Basic Information

Type: gene

Biological Identity

Species

rosa_laevigata

Chromosome

Chr4

Orthogroup ID

OG0010732

Physical Location & Seq

Genomic Coordinates Reverse (-)

77565114 .. 77572593

Gene Structure 7480 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

RLM00000021728

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2487 bp

ATGTCTGCATCCTCCGGTATAGGGAGAGGAACATATTCCTCGGCCGCCTCGCTTGCTCCGACCACATTGGAATGGCCGGAAGCCTGCTCGGCCGCTTCTGATCCGGATGTTGCAGAGTCTCCGCTCTCAGAGATGAGCGGCCATTGGGATATGTGTCTAGATCCTATCGCACGCCTAGTCCCTTTATTCCACCGCGAGCTAAGCCTGCCAAACTCTCTGATCCCCACGTGGTCAAGGAATATCATGATTACCTCAACGCAGTCTCCTGATCGTGGGCTCTTGTTGGACCTTCGCGGGAGTGTCCAACTGGCTTTCCGCGGGACTGAAGGCCAGACCTTTGGTTTGGGCCGCTTAATTCGGCCCATGGTGCTTGTCCTTCCTGGACCCTGCCCAAAGATACTTTTGGGCTCAAACAAGTTCAATGGCTTGTATTTGTTCACATCAAATTTCAGGTTGAGACGTTTTGTTTCTGGGAGATTGAAGAAGATGAAGTTTGGGAAGGAGTTTGTGTCCCAAATGGTGCCGGAATGGCAAGAAGCGTACTTGGACTACAACTCACTCAAGGGACTCTCGAGGGCAAAAGCGGATGAAGAAGTTCTTGTCAGTGTAGATGGGGAGGATGGGAGGTACCAGACGTTTGTGACGGTCTCGGATGAGGAAAGAGTGTATGAGTTCAATAAAGTGGTTAGGTTCTACAAGAAGAAAGTTAAAGAAGTGATGGAAGAGGCAGATGAGTTGAGTAGACAGATGGATGCTTTGATTGCTCTGAGGCTCAAGATAATCCTATGGTGGATTTTGGGGATGGTCCAAATTCAGCTAAATTTCAATTGTGGGTTTGGTTCTGAAGGAGGGCAGCACATGGATGTGATTGAGGAAGTTGAGATGATGGAAGATGAAGAGAAAGGAGAGAATGAACCAAAAACTAGAACCCAGAAAGCCAATGGAGGTATTGAGGGCTTTAAACCTTCTCAATTAGAGATTTTGGAACATGTAAAGATCAATGTTACACCAGAAACTCCGGTCTCAACTCTGAAAGGGATCGTCCTCAACAGTGAAAAACAAGAGTTCTTCTTGAACCAATTGGCTTTCTCAAAGATCATGAAGAAACATGACAAGATCACTTCAAGGAATGCATCAAAGGTTCACTTGAACATGATGGAAACCTCTTATCTCGGGACCTGTGATGATGTTACTAGGCTTTTAGAAAGGGTGGTGGCTACCTTCATAAAACACTTCACAAATGGAAATCACAGAAAAGGAATGAAGACATTAAGACCAACAGCCAGAAGGGAAAAGCATAGAAGTACATTTTTCTTGGGACTGTTCTCTGGGTGTTCAATTGCACTTGTAGCGGCCATTATAGTGCTTATACATGCAAGAGGTCTCCTTGAAAATGAGGGGCGTAGCCTGTACATGGAAAACATATTTCCTCTTTACAGCTTGTTTGGATTCATAGTCCTTCATATGGTCGTCTTCTCAGCAAATATATATATCTGGAGGCGATACCGAGTAAATTATTCATTTATCTTTGGCTTTAAAAAAGGCACAGAACTGGGGTACAGACAGTCTTTCCTCATGAGTTCCGGCCTTGCAGTTCTGGCATTGGCTGGTGTCCTCTCAAATTTGGATATGGAGATGGACCCAAGTACACAAAGCTTCAGAGCCTTGACAGAATTAGTCCCTTTGGGTCTAGTCATTGTTCTGCTTGGTATGTTATGTCCTTTCAACATAGTATATCGTTCCACCCGATTTTTCCTCATCCAAGCTGTAGTACATTGCGTTTGTGCTCCTCTGTACAAGGTTACCCTCTCGGATTTTTTCTTGGCAGATCAGCTTACTAGCCAGGCCTTCAGGAGTTTGGAATTCTATGTCTGCTATTATGGTTGGGGGGACTTCAAAAAGAGATCACACAACTGCCTAGACAGCCATGTATACAAAACTTTCTACTTCATTGTAGCAATTATCCCATATTGGATTCGTTCCCTTCAGTGTCTGCGACGCTTGGTGGAGGAGAACGATGGAATGCAAGGGTTAAATGGGCTGAAATACTTCTCAACAATTGTCGCAGTTGCCATGAGGACAAGTTTTGATATGAAAAAAGGGATGACATGGAAGATCCTAGCTATGACTAGCTCAATTGTTGCAACAGTTGTCATAGATTGGGGTCTTCTGAGACGGAATTCTGAAAACCGTTGGCTCAGAGACAAACTCCTTATGCCAAACAAAAGTGTTTATTTCGTAGCCATGGTGTTAAATGTTCTACTGAGACTTGCTTGGATGCAGTCAGTACTAGGATTTCGAGAAGCACCATTCATCCATAGAACAGCCTTAGTTGCAATAGTTGCCTGTTTAGAAATAATTCGCCGTGGCATTTGGAACTTCTTCCGGTTGGAGAATGAGCACTTGAATAATGTTGGGAGGTACCGAGCATTCAAGTCTGTACCCCTACCTTTCAACTATTACCATGATGAAGGCAAGAGCATATAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005794 GO:0005802 GO:0005886 GO:0008150 GO:0012505 GO:0016020 GO:0031984 GO:0042592 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044422 GO:0044424 GO:0044431 GO:0044444 GO:0044446 GO:0044464 GO:0048878 GO:0050801 GO:0055062 GO:0055065 GO:0055069 GO:0055076 GO:0055080 GO:0055081 GO:0055083 GO:0065007 GO:0065008 GO:0071944 GO:0072505 GO:0072506 GO:0072507 GO:0098771 GO:0098791

