Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr09

Orthogroup ID

OG0015439

Physical Location & Seq

Genomic Coordinates Forward (+)

1753018 .. 1755305

Gene Structure 2288 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD09G1028300.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2028 bp

ATGAGTCGCGCTTCAACTCGTTCCGTGACTCGGAGCTGGGTTTTACCGACGAACTCCCGCCGTCACAGAAAACCATTTTCCCCCATTAATTTCTCACCAAAAATCTCAGCTTTCTCTTCTTCTTCTTCTTCGTCAGCACTGCAGACAATCCCAGACTCTCCCTCCAAATCAATCTCCAACCCACTTTACCATTTTCTCCCCCAAACCCAAAACCCCAACAACACAGTCAATCTCATCTGCTCCTCCTTCAAGCAAGGAAAGCCCCATCTTGCCCTCCTCCAAAACGACATCAAAGGGCTTCTTCCCCACCTGGGTGCGCGGGAAATTTCGAGGGTTTTACTCAGGTTTCAATCCGATCACTCCTCGGCTACTGCTTTTTTCAAGTGGGTCAAAAATGATTTGGGTCTCAGACCCACCACCCAGAATTACTGCATTGTTGTTCATATTCTTGCGTGCTGTAAAAAGTTCCCGAAAGCCATGAATTTGTTGAGGGAGTTGATAGTGTTGTTGGGCAGAGATGTTTCACCAAAAGATGACATTTTTCGGAGTTTGGTTTCGTGCACCGAAGATTGCAACTGGGATCCGGTTGTTTTCGATATGCTCATCAAGGCTTATGTGAAAGCAGGTATGATCAGAGATGGTTTAAGCACTTTTAGAAAGATTGTAGAGGTTGGTTTTGTTCCGAGTGTGGTTTCTTGTAATTGTCTTTTGAATGGGCTGGTGAAGTTGAATCGAATTGATCAGTGTTGGGATGTGTATGAGGAGATGGGAAGGATTGGGATACACCCAAATGTGTATACTTTTAATATTTTGATCAATGTTTTGTGTAAAGATGGAGATGTCGAGAAAGTGAATGCGTTTATGGAGAAGATGGAAGAAGAAGGATTTGATCCGGATATCGTGACGTATAACACGCTGATTAGTAGCTATTGTCGAAAAGGAAGGATGGAAGATGCATTTTATTTGTATAAGATCATGTATAGGAGAGGGGTGGTGCCGGATATGGTTTCGTACACTGCCTTGATGAATGGTCTTTGTAAGCAAGGGAAGGTAAGGGAGGCTCATCAGATTTTTCATCGGATGGTCGATAGAGGGTTGGATCAAGACGCAGTGACGTATAACACTCTTATTAGTGGTTATTGCCGCGAGGGGAAGATGCAAGAGTGCAGATTACTGTTGCACGAGATGATCAGAAAGGGAATTTGTCCAGATGATTTCACTTGTCGGGTAGTCGTAGAAGGATATGGCAAAGAAGGTAAACTGCTCTCTGCTCTGAATTTGGTCGTGGAGCTTCACAAATTTCAGATATCGATTTCTCGTGGTATTTACGATTATCTAATGGTTGCATTGTGTCGAGAAAATCATCCATTTGCAGCTAAAAGTCTACTAGAAAGAAGTTCCCAGGATGGTTATCTTCCTGGTTTGGATATCTATAACAAACTAATCGAGTCTCTCTGCGAAAGCCACTACGTGAAAGAGGCATTGCTTTTGAAAGCCGAGATGGTATGTAAGAACATTAAACCCGATCTTACAACATACAGAACTCTAATTTGCTCTCTCTGCCAAACAAACAGAACAGCAGAAGGTGAATCGCTAATGAAGGAGATGGCTGAATCCGGTTTGGCTCCTGATCTCGAAATATGCCGGGCGTTGATAAAGGGGTACTGCAACGAAAGAGATGTCGATAAAGCGGAAGCTTTGTTAGGGTTCTTTGCCAAAGGATTCCAAGTTTTTGACAGTGAAAGTTACAATGCACTTGTCCAAGTTTTGTGTGAGGACGGTGATATGGCTAAGTTGTTGGAGTTGCAGGAGAGGATGATGAAACTAGGGTTTGCGCCGAACAGCCTTACGTTTAAGCATGTGATCCATGGATTGTGGAAAACTGCAACGCCGGATAAAAAAAAACTTCGTGTGTTAGGTTTTCCGAACAGTCGGATATGCTCATACCATGCCAGGCCTTGCAAAATGTTCGTCAGAATGCGTGTCATGGCATGCCAAGCCTCGCTCGATGACATGTCGGCTACCTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003723 GO:0003824 GO:0004518 GO:0004519 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0006139 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009451 GO:0009987 GO:0016070 GO:0016787 GO:0016788 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044424 GO:0044464 GO:0046483 GO:0071704 GO:0090304 GO:0090305 GO:0097159 GO:1901360 GO:1901363

