Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr09

Orthogroup ID

OG0010732

Physical Location & Seq

Genomic Coordinates Reverse (-)

3615917 .. 3620025

Gene Structure 4109 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD09G1054400.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2352 bp

ATGAAGTTCGGAAAAGAGTTCGTTTCGCAAATGGTGCCGGAATGGCGAGAAGCATACATGGACTACAACTCTCTCAAGCTTATCATAAAAGACATCCTGCGTTTCCGGAAGAAATATGCATCATCAACACCAATGGCCACGACGCCGGCAGGGTCGGTACTAAAGCGGAGGGTGTCACTCTACAGAGCATTCAGTGGGCTGACAAGCCGACAACGCGGCTCGCTGAGGAAGATGGAGGACGAGGAGATACTTGTGGCTGAAGAAGGGGAGGAAGGGCAGTGGCAGACAAGGTTCTTGATGCCGTCCGAGGACGGAGGAGAGTTTGAGGAGGTGTTTTTTAGGAGCCTGGACGATGAGTTTAACAAAGTGAATTGCTTTTACAAGAAGAAAGTTGGGGAAGTTGTGGAGGAGGCTGAGGAGTTGAGTAGGCAGATGGATGGTTTGATCGCTCTTAGGTTAAAGGTTGATAATCCAAAGGTGGATATTGGAGGAGGAAGTGAATTGGCAAGCAATGGGATTTCTTCAGTCTCATTTGTTCATCCAAGTGGTAGAAAAACAGGGAAAGATATGGATGTAATTCAAGAAGTTGAGATGAGCAATGAAGGAGAAATATTGGAAGAAGATGAAGAGAGGGGAATCGAGGAATTGGAAACCGCTGACCGGAAACCCAACAGAGGCACGGTGGATATTAAGGGGTTTAAACCACAACCACTAGAGGTTTTGAATCATATAAAGATCAACGTGGTGCCTGAAACTCCTGTATCAACAATCAAAAGCATATTCCAGCCGAATACGAAACCCGACTTATCATTCAGCAAGAAAGAGCTGAAGAAAGTAGAAGAGCAAATGACACAGGCTTTTAGCGAGTTCTACAAAAAGCTCCGGCTTTTGAAAAGCTACTGTTTCCTTAATCAATTGGCCTTCTCGAAGATCATGAAGAAATATGACAAGTTCTCTTCAAGGCCTGCATCGAAGGCTTACTTGAATATGGTGGATAATTCTTATCTCGGTAGCAGCGATGAAGTTACTAGGCTTATGGAAAGGGTGGAGAGTACCTTCATAAAGCACTTCGCAAATGGAAATCGAAGAAAAGGAATGAAGACATTAAGACCGAAAACCAAAAGGGAAAAGCATAGAAATACATTTTTCTTGGGGCTGCTCTTCGGGGGCTCGATTGCACTTGCAGTAGCCATCATTGTGCTTATGCATGCAAGAAATATCCTTAAGAGCAACGGGCATGATCTGTACATGGAAAACATATTTCCGCTGTACAGTTTGTTTGGATTCATTGTCCTACATCTGATCATGTTCTCAGGGAACATATTCTTTTGGAGGCGCTATCGTGTAAATTATCCATTTATCTTTGGCTTCAACCAAGGGTCAGAGATTGGTTACAGACAGCTATTCCTTATCAGTTCAGGACTTGCAATTCTCGCATTGGCTGGTACCATCTCAAATTTGGATATGGAGTTGGATCCGAGAACAAAAAGCTACGTAGCCGTGAAAGAATTGGTCCCCCTGGGCCTAGTCATTGTTGTGCTTCTTATAATGGTTTGTCCTTTCAACATTATATATCGTTCCAGTCGATATTTCCTCCTCCTGTGCATATTCCGTTGTCTTCTTGCTCCTCTTTATAAGGTTACCCTCCCGGATTTTTTCTTGGCAGATCAGCTTACTAGCCAGGTTCAAGCCTTCAGGAGTTTGGAATTCTACGTTTGCTATTACGGTTGGGGGGACTTCAAAAAAAGATCACACAACTGCCTTGACAGCCACGTTTTTAAATCTTTCTACTTCATTGTAGCAATTATTCCTTATTGGATGCGTTCGCTTCAGTGTGTGCGACGCTTGATAGAGGAGAAAGACAGAATGCAAGGGTTAAATGCGCTGAAATACTTCTCAACAATCGTTGCAGTAGCCATGAGAACAAGTTTTGATATGAAAGCAGGGATGACATGGAAAATCCTCGCTATAGTTAGTTCAGTTGTGGCAACTGTTTTCGGTACATACTGGGACATTGTCATTGATTGGGGTCTTCTGCAACGAAATTCTAAGAACCCTTGGCTGAGAGATAAACTCCTCGTATCAAACCACAATGTTTATTTTGTTGCCATGGGGTTGAATGTTCTACTGAGACTCGCTTGGATGCAGTCAGTATTAGGAATTAGAGGAGCACCTTTCGTCCATAGAACAGCCTTGATCACGATAGTTGCCTGTTTAGAGATCATCCGTCGTGGCATTTGGAATTTCTTTCGGTTGGAGAATGAGCACTTGAACAACGTCGGAAAGTATCGGGCGTTCAAGTCTGTACCCCTACCCTTCAACTACGACCGTGATCACACCAGGAGCGGATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005794 GO:0005802 GO:0005886 GO:0008150 GO:0012505 GO:0016020 GO:0031984 GO:0042592 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044422 GO:0044424 GO:0044431 GO:0044444 GO:0044446 GO:0044464 GO:0048878 GO:0050801 GO:0055062 GO:0055065 GO:0055069 GO:0055076 GO:0055080 GO:0055081 GO:0055083 GO:0065007 GO:0065008 GO:0071944 GO:0072505 GO:0072506 GO:0072507 GO:0098771 GO:0098791

