MD09G1082600.v1.1

proline-rich domain in spliceosome associated proteins

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr09
OG0007074
Physical Location & Seq
Forward (+)
5788044 .. 5793066
5023 bp
Loading structure...
UTR
Exon/CDS
Intron
MD09G1082600.v1.1.491

Sequence Viewer

Length: 1800 bp
ATGGAATCCAAGAATTTTATCAGTCTCCCTGATTCTGGTGATTCTGTCATCGAGAATGCGGGGCATGAAAGCGATGTTCAATATGAAGTTAAAGAAAACGGGGAGATTCTGGGGCATGAAAGTGATGTTCAATGTGAAGTTCAAGCTAACAGTGAGAACCTGAGGCATGAAAGTGGTGTTCAATATGAAGTTAGCCATTGCATGCTGGAATCAAACCTTGAAAAAGAATTGGTTGATGGTGATTCGGATATGGAAATCGAGGACATAAACAACCTTCCTGCCTTGAACAGTTCTCGTTCGGCAAATGAAGAAATCAAATTAGTGGGTAACAAGAACGGGGGTGCTCATTGTATACAGTCTGAAACTGTTACAGTTGCAGGGGAGTCAAATGTTTTGTTCCCAAAGGTGCATGAGAATGGTTTCCTTCCGGTCCAAGATTCAAGTACCTTTGAAGTCCACAAAAAGGGTGGCACTTCTATATCAGGTGTTAAGAGAGCTAGAATGACAGTTGATGAACAGCAAGCTTCAGTGCGTGTGACATTTGATTCATTGACAAGAGCTAGTAAACAAAAGCTTGAGGAACTATTACAGCAGTGGTCAGAGTGGCATGCAAAGCATGTTTCTTCATCTCAAGATTCTATTGAAGTAGTGGAATCAGGTGAAGAGATCTTCTTTCCAGCTCTTCATGTTGGCATAGAGAAGACATCTGCAGTGTCTTTTTGGATGGACAACCAAACACGGAAAGCAGATAACAACGAATCCAACCTTTTGGATAACAATGACGTGCCCCTGTATGATCGCGGTTATGCCTTAGGTTTGACTTTGGCTGGTAGCTCAGTTAATGCAGAGGGAGGCTTGGAGATTATAGATGATGCAAGTCGCTGTTTCAATTGTGGCTCTTATAGTCATTCGTTGAAAAAATGCCCAAAGCCTCGTAACCATGCTGCTGTCAACAGTGCTCGTAAACAGCTAAAGTCCAAACGTAATCAAAATGCTAATTCCCGTAATCCAACACGATATTATCAGGATTCTCCAGCTGGAAAGTATGATGGTTTAAGGCCTGGTGTTCTCGATTCTGAGACACGGAAGCTTTTGGGGCTTGGGGAGTTTGATCCACCGCCTTGGCTTAACAGAATGCGAGAAATTGGTTACCCACCGGGATATCTAGATGTAGATGATGAGGATCAGCCATCAGGCATAATAATATATGCTGATGGGGAAATTAAGGAAGAACAGGAGGACGGTGAAATTGTTCAGACAGACTATGCTGACCCGGAGAGGAAAAAGACAGTCGAATTTCCAGGAGTAAACGCACCAATCCCAGAAAATGCTGATGAGAGGCTTTGGGCGCCTGGACATTCAATTGGAGATCTCTCTAGGAACCGCTCACACAACAGAATAAGCCATCATTCGGAACTTGTCAGCAGAGGGCATCACCGCGAGCAAAGGTGGTCCGGGGATTATAGAGACGATGGGCCTCCTGGTGTTGACCCAGGTTTTGCGCCATCTAGTTACCCTCCAAGATATGGTAGTTATGATTACGGTTACAACTCTCACAGTTCAAGTGCTTCAGCACCAAGAAGTCCTACCTTCGGAAGGTCCCAGTCAGACAGAGGTCGAAGAATCTCTTCGTTCAATGAAGGTTCTTTTCCTTACTCCAATTCTCGTCATTCGCCAAAGGATTATGGCGCGGGGAATACTGAAAGTTGGAATGATGAAAGCAGGAATGACTATGACCTTGATAATTCAAGTTATAGTAGGGATAGGCTAGACAGGTATCGCCATCATCGTTGGAGGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0031974 GO:0031981 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044464 GO:0070013
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
PSP zf-CCHC

Protein Analysis

600

Amino Acids

67.02

Weight (kDa)