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

PPR PPR_1 PPR_2 PPR_3

Protein Analysis

676

Amino Acids

76.49

Weight (kDa)

8.73

Isoelectric Point (pI)

39.31

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PPR_2	PF13041	228 - 277	1.4e-17	PPR repeat family
PPR_long	PF17177	244 - 364	3.2e-11	Pentacotripeptide-repeat region of PRORP
PPR_3	PF13812	252 - 310	6.9e-12	Pentatricopeptide repeat domain
PPR_1	PF12854	260 - 292	2.3e-09	PPR repeat
PPR_2	PF13041	263 - 304	9.1e-12	PPR repeat family
PPR	PF01535	266 - 296	2.4e-06	PPR repeat
PPR_1	PF12854	295 - 326	9.4e-13	PPR repeat
PPR_2	PF13041	298 - 347	1.9e-20	PPR repeat family
PPR	PF01535	301 - 331	4.7e-09	PPR repeat
PPR_3	PF13812	326 - 380	1.5e-07	Pentatricopeptide repeat domain
PPR_1	PF12854	329 - 362	6.4e-11	PPR repeat
PPR_2	PF13041	333 - 374	1.5e-12	PPR repeat family
PPR	PF01535	336 - 366	1.1e-08	PPR repeat
PPR_1	PF12854	364 - 396	1.1e-09	PPR repeat
PPR_2	PF13041	369 - 416	2.1e-14	PPR repeat family
PPR	PF01535	371 - 401	1.2e-10	PPR repeat
PPR_2	PF13041	477 - 522	6.7e-11	PPR repeat family
PPR_1	PF12854	504 - 536	2.6e-06	PPR repeat
PPR_2	PF13041	580 - 625	1.4e-07	PPR repeat family

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Orthologous Genes (Group: OG0015439)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G40400 AT5G40400
fragaria_vesca	FvH4_5g31860
malus_domestica	MD09G1028300.v1.1
prunus_persica	Prupe.3G290200_v2.0.a1
pyrus_communis	pycom111g02230
rosa_chinensis	RchiOBHm_Chr2g0173011
rosa_laevigata	RLG00000022149
rosa_multiflora	Rmu_sc0012743.1_g000003
rosa_roxburghii	Rroxscaffold_2G00079320
rosa_samantha	Rh2AG641500 Rh2AG644000 Rh2BG654800 Rh2CG620200 Rh2DG668400
rosa_wichuraiana	Rw2G052920

