Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

SuperScaffold_111

Orthogroup ID

OG0010732

Physical Location & Seq

Genomic Coordinates Reverse (-)

2782590 .. 2786269

Gene Structure 3680 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom111g04570.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2355 bp

ATGAAGTTCGGAAAAGAGTTCGTTTCGCAAATGGTGCCTGAATGGCGAGAAGCATACATGGACTACAACTCTCTCAAGCTTATCATAAAAGACATCCTGCGTTTCCGGAAGAAATATGCATCATCCACACCAATGGCCACGACACCGGCAGGGTCGGTGCTAAAGCGGAGGGTGGCACTCTACCGAGCATTCAGTGGGCTGACAAGCCGACAACGCGGCTCGCTGAGGAAGATGGAGGACGAGGAGATACTTGTGGCTGAAGAAGGGGAGGAAGGGCGGTGGCAGACAAGGTTCTTGATGCCGTCTGAGGACGGAGGAGAGTTTGAGGTTGTGTTTTTTAGGAGCCTGGACGATGAGTTTAACAAAGTGAATTGCTTTTACAAGAAGAAAGTTGGGGAAGTTGTGGAGGAGGCCGAGGAGTTGAGTAGGCAGATGGATGGTTTGATCGCTCTTAGGCTAAAGGTTGATAATCCAAAGGTGGATATTGGAGGAGGAAGTGAGTTGGCAAGCAATGGGATTTCTTCAGTCTCAGCAGTTCATCCAAGTGGTAGAAAAACAGGAGGGGAGGATATGGATGTAATTCAAGAAGTTGAGATGAGCAATGAAGGAGAAATATTGGAAGAAAATGAAGAGAGGGGAATCGAGGAATTGGAAACCGCTGACCGGAAACCCAACAGAGGCACGGTGAATATTATGGGGTTTAAACCACAACCACTAGAGGTTTTGGACCATATAAAGATCAACGTGGTGCCTGAAACTCCTGTATCAACAATCAAAAGCATATTCCAGCCGAATACGAAACCCGACTTCTCATTCAGCAAGAAAGAGCTGAAGAAAGTAGAAGAGCAAATGACACAGGCCTTTAGTGAGTTCTACAAAAAGCTCCGGCTTTTGAAAAGCTACTGTTTCCTTAATCAATTGGCCTTCTCGAAGATCATGAAGAAATATGACAAGTTCTCTTCAAGGCCTGCATCGAAGGCTTACTTGAATATGGTGGATAATTCTTATCTCGGTGGCAGCGATGAAGTTACTAGGCTTATGGAAAGGGTGGAGACTACCTTCATAAAGCACTTCGCAAATGGAAATCGAAGAAAGGGAATGAAGACATTAAGACCGAAAACTAAAAGGGAAAAGCATAGAAATACATTTTTCTTGGGGCTGCTCTTTGGGGGCTCGATTTCACTTACAGTAGCCATCATTGTGCTTACGCATGCAAGAAATATCCTTAAGAGTGCAGGGCATGATCTGTACATGGAAAACATATTTCCGCTGTACAGTTTGTTTGGATTCATTGTCCTACATCTGATGATGTTCTCAGGGAACATATTCTTTTGGAGGCGCTATCTTGTAAATTATCCATTTATCTTTGGCTTCAACCAAGGGTCAGAGATTGGTTACAGACAGCTATTCCTTATCAGTTCAGGACTTGCAATTCTTGCATTGGCTGGTACCATCTCAAATTTGGATATGGAGTTGGATCCGAGAACAAAAAGCTACGTAGCCGTGAAAGAATTGGTCCCCCTGGGCCTAGTCATTGTTGTGCTTCTTATAATGGTTTGTCCTTTCAACATTATATATCGTTCCAGTCGATATTTCCTCCTCCTGTGCATATTCCGTTGTCTTCTTGCTCCTCTTTATAAGGTTACCCTCCCTGATTTTTTCTTGGCAGATCAGCTTACTAGCCAGGTTCAAGCCTTCAGGAGTTTAGAATTCTACATTTGCTATTACGGTTGGGGGGACTTCAAAAAAAGATCGCACAACTGCCTTGACAGCCACGTTTTTAAATCTTTCTACTTCATTGTTGCAATGATTCCTTATTGGATGCGTTCGCTTCAGTGTGTGCGACGCTTGATAGAGGAGAAAGACAGAATGCAAGGGTTAAACGCGCTGAAATACTTCTCAACAATCGTTGCAGTAGCCATGAGAACAAGTTTTGACCTGAAAGCTGGGATGACATGGAAAATCCTCGCTATAATTAGTTCAGTTGTGGCAACTGTTTTCGGTACATATTGGGACATTGTCGTCGATTGGGGTCTTCTGCAACGAAATTCTAAGAACCCTTGGCTGAGAGAGAAACTCCTCGTATCAAACCACAATGTTTATTTTGTTGCCATGGGGTTGAATGTTCTACTGAGACTCGCTTGGATGCAGTCAGTATTAGGAATTAGAGGAGCGCCATTCGTCCATAAAACAGCCTTGATCGCGATAGTCGCCTGTTTAGAGATCATCCGTCGTGGCATTTGGAATTTCTTTCGGTTGGAGAATGAGCACTTGAACAACGTCGGAAAGTATCGCGCGTTCAAGTCTGTACCCCTACCCTTCAACTACGACCGTGATCACACCAAGAGCGGATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005794 GO:0005802 GO:0005886 GO:0008150 GO:0012505 GO:0016020 GO:0031984 GO:0042592 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044422 GO:0044424 GO:0044431 GO:0044444 GO:0044446 GO:0044464 GO:0048878 GO:0050801 GO:0055062 GO:0055065 GO:0055069 GO:0055076 GO:0055080 GO:0055081 GO:0055083 GO:0065007 GO:0065008 GO:0071944 GO:0072505 GO:0072506 GO:0072507 GO:0098771 GO:0098791