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

EXS SPX

Protein Analysis

829

Amino Acids

94.52

Weight (kDa)

9.17

Isoelectric Point (pI)

40.42

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
SPX	PF03105	163 - 188	8.6e-11	SPX domain
SPX	PF03105	224 - 354	1e-09	SPX domain
SPX	PF03105	357 - 385	2.6e-07	SPX domain
EXS	PF03124	475 - 802	1.1e-85	EXS family

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0010732)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G29060 AT4G25350
fragaria_vesca	FvH4_6g48060 FvH4_6g48060
malus_domestica	MD09G1054400.v1.1 MD17G1052300.v1.1
prunus_persica	Prupe.3G264100_v2.0.a1
pyrus_communis	pycom111g04570
rosa_chinensis	RchiOBHm_Chr2g0167381
rosa_laevigata	RLG00000021712 RLG00000021728
rosa_multiflora	Rmu_sc0001840.1_g000006
rosa_roxburghii	Rroxscaffold_2G00083560
rosa_rugosa	Rorug02G0529900.1 Rorug02G0530000
rosa_samantha	Rh2AG596800 Rh2BG608300 Rh2CG579100 Rh2DG619600
rosa_wichuraiana	Rw2G049680

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc65I	GGTACC	2 cut(s)	627, 2421
AccB1I	GGYRCC	3 cut(s)	520, 627, 2421
AccBSI	CCGCTC	2 cut(s)	124, 138
AccI	GTMKAC	2 cut(s)	742, 1932
AccII	CGCG	3 cut(s)	195, 294, 318
AccIII	TCCGGA	1 cut(s)	103
AclWI	GGATC	5 cut(s)	95, 155, 214, 1046, 2110
AcoI	YGGCCR	5 cut(s)	42, 74, 90, 139, 1353
AcsI	RAATTY	6 cut(s)	445, 810, 820, 1621, 1862, 2179
AcuI	CTGAAG	5 cut(s)	345, 864, 1642, 1834, 1970
AcvI	CACGTG	1 cut(s)	228
AfiI	CCNNNNNNNGG	4 cut(s)	21, 272, 1414, 1465
AflIII	ACRYGT	1 cut(s)	988
AjnI	CCWGG	2 cut(s)	379, 1842
AluBI	AGCT	8 cut(s)	199, 817, 1440, 1656, 1766, 1834, 2123, 2133
AluI	AGCT	8 cut(s)	199, 817, 1440, 1656, 1766, 1834, 2123, 2133
Alw21I	GWGCWC	2 cut(s)	1789, 2403
Alw26I	GTCTC	9 cut(s)	123, 267, 451, 652, 1027, 1388, 2167, 2196, 2260
AlwI	GGATC	5 cut(s)	95, 155, 214, 1046, 2110
AlwNI	CAGNNNCTG	1 cut(s)	1993
Ama87I	CYCGRG	2 cut(s)	571, 1172
Aor13HI	TCCGGA	1 cut(s)	103
ApeKI	GCWGC	1 cut(s)	853
ApoI	RAATTY	6 cut(s)	445, 810, 820, 1621, 1862, 2179
ArsI	GACNNNNNNTTYG	2 cut(s)	325, 357
Asp700I	GAANNNNTTC	5 cut(s)	34, 594, 2048, 2358, 2381