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	614
AccB1I	GGYRCC	1 cut(s)	994
AccI	GTMKAC	2 cut(s)	797, 1384
AccII	CGCG	3 cut(s)	9, 319, 1146
AccIII	TCCGGA	1 cut(s)	892
AciI	CCGC	4 cut(s)	58, 319, 1144, 1691
AclWI	GGATC	5 cut(s)	575, 588, 884, 1107, 1858
AcsI	RAATTY	5 cut(s)	324, 481, 1200, 1276, 1298
AdeI	CACNNNGTG	1 cut(s)	1471
AfaI	GTAC	2 cut(s)	1013, 1664
AfiI	CCNNNNNNNGG	2 cut(s)	30, 311
AflIII	ACRYGT	1 cut(s)	2013
AgsI	TTSAA	7 cut(s)	15, 250, 350, 382, 712, 730, 1492
AjnI	CCWGG	4 cut(s)	309, 1401, 1417, 1952
AleI	CACNNNNGTG	1 cut(s)	312
AluBI	AGCT	6 cut(s)	36, 110, 927, 1291, 1376, 1697
AluI	AGCT	6 cut(s)	36, 110, 927, 1291, 1376, 1697
Alw21I	GWGCWC	1 cut(s)	563
Alw26I	GTCTC	2 cut(s)	410, 1455
Alw44I	GTGCAC	1 cut(s)	559
AlwI	GGATC	5 cut(s)	575, 588, 884, 1107, 1858
Aor13HI	TCCGGA	1 cut(s)	892
AoxI	GGCC	1 cut(s)	1955
ApaLI	GTGCAC	1 cut(s)	559
ApeKI	GCWGC	1 cut(s)	1373
ApoI	RAATTY	5 cut(s)	324, 481, 1200, 1276, 1298
ArsI	GACNNNNNNTTYG	4 cut(s)	1665, 1697, 1956, 1988
AseI	ATTAAT	1 cut(s)	87
AspLEI	GCGC	3 cut(s)	11, 319, 1837
AsuC2I	CCSGG	1 cut(s)	1646
AsuHPI	GGTGA	5 cut(s)	87, 516, 733, 1598, 1793
BaeGI	GKGCMC	1 cut(s)	563
BamHI	GGATCC	1 cut(s)	580
BanI	GGYRCC	1 cut(s)	994
BauI	CACGAG	2 cut(s)	1181, 1317
Bbv12I	GWGCWC	1 cut(s)	563
BbvI	GCAGC	1 cut(s)	1385
BceAI	ACGGC	1 cut(s)	45
BcgI	CGANNNNNNTGC	2 cut(s)	1951, 1985
BciT130I	CCWGG	4 cut(s)	311, 1403, 1419, 1954
BciVI	GTATCC	1 cut(s)	774
BclI	TGATCA	4 cut(s)	630, 739, 813, 1188
BcnI	CCSGG	1 cut(s)	1646
BcoDI	GTCTC	2 cut(s)	410, 1455
BfaI	CTAG	2 cut(s)	1388, 1826
BfmI	CTRYAG	1 cut(s)	140
BfuAI	ACCTGC	1 cut(s)	614
BfuI	GTATCC	1 cut(s)	774
BisI	GCNGC	2 cut(s)	1144, 1374
BlsI	GCNGC	2 cut(s)	1145, 1375
Bme1390I	CCNGG	5 cut(s)	311, 1403, 1419, 1646, 1954
BmiI	GGNNCC	3 cut(s)	582, 996, 1626
BmrFI	CCNGG	5 cut(s)	311, 1403, 1419, 1646, 1954
BmrI	ACTGGG	1 cut(s)	586
BmsI	GCATC	2 cut(s)	943, 1146
BmuI	ACTGGG	1 cut(s)	586
BpuMI	CCSGG	1 cut(s)	1646
Bsa29I	ATCGAT	1 cut(s)	1310
BsaAI	YACGTR	1 cut(s)	1471
BsaBI	GATNNNNATC	1 cut(s)	1410
BsaI	GGTCTC	1 cut(s)	410