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

EXS SPX

Protein Analysis

785

Amino Acids

90.19

Weight (kDa)

9.36

Isoelectric Point (pI)

42.08

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
SPX	PF03105	1 - 332	1.4e-67	SPX domain
EXS	PF03124	421 - 758	2e-97	EXS family

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0010732)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G29060 AT4G25350
fragaria_vesca	FvH4_6g48060 FvH4_6g48060
malus_domestica	MD09G1054400.v1.1 MD17G1052300.v1.1
prunus_persica	Prupe.3G264100_v2.0.a1
pyrus_communis	pycom111g04570
rosa_chinensis	RchiOBHm_Chr2g0167381
rosa_laevigata	RLG00000021712 RLG00000021728
rosa_multiflora	Rmu_sc0001840.1_g000006
rosa_roxburghii	Rroxscaffold_2G00083560
rosa_rugosa	Rorug02G0529900.1 Rorug02G0530000
rosa_samantha	Rh2AG596800 Rh2BG608300 Rh2CG579100 Rh2DG619600
rosa_wichuraiana	Rw2G049680

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	2 cut(s)	1550, 1638
AasI	GACNNNNNNGTC	1 cut(s)	2021
Acc65I	GGTACC	1 cut(s)	1448
AccB1I	GGYRCC	3 cut(s)	34, 748, 1448
AccBSI	CCGCTC	1 cut(s)	2349
AccII	CGCG	5 cut(s)	216, 1886, 2204, 2295, 2297
AccIII	TCCGGA	1 cut(s)	105
AciI	CCGC	6 cut(s)	166, 216, 277, 657, 1268, 2349
AclWI	GGATC	2 cut(s)	1472, 1485
AcoI	YGGCCR	1 cut(s)	135
AcsI	RAATTY	4 cut(s)	1459, 1709, 2047, 2245
AcuI	CTGAAG	5 cut(s)	279, 507, 851, 1681, 1817
AfaI	GTAC	5 cut(s)	1250, 1274, 1450, 2005, 2310
AfiI	CCNNNNNNNGG	2 cut(s)	663, 677
AflII	CTTAAG	1 cut(s)	1226
AjnI	CCWGG	3 cut(s)	345, 1521, 1683
AluBI	AGCT	8 cut(s)	79, 829, 883, 900, 1405, 1494, 1675, 1946
AluI	AGCT	8 cut(s)	79, 829, 883, 900, 1405, 1494, 1675, 1946
Alw21I	GWGCWC	1 cut(s)	2271
Alw26I	GTCTC	3 cut(s)	532, 1046, 2128
AlwI	GGATC	2 cut(s)	1472, 1485
Aor13HI	TCCGGA	1 cut(s)	105
AoxI	GGCC	6 cut(s)	135, 411, 858, 921, 965, 1525
ApeKI	GCWGC	2 cut(s)	1017, 1159
ApoI	RAATTY	4 cut(s)	1459, 1709, 2047, 2245
Asp700I	GAANNNNTTC	2 cut(s)	1325, 1895
Asp718I	GGTACC	1 cut(s)	1448
AspLEI	GCGC	4 cut(s)	1341, 1888, 2176, 2297
AspS9I	GGNCC	3 cut(s)	727, 1516, 1525
AsuHPI	GGTGA	1 cut(s)	697
AvaII	GGWCC	2 cut(s)	727, 1516
BaeI	ACNNNNGTAYC	2 cut(s)	747, 780
BalI	TGGCCA	1 cut(s)	137
BamHI	GGATCC	1 cut(s)	1477
BanI	GGYRCC	3 cut(s)	34, 748, 1448
BanII	GRGCYC	1 cut(s)	1175