Asp718I	GGTACC	2 cut(s)	627, 2421
AspS9I	GGNCC	7 cut(s)	286, 346, 360, 383, 805, 1176, 1639
AvaI	CYCGRG	2 cut(s)	571, 1172
AvaII	GGWCC	5 cut(s)	286, 383, 805, 1176, 1639
BanI	GGYRCC	3 cut(s)	520, 627, 2421
BanII	GRGCYC	2 cut(s)	279, 410
BbrPI	CACGTG	1 cut(s)	228
BbsI	GAAGAC	3 cut(s)	1271, 1465, 2159
Bbv12I	GWGCWC	2 cut(s)	1789, 2403
BbvI	GCAGC	1 cut(s)	865
BccI	CCATC	9 cut(s)	605, 614, 712, 742, 796, 880, 1150, 1630, 2012
BceAI	ACGGC	1 cut(s)	2349
BciT130I	CCWGG	2 cut(s)	381, 1844
BcoDI	GTCTC	9 cut(s)	123, 267, 451, 652, 1027, 1388, 2167, 2196, 2260
BfmI	CTRYAG	1 cut(s)	1767
BglI	GCCNNNNNGGC	2 cut(s)	89, 529
BisI	GCNGC	6 cut(s)	45, 93, 139, 349, 854, 1353
BlpI	GCTNAGC	1 cut(s)	200
BlsI	GCNGC	6 cut(s)	46, 94, 140, 350, 855, 1354
BmcAI	AGTACT	1 cut(s)	2289
Bme1390I	CCNGG	2 cut(s)	381, 1844
Bme18I	GGWCC	5 cut(s)	286, 383, 805, 1176, 1639
BmeT110I	CYCGRG	2 cut(s)	571, 1172
BmgT120I	GGNCC	7 cut(s)	286, 346, 360, 383, 805, 1176, 1639
BmiI	GGNNCC	6 cut(s)	385, 522, 629, 1177, 1641, 2423
BmrFI	CCNGG	2 cut(s)	381, 1844
BmrI	ACTGGG	1 cut(s)	1562
BmsI	GCATC	4 cut(s)	17, 742, 1142, 2268
BmuI	ACTGGG	1 cut(s)	1562
BpiI	GAAGAC	3 cut(s)	1271, 1465, 2159
BplI	GAGNNNNNCTC	2 cut(s)	2193, 2225
BpmI	CTGGAG	1 cut(s)	1516
Bpu1102I	GCTNAGC	1 cut(s)	200
BpuEI	CTTGAG	2 cut(s)	545, 758
BsaAI	YACGTR	1 cut(s)	228
BsaI	GGTCTC	3 cut(s)	652, 1027, 1388
BsaJI	CCNNGG	5 cut(s)	39, 316, 363, 2244, 2365
BsaWI	WCCGGW	4 cut(s)	14, 103, 1018, 2385
BsaXI	ACNNNNNCTCC	4 cut(s)	247, 277, 494, 524
Bsc4I	CCNNNNNNNGG	4 cut(s)	21, 272, 1414, 1465
Bse1I	ACTGG	2 cut(s)	312, 1557
Bse3DI	GCAATG	1 cut(s)	1774
BseAI	TCCGGA	1 cut(s)	103
BseBI	CCWGG	2 cut(s)	381, 1844
BseDI	CCNNGG	5 cut(s)	39, 316, 363, 2244, 2365
BseLI	CCNNNNNNNGG	4 cut(s)	21, 272, 1414, 1465
BseMI	GCAATG	1 cut(s)	1774
BseMII	CTCAG	6 cut(s)	141, 758, 1491, 2162, 2212, 2255
BseNI	ACTGG	2 cut(s)	312, 1557
BseRI	GAGGAG	2 cut(s)	1779, 2024
BseX3I	CGGCCG	2 cut(s)	42, 90
BseXI	GCAGC	1 cut(s)	865
Bsh1236I	CGCG	3 cut(s)	195, 294, 318
Bsh1285I	CGRYCG	2 cut(s)	45, 93
BshNI	GGYRCC	3 cut(s)	520, 627, 2421