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

EXS SPX

Protein Analysis

784

Amino Acids

90.32

Weight (kDa)

9.39

Isoelectric Point (pI)

41.8

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
SPX	PF03105	1 - 331	1.8e-68	SPX domain
EXS	PF03124	420 - 757	1.5e-98	EXS family

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0010732)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G29060 AT4G25350
fragaria_vesca	FvH4_6g48060 FvH4_6g48060
malus_domestica	MD09G1054400.v1.1 MD17G1052300.v1.1
prunus_persica	Prupe.3G264100_v2.0.a1
pyrus_communis	pycom111g04570
rosa_chinensis	RchiOBHm_Chr2g0167381
rosa_laevigata	RLG00000021712 RLG00000021728
rosa_multiflora	Rmu_sc0001840.1_g000006
rosa_roxburghii	Rroxscaffold_2G00083560
rosa_rugosa	Rorug02G0529900.1 Rorug02G0530000
rosa_samantha	Rh2AG596800 Rh2BG608300 Rh2CG579100 Rh2DG619600
rosa_wichuraiana	Rw2G049680

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	2 cut(s)	1547, 1635
Acc65I	GGTACC	1 cut(s)	1445
AccB1I	GGYRCC	3 cut(s)	34, 745, 1445
AccBSI	CCGCTC	1 cut(s)	2346
AccII	CGCG	1 cut(s)	216
AccIII	TCCGGA	1 cut(s)	105
AciI	CCGC	5 cut(s)	166, 216, 654, 1265, 2346
AclWI	GGATC	2 cut(s)	1469, 1482
AcoI	YGGCCR	1 cut(s)	135
AcsI	RAATTY	4 cut(s)	1456, 1706, 2044, 2242
AcuI	CTGAAG	5 cut(s)	279, 507, 848, 1678, 1814
AcyI	GRCGYC	1 cut(s)	143
AfaI	GTAC	7 cut(s)	159, 1054, 1247, 1271, 1447, 2002, 2307
AfiI	CCNNNNNNNGG	2 cut(s)	660, 674
AflII	CTTAAG	1 cut(s)	1223
AjnI	CCWGG	4 cut(s)	345, 1518, 1680, 2339
AluBI	AGCT	7 cut(s)	79, 826, 880, 897, 1402, 1491, 1672
AluI	AGCT	7 cut(s)	79, 826, 880, 897, 1402, 1491, 1672
Alw21I	GWGCWC	2 cut(s)	2173, 2268
Alw26I	GTCTC	2 cut(s)	532, 2125
AlwI	GGATC	2 cut(s)	1469, 1482
Aor13HI	TCCGGA	1 cut(s)	105
AoxI	GGCC	4 cut(s)	135, 918, 962, 1522
ApeKI	GCWGC	2 cut(s)	1014, 1156
ApoI	RAATTY	4 cut(s)	1456, 1706, 2044, 2242
Asp700I	GAANNNNTTC	2 cut(s)	1322, 1892
Asp718I	GGTACC	1 cut(s)	1445
AspLEI	GCGC	2 cut(s)	1338, 1885