BbsI	GAAGAC	3 cut(s)	1109, 1613, 2027
Bbv12I	GWGCWC	1 cut(s)	2271
BbvCI	CCTCAGC	1 cut(s)	224
BbvI	GCAGC	2 cut(s)	1029, 1146
BccI	CCATC	5 cut(s)	226, 427, 431, 1202, 1460
BceAI	ACGGC	2 cut(s)	286, 1487
BciT130I	CCWGG	3 cut(s)	347, 1523, 1685
BclI	TGATCA	1 cut(s)	2335
BcoDI	GTCTC	3 cut(s)	532, 1046, 2128
BfaI	CTAG	4 cut(s)	716, 1032, 1529, 1680
BfoI	RGCGCY	2 cut(s)	1342, 2177
BfrI	CTTAAG	1 cut(s)	1226
BglI	GCCNNNNNGGC	1 cut(s)	43
BisI	GCNGC	3 cut(s)	217, 1018, 1160
BlsI	GCNGC	3 cut(s)	218, 1019, 1161
Bme1390I	CCNGG	3 cut(s)	347, 1523, 1685
Bme18I	GGWCC	2 cut(s)	727, 1516
BmgT120I	GGNCC	3 cut(s)	727, 1516, 1525
BmiI	GGNNCC	6 cut(s)	36, 344, 750, 1450, 1479, 1518
BmrFI	CCNGG	3 cut(s)	347, 1523, 1685
BmsI	GCATC	5 cut(s)	128, 288, 980, 1812, 2136
BpiI	GAAGAC	3 cut(s)	1109, 1613, 2027
BplI	GAGNNNNNCTC	2 cut(s)	2061, 2093
Bpu10I	CCTNAGC	1 cut(s)	224
BpuEI	CTTGAG	1 cut(s)	59
BsaAI	YACGTR	1 cut(s)	1498
BsaJI	CCNNGG	6 cut(s)	414, 1378, 1521, 1522, 2060, 2112
BsaWI	WCCGGW	2 cut(s)	105, 663
Bsc4I	CCNNNNNNNGG	2 cut(s)	663, 677
Bse118I	RCCGGY	1 cut(s)	145
Bse1I	ACTGG	1 cut(s)	1584
Bse3DI	GCAATG	3 cut(s)	517, 607, 1812
BseAI	TCCGGA	1 cut(s)	105
BseBI	CCWGG	3 cut(s)	347, 1523, 1685
BseDI	CCNNGG	6 cut(s)	414, 1378, 1521, 1522, 2060, 2112
BseGI	GGATG	9 cut(s)	93, 122, 442, 538, 580, 1827, 1956, 2151, 2226
BseLI	CCNNNNNNNGG	2 cut(s)	663, 677
BseMI	GCAATG	3 cut(s)	517, 607, 1812
BseMII	CTCAG	6 cut(s)	215, 297, 543, 1329, 2057, 2123
BseNI	ACTGG	1 cut(s)	1584
BseXI	GCAGC	2 cut(s)	1029, 1146
BseYI	CCCAGC	1 cut(s)	1946
BsgI	GTGCAG	1 cut(s)	1254
Bsh1236I	CGCG	5 cut(s)	216, 1886, 2204, 2295, 2297
Bsh1285I	CGRYCG	1 cut(s)	2332
BshFI	GGCC	6 cut(s)	137, 413, 860, 923, 967, 1527
BshNI	GGYRCC	3 cut(s)	34, 748, 1448
BsiEI	CGRYCG	1 cut(s)	2332
BsiHKAI	GWGCWC	1 cut(s)	2271
BsiSI	CCGG	4 cut(s)	106, 146, 664, 886
BslFI	GGGAC	3 cut(s)	1502, 1751, 2027
BslI	CCNNNNNNNGG	2 cut(s)	663, 677
BsmAI	GTCTC	3 cut(s)	532, 1046, 2128
BsmFI	GGGAC	3 cut(s)	1502, 1751, 2027
BsmI	GAATGC	2 cut(s)	188, 1875
BsnI	GGCC	6 cut(s)	137, 413, 860, 923, 967, 1527
Bsp1286I	GDGCHC	2 cut(s)	1175, 2271
Bsp13I	TCCGGA	1 cut(s)	105
Bsp1407I	TGTACA	2 cut(s)	1248, 1272
Bsp19I	CCATGG	1 cut(s)	2112
Bsp68I	TCGCGA	1 cut(s)	2204