BsaJI	CCNNGG	4 cut(s)	310, 363, 1401, 1867
BsaWI	WCCGGW	3 cut(s)	583, 892, 1616
BsaXI	ACNNNNNCTCC	2 cut(s)	146, 176
Bsc4I	CCNNNNNNNGG	2 cut(s)	30, 311
Bse1I	ACTGG	1 cut(s)	581
Bse3DI	GCAATG	1 cut(s)	1481
Bse8I	GATNNNNATC	1 cut(s)	1410
BseAI	TCCGGA	1 cut(s)	892
BseBI	CCWGG	4 cut(s)	311, 1403, 1419, 1954
BseCI	ATCGAT	1 cut(s)	1310
BseDI	CCNNGG	4 cut(s)	310, 363, 1401, 1867
BseGI	GGATG	6 cut(s)	757, 951, 1086, 1363, 1411, 1821
BseJI	GATNNNNATC	1 cut(s)	1410
BseLI	CCNNNNNNNGG	2 cut(s)	30, 311
BseMI	GCAATG	1 cut(s)	1481
BseMII	CTCAG	3 cut(s)	120, 355, 421
BseNI	ACTGG	1 cut(s)	581
BseRI	GAGGAG	4 cut(s)	232, 266, 352, 776
BseSI	GKGCMC	1 cut(s)	563
BseXI	GCAGC	1 cut(s)	1385
BseYI	CCCAGC	1 cut(s)	36
BsgI	GTGCAG	1 cut(s)	1186
Bsh1236I	CGCG	3 cut(s)	9, 319, 1146
BshFI	GGCC	1 cut(s)	1957
BshNI	GGYRCC	1 cut(s)	994
BshVI	ATCGAT	1 cut(s)	1310
BsiHKAI	GWGCWC	1 cut(s)	563
BsiSI	CCGG	6 cut(s)	584, 893, 998, 1617, 1645, 1892
BslI	CCNNNNNNNGG	2 cut(s)	30, 311
BsmAI	GTCTC	2 cut(s)	410, 1455
BsmI	GAATGC	2 cut(s)	859, 1983
BsnI	GGCC	1 cut(s)	1957
Bso31I	GGTCTC	1 cut(s)	410
Bsp1286I	GDGCHC	1 cut(s)	563
Bsp13I	TCCGGA	1 cut(s)	892
Bsp19I	CCATGG	1 cut(s)	1867
BspACI	CCGC	4 cut(s)	58, 319, 1144, 1691
BspANI	GGCC	1 cut(s)	1957
BspCNI	CTCAG	3 cut(s)	119, 354, 420
BspDI	ATCGAT	1 cut(s)	1310
BspEI	TCCGGA	1 cut(s)	892
BspFNI	CGCG	3 cut(s)	9, 319, 1146
BspLI	GGNNCC	3 cut(s)	582, 996, 1626
BspMAI	CTGCAG	1 cut(s)	144
BspMI	ACCTGC	1 cut(s)	614
BspPI	GGATC	5 cut(s)	575, 588, 884, 1107, 1858
BspT107I	GGYRCC	1 cut(s)	994
BspTNI	GGTCTC	1 cut(s)	410
BsrDI	GCAATG	1 cut(s)	1481
BsrI	ACTGG	1 cut(s)	581
BssECI	CCNNGG	4 cut(s)	310, 363, 1401, 1867
BssNAI	GTATAC	1 cut(s)	798
BssSI	CACGAG	2 cut(s)	1181, 1317
BssT1I	CCWWGG	1 cut(s)	1867
Bst1107I	GTATAC	1 cut(s)	798
Bst2BI	CACGAG	2 cut(s)	1181, 1317
Bst2UI	CCWGG	4 cut(s)	311, 1403, 1419, 1954
Bst4CI	ACNGT	5 cut(s)	226, 1176, 1739, 1781, 1931
Bst6I	CTCTTC	1 cut(s)	121
BstBAI	YACGTR	1 cut(s)	1471
BstC8I	GCNNGC	2 cut(s)	454, 1993
BstDEI	CTNAG	4 cut(s)	106, 341, 407, 1791
BstDSI	CCRYGG	1 cut(s)	1867