AspS9I	GGNCC	2 cut(s)	1513, 1522
AsuC2I	CCSGG	1 cut(s)	1649
AvaII	GGWCC	1 cut(s)	1513
BaeI	ACNNNNGTAYC	2 cut(s)	744, 777
BalI	TGGCCA	1 cut(s)	137
BamHI	GGATCC	1 cut(s)	1474
BanI	GGYRCC	3 cut(s)	34, 745, 1445
BanII	GRGCYC	1 cut(s)	1172
BbsI	GAAGAC	3 cut(s)	1106, 1610, 2024
Bbv12I	GWGCWC	2 cut(s)	2173, 2268
BbvCI	CCTCAGC	2 cut(s)	224, 414
BbvI	GCAGC	2 cut(s)	1026, 1143
BccI	CCATC	5 cut(s)	226, 427, 431, 1199, 1457
BceAI	ACGGC	2 cut(s)	286, 1484
BciT130I	CCWGG	4 cut(s)	347, 1520, 1682, 2341
BclI	TGATCA	3 cut(s)	1302, 2196, 2332
BcnI	CCSGG	1 cut(s)	1649
BcoDI	GTCTC	2 cut(s)	532, 2125
BfaI	CTAG	4 cut(s)	713, 1029, 1526, 1677
BfmI	CTRYAG	2 cut(s)	181, 1968
BfoI	RGCGCY	1 cut(s)	1339
BfrI	CTTAAG	1 cut(s)	1223
BglI	GCCNNNNNGGC	1 cut(s)	43
BisI	GCNGC	3 cut(s)	217, 1015, 1157
BlsI	GCNGC	3 cut(s)	218, 1016, 1158
Bme1390I	CCNGG	5 cut(s)	347, 1520, 1649, 1682, 2341
Bme18I	GGWCC	1 cut(s)	1513
BmgT120I	GGNCC	2 cut(s)	1513, 1522
BmiI	GGNNCC	6 cut(s)	36, 344, 747, 1447, 1476, 1515
BmrFI	CCNGG	5 cut(s)	347, 1520, 1649, 1682, 2341
BmrI	ACTGGG	1 cut(s)	2017
BmsI	GCATC	5 cut(s)	128, 288, 977, 1809, 2133
BmuI	ACTGGG	1 cut(s)	2017
BpiI	GAAGAC	3 cut(s)	1106, 1610, 2024
BplI	GAGNNNNNCTC	2 cut(s)	2058, 2090
Bpu10I	CCTNAGC	2 cut(s)	224, 414
BpuEI	CTTGAG	1 cut(s)	59
BpuMI	CCSGG	1 cut(s)	1649
BsaAI	YACGTR	1 cut(s)	1495
BsaHI	GRCGYC	1 cut(s)	143
BsaJI	CCNNGG	6 cut(s)	306, 1375, 1518, 1519, 2057, 2109
BsaWI	WCCGGW	2 cut(s)	105, 660
Bsc4I	CCNNNNNNNGG	2 cut(s)	660, 674
Bse118I	RCCGGY	1 cut(s)	145
Bse1I	ACTGG	2 cut(s)	1581, 2012
Bse3DI	GCAATG	2 cut(s)	517, 604
BseAI	TCCGGA	1 cut(s)	105
BseBI	CCWGG	4 cut(s)	347, 1520, 1682, 2341
BseDI	CCNNGG	6 cut(s)	306, 1375, 1518, 1519, 2057, 2109
BseGI	GGATG	8 cut(s)	93, 442, 538, 577, 1824, 1953, 2148, 2223
BseLI	CCNNNNNNNGG	2 cut(s)	660, 674
BseMI	GCAATG	2 cut(s)	517, 604
BseMII	CTCAG	5 cut(s)	215, 405, 1326, 2054, 2120
BseNI	ACTGG	2 cut(s)	1581, 2012
BseXI	GCAGC	2 cut(s)	1026, 1143