BsiEI	CGRYCG	2 cut(s)	45, 93
BsiHKAI	GWGCWC	2 cut(s)	1789, 2403
BsiHKCI	CYCGRG	2 cut(s)	571, 1172
BsiSI	CCGG	7 cut(s)	15, 77, 104, 524, 1019, 1584, 2386
BslFI	GGGAC	8 cut(s)	164, 334, 496, 579, 1189, 1332, 1664, 1904
BslI	CCNNNNNNNGG	4 cut(s)	21, 272, 1414, 1465
BsmAI	GTCTC	9 cut(s)	123, 267, 451, 652, 1027, 1388, 2167, 2196, 2260
BsmBI	CGTCTC	2 cut(s)	451, 2167
BsmFI	GGGAC	8 cut(s)	164, 334, 496, 579, 1189, 1332, 1664, 1904
BsmI	GAATGC	3 cut(s)	1135, 2028, 2429
Bso31I	GGTCTC	3 cut(s)	652, 1027, 1388
BsoBI	CYCGRG	2 cut(s)	571, 1172
Bsp1286I	GDGCHC	4 cut(s)	279, 410, 1789, 2403
Bsp13I	TCCGGA	1 cut(s)	103
Bsp1407I	TGTACA	2 cut(s)	1410, 1794
Bsp1720I	GCTNAGC	1 cut(s)	200
Bsp19I	CCATGG	2 cut(s)	363, 2244
BspCNI	CTCAG	6 cut(s)	140, 759, 1490, 2163, 2211, 2256
BspEI	TCCGGA	1 cut(s)	103
BspFNI	CGCG	3 cut(s)	195, 294, 318
BspHI	TCATGA	3 cut(s)	243, 1098, 1575
BspLI	GGNNCC	6 cut(s)	385, 522, 629, 1177, 1641, 2423
BspPI	GGATC	5 cut(s)	95, 155, 214, 1046, 2110
BspT107I	GGYRCC	3 cut(s)	520, 627, 2421
BspTNI	GGTCTC	3 cut(s)	652, 1027, 1388
BsrBI	CCGCTC	2 cut(s)	124, 138
BsrDI	GCAATG	1 cut(s)	1774
BsrGI	TGTACA	2 cut(s)	1410, 1794
BsrI	ACTGG	2 cut(s)	312, 1557
BssECI	CCNNGG	5 cut(s)	39, 316, 363, 2244, 2365
BssNAI	GTATAC	1 cut(s)	1933
BssT1I	CCWWGG	2 cut(s)	363, 2244
Bst1107I	GTATAC	1 cut(s)	1933
Bst2UI	CCWGG	2 cut(s)	381, 1844
Bst4CI	ACNGT	6 cut(s)	646, 1052, 1323, 1566, 2149, 2192
Bst6I	CTCTTC	2 cut(s)	717, 891
BstAPI	GCANNNNNTGC	1 cut(s)	2342
BstAUI	TGTACA	2 cut(s)	1410, 1794
BstBAI	YACGTR	1 cut(s)	228
BstC8I	GCNNGC	5 cut(s)	54, 85, 172, 197, 206
BstDEI	CTNAG	8 cut(s)	127, 200, 767, 1477, 2171, 2198, 2264, 2329
BstDSI	CCRYGG	4 cut(s)	316, 363, 2244, 2365
BstEII	GGTNACC	1 cut(s)	1801
BstFNI	CGCG	3 cut(s)	195, 294, 318
BstMAI	GTCTC	9 cut(s)	123, 267, 451, 652, 1027, 1388, 2167, 2196, 2260
BstMCI	CGRYCG	2 cut(s)	45, 93
BstNI	CCWGG	2 cut(s)	381, 1844
BstNSI	RCATGY	2 cut(s)	992, 1376
BstPI	GGTNACC	1 cut(s)	1801
BstSCI	CCNGG	2 cut(s)	379, 1842
BstSFI	CTRYAG	1 cut(s)	1767
BstUI	CGCG	3 cut(s)	195, 294, 318
BstV1I	GCAGC	1 cut(s)	865
