Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000002

Orthogroup ID

OG0007074

Physical Location & Seq

Genomic Coordinates Forward (+)

9406342 .. 9412056

Gene Structure 5715 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_2G00087350.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1722 bp

ATGGAATCTGAGGATTTTATTGCTCTCCCGGATTCTGGTGACTCTATTGAGGAGGTGAACGACGAACTTAATAATGAGAGTGACTCTAAAGAGGTTGATGCTCAACCTACAAACTCTGAGGATAAAGAAGATAAACCAAAAAGTGAGGATCTAGGGCGGGAGAGCATTGCTCAATGTGAAGAAGGCGAATGCATACCAGAAGCAAGCCTTGCGAATGAATTGGTTGATAACGATTCAGATATGGAAATCGAGGATATAAACAACCTCTCTGCTTTGACTAGTTCTGTTCCCAAGGAGGGGGATGCTGAGAATGTAAATATTGATTTGCACTCGACATTGTATGAGAATGGTCACCTTGCAGTTCAAGATACAAGTCCCTTTGGAATCCACAATAGGGATGTCACTCCTAAAACAGGTGTAAAGAGGGCTCGAACAACAGTTGACGAGCAGCAAGCTTCTGTCCGTGTAACATATAATTCTTTAACAAGAGCTAGTAAACACAAGCTTGAAGAACTATTACAGCAGTGGTCAGAATGGCATGCCAAACATGTTTCTTCATCTCAAGATCCTACTCAAGTGTTAGAATCAGGTGAAGAGACACTCTTTCCTGCTCTTCGTTTTGGCACAGAGAGGATGTCTGGGGTGTCTTTTTGGATGGACAACCAAACAGGGACAGCACAGAACAGGGAATCGATTCCTTTGGATAGCAACTGTGCACCTCTATATGATCGTGGTTATGCCTTAGGCTTGACTTTGGCTGGTAGTTCAACTAATCAGGAGGGGGGCTTGGAGATTATAGATGATGCTAGCCGTTGTTTCAATTGTGGTTCTTACAATCATGCACTGAAGGAATGCCCCAAGCCTCGTGATCATGCTGCTGTCAATAATGCCCGCAAACAGCGCAAGATAAAAAAAAATCAAACTCCTAATTCTCGCAACTCAACTCGATATTATCAGAATTCTCCAGCTGGAAAATACGATGGTCTAAGGCCCGGTGCTCTCCATGCTGACACAAGGAAGCTTTTGGGTCTTGGGGAACTTGATCCACCTCCTTGGCTTAACAGAATGCGAGAAATTGGATACCCACCAGGATATTTAGATGTAGATGATGAGGACCAGCCATCAGGAATAATTATACACGGTGTTGAGGAAACTAAGGTTGAACAGGAGGATGGGGAAATCATTGAAACAGACCATCCTGAACCACCTGAACCACAGAGGAAAATGACGGTCGAATTTCCAGGAGTAAATGCACCAATCCCAGAAAATGCTGATGAGAGACTCTGGGCACCCGGCCCTTCATTTTCAGATCCCTCAAGGAACCGCTTGCACAACAGGTCAAACCATTATTCTGAACCTGTCAGCAGAGGCCATTATCGTGAGCAGAGGTGGTCTCGAGATTATAGAGATGATGGGCCTCCTGGCGTTGACCCAGGTTATGGGCCATCTAGTTATCCTCCGAGATATGGGAGTCATGATTACAGTTACAACTCCCGCAGTTCGAGTAATGCTTCAGCGCCTAGAAGCCCTACCACCTTTGGAAGGTCCCAAACAGACAGAGGCAGAAGAAGCAGTGAGTTTTCTTTTCCATACTCACCCACCAGGGATTCCAACCCCAAATATGATTATTTGAATGACGAAAGCAAGAATGACTATGACCCTGATAGTTCAAGTCATAGTTGGGATAGGGTAGATAGGCATCGCCATCACCGTAGGAGGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0031974 GO:0031981 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044464 GO:0070013

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

PSP zf-CCHC

Protein Analysis

573

Amino Acids

64.46

Weight (kDa)

4.96

Isoelectric Point (pI)

59.52

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PSP	PF04046	330 - 367	2.6e-11	PSP