Bsh1236I	CGCG	1 cut(s)	216
Bsh1285I	CGRYCG	1 cut(s)	2329
BshFI	GGCC	4 cut(s)	137, 920, 964, 1524
BshNI	GGYRCC	3 cut(s)	34, 745, 1445
BsiEI	CGRYCG	1 cut(s)	2329
BsiHKAI	GWGCWC	2 cut(s)	2173, 2268
BsiSI	CCGG	6 cut(s)	38, 106, 146, 661, 883, 1649
BslFI	GGGAC	3 cut(s)	1499, 1748, 2024
BslI	CCNNNNNNNGG	2 cut(s)	660, 674
BsmAI	GTCTC	2 cut(s)	532, 2125
BsmFI	GGGAC	3 cut(s)	1499, 1748, 2024
BsmI	GAATGC	2 cut(s)	188, 1872
BsnI	GGCC	4 cut(s)	137, 920, 964, 1524
Bsp1286I	GDGCHC	3 cut(s)	1172, 2173, 2268
Bsp13I	TCCGGA	1 cut(s)	105
Bsp1407I	TGTACA	2 cut(s)	1245, 1269
Bsp19I	CCATGG	1 cut(s)	2109
BspACI	CCGC	5 cut(s)	166, 216, 654, 1265, 2346
BspANI	GGCC	4 cut(s)	137, 920, 964, 1524
BspCNI	CTCAG	5 cut(s)	216, 406, 1325, 2055, 2121
BspEI	TCCGGA	1 cut(s)	105
BspFNI	CGCG	1 cut(s)	216
BspHI	TCATGA	1 cut(s)	933
BspLI	GGNNCC	6 cut(s)	36, 344, 747, 1447, 1476, 1515
BspPI	GGATC	2 cut(s)	1469, 1482
BspQI	GCTCTTC	2 cut(s)	834, 1166
BspT107I	GGYRCC	3 cut(s)	34, 745, 1445
BspTI	CTTAAG	1 cut(s)	1223
BsrBI	CCGCTC	1 cut(s)	2346
BsrDI	GCAATG	2 cut(s)	517, 604
BsrFI	RCCGGY	1 cut(s)	145
BsrGI	TGTACA	2 cut(s)	1245, 1269
BsrI	ACTGG	2 cut(s)	1581, 2012
BssAI	RCCGGY	1 cut(s)	145
BssECI	CCNNGG	6 cut(s)	306, 1375, 1518, 1519, 2057, 2109
BssNI	GRCGYC	1 cut(s)	143
BssT1I	CCWWGG	3 cut(s)	1375, 2057, 2109
Bst2UI	CCWGG	4 cut(s)	347, 1520, 1682, 2341
Bst4CI	ACNGT	6 cut(s)	682, 902, 1274, 1727, 1993, 2330
Bst6I	CTCTTC	4 cut(s)	621, 834, 961, 1166
BstACI	GRCGYC	1 cut(s)	143
BstAFI	CTTAAG	1 cut(s)	1223
BstAPI	GCANNNNNTGC	1 cut(s)	34
BstAUI	TGTACA	2 cut(s)	1245, 1269
BstBAI	YACGTR	1 cut(s)	1495
BstC8I	GCNNGC	5 cut(s)	147, 221, 508, 966, 1209
BstDEI	CTNAG	7 cut(s)	224, 414, 452, 1312, 2049, 2063, 2129
BstDSI	CCRYGG	1 cut(s)	2109
BstEII	GGTNACC	1 cut(s)	1639
BstF5I	GGATG	8 cut(s)	93, 442, 538, 577, 1824, 1953, 2148, 2223
BstFNI	CGCG	1 cut(s)	216
BstH2I	RGCGCY	1 cut(s)	1339
BstHHI	GCGC	2 cut(s)	1338, 1885
BstMAI	GTCTC	2 cut(s)	532, 2125
BstMCI	CGRYCG	1 cut(s)	2329
