, 32
HpyAV	CCTTC	3 cut(s)	335, 521, 1017
HpyCH4III	ACNGT	4 cut(s)	37, 418, 484, 857
HpyCH4IV	ACGT	2 cut(s)	8, 932
HpyCH4V	TGCA	5 cut(s)	167, 212, 692, 811, 917
HpyF10VI	GCNNNNNNNGC	5 cut(s)	56, 475, 639, 908, 989
HpyF3I	CTNAG	2 cut(s)	174, 1011
HpySE526I	ACGT	2 cut(s)	8, 932
Hsp92I	GRCGYC	2 cut(s)	8, 57
Hsp92II	CATG	7 cut(s)	49, 209, 397, 849, 879, 907, 973
HspAI	GCGC	2 cut(s)	40, 57
KasI	GGCGCC	1 cut(s)	56
Kzo9I	GATC	4 cut(s)	214, 430, 537, 994
LguI	GCTCTTC	1 cut(s)	262
LmnI	GCTCC	3 cut(s)	563, 819, 895
Lsp1109I	GCAGC	3 cut(s)	54, 901, 976
LweI	GCATC	5 cut(s)	311, 679, 831, 926, 1012
MaeI	CTAG	2 cut(s)	122, 132
MaeII	ACGT	2 cut(s)	8, 932
MaeIII	GTNAC	2 cut(s)	124, 857
MalI	GATC	4 cut(s)	216, 432, 539, 996
MboI	GATC	4 cut(s)	214, 430, 537, 994
MboII	GAAGA	3 cut(s)	16, 94, 249
MflI	RGATCY	1 cut(s)	430
MhlI	GDGCHC	2 cut(s)	24, 892
MlsI	TGGCCA	2 cut(s)	50, 774
MluCI	AATT	6 cut(s)	88, 456, 542, 626, 744, 805
MluNI	TGGCCA	2 cut(s)	50, 774
Mly113I	GGCGCC	1 cut(s)	57
MlyI	GAGTC	2 cut(s)	147, 545
MmeI	TCCRAC	1 cut(s)	387
MnlI	CCTC	8 cut(s)	130, 345, 374, 692, 742, 745, 832, 903
Mox20I	TGGCCA	2 cut(s)	50, 774
Mph1103I	ATGCAT	1 cut(s)	694
MscI	TGGCCA	2 cut(s)	50, 774
MslI	CAYNNNNRTG	1 cut(s)	468
Msp20I	TGGCCA	2 cut(s)	50, 774
MspA1I	CMGCKG	1 cut(s)	914
MspR9I	CCNGG	1 cut(s)	817
MvaI	CCWGG	1 cut(s)	817
MwoI	GCNNNNNNNGC	5 cut(s)	56, 475, 639, 908, 989
NarI	GGCGCC	1 cut(s)	57
NdeI	CATATG	2 cut(s)	465, 694
NdeII	GATC	4 cut(s)	214, 430, 537, 994
NheI	GCTAGC	1 cut(s)	131
NlaIII	CATG	7 cut(s)	49, 209, 397, 849, 879, 907, 973
NlaIV	GGNNCC	4 cut(s)	58, 573, 729, 891
NmuCI	GTSAC	1 cut(s)	857
NsbI	TGCGCA	1 cut(s)	41
NsiI	ATGCAT	1 cut(s)	694
NspI	RCATGY	1 cut(s)	849
PaeI	GCATGC	1 cut(s)	849
PceI	AGGCCT	1 cut(s)	478
PciSI	GCTCTTC	1 cut(s)	262
PfeI	GAWTC	2 cut(s)	143, 287
PflMI	CCANNNNNTGG	1 cut(s)	781
PkrI	GCNGC	4 cut(s)	44, 913, 916, 991
PleI	GAGTC	2 cut(s)	147, 545
PluTI	GGCGCC	1 cut(s)	60
PpsI	GAGTC	2 cut(s)	147, 545
PshAI	GACNNNNGTC	1 cut(s)	570
Psp124BI	GAGCTC	1 cut(s)	24
Psp6I	CCWGG	1 cut(s)	815
PspFI	CCCAGC	1 cut(s)	849
PspGI	CCWGG	1 cut(s)	815
PspN4I	GGNNCC	4 cut(s)	58, 573, 729, 891
PspPI	GGNCC	2 cut(s)	409, 572
PstNI	CAGNNNCTG	1 cut(s)	794
PsuI	RGATCY	1 cut(s)	430
RsaI	GTAC	1 cut(s)	719
RsaNI	GTAC	1 cut(s)	718
RseI	CAYNNNNRTG	1 cut(s)	468
SacI	GAGCTC	1 cut(s)	24
SapI	GCTCTTC	1 cut(s)	262
SatI	GCNGC	4 cut(s)	43, 912, 915, 990
Sau3AI	GATC	4 cut(s)	214, 430, 537, 994
Sau96I	GGNCC	2 cut(s)	409, 572
SchI	GAGTC	2 cut(s)	147, 545
ScrFI	CCNGG	1 cut(s)	817
SduI	GDGCHC	2 cut(s)	24, 892
SetI	ASST	9 cut(s)	11, 24, 392, 505, 587, 843, 935, 946, 985
SfaNI	GCATC	5 cut(s)	311, 679, 831, 926, 1012
SfcI	CTRYAG	1 cut(s)	480
SfoI	GGCGCC	1 cut(s)	58
SinI	GGWCC	2 cut(s)	409, 572
SmiMI	CAYNNNNRTG	1 cut(s)	468
SpeI	ACTAGT	1 cut(s)	121
SphI	GCATGC	1 cut(s)	849
Sse9I	AATT	6 cut(s)	88, 456, 542, 626, 744, 805
SseBI	AGGCCT	1 cut(s)	478
SsiI	CCGC	2 cut(s)	295, 912
SspDI	GGCGCC	1 cut(s)	56
SspMI	CTAG	2 cut(s)	122, 132
SstI	GAGCTC	1 cut(s)	24
StuI	AGGCCT	1 cut(s)	478
StyD4I	CCNGG	1 cut(s)	815
StyI	CCWWGG	1 cut(s)	451
TaaI	ACNGT	4 cut(s)	37, 418, 484, 857
TaiI	ACGT	2 cut(s)	11, 935
TaqI	TCGA	7 cut(s)	11, 24, 106, 151, 319, 750, 920
TaqII	GACCGA	1 cut(s)	992
TasI	AATT	6 cut(s)	88, 456, 542, 626, 744, 805
TauI	GCSGC	1 cut(s)	914
TfiI	GAWTC	2 cut(s)	143, 287
TscAI	CASTG	3 cut(s)	286, 297, 384
TseFI	GTSAC	1 cut(s)	857
TseI	GCWGC	3 cut(s)	42, 914, 989
Tsp45I	GTSAC	1 cut(s)	857
TspDTI	ATGAA	5 cut(s)	17, 92, 185, 382, 963
TspGWI	ACGGA	3 cut(s)	425, 816, 861
TspRI	CASTG	3 cut(s)	286, 297, 384
Van91I	CCANNNNNTGG	1 cut(s)	781
VpaK11BI	GGWCC	2 cut(s)	409, 572
XapI	RAATTY	4 cut(s)	88, 456, 626, 805
XceI	RCATGY	1 cut(s)	849
XspI	CTAG	2 cut(s)	122, 132
ZraI	GACGTC	1 cut(s)	9
Zsp2I	ATGCAT	1 cut(s)	694

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.