BstV2I	GAAGAC	3 cut(s)	1271, 1465, 2159
BstX2I	RGATCY	2 cut(s)	160, 2115
BstXI	CCANNNNNNTGG	1 cut(s)	338
BstYI	RGATCY	2 cut(s)	160, 2115
BstZ17I	GTATAC	1 cut(s)	1933
BstZI	CGGCCG	2 cut(s)	42, 90
BtgI	CCRYGG	4 cut(s)	316, 363, 2244, 2365
BtsIMutI	CAGTG	3 cut(s)	610, 1057, 1994
Cac8I	GCNNGC	5 cut(s)	54, 85, 172, 197, 206
CaiI	CAGNNNCTG	1 cut(s)	1993
CciI	TCATGA	3 cut(s)	243, 1098, 1575
Cfr13I	GGNCC	7 cut(s)	286, 346, 360, 383, 805, 1176, 1639
Cfr42I	CCGCGG	1 cut(s)	319
CseI	GACGC	1 cut(s)	2007
DdeI	CTNAG	8 cut(s)	127, 200, 767, 1477, 2171, 2198, 2264, 2329
DraI	TTTAAA	2 cut(s)	961, 1537
EaeI	YGGCCR	5 cut(s)	42, 74, 90, 139, 1353
EagI	CGGCCG	2 cut(s)	42, 90
Eam1104I	CTCTTC	2 cut(s)	717, 891
EarI	CTCTTC	2 cut(s)	717, 891
EclXI	CGGCCG	2 cut(s)	42, 90
Eco130I	CCWWGG	2 cut(s)	363, 2244
Eco147I	AGGCCT	1 cut(s)	1847
Eco24I	GRGCYC	2 cut(s)	279, 410
Eco31I	GGTCTC	3 cut(s)	652, 1027, 1388
Eco47I	GGWCC	5 cut(s)	286, 383, 805, 1176, 1639
Eco52I	CGGCCG	2 cut(s)	42, 90
Eco57I	CTGAAG	5 cut(s)	345, 864, 1642, 1834, 1970
Eco72I	CACGTG	1 cut(s)	228
Eco88I	CYCGRG	2 cut(s)	571, 1172
Eco91I	GGTNACC	1 cut(s)	1801
EcoO109I	RGGNCCY	1 cut(s)	1176
EcoO65I	GGTNACC	1 cut(s)	1801
EcoRI	GAATTC	2 cut(s)	1862, 2179
EcoRII	CCWGG	2 cut(s)	379, 1842
EcoT14I	CCWWGG	2 cut(s)	363, 2244
EcoT22I	ATGCAT	1 cut(s)	1135
EcoT38I	GRGCYC	2 cut(s)	279, 410
ErhI	CCWWGG	2 cut(s)	363, 2244
Esp3I	CGTCTC	2 cut(s)	451, 2167
FalI	AAGNNNNNCTT	4 cut(s)	582, 614, 1130, 1162
FaqI	GGGAC	8 cut(s)	164, 334, 496, 579, 1189, 1332, 1664, 1904
FauI	CCCGC	2 cut(s)	287, 311
FauNDI	CATATG	1 cut(s)	1464
FblI	GTMKAC	2 cut(s)	742, 1932
Fnu4HI	GCNGC	6 cut(s)	45, 93, 139, 349, 854, 1353
FriOI	GRGCYC	2 cut(s)	279, 410
Fsp4HI	GCNGC	6 cut(s)	45, 93, 139, 349, 854, 1353
GluI	GCNGC	6 cut(s)	45, 93, 139, 349, 854, 1353
GsuI	CTGGAG	1 cut(s)	1516
HapII	CCGG	7 cut(s)	15, 77, 104, 524, 1019, 1584, 2386
HgaI	GACGC	1 cut(s)	2007
HindIII	AAGCTT	1 cut(s)	1654
HinfI	GANTC	4 cut(s)	116, 567, 1449, 1975
HpaII	CCGG	7 cut(s)	15, 77, 104, 524, 1019, 1584, 2386
Hpy166II	GTNNAC	5 cut(s)	438, 743, 1144, 1649, 1933