BstMWI	GCNNNNNNNGC	6 cut(s)	34, 43, 213, 974, 1433, 1767
BstNI	CCWGG	4 cut(s)	347, 1520, 1682, 2341
BstNSI	RCATGY	1 cut(s)	1211
BstPI	GGTNACC	1 cut(s)	1639
BstSCI	CCNGG	5 cut(s)	345, 1518, 1647, 1680, 2339
BstSFI	CTRYAG	2 cut(s)	181, 1968
BstSNI	TACGTA	1 cut(s)	1495
BstUI	CGCG	1 cut(s)	216
BstV1I	GCAGC	2 cut(s)	1026, 1143
BstV2I	GAAGAC	3 cut(s)	1106, 1610, 2024
BstX2I	RGATCY	1 cut(s)	1474
BstYI	RGATCY	1 cut(s)	1474
BsuRI	GGCC	4 cut(s)	137, 920, 964, 1524
BtgI	CCRYGG	1 cut(s)	2109
BtgZI	GCGATG	1 cut(s)	1032
BtsCI	GGATG	8 cut(s)	93, 442, 538, 577, 1824, 1953, 2148, 2223
BtsI	GCAGTG	1 cut(s)	284
BtsIMutI	CAGTG	3 cut(s)	199, 284, 1838
Cac8I	GCNNGC	5 cut(s)	147, 221, 508, 966, 1209
CciI	TCATGA	1 cut(s)	933
CfoI	GCGC	2 cut(s)	1338, 1885
Cfr10I	RCCGGY	1 cut(s)	145
Cfr13I	GGNCC	2 cut(s)	1513, 1522
CseI	GACGC	2 cut(s)	151, 1851
Csp6I	GTAC	7 cut(s)	158, 1053, 1246, 1270, 1446, 2001, 2306
CviAII	CATG	9 cut(s)	58, 934, 1208, 1238, 1249, 1306, 1918, 1953, 2110
CviQI	GTAC	7 cut(s)	158, 1053, 1246, 1270, 1446, 2001, 2306
DdeI	CTNAG	7 cut(s)	224, 414, 452, 1312, 2049, 2063, 2129
DraI	TTTAAA	2 cut(s)	700, 1780
EaeI	YGGCCR	1 cut(s)	135
Eam1104I	CTCTTC	4 cut(s)	621, 834, 961, 1166
EarI	CTCTTC	4 cut(s)	621, 834, 961, 1166
Eco105I	TACGTA	1 cut(s)	1495
Eco130I	CCWWGG	3 cut(s)	1375, 2057, 2109
Eco147I	AGGCCT	1 cut(s)	964
Eco24I	GRGCYC	1 cut(s)	1172
Eco47I	GGWCC	1 cut(s)	1513
Eco57I	CTGAAG	5 cut(s)	279, 507, 848, 1678, 1814
Eco91I	GGTNACC	1 cut(s)	1639
EcoO65I	GGTNACC	1 cut(s)	1639
EcoRI	GAATTC	1 cut(s)	1706
EcoRII	CCWGG	4 cut(s)	345, 1518, 1680, 2339
EcoT14I	CCWWGG	3 cut(s)	1375, 2057, 2109
EcoT22I	ATGCAT	2 cut(s)	121, 1209
EcoT38I	GRGCYC	1 cut(s)	1172
ErhI	CCWWGG	3 cut(s)	1375, 2057, 2109
FaeI	CATG	9 cut(s)	61, 937, 1211, 1241, 1252, 1309, 1921, 1956, 2113
FalI	AAGNNNNNCTT	2 cut(s)	965, 997
FaqI	GGGAC	3 cut(s)	1499, 1748, 2024
FatI	CATG	9 cut(s)	57, 933, 1207, 1237, 1248, 1305, 1917, 1952, 2109