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0007074)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G67210 AT1G67210 AT1G67210 AT5G38600 AT5G38600 AT5G38600
fragaria_vesca	FvH4_6g45480 FvH4_6g45480
malus_domestica	MD09G1082600.v1.1 MD17G1073100.v1.1
prunus_persica	Prupe.3G241000_v2.0.a1 Prupe.3G241000_v2.0.a1 Prupe.3G241000_v2.0.a1 Prupe.3G241000_v2.0.a1
pyrus_communis	pycom09g00910 pycom17g07400
rosa_chinensis	RchiOBHm_Chr2g0163421
rosa_roxburghii	Rroxscaffold_2G00087350
rosa_rugosa	Rorug02G0502500 Rorug02G0502600
rosa_samantha	Rh2AG569500 Rh2BG581600 Rh2CG551400 Rh2DG591500
rosa_wichuraiana	Rw2G047130

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	1 cut(s)	1288
AccB7I	CCANNNNNTGG	1 cut(s)	1439
AciI	CCGC	4 cut(s)	157, 892, 1324, 1495
AclWI	GGATC	4 cut(s)	156, 560, 1037, 1304
AcsI	RAATTY	2 cut(s)	958, 1235
AcuI	CTGAAG	2 cut(s)	866, 1497
AfiI	CCNNNNNNNGG	8 cut(s)	35, 296, 297, 394, 413, 1439, 1466, 1542
AflIII	ACRYGT	1 cut(s)	547
AgsI	TTSAA	8 cut(s)	365, 509, 768, 820, 1163, 1187, 1633, 1671
AhlI	ACTAGT	1 cut(s)	278
AjnI	CCWGG	5 cut(s)	1087, 1240, 1420, 1432, 1601
AluBI	AGCT	5 cut(s)	455, 491, 505, 968, 1021
AluI	AGCT	5 cut(s)	455, 491, 505, 968, 1021
Alw21I	GWGCWC	2 cut(s)	718, 1000
Alw26I	GTCTC	3 cut(s)	590, 1273, 1398
Alw44I	GTGCAC	1 cut(s)	714
AlwI	GGATC	4 cut(s)	156, 560, 1037, 1304
Ama87I	CYCGRG	1 cut(s)	1395
AoxI	GGCC	5 cut(s)	989, 1294, 1369, 1415, 1442
ApaLI	GTGCAC	1 cut(s)	714
ApeKI	GCWGC	2 cut(s)	448, 875
ApoI	RAATTY	2 cut(s)	958, 1235
Asp700I	GAANNNNTTC	1 cut(s)	693
AspLEI	GCGC	2 cut(s)	903, 1519
AspS9I	GGNCC	6 cut(s)	990, 1114, 1295, 1415, 1442, 1545
AsuC2I	CCSGG	3 cut(s)	29, 993, 1293
AsuHPI	GGTGA	6 cut(s)	50, 67, 344, 602, 1587, 1700
AsuNHI	GCTAGC	1 cut(s)	806
AvaI	CYCGRG	1 cut(s)	1395
AvaII	GGWCC	2 cut(s)	1114, 1545
AxyI	CCTNAGG	1 cut(s)	742
BaeGI	GKGCMC	2 cut(s)	718, 1291
BanI	GGYRCC	1 cut(s)	1288
BanII	GRGCYC	1 cut(s)	430
BarI	GAAGNNNNNNTAC	2 cut(s)	501, 533
BauI	CACGAG	1 cut(s)	864
Bbv12I	GWGCWC	2 cut(s)	718, 1000
BbvI	GCAGC	2 cut(s)	460, 862
BccI	CCATC	8 cut(s)	649, 974, 1129, 1166, 1203, 1406, 1453, 1713
BceAI	ACGGC	1 cut(s)	795
BciT130I	CCWGG	5 cut(s)	1089, 1242, 1422, 1434, 1603
BciVI	GTATCC	1 cut(s)	1073
