Pentatricopeptide repeat-containing protein
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT5G40400 AT5G40400 |
| fragaria_vesca | FvH4_5g31860 |
| malus_domestica | MD09G1028300.v1.1 |
| prunus_persica | Prupe.3G290200_v2.0.a1 |
| pyrus_communis | pycom111g02230 |
| rosa_chinensis | RchiOBHm_Chr2g0173011 |
| rosa_laevigata | RLG00000022149 |
| rosa_multiflora | Rmu_sc0012743.1_g000003 |
| rosa_roxburghii | Rroxscaffold_2G00079320 |
| rosa_samantha | Rh2AG641500 Rh2AG644000 Rh2BG654800 Rh2CG620200 Rh2DG668400 |
| rosa_wichuraiana | Rw2G052920 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AciI | CCGC | 1 cut(s) | 398 |
| AcoI | YGGCCR | 1 cut(s) | 137 |
| AcsI | RAATTY | 3 cut(s) | 49, 494, 537 |
| AgsI | TTSAA | 7 cut(s) | 68, 77, 265, 386, 500, 574, 628 |
| AluBI | AGCT | 3 cut(s) | 64, 149, 317 |
| AluI | AGCT | 3 cut(s) | 64, 149, 317 |
| AoxI | GGCC | 1 cut(s) | 137 |
| ApeKI | GCWGC | 1 cut(s) | 146 |
| ApoI | RAATTY | 3 cut(s) | 49, 494, 537 |
| AsuHPI | GGTGA | 2 cut(s) | 371, 566 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 48, 80 |
| BbvI | GCAGC | 1 cut(s) | 158 |
| BccI | CCATC | 5 cut(s) | 173, 211, 268, 373, 644 |
| BceAI | ACGGC | 1 cut(s) | 124 |
| BisI | GCNGC | 2 cut(s) | 147, 398 |
| BlsI | GCNGC | 2 cut(s) | 148, 399 |
| Bpu10I | CCTNAGC | 1 cut(s) | 255 |
| BpuEI | CTTGAG | 1 cut(s) | 159 |
| BsaJI | CCNNGG | 1 cut(s) | 640 |
| BseDI | CCNNGG | 1 cut(s) | 640 |
| BseGI | GGATG | 2 cut(s) | 457, 636 |
| BseMII | CTCAG | 1 cut(s) | 240 |
| BseX3I | CGGCCG | 1 cut(s) | 137 |
| BseXI | GCAGC | 1 cut(s) | 158 |
| BsgI | GTGCAG | 1 cut(s) | 27 |
| Bsh1285I | CGRYCG | 1 cut(s) | 140 |
| BshFI | GGCC | 1 cut(s) | 139 |
| BsiEI | CGRYCG | 1 cut(s) | 140 |
| BslFI | GGGAC | 1 cut(s) | 208 |
| BsmFI | GGGAC | 1 cut(s) | 208 |
| BsnI | GGCC | 1 cut(s) | 139 |
| Bsp19I | CCATGG | 1 cut(s) | 640 |
| BspACI | CCGC | 1 cut(s) | 398 |
| BspANI | GGCC | 1 cut(s) | 139 |
| BspCNI | CTCAG | 1 cut(s) | 241 |
| BssECI | CCNNGG | 1 cut(s) | 640 |
| BssT1I | CCWWGG | 1 cut(s) | 640 |
| Bst4CI | ACNGT | 1 cut(s) | 352 |
| BstDEI | CTNAG | 3 cut(s) | 249, 255, 564 |
| BstDSI | CCRYGG | 1 cut(s) | 640 |
| BstF5I | GGATG | 2 cut(s) | 457, 636 |
| BstMCI | CGRYCG | 1 cut(s) | 140 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 27 |
| BstV1I | GCAGC | 1 cut(s) | 158 |
| BstZI | CGGCCG | 1 cut(s) | 137 |
| BsuRI | GGCC | 1 cut(s) | 139 |
| BtgI | CCRYGG | 1 cut(s) | 640 |
| BtsCI | GGATG | 2 cut(s) | 457, 636 |
| BtsIMutI | CAGTG | 2 cut(s) | 44, 357 |
| CviAII | CATG | 2 cut(s) | 551, 641 |
| CviJI | RGCY | 8 cut(s) | 64, 139, 149, 254, 269, 317, 563, 618 |
| CviKI_1 | RGCY | 8 cut(s) | 64, 139, 149, 254, 269, 317, 563, 618 |
| DdeI | CTNAG | 3 cut(s) | 249, 255, 564 |
| EaeI | YGGCCR | 1 cut(s) | 137 |
| EagI | CGGCCG | 1 cut(s) | 137 |
| EclXI | CGGCCG | 1 cut(s) | 137 |
| Eco130I | CCWWGG | 1 cut(s) | 640 |