BspACI	CCGC	6 cut(s)	166, 216, 277, 657, 1268, 2349
BspANI	GGCC	6 cut(s)	137, 413, 860, 923, 967, 1527
BspCNI	CTCAG	6 cut(s)	216, 298, 542, 1328, 2058, 2124
BspEI	TCCGGA	1 cut(s)	105
BspFNI	CGCG	5 cut(s)	216, 1886, 2204, 2295, 2297
BspHI	TCATGA	1 cut(s)	936
BspLI	GGNNCC	6 cut(s)	36, 344, 750, 1450, 1479, 1518
BspPI	GGATC	2 cut(s)	1472, 1485
BspQI	GCTCTTC	1 cut(s)	837
BspT107I	GGYRCC	3 cut(s)	34, 748, 1448
BspTI	CTTAAG	1 cut(s)	1226
BsrBI	CCGCTC	1 cut(s)	2349
BsrDI	GCAATG	3 cut(s)	517, 607, 1812
BsrFI	RCCGGY	1 cut(s)	145
BsrGI	TGTACA	2 cut(s)	1248, 1272
BsrI	ACTGG	1 cut(s)	1584
BssAI	RCCGGY	1 cut(s)	145
BssECI	CCNNGG	6 cut(s)	414, 1378, 1521, 1522, 2060, 2112
BssT1I	CCWWGG	3 cut(s)	1378, 2060, 2112
Bst2UI	CCWGG	3 cut(s)	347, 1523, 1685
Bst4CI	ACNGT	7 cut(s)	685, 905, 1189, 1277, 1730, 1996, 2333
Bst6I	CTCTTC	3 cut(s)	624, 837, 964
BstAFI	CTTAAG	1 cut(s)	1226
BstAPI	GCANNNNNTGC	2 cut(s)	34, 1436
BstAUI	TGTACA	2 cut(s)	1248, 1272
BstBAI	YACGTR	1 cut(s)	1498
BstC8I	GCNNGC	4 cut(s)	221, 508, 969, 1212
BstDEI	CTNAG	8 cut(s)	224, 306, 452, 529, 1315, 2052, 2066, 2132
BstDSI	CCRYGG	1 cut(s)	2112
BstEII	GGTNACC	1 cut(s)	1642
BstF5I	GGATG	9 cut(s)	93, 122, 442, 538, 580, 1827, 1956, 2151, 2226
BstFNI	CGCG	5 cut(s)	216, 1886, 2204, 2295, 2297
BstH2I	RGCGCY	2 cut(s)	1342, 2177
BstHHI	GCGC	4 cut(s)	1341, 1888, 2176, 2297
BstMAI	GTCTC	3 cut(s)	532, 1046, 2128
BstMCI	CGRYCG	1 cut(s)	2332
BstMWI	GCNNNNNNNGC	8 cut(s)	34, 43, 213, 977, 1436, 1770, 2201, 2210
BstNI	CCWGG	3 cut(s)	347, 1523, 1685
BstNSI	RCATGY	1 cut(s)	1214
BstPI	GGTNACC	1 cut(s)	1642
BstSCI	CCNGG	3 cut(s)	345, 1521, 1683
BstSNI	TACGTA	1 cut(s)	1498
BstUI	CGCG	5 cut(s)	216, 1886, 2204, 2295, 2297
BstV1I	GCAGC	2 cut(s)	1029, 1146
BstV2I	GAAGAC	3 cut(s)	1109, 1613, 2027
BstX2I	RGATCY	1 cut(s)	1477
BstXI	CCANNNNNNTGG	1 cut(s)	133
BstYI	RGATCY	1 cut(s)	1477
BsuRI	GGCC	6 cut(s)	137, 413, 860, 923, 967, 1527
BtgI	CCRYGG	1 cut(s)	2112
BtgZI	GCGATG	1 cut(s)	1035
BtsCI	GGATG	9 cut(s)	93, 122, 442, 538, 580, 1827, 1956, 2151, 2226
BtsIMutI	CAGTG	2 cut(s)	199, 1841
BtuMI	TCGCGA	1 cut(s)	2204
Cac8I	GCNNGC	4 cut(s)	221, 508, 969, 1212
CciI	TCATGA	1 cut(s)	936
CfoI	GCGC	4 cut(s)	1341, 1888, 2176, 2297
Cfr10I	RCCGGY	1 cut(s)	145
Cfr13I	GGNCC	3 cut(s)	727, 1516, 1525