FbaI	TGATCA	3 cut(s)	1302, 2196, 2332
Fnu4HI	GCNGC	3 cut(s)	217, 1015, 1157
FokI	GGATG	8 cut(s)	80, 449, 525, 584, 1831, 1960, 2155, 2210
FriOI	GRGCYC	1 cut(s)	1172
Fsp4HI	GCNGC	3 cut(s)	217, 1015, 1157
FspBI	CTAG	4 cut(s)	713, 1029, 1526, 1677
GlaI	GCGC	2 cut(s)	1337, 1884
GluI	GCNGC	3 cut(s)	217, 1015, 1157
HaeII	RGCGCY	1 cut(s)	1339
HaeIII	GGCC	4 cut(s)	137, 920, 964, 1524
HapII	CCGG	6 cut(s)	38, 106, 146, 661, 883, 1649
HgaI	GACGC	2 cut(s)	151, 1851
HhaI	GCGC	2 cut(s)	1338, 1885
Hin1I	GRCGYC	1 cut(s)	143
Hin1II	CATG	9 cut(s)	61, 937, 1211, 1241, 1252, 1309, 1921, 1956, 2113
Hin6I	GCGC	2 cut(s)	1336, 1883
HinP1I	GCGC	2 cut(s)	1336, 1883
HindIII	AAGCTT	1 cut(s)	77
HinfI	GANTC	4 cut(s)	636, 724, 1284, 2133
HpaII	CCGG	6 cut(s)	38, 106, 146, 661, 883, 1649
Hpy188I	TCNGA	6 cut(s)	11, 307, 1302, 1384, 1479, 2282
Hpy188III	TCNNGA	8 cut(s)	106, 295, 581, 925, 934, 1419, 1696, 2200
Hpy99I	CGWCG	4 cut(s)	145, 1845, 2232, 2282
HpyAV	CCTTC	8 cut(s)	257, 266, 596, 931, 967, 1066, 1702, 2326
HpyCH4III	ACNGT	6 cut(s)	682, 902, 1274, 1727, 1993, 2330
HpyCH4IV	ACGT	5 cut(s)	741, 1494, 1713, 1773, 2277
HpyF10VI	GCNNNNNNNGC	6 cut(s)	34, 43, 213, 974, 1433, 1767
HpyF3I	CTNAG	7 cut(s)	224, 414, 452, 1312, 2049, 2063, 2129
HpySE526I	ACGT	5 cut(s)	741, 1494, 1713, 1773, 2277
Hsp92I	GRCGYC	1 cut(s)	143
Hsp92II	CATG	9 cut(s)	61, 937, 1211, 1241, 1252, 1309, 1921, 1956, 2113
HspAI	GCGC	2 cut(s)	1336, 1883
Kpn2I	TCCGGA	1 cut(s)	105
KpnI	GGTACC	1 cut(s)	1449
KroI	GCCGGC	1 cut(s)	145
KroNI	GCCGGC	1 cut(s)	147
Ksp22I	TGATCA	3 cut(s)	1302, 2196, 2332
LguI	GCTCTTC	2 cut(s)	834, 1166
LmnI	GCTCC	5 cut(s)	342, 885, 1630, 2168, 2343
Lsp1109I	GCAGC	2 cut(s)	1026, 1143
LweI	GCATC	5 cut(s)	128, 288, 977, 1809, 2133
MaeI	CTAG	4 cut(s)	713, 1029, 1526, 1677
MaeII	ACGT	5 cut(s)	741, 1494, 1713, 1773, 2277
MaeIII	GTNAC	4 cut(s)	174, 1024, 1391, 1639
MbiI	CCGCTC	1 cut(s)	2346
MfeI	CAATTG	1 cut(s)	914
MflI	RGATCY	1 cut(s)	1474
MhlI	GDGCHC	3 cut(s)	1172, 2173, 2268