BclI	TGATCA	1 cut(s)	868
BcnI	CCSGG	3 cut(s)	29, 993, 1293
BcoDI	GTCTC	3 cut(s)	590, 1273, 1398
BcuI	ACTAGT	1 cut(s)	278
BfaI	CTAG	6 cut(s)	152, 279, 492, 807, 1449, 1521
BfoI	RGCGCY	1 cut(s)	1520
BfuI	GTATCC	1 cut(s)	1073
BisI	GCNGC	2 cut(s)	449, 876
BlsI	GCNGC	2 cut(s)	450, 877
Bme1390I	CCNGG	8 cut(s)	29, 993, 1089, 1242, 1293, 1422, 1434, 1603
Bme18I	GGWCC	2 cut(s)	1114, 1545
BmeT110I	CYCGRG	1 cut(s)	1395
BmgT120I	GGNCC	6 cut(s)	990, 1114, 1295, 1415, 1442, 1545
BmiI	GGNNCC	3 cut(s)	1290, 1322, 1547
BmrFI	CCNGG	8 cut(s)	29, 993, 1089, 1242, 1293, 1422, 1434, 1603
BmsI	GCATC	4 cut(s)	88, 292, 793, 1708
BmtI	GCTAGC	1 cut(s)	810
BplI	GAGNNNNNCTC	6 cut(s)	68, 100, 154, 186, 1378, 1410
BpmI	CTGGAG	1 cut(s)	948
BpuEI	CTTGAG	3 cut(s)	546, 558, 1300
BpuMI	CCSGG	3 cut(s)	29, 993, 1293
Bsa29I	ATCGAT	1 cut(s)	692
BsaBI	GATNNNNATC	1 cut(s)	1698
BsaI	GGTCTC	1 cut(s)	1398
BsaJI	CCNNGG	4 cut(s)	291, 1052, 1432, 1602
Bsc4I	CCNNNNNNNGG	8 cut(s)	35, 296, 297, 394, 413, 1439, 1466, 1542
Bse21I	CCTNAGG	1 cut(s)	742
Bse3DI	GCAATG	1 cut(s)	165
Bse8I	GATNNNNATC	1 cut(s)	1698
BseBI	CCWGG	5 cut(s)	1089, 1242, 1422, 1434, 1603
BseCI	ATCGAT	1 cut(s)	692
BseDI	CCNNGG	4 cut(s)	291, 1052, 1432, 1602
BseGI	GGATG	6 cut(s)	307, 403, 639, 660, 1177, 1195
BseJI	GATNNNNATC	1 cut(s)	1698
BseLI	CCNNNNNNNGG	8 cut(s)	35, 296, 297, 394, 413, 1439, 1466, 1542
BseMI	GCAATG	1 cut(s)	165
BseMII	CTCAG	2 cut(s)	108, 297
BseRI	GAGGAG	1 cut(s)	65
BseSI	GKGCMC	2 cut(s)	718, 1291
BseXI	GCAGC	2 cut(s)	460, 862
Bsh1285I	CGRYCG	1 cut(s)	1233
BshFI	GGCC	5 cut(s)	991, 1296, 1371, 1417, 1444
BshNI	GGYRCC	1 cut(s)	1288
BshVI	ATCGAT	1 cut(s)	692
BsiEI	CGRYCG	1 cut(s)	1233
BsiHKAI	GWGCWC	2 cut(s)	718, 1000
BsiHKCI	CYCGRG	1 cut(s)	1395
BsiSI	CCGG	3 cut(s)	29, 993, 1293
BslFI	GGGAC	3 cut(s)	360, 685, 1531
BslI	CCNNNNNNNGG	8 cut(s)	35, 296, 297, 394, 413, 1439, 1466, 1542
BsmAI	GTCTC	3 cut(s)	590, 1273, 1398
BsmFI	GGGAC	3 cut(s)	360, 685, 1531
BsmI	GAATGC	3 cut(s)	194, 857, 1071
BsnI	GGCC	5 cut(s)	991, 1296, 1371, 1417, 1444
Bso31I	GGTCTC	1 cut(s)	1398
BsoBI	CYCGRG	1 cut(s)	1395
Bsp1286I	GDGCHC	4 cut(s)	430, 718, 1000, 1291
Bsp143I	GATC	6 cut(s)	148, 565, 727, 868, 1042, 1309
BspACI	CCGC	4 cut(s)	157, 892, 1324, 1495