BstF5I	GGATG	6 cut(s)	757, 951, 1086, 1363, 1411, 1821
BstFNI	CGCG	3 cut(s)	9, 319, 1146
BstHHI	GCGC	3 cut(s)	11, 319, 1837
BstMAI	GTCTC	2 cut(s)	410, 1455
BstMWI	GCNNNNNNNGC	3 cut(s)	259, 1560, 1997
BstNI	CCWGG	4 cut(s)	311, 1403, 1419, 1954
BstNSI	RCATGY	3 cut(s)	1862, 1995, 2017
BstSCI	CCNGG	5 cut(s)	309, 1401, 1417, 1644, 1952
BstSFI	CTRYAG	1 cut(s)	140
BstSLI	GKGCMC	1 cut(s)	563
BstUI	CGCG	3 cut(s)	9, 319, 1146
BstV1I	GCAGC	1 cut(s)	1385
BstX2I	RGATCY	1 cut(s)	580
BstYI	RGATCY	1 cut(s)	580
BstZ17I	GTATAC	1 cut(s)	798
Bsu15I	ATCGAT	1 cut(s)	1310
BsuI	GTATCC	1 cut(s)	774
BsuRI	GGCC	1 cut(s)	1957
BsuTUI	ATCGAT	1 cut(s)	1310
BtgI	CCRYGG	1 cut(s)	1867
BtsCI	GGATG	6 cut(s)	757, 951, 1086, 1363, 1411, 1821
BtsI	GCAGTG	3 cut(s)	137, 1014, 1116
BtsIMutI	CAGTG	5 cut(s)	137, 749, 1014, 1116, 1744
BveI	ACCTGC	1 cut(s)	614
Cac8I	GCNNGC	2 cut(s)	454, 1993
CfoI	GCGC	3 cut(s)	11, 319, 1837
ClaI	ATCGAT	1 cut(s)	1310
CseI	GACGC	1 cut(s)	1115
Csp6I	GTAC	2 cut(s)	1012, 1663
CviAII	CATG	8 cut(s)	478, 976, 1859, 1868, 1949, 1987, 1992, 2014
CviQI	GTAC	2 cut(s)	1012, 1663
DdeI	CTNAG	4 cut(s)	106, 341, 407, 1791
DraIII	CACNNNGTG	1 cut(s)	1471
Eam1104I	CTCTTC	1 cut(s)	121
EarI	CTCTTC	1 cut(s)	121
Eco130I	CCWWGG	1 cut(s)	1867
Eco147I	AGGCCT	1 cut(s)	1957
Eco31I	GGTCTC	1 cut(s)	410
Eco32I	GATATC	3 cut(s)	898, 1308, 1429
EcoRII	CCWGG	4 cut(s)	309, 1401, 1417, 1952
EcoRV	GATATC	3 cut(s)	898, 1308, 1429
EcoT14I	CCWWGG	1 cut(s)	1867
EcoT22I	ATGCAT	1 cut(s)	958
ErhI	CCWWGG	1 cut(s)	1867
FaeI	CATG	8 cut(s)	481, 979, 1862, 1871, 1952, 1990, 1995, 2017
FalI	AAGNNNNNCTT	2 cut(s)	285, 317
FatI	CATG	8 cut(s)	477, 975, 1858, 1867, 1948, 1986, 1991, 2013
FauI	CCCGC	2 cut(s)	65, 312
FbaI	TGATCA	4 cut(s)	630, 739, 813, 1188
FblI	GTMKAC	2 cut(s)	797, 1384
Fnu4HI	GCNGC	2 cut(s)	1144, 1374
FokI	GGATG	6 cut(s)	764, 958, 1093, 1350, 1418, 1828
Fsp4HI	GCNGC	2 cut(s)	1144, 1374
FspBI	CTAG	2 cut(s)	1388, 1826
GlaI	GCGC	3 cut(s)	10, 318, 1836
GluI	GCNGC	2 cut(s)	1144, 1374
GsaI	CCCAGC	1 cut(s)	40
HaeIII	GGCC	1 cut(s)	1957
HapII	CCGG	6 cut(s)	584, 893, 998, 1617, 1645, 1892