CseI	GACGC	1 cut(s)	1854
Csp6I	GTAC	5 cut(s)	1249, 1273, 1449, 2004, 2309
CviAII	CATG	8 cut(s)	58, 937, 1211, 1241, 1252, 1921, 1956, 2113
CviQI	GTAC	5 cut(s)	1249, 1273, 1449, 2004, 2309
DdeI	CTNAG	8 cut(s)	224, 306, 452, 529, 1315, 2052, 2066, 2132
DraI	TTTAAA	2 cut(s)	703, 1783
DrdI	GACNNNNNNGTC	1 cut(s)	2021
DseDI	GACNNNNNNGTC	1 cut(s)	2021
EaeI	YGGCCR	1 cut(s)	135
Eam1104I	CTCTTC	3 cut(s)	624, 837, 964
EarI	CTCTTC	3 cut(s)	624, 837, 964
Eco105I	TACGTA	1 cut(s)	1498
Eco130I	CCWWGG	3 cut(s)	1378, 2060, 2112
Eco147I	AGGCCT	2 cut(s)	860, 967
Eco24I	GRGCYC	1 cut(s)	1175
Eco47I	GGWCC	2 cut(s)	727, 1516
Eco57I	CTGAAG	5 cut(s)	279, 507, 851, 1681, 1817
Eco91I	GGTNACC	1 cut(s)	1642
EcoO65I	GGTNACC	1 cut(s)	1642
EcoRI	GAATTC	1 cut(s)	1709
EcoRII	CCWGG	3 cut(s)	345, 1521, 1683
EcoT14I	CCWWGG	3 cut(s)	1378, 2060, 2112
EcoT22I	ATGCAT	1 cut(s)	121
EcoT38I	GRGCYC	1 cut(s)	1175
ErhI	CCWWGG	3 cut(s)	1378, 2060, 2112
FaeI	CATG	8 cut(s)	61, 940, 1214, 1244, 1255, 1924, 1959, 2116
FalI	AAGNNNNNCTT	2 cut(s)	968, 1000
FaqI	GGGAC	3 cut(s)	1502, 1751, 2027
FatI	CATG	8 cut(s)	57, 936, 1210, 1240, 1251, 1920, 1955, 2112
FbaI	TGATCA	1 cut(s)	2335
Fnu4HI	GCNGC	3 cut(s)	217, 1018, 1160
FokI	GGATG	9 cut(s)	80, 109, 449, 525, 587, 1834, 1963, 2158, 2213
FriOI	GRGCYC	1 cut(s)	1175
Fsp4HI	GCNGC	3 cut(s)	217, 1018, 1160
FspBI	CTAG	4 cut(s)	716, 1032, 1529, 1680
GlaI	GCGC	4 cut(s)	1340, 1887, 2175, 2296
GluI	GCNGC	3 cut(s)	217, 1018, 1160
GsaI	CCCAGC	1 cut(s)	1950
HaeII	RGCGCY	2 cut(s)	1342, 2177
HaeIII	GGCC	6 cut(s)	137, 413, 860, 923, 967, 1527
HapII	CCGG	4 cut(s)	106, 146, 664, 886
HgaI	GACGC	1 cut(s)	1854
HhaI	GCGC	4 cut(s)	1341, 1888, 2176, 2297
Hin1II	CATG	8 cut(s)	61, 940, 1214, 1244, 1255, 1924, 1959, 2116
Hin6I	GCGC	4 cut(s)	1339, 1886, 2174, 2295
HinP1I	GCGC	4 cut(s)	1339, 1886, 2174, 2295
HindIII	AAGCTT	1 cut(s)	77
HinfI	GANTC	4 cut(s)	639, 1287, 1810, 2136
HpaII	CCGG	4 cut(s)	106, 146, 664, 886
HphI	GGTGA	1 cut(s)	697
Hpy188I	TCNGA	6 cut(s)	11, 307, 1305, 1387, 1482, 2285
Hpy188III	TCNNGA	8 cut(s)	106, 295, 584, 928, 937, 1422, 1699, 2203
Hpy99I	CGWCG	4 cut(s)	1848, 2027, 2235, 2285
HpyAV	CCTTC	8 cut(s)	257, 266, 599, 934, 970, 1069, 1705, 2329
HpyCH4III	ACNGT	7 cut(s)	685, 905, 1189, 1277, 1730, 1996, 2333