Hpy8I	GTNNAC	5 cut(s)	438, 743, 1144, 1649, 1933
Hpy99I	CGWCG	1 cut(s)	2001
HpyCH4III	ACNGT	6 cut(s)	646, 1052, 1323, 1566, 2149, 2192
HpyCH4IV	ACGT	3 cut(s)	227, 460, 635
HpyF3I	CTNAG	8 cut(s)	127, 200, 767, 1477, 2171, 2198, 2264, 2329
HpySE526I	ACGT	3 cut(s)	227, 460, 635
Kpn2I	TCCGGA	1 cut(s)	103
KpnI	GGTACC	2 cut(s)	631, 2425
KspI	CCGCGG	1 cut(s)	319
LmnI	GCTCC	2 cut(s)	61, 1792
Lsp1109I	GCAGC	1 cut(s)	865
LweI	GCATC	4 cut(s)	17, 742, 1142, 2268
MaeII	ACGT	3 cut(s)	227, 460, 635
MaeIII	GTNAC	4 cut(s)	640, 1003, 1189, 1801
MbiI	CCGCTC	2 cut(s)	124, 138
MfeI	CAATTG	5 cut(s)	826, 1079, 1338, 2058, 2136
MflI	RGATCY	2 cut(s)	160, 2115
MhlI	GDGCHC	4 cut(s)	279, 410, 1789, 2403
MlyI	GAGTC	2 cut(s)	125, 561
MmeI	TCCRAC	4 cut(s)	83, 264, 328, 2370
Mph1103I	ATGCAT	1 cut(s)	1135
MroI	TCCGGA	1 cut(s)	103
MroXI	GAANNNNTTC	5 cut(s)	34, 594, 2048, 2358, 2381
MseI	TTAA	7 cut(s)	353, 708, 960, 1271, 1536, 2033, 2252
MslI	CAYNNNNRTG	4 cut(s)	70, 861, 863, 1361
MspA1I	CMGCKG	1 cut(s)	318
MspI	CCGG	7 cut(s)	15, 77, 104, 524, 1019, 1584, 2386
MspR9I	CCNGG	2 cut(s)	381, 1844
MunI	CAATTG	5 cut(s)	826, 1079, 1338, 2058, 2136
Mva1269I	GAATGC	3 cut(s)	1135, 2028, 2429
MvaI	CCWGG	2 cut(s)	381, 1844
MvnI	CGCG	3 cut(s)	195, 294, 318
NcoI	CCATGG	2 cut(s)	363, 2244
NdeI	CATATG	1 cut(s)	1464
NlaIV	GGNNCC	6 cut(s)	385, 522, 629, 1177, 1641, 2423
NmeAIII	GCCGAG	2 cut(s)	20, 68
NmuCI	GTSAC	1 cut(s)	640
NsiI	ATGCAT	1 cut(s)	1135
NspI	RCATGY	2 cut(s)	992, 1376
PaeR7I	CTCGAG	1 cut(s)	571
PagI	TCATGA	3 cut(s)	243, 1098, 1575
PceI	AGGCCT	1 cut(s)	1847
PciI	ACATGT	1 cut(s)	988
PcsI	WCGNNNNNNNCGW	2 cut(s)	56, 1744
PctI	GAATGC	3 cut(s)	1135, 2028, 2429
PdmI	GAANNNNTTC	5 cut(s)	34, 594, 2048, 2358, 2381
PfeI	GAWTC	2 cut(s)	1449, 1975
PfoI	TCCNGGA	1 cut(s)	379
PkrI	GCNGC	6 cut(s)	46, 94, 140, 350, 855, 1354
PleI	GAGTC	2 cut(s)	124, 561
PmaCI	CACGTG	1 cut(s)	228
PmlI	CACGTG	1 cut(s)	228
PpsI	GAGTC	2 cut(s)	124, 561
Ppu21I	YACGTR	1 cut(s)	228
PpuMI	RGGWCCY	1 cut(s)	1176
PscI	ACATGT	1 cut(s)	988
Psp5II	RGGWCCY	1 cut(s)	1176
Psp6I	CCWGG	2 cut(s)	379, 1842