HgaI	GACGC	1 cut(s)	1115
HhaI	GCGC	3 cut(s)	11, 319, 1837
Hin1II	CATG	8 cut(s)	481, 979, 1862, 1871, 1952, 1990, 1995, 2017
Hin6I	GCGC	3 cut(s)	9, 317, 1835
HinP1I	GCGC	3 cut(s)	9, 317, 1835
HindIII	AAGCTT	1 cut(s)	1695
HinfI	GANTC	8 cut(s)	4, 28, 155, 730, 1448, 1589, 1613, 1722
HpaII	CCGG	6 cut(s)	584, 893, 998, 1617, 1645, 1892
HphI	GGTGA	5 cut(s)	87, 516, 733, 1598, 1793
Hpy166II	GTNNAC	5 cut(s)	561, 798, 1014, 1259, 1385
Hpy188III	TCNNGA	9 cut(s)	469, 844, 893, 901, 1103, 1208, 1355, 1628, 1634
Hpy8I	GTNNAC	5 cut(s)	561, 798, 1014, 1259, 1385
Hpy99I	CGWCG	1 cut(s)	52
HpyAV	CCTTC	9 cut(s)	256, 765, 875, 936, 1042, 1232, 1247, 1577, 1594
HpyCH4III	ACNGT	5 cut(s)	226, 1176, 1739, 1781, 1931
HpyCH4IV	ACGT	4 cut(s)	905, 1115, 1470, 1850
HpyF10VI	GCNNNNNNNGC	3 cut(s)	259, 1560, 1997
HpyF3I	CTNAG	4 cut(s)	106, 341, 407, 1791
HpySE526I	ACGT	4 cut(s)	905, 1115, 1470, 1850
Hsp92II	CATG	8 cut(s)	481, 979, 1862, 1871, 1952, 1990, 1995, 2017
HspAI	GCGC	3 cut(s)	9, 317, 1835
Kpn2I	TCCGGA	1 cut(s)	892
Ksp22I	TGATCA	4 cut(s)	630, 739, 813, 1188
LmnI	GCTCC	4 cut(s)	33, 245, 1288, 1630
Lsp1109I	GCAGC	1 cut(s)	1385
LweI	GCATC	2 cut(s)	943, 1146
MaeI	CTAG	2 cut(s)	1388, 1826
MaeII	ACGT	4 cut(s)	905, 1115, 1470, 1850
MaeIII	GTNAC	5 cut(s)	25, 62, 901, 1111, 1745
MflI	RGATCY	1 cut(s)	580
MhlI	GDGCHC	1 cut(s)	563
MlyI	GAGTC	4 cut(s)	13, 22, 149, 1457
MmeI	TCCRAC	4 cut(s)	201, 1077, 1779, 1913
Mph1103I	ATGCAT	1 cut(s)	958
MroI	TCCGGA	1 cut(s)	892
MseI	TTAA	5 cut(s)	87, 644, 804, 1518, 1854
MslI	CAYNNNNRTG	2 cut(s)	312, 789
MspI	CCGG	6 cut(s)	584, 893, 998, 1617, 1645, 1892
MspR9I	CCNGG	5 cut(s)	311, 1403, 1419, 1646, 1954
Mva1269I	GAATGC	2 cut(s)	859, 1983
MvaI	CCWGG	4 cut(s)	311, 1403, 1419, 1954
MvnI	CGCG	3 cut(s)	9, 319, 1146
MwoI	GCNNNNNNNGC	3 cut(s)	259, 1560, 1997
NciI	CCSGG	1 cut(s)	1646
NcoI	CCATGG	1 cut(s)	1867
NlaIII	CATG	8 cut(s)	481, 979, 1862, 1871, 1952, 1990, 1995, 2017
NlaIV	GGNNCC	3 cut(s)	582, 996, 1626
NmeAIII	GCCGAG	2 cut(s)	344, 1522
NmuCI	GTSAC	4 cut(s)	25, 62, 901, 1111
NsiI	ATGCAT	1 cut(s)	958