5.16

Isoelectric Point (pI)

55.76

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PSP PF04046 353 - 390 4.1e-12 PSP
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 1348
AccB7I CCANNNNNTGG 1 cut(s) 1526
AccBSI CCGCTC 1 cut(s) 1386
AccI GTMKAC 1 cut(s) 352
AccII CGCG 3 cut(s) 801, 1440, 1691
AciI CCGC 6 cut(s) 59, 801, 1118, 1384, 1438, 1691
AclWI GGATC 2 cut(s) 1106, 1191
AcsI RAATTY 2 cut(s) 13, 1295
AcuI CTGAAG 2 cut(s) 510, 1554
AcyI GRCGYC 1 cut(s) 1349
AfaI GTAC 1 cut(s) 445
AfiI CCNNNNNNNGG 6 cut(s) 35, 463, 1411, 1526, 1592, 1596
AjiI CACGTC 1 cut(s) 784
AjnI CCWGG 5 cut(s) 1060, 1300, 1351, 1480, 1492
Alw21I GWGCWC 2 cut(s) 346, 961
Alw26I GTCTC 3 cut(s) 29, 1073, 1461
AlwI GGATC 2 cut(s) 1106, 1191
AoxI GGCC 2 cut(s) 1058, 1475
ApeKI GCWGC 1 cut(s) 944
ApoI RAATTY 2 cut(s) 13, 1295
ArsI GACNNNNNNTTYG 2 cut(s) 1481, 1513
Asp700I GAANNNNTTC 3 cut(s) 419, 1251, 1627
AspLEI GCGC 3 cut(s) 1351, 1504, 1691
AspS9I GGNCC 4 cut(s) 430, 1452, 1475, 1599
AsuC2I CCSGG 3 cut(s) 1158, 1274, 1456
AsuHPI GGTGA 5 cut(s) 50, 251, 671, 1256, 1427
AvaII GGWCC 3 cut(s) 430, 1452, 1599
AxyI CCTNAGG 2 cut(s) 161, 811
BaeGI GKGCMC 1 cut(s) 789
BanI GGYRCC 1 cut(s) 1348
BbsI GAAGAC 1 cut(s) 707
Bbv12I GWGCWC 2 cut(s) 346, 961
BbvI GCAGC 1 cut(s) 931
BccI CCATC 9 cut(s) 230, 718, 1043, 1198, 1208, 1413, 1466, 1513, 1791
BciT130I CCWGG 5 cut(s) 1062, 1302, 1353, 1482, 1494
BcnI CCSGG 3 cut(s) 1158, 1274, 1456
BcoDI GTCTC 3 cut(s) 29, 1073, 1461
BfaI CTAG 6 cut(s) 498, 561, 1166, 1377, 1509, 1769
BfmI CTRYAG 1 cut(s) 708
BfoI RGCGCY 1 cut(s) 1352
BglII AGATCT 2 cut(s) 666, 1369
BisI GCNGC 1 cut(s) 945
BlsI GCNGC 1 cut(s) 946
Bme1390I CCNGG 8 cut(s) 1062, 1158, 1274, 1302, 1353, 1456, 1482, 1494
Bme18I GGWCC 3 cut(s) 430, 1452, 1599
BmgBI CACGTC 1 cut(s) 784
BmgT120I GGNCC 4 cut(s) 430, 1452, 1475, 1599
BmiI GGNNCC 3 cut(s) 1350, 1382, 1601
BmrFI CCNGG 8 cut(s) 1062, 1158, 1274, 1302, 1353, 1456, 1482, 1494
BmrI ACTGGG 1 cut(s) 1597
BmsI GCATC 2 cut(s) 862, 1441
BmuI ACTGGG 1 cut(s) 1597
BoxI GACNNNNGTC 1 cut(s) 1614
BpiI GAAGAC 1 cut(s) 707
BpmI CTGGAG 1 cut(s) 1017
BpuEI CTTGAG 2 cut(s) 596, 615
BpuMI CCSGG 3 cut(s) 1158, 1274, 1456
BsaBI GATNNNNATC 1 cut(s) 1182
BsaHI GRCGYC 1 cut(s) 1349
BsaJI CCNNGG 3 cut(s) 1121, 1455, 1492
BsaWI WCCGGW 1 cut(s) 427
Bsc4I CCNNNNNNNGG 6 cut(s) 35, 463, 1411, 1526, 1592, 1596