| Eco32I | GATATC | 1 cut(s) | 202 |
| Eco52I | CGGCCG | 1 cut(s) | 137 |
| EcoRV | GATATC | 1 cut(s) | 202 |
| EcoT14I | CCWWGG | 1 cut(s) | 640 |
| ErhI | CCWWGG | 1 cut(s) | 640 |
| FaeI | CATG | 2 cut(s) | 554, 644 |
| FalI | AAGNNNNNCTT | 1 cut(s) | 663 |
| FaqI | GGGAC | 1 cut(s) | 208 |
| FatI | CATG | 2 cut(s) | 550, 640 |
| Fnu4HI | GCNGC | 2 cut(s) | 147, 398 |
| FokI | GGATG | 2 cut(s) | 464, 623 |
| Fsp4HI | GCNGC | 2 cut(s) | 147, 398 |
| GluI | GCNGC | 2 cut(s) | 147, 398 |
| HaeIII | GGCC | 1 cut(s) | 139 |
| Hin1II | CATG | 2 cut(s) | 554, 644 |
| HinfI | GANTC | 6 cut(s) | 221, 362, 386, 404, 467, 509 |
| HphI | GGTGA | 2 cut(s) | 371, 566 |
| Hpy188I | TCNGA | 2 cut(s) | 409, 514 |
| Hpy188III | TCNNGA | 3 cut(s) | 128, 176, 686 |
| HpyAV | CCTTC | 3 cut(s) | 5, 20, 350 |
| HpyCH4III | ACNGT | 1 cut(s) | 352 |
| HpyCH4V | TGCA | 5 cut(s) | 44, 119, 146, 441, 608 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 27 |
| HpyF3I | CTNAG | 3 cut(s) | 249, 255, 564 |
| Hsp92II | CATG | 2 cut(s) | 554, 644 |
| LmnI | GCTCC | 1 cut(s) | 61 |
| LpnPI | CCDG | 9 cut(s) | 75, 204, 245, 375, 403, 414, 671, 673, 678 |
| Lsp1109I | GCAGC | 1 cut(s) | 158 |
| MaeIII | GTNAC | 7 cut(s) | 4, 92, 244, 366, 434, 518, 576 |
| MboII | GAAGA | 2 cut(s) | 671, 674 |
| MluCI | AATT | 4 cut(s) | 49, 212, 494, 537 |
| MlyI | GAGTC | 2 cut(s) | 230, 371 |
| MnlI | CCTC | 2 cut(s) | 236, 244 |
| MseI | TTAA | 1 cut(s) | 476 |
| MslI | CAYNNNNRTG | 1 cut(s) | 99 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 27 |
| NcoI | CCATGG | 1 cut(s) | 640 |
| NlaIII | CATG | 2 cut(s) | 554, 644 |
| NmeAIII | GCCGAG | 1 cut(s) | 295 |
| NmuCI | GTSAC | 3 cut(s) | 4, 92, 244 |
| PfeI | GAWTC | 4 cut(s) | 386, 404, 467, 509 |
| PkrI | GCNGC | 2 cut(s) | 148, 399 |
| PleI | GAGTC | 2 cut(s) | 229, 370 |
| PpsI | GAGTC | 2 cut(s) | 229, 370 |
| RseI | CAYNNNNRTG | 1 cut(s) | 99 |
| SaqAI | TTAA | 1 cut(s) | 476 |
| SatI | GCNGC | 2 cut(s) | 147, 398 |
| SchI | GAGTC | 2 cut(s) | 230, 371 |
| SetI | ASST | 7 cut(s) | 66, 151, 261, 319, 361, 422, 482 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 99 |
| SmlI | CTYRAG | 1 cut(s) | 174 |
| SmoI | CTYRAG | 1 cut(s) | 174 |
| Sse9I | AATT | 4 cut(s) | 49, 212, 494, 537 |
| SsiI | CCGC | 1 cut(s) | 398 |
| SspI | AATATT | 1 cut(s) | 414 |
| StyI | CCWWGG | 1 cut(s) | 640 |
| TaaI | ACNGT | 1 cut(s) | 352 |
| TasI | AATT | 4 cut(s) | 49, 212, 494, 537 |
| TauI | GCSGC | 1 cut(s) | 400 |
| TfiI | GAWTC | 4 cut(s) | 386, 404, 467, 509 |
| Tru1I | TTAA | 1 cut(s) | 476 |
| Tru9I | TTAA | 1 cut(s) | 476 |
| TscAI | CASTG | 2 cut(s) | 51, 357 |
| TseFI | GTSAC | 3 cut(s) | 4, 92, 244 |
| TseI | GCWGC | 1 cut(s) | 146 |
| Tsp45I | GTSAC | 3 cut(s) | 4, 92, 244 |
| TspDTI | ATGAA | 2 cut(s) | 540, 608 |
| TspRI | CASTG | 2 cut(s) | 51, 357 |
| XapI | RAATTY | 3 cut(s) | 49, 494, 537 |