PspCI	CACGTG	1 cut(s)	228
PspEI	GGTNACC	1 cut(s)	1801
PspGI	CCWGG	2 cut(s)	379, 1842
PspN4I	GGNNCC	6 cut(s)	385, 522, 629, 1177, 1641, 2423
PspPI	GGNCC	7 cut(s)	286, 346, 360, 383, 805, 1176, 1639
PspPPI	RGGWCCY	1 cut(s)	1176
PstNI	CAGNNNCTG	1 cut(s)	1993
PsuI	RGATCY	2 cut(s)	160, 2115
RseI	CAYNNNNRTG	4 cut(s)	70, 861, 863, 1361
SacII	CCGCGG	1 cut(s)	319
SaqAI	TTAA	7 cut(s)	353, 708, 960, 1271, 1536, 2033, 2252
SatI	GCNGC	6 cut(s)	45, 93, 139, 349, 854, 1353
Sau96I	GGNCC	7 cut(s)	286, 346, 360, 383, 805, 1176, 1639
ScaI	AGTACT	1 cut(s)	2289
SchI	GAGTC	2 cut(s)	125, 561
ScrFI	CCNGG	2 cut(s)	381, 1844
SduI	GDGCHC	4 cut(s)	279, 410, 1789, 2403
SfaNI	GCATC	4 cut(s)	17, 742, 1142, 2268
SfcI	CTRYAG	1 cut(s)	1767
Sfr274I	CTCGAG	1 cut(s)	571
Sfr303I	CCGCGG	1 cut(s)	319
SgrBI	CCGCGG	1 cut(s)	319
SinI	GGWCC	5 cut(s)	286, 383, 805, 1176, 1639
SlaI	CTCGAG	1 cut(s)	571
SmiMI	CAYNNNNRTG	4 cut(s)	70, 861, 863, 1361
SmlI	CTYRAG	3 cut(s)	560, 571, 773
SmoI	CTYRAG	3 cut(s)	560, 571, 773
SseBI	AGGCCT	1 cut(s)	1847
StuI	AGGCCT	1 cut(s)	1847
StyD4I	CCNGG	2 cut(s)	379, 1842
StyI	CCWWGG	2 cut(s)	363, 2244
TaaI	ACNGT	6 cut(s)	646, 1052, 1323, 1566, 2149, 2192
TaiI	ACGT	3 cut(s)	230, 463, 638
TaqI	TCGA	2 cut(s)	572, 2299
TatI	WGTACW	6 cut(s)	1304, 1410, 1646, 1771, 1794, 2287
TauI	GCSGC	5 cut(s)	47, 95, 141, 351, 1355
TfiI	GAWTC	2 cut(s)	1449, 1975
Tru1I	TTAA	7 cut(s)	353, 708, 960, 1271, 1536, 2033, 2252
Tru9I	TTAA	7 cut(s)	353, 708, 960, 1271, 1536, 2033, 2252
TscAI	CASTG	3 cut(s)	610, 1057, 1994
TseFI	GTSAC	1 cut(s)	640
TseI	GCWGC	1 cut(s)	853
Tsp45I	GTSAC	1 cut(s)	640
TspGWI	ACGGA	1 cut(s)	2191
TspRI	CASTG	3 cut(s)	610, 1057, 1994
VpaK11BI	GGWCC	5 cut(s)	286, 383, 805, 1176, 1639
XapI	RAATTY	6 cut(s)	445, 810, 820, 1621, 1862, 2179
XbaI	TCTAGA	1 cut(s)	157
XceI	RCATGY	2 cut(s)	992, 1376
XcmI	CCANNNNNNNNNTGG	1 cut(s)	938
XhoI	CTCGAG	1 cut(s)	571
XmiI	GTMKAC	2 cut(s)	742, 1932
XmnI	GAANNNNTTC	5 cut(s)	34, 594, 2048, 2358, 2381
ZrmI	AGTACT	1 cut(s)	2289
Zsp2I	ATGCAT	1 cut(s)	1135

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.