Bse1I ACTGG 1 cut(s) 1603
Bse21I CCTNAGG 2 cut(s) 161, 811
Bse3DI GCAATG 1 cut(s) 196
Bse8I GATNNNNATC 1 cut(s) 1182
BseBI CCWGG 5 cut(s) 1062, 1302, 1353, 1482, 1494
BseDI CCNNGG 3 cut(s) 1121, 1455, 1492
BseGI GGATG 1 cut(s) 729
BseJI GATNNNNATC 1 cut(s) 1182
BseLI CCNNNNNNNGG 6 cut(s) 35, 463, 1411, 1526, 1592, 1596
BseMI GCAATG 1 cut(s) 196
BseMII CTCAG 3 cut(s) 152, 849, 1068
BseNI ACTGG 1 cut(s) 1603
BseSI GKGCMC 1 cut(s) 789
BseXI GCAGC 1 cut(s) 931
Bsh1236I CGCG 3 cut(s) 801, 1440, 1691
BshFI GGCC 2 cut(s) 1060, 1477
BshNI GGYRCC 1 cut(s) 1348
BsiHKAI GWGCWC 2 cut(s) 346, 961
BsiSI CCGG 4 cut(s) 428, 1157, 1274, 1455
BslFI GGGAC 1 cut(s) 1585
BslI CCNNNNNNNGG 6 cut(s) 35, 463, 1411, 1526, 1592, 1596
BsmAI GTCTC 3 cut(s) 29, 1073, 1461
BsmBI CGTCTC 1 cut(s) 1461
BsmFI GGGAC 1 cut(s) 1585
BsmI GAATGC 2 cut(s) 61, 1140
BsnI GGCC 2 cut(s) 1060, 1477
Bsp1286I GDGCHC 3 cut(s) 346, 789, 961
Bsp143I GATC 5 cut(s) 666, 796, 1111, 1183, 1369
BspACI CCGC 6 cut(s) 59, 801, 1118, 1384, 1438, 1691
BspANI GGCC 2 cut(s) 1060, 1477
BspCNI CTCAG 3 cut(s) 153, 848, 1069
BspFNI CGCG 3 cut(s) 801, 1440, 1691
BspLI GGNNCC 3 cut(s) 1350, 1382, 1601
BspMAI CTGCAG 1 cut(s) 712
BspPI GGATC 2 cut(s) 1106, 1191
BspQI GCTCTTC 1 cut(s) 687
BspT107I GGYRCC 1 cut(s) 1348
BsrBI CCGCTC 1 cut(s) 1386
BsrDI GCAATG 1 cut(s) 196
BsrI ACTGG 1 cut(s) 1603
BssECI CCNNGG 3 cut(s) 1121, 1455, 1492
BssMI GATC 5 cut(s) 666, 796, 1111, 1183, 1369
BssNAI GTATAC 1 cut(s) 353
BssNI GRCGYC 1 cut(s) 1349
BssT1I CCWWGG 1 cut(s) 1121
Bst1107I GTATAC 1 cut(s) 353
Bst2UI CCWGG 5 cut(s) 1062, 1302, 1353, 1482, 1494
Bst6I CTCTTC 3 cut(s) 657, 687, 1633
BstACI GRCGYC 1 cut(s) 1349
BstC8I GCNNGC 4 cut(s) 203, 522, 609, 1442
BstDEI CTNAG 4 cut(s) 161, 811, 835, 1077
BstEII GGTNACC 1 cut(s) 1148
BstENI CCTNNNNNAGG 1 cut(s) 1594
BstF5I GGATG 1 cut(s) 729
BstFNI CGCG 3 cut(s) 801, 1440, 1691
BstH2I RGCGCY 1 cut(s) 1352
BstHHI GCGC 3 cut(s) 1351, 1504, 1691
BstKTI GATC 5 cut(s) 669, 799, 1114, 1186, 1372
BstMAI GTCTC 3 cut(s) 29, 1073, 1461
BstMBI GATC 5 cut(s) 666, 796, 1111, 1183, 1369
BstMWI GCNNNNNNNGC 3 cut(s) 613, 1096, 1348
BstNI CCWGG 5 cut(s) 1062, 1302, 1353, 1482, 1494
BstNSI RCATGY 3 cut(s) 205, 611, 620
BstPAI GACNNNNGTC 1 cut(s) 1614
BstPI GGTNACC 1 cut(s) 1148
BstSCI CCNGG 8 cut(s) 1060, 1156, 1272, 1300, 1351, 1454, 1480, 1492