HpyCH4IV	ACGT	4 cut(s)	744, 1497, 1776, 2280
HpyF10VI	GCNNNNNNNGC	8 cut(s)	34, 43, 213, 977, 1436, 1770, 2201, 2210
HpyF3I	CTNAG	8 cut(s)	224, 306, 452, 529, 1315, 2052, 2066, 2132
HpySE526I	ACGT	4 cut(s)	744, 1497, 1776, 2280
Hsp92II	CATG	8 cut(s)	61, 940, 1214, 1244, 1255, 1924, 1959, 2116
HspAI	GCGC	4 cut(s)	1339, 1886, 2174, 2295
Kpn2I	TCCGGA	1 cut(s)	105
KpnI	GGTACC	1 cut(s)	1452
Ksp22I	TGATCA	1 cut(s)	2335
LguI	GCTCTTC	1 cut(s)	837
LmnI	GCTCC	4 cut(s)	342, 888, 1633, 2171
Lsp1109I	GCAGC	2 cut(s)	1029, 1146
LweI	GCATC	5 cut(s)	128, 288, 980, 1812, 2136
MaeI	CTAG	4 cut(s)	716, 1032, 1529, 1680
MaeII	ACGT	4 cut(s)	744, 1497, 1776, 2280
MaeIII	GTNAC	3 cut(s)	1027, 1394, 1642
MbiI	CCGCTC	1 cut(s)	2349
MfeI	CAATTG	1 cut(s)	917
MflI	RGATCY	1 cut(s)	1477
MhlI	GDGCHC	2 cut(s)	1175, 2271
MlsI	TGGCCA	1 cut(s)	137
MluNI	TGGCCA	1 cut(s)	137
MlyI	GAGTC	1 cut(s)	2130
MmeI	TCCRAC	3 cut(s)	1455, 2238, 2263
Mox20I	TGGCCA	1 cut(s)	137
Mph1103I	ATGCAT	1 cut(s)	121
MroI	TCCGGA	1 cut(s)	105
MroXI	GAANNNNTTC	2 cut(s)	1325, 1895
MscI	TGGCCA	1 cut(s)	137
MseI	TTAA	7 cut(s)	360, 702, 912, 1109, 1227, 1782, 1880
MslI	CAYNNNNRTG	4 cut(s)	131, 543, 1199, 1538
Msp20I	TGGCCA	1 cut(s)	137
MspA1I	CMGCKG	2 cut(s)	659, 1270
MspCI	CTTAAG	1 cut(s)	1226
MspI	CCGG	4 cut(s)	106, 146, 664, 886
MspR9I	CCNGG	3 cut(s)	347, 1523, 1685
MssI	GTTTAAAC	1 cut(s)	703
MunI	CAATTG	1 cut(s)	917
Mva1269I	GAATGC	2 cut(s)	188, 1875
MvaI	CCWGG	3 cut(s)	347, 1523, 1685
MvnI	CGCG	5 cut(s)	216, 1886, 2204, 2295, 2297
MwoI	GCNNNNNNNGC	8 cut(s)	34, 43, 213, 977, 1436, 1770, 2201, 2210
NcoI	CCATGG	1 cut(s)	2112
NlaIII	CATG	8 cut(s)	61, 940, 1214, 1244, 1255, 1924, 1959, 2116
NlaIV	GGNNCC	6 cut(s)	36, 344, 750, 1450, 1479, 1518
NmeAIII	GCCGAG	1 cut(s)	439
NruI	TCGCGA	1 cut(s)	2204
NsiI	ATGCAT	1 cut(s)	121
NspI	RCATGY	1 cut(s)	1214
PaeI	GCATGC	1 cut(s)	1214
PagI	TCATGA	1 cut(s)	936
PasI	CCCWGGG	1 cut(s)	1522
PceI	AGGCCT	2 cut(s)	860, 967
PciSI	GCTCTTC	1 cut(s)	837
PcsI	WCGNNNNNNNCGW	2 cut(s)	1017, 1585
PctI	GAATGC	2 cut(s)	188, 1875
PdmI	GAANNNNTTC	2 cut(s)	1325, 1895
PfeI	GAWTC	3 cut(s)	639, 1287, 1810
PflFI	GACNNNGTC	1 cut(s)	2018
PkrI	GCNGC	3 cut(s)	218, 1019, 1161
PleI	GAGTC	1 cut(s)	2130
PmeI	GTTTAAAC	1 cut(s)	703