MlsI	TGGCCA	1 cut(s)	137
MluNI	TGGCCA	1 cut(s)	137
MlyI	GAGTC	1 cut(s)	2127
MmeI	TCCRAC	3 cut(s)	1452, 2235, 2260
Mox20I	TGGCCA	1 cut(s)	137
Mph1103I	ATGCAT	2 cut(s)	121, 1209
MroI	TCCGGA	1 cut(s)	105
MroNI	GCCGGC	1 cut(s)	145
MroXI	GAANNNNTTC	2 cut(s)	1322, 1892
MscI	TGGCCA	1 cut(s)	137
MseI	TTAA	9 cut(s)	360, 458, 690, 699, 909, 1106, 1224, 1779, 1877
MslI	CAYNNNNRTG	3 cut(s)	543, 1196, 1535
Msp20I	TGGCCA	1 cut(s)	137
MspA1I	CMGCKG	2 cut(s)	656, 1267
MspCI	CTTAAG	1 cut(s)	1223
MspI	CCGG	6 cut(s)	38, 106, 146, 661, 883, 1649
MspR9I	CCNGG	5 cut(s)	347, 1520, 1649, 1682, 2341
MssI	GTTTAAAC	1 cut(s)	700
MunI	CAATTG	1 cut(s)	914
Mva1269I	GAATGC	2 cut(s)	188, 1872
MvaI	CCWGG	4 cut(s)	347, 1520, 1682, 2341
MvnI	CGCG	1 cut(s)	216
MwoI	GCNNNNNNNGC	6 cut(s)	34, 43, 213, 974, 1433, 1767
NaeI	GCCGGC	1 cut(s)	147
NciI	CCSGG	1 cut(s)	1649
NcoI	CCATGG	1 cut(s)	2109
NgoMIV	GCCGGC	1 cut(s)	145
NlaIII	CATG	9 cut(s)	61, 937, 1211, 1241, 1252, 1309, 1921, 1956, 2113
NlaIV	GGNNCC	6 cut(s)	36, 344, 747, 1447, 1476, 1515
NmuCI	GTSAC	1 cut(s)	174
NsiI	ATGCAT	2 cut(s)	121, 1209
NspI	RCATGY	1 cut(s)	1211
PaeI	GCATGC	1 cut(s)	1211
PagI	TCATGA	1 cut(s)	933
PasI	CCCWGGG	1 cut(s)	1519
PceI	AGGCCT	1 cut(s)	964
PciSI	GCTCTTC	2 cut(s)	834, 1166
PcsI	WCGNNNNNNNCGW	2 cut(s)	1014, 1582
PctI	GAATGC	2 cut(s)	188, 1872
PdiI	GCCGGC	1 cut(s)	147
PdmI	GAANNNNTTC	2 cut(s)	1322, 1892
PfeI	GAWTC	3 cut(s)	636, 724, 1284
PflFI	GACNNNGTC	1 cut(s)	2015
PfoI	TCCNGGA	1 cut(s)	1647
PkrI	GCNGC	3 cut(s)	218, 1016, 1158
PleI	GAGTC	1 cut(s)	2127
PmeI	GTTTAAAC	1 cut(s)	700
PpsI	GAGTC	1 cut(s)	2127
Ppu21I	YACGTR	1 cut(s)	1495
PsiI	TTATAA	2 cut(s)	1547, 1635
Psp6I	CCWGG	4 cut(s)	345, 1518, 1680, 2339
PspEI	GGTNACC	1 cut(s)	1639
PspGI	CCWGG	4 cut(s)	345, 1518, 1680, 2339
PspN4I	GGNNCC	6 cut(s)	36, 344, 747, 1447, 1476, 1515
PspPI	GGNCC	2 cut(s)	1513, 1522
PsrI	GAACNNNNNNTAC	2 cut(s)	2279, 2311
PsuI	RGATCY	1 cut(s)	1474
PsyI	GACNNNGTC	1 cut(s)	2015