BstSFI CTRYAG 1 cut(s) 708
BstSLI GKGCMC 1 cut(s) 789
BstUI CGCG 3 cut(s) 801, 1440, 1691
BstV1I GCAGC 1 cut(s) 931
BstV2I GAAGAC 1 cut(s) 707
BstX2I RGATCY 2 cut(s) 666, 1369
BstXI CCANNNNNNTGG 2 cut(s) 769, 1122
BstYI RGATCY 2 cut(s) 666, 1369
BstZ17I GTATAC 1 cut(s) 353
Bsu36I CCTNAGG 2 cut(s) 161, 811
BsuRI GGCC 2 cut(s) 1060, 1477
BtgZI GCGATG 1 cut(s) 87
BtrI CACGTC 1 cut(s) 784
BtsCI GGATG 1 cut(s) 729
BtsI GCAGTG 2 cut(s) 599, 717
BtsIMutI CAGTG 5 cut(s) 157, 534, 599, 717, 961
Cac8I GCNNGC 4 cut(s) 203, 522, 609, 1442
CfoI GCGC 3 cut(s) 1351, 1504, 1691
Cfr13I GGNCC 4 cut(s) 430, 1452, 1475, 1599
Csp6I GTAC 1 cut(s) 444
CspCI CAANNNNNGTGG 2 cut(s) 448, 483
CviAII CATG 9 cut(s) 65, 116, 167, 202, 410, 608, 617, 686, 941
CviQI GTAC 1 cut(s) 444
DdeI CTNAG 4 cut(s) 161, 811, 835, 1077
DinI GGCGCC 1 cut(s) 1350
DpnI GATC 5 cut(s) 668, 798, 1113, 1185, 1371
DpnII GATC 5 cut(s) 666, 796, 1111, 1183, 1369
Eam1104I CTCTTC 3 cut(s) 657, 687, 1633
EarI CTCTTC 3 cut(s) 657, 687, 1633
Eco130I CCWWGG 1 cut(s) 1121
Eco147I AGGCCT 1 cut(s) 1060
Eco32I GATATC 1 cut(s) 1163
Eco47I GGWCC 3 cut(s) 430, 1452, 1599
Eco57I CTGAAG 2 cut(s) 510, 1554
Eco81I CCTNAGG 2 cut(s) 161, 811
Eco91I GGTNACC 1 cut(s) 1148
EcoNI CCTNNNNNAGG 1 cut(s) 1594
EcoO109I RGGNCCY 1 cut(s) 1599
EcoO65I GGTNACC 1 cut(s) 1148
EcoRII CCWGG 5 cut(s) 1060, 1300, 1351, 1480, 1492
EcoRV GATATC 1 cut(s) 1163
EcoT14I CCWWGG 1 cut(s) 1121
EgeI GGCGCC 1 cut(s) 1350
EheI GGCGCC 1 cut(s) 1350
ErhI CCWWGG 1 cut(s) 1121
Esp3I CGTCTC 1 cut(s) 1461
FaeI CATG 9 cut(s) 68, 119, 170, 205, 413, 611, 620, 689, 944
FalI AAGNNNNNCTT 2 cut(s) 1612, 1644
FaqI GGGAC 1 cut(s) 1585
FatI CATG 9 cut(s) 64, 115, 166, 201, 409, 607, 616, 685, 940
FauI CCCGC 2 cut(s) 52, 1684
FblI GTMKAC 1 cut(s) 352
Fnu4HI GCNGC 1 cut(s) 945
FokI GGATG 1 cut(s) 736
Fsp4HI GCNGC 1 cut(s) 945
FspBI CTAG 6 cut(s) 498, 561, 1166, 1377, 1509, 1769
GlaI GCGC 3 cut(s) 1350, 1503, 1690
GluI GCNGC 1 cut(s) 945
GsuI CTGGAG 1 cut(s) 1017
HaeII RGCGCY 1 cut(s) 1352
HaeIII GGCC 2 cut(s) 1060, 1477
HapII CCGG 4 cut(s) 428, 1157, 1274, 1455
HhaI GCGC 3 cut(s) 1351, 1504, 1691
Hin1I GRCGYC 1 cut(s) 1349
Hin1II CATG 9 cut(s) 68, 119, 170, 205, 413, 611, 620, 689, 944
Hin6I GCGC 3 cut(s) 1349, 1502, 1689
HinP1I GCGC 3 cut(s) 1349, 1502, 1689
HincII GTYRAC 2 cut(s) 952, 1489