PpsI	GAGTC	1 cut(s)	2130
Ppu21I	YACGTR	1 cut(s)	1498
PsiI	TTATAA	2 cut(s)	1550, 1638
Psp6I	CCWGG	3 cut(s)	345, 1521, 1683
PspEI	GGTNACC	1 cut(s)	1642
PspFI	CCCAGC	1 cut(s)	1946
PspGI	CCWGG	3 cut(s)	345, 1521, 1683
PspN4I	GGNNCC	6 cut(s)	36, 344, 750, 1450, 1479, 1518
PspPI	GGNCC	3 cut(s)	727, 1516, 1525
PsrI	GAACNNNNNNTAC	2 cut(s)	2282, 2314
PsuI	RGATCY	1 cut(s)	1477
PsyI	GACNNNGTC	1 cut(s)	2018
RruI	TCGCGA	1 cut(s)	2204
RsaI	GTAC	5 cut(s)	1250, 1274, 1450, 2005, 2310
RsaNI	GTAC	5 cut(s)	1249, 1273, 1449, 2004, 2309
RseI	CAYNNNNRTG	4 cut(s)	131, 543, 1199, 1538
SapI	GCTCTTC	1 cut(s)	837
SaqAI	TTAA	7 cut(s)	360, 702, 912, 1109, 1227, 1782, 1880
SatI	GCNGC	3 cut(s)	217, 1018, 1160
Sau96I	GGNCC	3 cut(s)	727, 1516, 1525
SchI	GAGTC	1 cut(s)	2130
ScrFI	CCNGG	3 cut(s)	347, 1523, 1685
SduI	GDGCHC	2 cut(s)	1175, 2271
SfaNI	GCATC	5 cut(s)	128, 288, 980, 1812, 2136
SinI	GGWCC	2 cut(s)	727, 1516
SmiMI	CAYNNNNRTG	4 cut(s)	131, 543, 1199, 1538
SmlI	CTYRAG	2 cut(s)	74, 1226
SmoI	CTYRAG	2 cut(s)	74, 1226
SnaBI	TACGTA	1 cut(s)	1498
SphI	GCATGC	1 cut(s)	1214
SseBI	AGGCCT	2 cut(s)	860, 967
SsiI	CCGC	6 cut(s)	166, 216, 277, 657, 1268, 2349
SspI	AATATT	2 cut(s)	615, 691
SspMI	CTAG	4 cut(s)	716, 1032, 1529, 1680
StuI	AGGCCT	2 cut(s)	860, 967
StyD4I	CCNGG	3 cut(s)	345, 1521, 1683
StyI	CCWWGG	3 cut(s)	1378, 2060, 2112
TaaI	ACNGT	7 cut(s)	685, 905, 1189, 1277, 1730, 1996, 2333
TaiI	ACGT	4 cut(s)	747, 1500, 1779, 2283
TaqI	TCGA	7 cut(s)	642, 929, 974, 1087, 1175, 1588, 2025
TaqII	GACCGA	1 cut(s)	1129
TatI	WGTACW	2 cut(s)	1248, 1272
TauI	GCSGC	1 cut(s)	219
TfiI	GAWTC	3 cut(s)	639, 1287, 1810
Tru1I	TTAA	7 cut(s)	360, 702, 912, 1109, 1227, 1782, 1880
Tru9I	TTAA	7 cut(s)	360, 702, 912, 1109, 1227, 1782, 1880
TscAI	CASTG	2 cut(s)	199, 1841
TseI	GCWGC	2 cut(s)	1017, 1159
TspGWI	ACGGA	3 cut(s)	327, 1604, 2219
TspRI	CASTG	2 cut(s)	199, 1841
Tth111I	GACNNNGTC	1 cut(s)	2018
Vha464I	CTTAAG	1 cut(s)	1226
VpaK11BI	GGWCC	2 cut(s)	727, 1516
XapI	RAATTY	4 cut(s)	1459, 1709, 2047, 2245
XceI	RCATGY	1 cut(s)	1214
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1459
XmnI	GAANNNNTTC	2 cut(s)	1325, 1895
XspI	CTAG	4 cut(s)	716, 1032, 1529, 1680
Zsp2I	ATGCAT	1 cut(s)	121

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.