RsaI	GTAC	7 cut(s)	159, 1054, 1247, 1271, 1447, 2002, 2307
RsaNI	GTAC	7 cut(s)	158, 1053, 1246, 1270, 1446, 2001, 2306
RseI	CAYNNNNRTG	3 cut(s)	543, 1196, 1535
SapI	GCTCTTC	2 cut(s)	834, 1166
SaqAI	TTAA	9 cut(s)	360, 458, 690, 699, 909, 1106, 1224, 1779, 1877
SatI	GCNGC	3 cut(s)	217, 1015, 1157
Sau96I	GGNCC	2 cut(s)	1513, 1522
SchI	GAGTC	1 cut(s)	2127
ScrFI	CCNGG	5 cut(s)	347, 1520, 1649, 1682, 2341
SduI	GDGCHC	3 cut(s)	1172, 2173, 2268
SfaNI	GCATC	5 cut(s)	128, 288, 977, 1809, 2133
SfcI	CTRYAG	2 cut(s)	181, 1968
SinI	GGWCC	1 cut(s)	1513
SmiMI	CAYNNNNRTG	3 cut(s)	543, 1196, 1535
SmlI	CTYRAG	2 cut(s)	74, 1223
SmoI	CTYRAG	2 cut(s)	74, 1223
SnaBI	TACGTA	1 cut(s)	1495
SphI	GCATGC	1 cut(s)	1211
SseBI	AGGCCT	1 cut(s)	964
SsiI	CCGC	5 cut(s)	166, 216, 654, 1265, 2346
SspI	AATATT	1 cut(s)	612
SspMI	CTAG	4 cut(s)	713, 1029, 1526, 1677
StuI	AGGCCT	1 cut(s)	964
StyD4I	CCNGG	5 cut(s)	345, 1518, 1647, 1680, 2339
StyI	CCWWGG	3 cut(s)	1375, 2057, 2109
TaaI	ACNGT	6 cut(s)	682, 902, 1274, 1727, 1993, 2330
TaiI	ACGT	5 cut(s)	744, 1497, 1716, 1776, 2280
TaqI	TCGA	6 cut(s)	639, 926, 971, 1084, 1172, 1585
TaqII	GACCGA	1 cut(s)	1126
TatI	WGTACW	2 cut(s)	1245, 1269
TauI	GCSGC	1 cut(s)	219
TfiI	GAWTC	3 cut(s)	636, 724, 1284
Tru1I	TTAA	9 cut(s)	360, 458, 690, 699, 909, 1106, 1224, 1779, 1877
Tru9I	TTAA	9 cut(s)	360, 458, 690, 699, 909, 1106, 1224, 1779, 1877
TscAI	CASTG	3 cut(s)	199, 284, 1838
TseFI	GTSAC	1 cut(s)	174
TseI	GCWGC	2 cut(s)	1014, 1156
Tsp45I	GTSAC	1 cut(s)	174
TspGWI	ACGGA	3 cut(s)	327, 1601, 2216
TspRI	CASTG	3 cut(s)	199, 284, 1838
Tth111I	GACNNNGTC	1 cut(s)	2015
Vha464I	CTTAAG	1 cut(s)	1223
VpaK11BI	GGWCC	1 cut(s)	1513
XapI	RAATTY	4 cut(s)	1456, 1706, 2044, 2242
XceI	RCATGY	1 cut(s)	1211
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1456
XmnI	GAANNNNTTC	2 cut(s)	1322, 1892
XspI	CTAG	4 cut(s)	713, 1029, 1526, 1677
Zsp2I	ATGCAT	2 cut(s)	121, 1209

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.