NspI	RCATGY	3 cut(s)	1862, 1995, 2017
OliI	CACNNNNGTG	1 cut(s)	312
PaeI	GCATGC	1 cut(s)	1995
PceI	AGGCCT	1 cut(s)	1957
PciI	ACATGT	1 cut(s)	2013
PctI	GAATGC	2 cut(s)	859, 1983
PfeI	GAWTC	4 cut(s)	730, 1589, 1613, 1722
PkrI	GCNGC	2 cut(s)	1145, 1375
PleI	GAGTC	4 cut(s)	12, 22, 149, 1456
PpsI	GAGTC	4 cut(s)	12, 22, 149, 1456
Ppu21I	YACGTR	1 cut(s)	1471
PscI	ACATGT	1 cut(s)	2013
PshBI	ATTAAT	1 cut(s)	87
Psp6I	CCWGG	4 cut(s)	309, 1401, 1417, 1952
PspFI	CCCAGC	1 cut(s)	36
PspGI	CCWGG	4 cut(s)	309, 1401, 1417, 1952
PspN4I	GGNNCC	3 cut(s)	582, 996, 1626
PstI	CTGCAG	1 cut(s)	144
PsuI	RGATCY	1 cut(s)	580
RsaI	GTAC	2 cut(s)	1013, 1664
RsaNI	GTAC	2 cut(s)	1012, 1663
RseI	CAYNNNNRTG	2 cut(s)	312, 789
SaqAI	TTAA	5 cut(s)	87, 644, 804, 1518, 1854
SatI	GCNGC	2 cut(s)	1144, 1374
SchI	GAGTC	4 cut(s)	13, 22, 149, 1457
ScrFI	CCNGG	5 cut(s)	311, 1403, 1419, 1646, 1954
SduI	GDGCHC	1 cut(s)	563
SfaNI	GCATC	2 cut(s)	943, 1146
SfcI	CTRYAG	1 cut(s)	140
SmiMI	CAYNNNNRTG	2 cut(s)	312, 789
SphI	GCATGC	1 cut(s)	1995
SseBI	AGGCCT	1 cut(s)	1957
SsiI	CCGC	4 cut(s)	58, 319, 1144, 1691
SspI	AATATT	1 cut(s)	808
SspMI	CTAG	2 cut(s)	1388, 1826
StuI	AGGCCT	1 cut(s)	1957
StyD4I	CCNGG	5 cut(s)	309, 1401, 1417, 1644, 1952
StyI	CCWWGG	1 cut(s)	1867
TaaI	ACNGT	5 cut(s)	226, 1176, 1739, 1781, 1931
TaiI	ACGT	4 cut(s)	908, 1118, 1473, 1853
TauI	GCSGC	1 cut(s)	1146
TfiI	GAWTC	4 cut(s)	730, 1589, 1613, 1722
Tru1I	TTAA	5 cut(s)	87, 644, 804, 1518, 1854
Tru9I	TTAA	5 cut(s)	87, 644, 804, 1518, 1854
TscAI	CASTG	5 cut(s)	144, 749, 1021, 1116, 1744
TseFI	GTSAC	4 cut(s)	25, 62, 901, 1111
TseI	GCWGC	1 cut(s)	1373
Tsp45I	GTSAC	4 cut(s)	25, 62, 901, 1111
TspDTI	ATGAA	6 cut(s)	431, 494, 1040, 1064, 1613, 1835
TspGWI	ACGGA	1 cut(s)	13
TspRI	CASTG	5 cut(s)	144, 749, 1021, 1116, 1744
VneI	GTGCAC	1 cut(s)	559
VspI	ATTAAT	1 cut(s)	87
XapI	RAATTY	5 cut(s)	324, 481, 1200, 1276, 1298
XceI	RCATGY	3 cut(s)	1862, 1995, 2017
XmiI	GTMKAC	2 cut(s)	797, 1384
XspI	CTAG	2 cut(s)	1388, 1826
Zsp2I	ATGCAT	1 cut(s)	958

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.