HindII GTYRAC 2 cut(s) 952, 1489
HindIII AAGCTT 3 cut(s) 522, 572, 1088
HpaII CCGG 4 cut(s) 428, 1157, 1274, 1455
HphI GGTGA 5 cut(s) 50, 251, 671, 1256, 1427
Hpy166II GTNNAC 7 cut(s) 353, 457, 566, 952, 965, 1309, 1489
Hpy188I TCNGA 8 cut(s) 247, 361, 601, 1078, 1257, 1414, 1595, 1609
Hpy188III TCNNGA 5 cut(s) 52, 632, 1025, 1070, 1166
Hpy8I GTNNAC 7 cut(s) 353, 457, 566, 952, 965, 1309, 1489
HpyAV CCTTC 5 cut(s) 284, 434, 1590, 1600, 1634
HpyCH4IV ACGT 2 cut(s) 783, 982
HpyCH4V TGCA 7 cut(s) 201, 377, 409, 611, 710, 845, 875
HpyF10VI GCNNNNNNNGC 3 cut(s) 613, 1096, 1348
HpyF3I CTNAG 4 cut(s) 161, 811, 835, 1077
HpySE526I ACGT 2 cut(s) 783, 982
Hsp92I GRCGYC 1 cut(s) 1349
Hsp92II CATG 9 cut(s) 68, 119, 170, 205, 413, 611, 620, 689, 944
HspAI GCGC 3 cut(s) 1349, 1502, 1689
KasI GGCGCC 1 cut(s) 1348
Kzo9I GATC 5 cut(s) 666, 796, 1111, 1183, 1369
LguI GCTCTTC 1 cut(s) 687
Lsp1109I GCAGC 1 cut(s) 931
LweI GCATC 2 cut(s) 862, 1441
MaeI CTAG 6 cut(s) 498, 561, 1166, 1377, 1509, 1769
MaeII ACGT 2 cut(s) 783, 982
MaeIII GTNAC 7 cut(s) 326, 367, 535, 935, 1148, 1511, 1544
MalI GATC 5 cut(s) 668, 798, 1113, 1185, 1371
MbiI CCGCTC 1 cut(s) 1386
MboI GATC 5 cut(s) 666, 796, 1111, 1183, 1369
MboII GAAGA 9 cut(s) 320, 615, 661, 674, 674, 712, 1241, 1620, 1632
MfeI CAATTG 2 cut(s) 889, 1362
MflI RGATCY 2 cut(s) 666, 1369
MhlI GDGCHC 3 cut(s) 346, 789, 961
Mly113I GGCGCC 1 cut(s) 1349
MlyI GAGTC 1 cut(s) 392
MmeI TCCRAC 4 cut(s) 786, 1034, 1688, 1772
MroXI GAANNNNTTC 3 cut(s) 419, 1251, 1627
MseI TTAA 6 cut(s) 90, 489, 840, 1055, 1128, 1224
MslI CAYNNNNRTG 3 cut(s) 120, 171, 414
MspA1I CMGCKG 1 cut(s) 1037
MspI CCGG 4 cut(s) 428, 1157, 1274, 1455
MspR9I CCNGG 8 cut(s) 1062, 1158, 1274, 1302, 1353, 1456, 1482, 1494
MunI CAATTG 2 cut(s) 889, 1362
Mva1269I GAATGC 2 cut(s) 61, 1140
MvaI CCWGG 5 cut(s) 1062, 1302, 1353, 1482, 1494
MvnI CGCG 3 cut(s) 801, 1440, 1691
MwoI GCNNNNNNNGC 3 cut(s) 613, 1096, 1348
NarI GGCGCC 1 cut(s) 1349
NciI CCSGG 3 cut(s) 1158, 1274, 1456
NdeII GATC 5 cut(s) 666, 796, 1111, 1183, 1369
NlaIII CATG 9 cut(s) 68, 119, 170, 205, 413, 611, 620, 689, 944
NlaIV GGNNCC 3 cut(s) 1350, 1382, 1601
NmuCI GTSAC 1 cut(s) 535
NspI RCATGY 3 cut(s) 205, 611, 620
PaeI GCATGC 2 cut(s) 205, 611
PceI AGGCCT 1 cut(s) 1060
PciSI GCTCTTC 1 cut(s) 687
PcsI WCGNNNNNNNCGW 1 cut(s) 1786
PctI GAATGC 2 cut(s) 61, 1140
PdmI GAANNNNTTC 3 cut(s) 419, 1251, 1627
PflMI CCANNNNNTGG 1 cut(s) 1526
PfoI TCCNGGA 1 cut(s) 1300
PkrI GCNGC 1 cut(s) 946
PleI GAGTC 1 cut(s) 391
PluTI GGCGCC 1 cut(s) 1352
PpsI GAGTC 1 cut(s) 391
PpuMI RGGWCCY 1 cut(s) 1599
PshAI GACNNNNGTC 1 cut(s) 1614
Psp5II RGGWCCY 1 cut(s) 1599
Psp6I CCWGG 5 cut(s) 1060, 1300, 1351, 1480, 1492
PspEI GGTNACC 1 cut(s) 1148
PspGI CCWGG 5 cut(s) 1060, 1300, 1351, 1480, 1492
PspN4I GGNNCC 3 cut(s) 1350, 1382, 1601
PspPI GGNCC 4 cut(s) 430, 1452, 1475, 1599
PspPPI RGGWCCY 1 cut(s) 1599
PstI CTGCAG 1 cut(s) 712
PsuI RGATCY 2 cut(s) 666, 1369
PvuII CAGCTG 1 cut(s) 1037
RsaI GTAC 1 cut(s) 445
RsaNI GTAC 1 cut(s) 444
RseI CAYNNNNRTG 3 cut(s) 120, 171, 414
SapI GCTCTTC 1 cut(s) 687
SaqAI TTAA 6 cut(s) 90, 489, 840, 1055, 1128, 1224
SatI GCNGC 1 cut(s) 945
Sau3AI GATC 5 cut(s) 666, 796, 1111, 1183, 1369
Sau96I GGNCC 4 cut(s) 430, 1452, 1475, 1599
SchI GAGTC 1 cut(s) 392
ScrFI CCNGG 8 cut(s) 1062, 1158, 1274, 1302, 1353, 1456, 1482, 1494
SduI GDGCHC 3 cut(s) 346, 789, 961
SfaNI GCATC 2 cut(s) 862, 1441
SfcI CTRYAG 1 cut(s) 708
SfoI GGCGCC 1 cut(s) 1350
SinI GGWCC 3 cut(s) 430, 1452, 1599
SmiMI CAYNNNNRTG 3 cut(s) 120, 171, 414
SmlI CTYRAG 2 cut(s) 575, 630
SmoI CTYRAG 2 cut(s) 575, 630
SphI GCATGC 2 cut(s) 205, 611
SseBI AGGCCT 1 cut(s) 1060
SsiI CCGC 6 cut(s) 59, 801, 1118, 1384, 1438, 1691
SspDI GGCGCC 1 cut(s) 1348
SspMI CTAG 6 cut(s) 498, 561, 1166, 1377, 1509, 1769
StuI AGGCCT 1 cut(s) 1060
StyD4I CCNGG 8 cut(s) 1060, 1156, 1272, 1300, 1351, 1454, 1480, 1492
StyI CCWWGG 1 cut(s) 1121
TaiI ACGT 2 cut(s) 786, 985
TaqI TCGA 5 cut(s) 51, 258, 1071, 1293, 1618
Tru1I TTAA 6 cut(s) 90, 489, 840, 1055, 1128, 1224
Tru9I TTAA 6 cut(s) 90, 489, 840, 1055, 1128, 1224
TscAI CASTG 5 cut(s) 157, 534, 599, 717, 961
TseFI GTSAC 1 cut(s) 535
TseI GCWGC 1 cut(s) 944
Tsp45I GTSAC 1 cut(s) 535
TspGWI ACGGA 2 cut(s) 754, 1099
TspRI CASTG 5 cut(s) 157, 534, 599, 717, 961
Van91I CCANNNNNTGG 1 cut(s) 1526
VpaK11BI GGWCC 3 cut(s) 430, 1452, 1599
XagI CCTNNNNNAGG 1 cut(s) 1594
XapI RAATTY 2 cut(s) 13, 1295
XbaI TCTAGA 1 cut(s) 1165
XceI RCATGY 3 cut(s) 205, 611, 620
XcmI CCANNNNNNNNNTGG 1 cut(s) 464
XmiI GTMKAC 1 cut(s) 352
XmnI GAANNNNTTC 3 cut(s) 419, 1251, 1627
XspI CTAG 6 cut(s) 498, 561, 1166, 1377, 1509, 1769
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.