BspANI	GGCC	5 cut(s)	991, 1296, 1371, 1417, 1444
BspCNI	CTCAG	2 cut(s)	109, 298
BspDI	ATCGAT	1 cut(s)	692
BspHI	TCATGA	1 cut(s)	1474
BspLI	GGNNCC	3 cut(s)	1290, 1322, 1547
BspOI	GCTAGC	1 cut(s)	810
BspPI	GGATC	4 cut(s)	156, 560, 1037, 1304
BspQI	GCTCTTC	1 cut(s)	618
BspT107I	GGYRCC	1 cut(s)	1288
BspTNI	GGTCTC	1 cut(s)	1398
BsrDI	GCAATG	1 cut(s)	165
BssECI	CCNNGG	4 cut(s)	291, 1052, 1432, 1602
BssMI	GATC	6 cut(s)	148, 565, 727, 868, 1042, 1309
BssSI	CACGAG	1 cut(s)	864
BssT1I	CCWWGG	2 cut(s)	291, 1052
Bst2BI	CACGAG	1 cut(s)	864
Bst2UI	CCWGG	5 cut(s)	1089, 1242, 1422, 1434, 1603
Bst4CI	ACNGT	6 cut(s)	439, 713, 1142, 1231, 1484, 1712
Bst6I	CTCTTC	2 cut(s)	588, 618
BstAPI	GCANNNNNTGC	1 cut(s)	209
BstC8I	GCNNGC	6 cut(s)	205, 453, 540, 808, 892, 1328
BstDEI	CTNAG	6 cut(s)	9, 117, 306, 742, 986, 1155
BstEII	GGTNACC	1 cut(s)	350
BstENI	CCTNNNNNAGG	2 cut(s)	411, 1540
BstF5I	GGATG	6 cut(s)	307, 403, 639, 660, 1177, 1195
BstH2I	RGCGCY	1 cut(s)	1520
BstHHI	GCGC	2 cut(s)	903, 1519
BstKTI	GATC	6 cut(s)	151, 568, 730, 871, 1045, 1312
BstMAI	GTCTC	3 cut(s)	590, 1273, 1398
BstMBI	GATC	6 cut(s)	148, 565, 727, 868, 1042, 1309
BstMCI	CGRYCG	1 cut(s)	1233
BstMWI	GCNNNNNNNGC	4 cut(s)	209, 900, 1004, 1569
BstNI	CCWGG	5 cut(s)	1089, 1242, 1422, 1434, 1603
BstNSI	RCATGY	2 cut(s)	542, 551
BstPI	GGTNACC	1 cut(s)	350
BstSCI	CCNGG	8 cut(s)	27, 991, 1087, 1240, 1291, 1420, 1432, 1601
BstSLI	GKGCMC	2 cut(s)	718, 1291
BstV1I	GCAGC	2 cut(s)	460, 862
BstX2I	RGATCY	3 cut(s)	148, 565, 1309
BstXI	CCANNNNNNTGG	1 cut(s)	1053
BstYI	RGATCY	3 cut(s)	148, 565, 1309
Bsu15I	ATCGAT	1 cut(s)	692
Bsu36I	CCTNAGG	1 cut(s)	742
BsuI	GTATCC	1 cut(s)	1073
BsuRI	GGCC	5 cut(s)	991, 1296, 1371, 1417, 1444
BsuTUI	ATCGAT	1 cut(s)	692
BtgZI	GCGATG	1 cut(s)	1685
BtsCI	GGATG	6 cut(s)	307, 403, 639, 660, 1177, 1195
BtsI	GCAGTG	2 cut(s)	530, 1579
BtsIMutI	CAGTG	3 cut(s)	530, 842, 1579
Cac8I	GCNNGC	6 cut(s)	205, 453, 540, 808, 892, 1328
CciI	TCATGA	1 cut(s)	1474
CfoI	GCGC	2 cut(s)	903, 1519
Cfr13I	GGNCC	6 cut(s)	990, 1114, 1295, 1415, 1442, 1545
ClaI	ATCGAT	1 cut(s)	692
CviAII	CATG	6 cut(s)	539, 548, 839, 872, 1004, 1475
DdeI	CTNAG	6 cut(s)	9, 117, 306, 742, 986, 1155
DpnI	GATC	6 cut(s)	150, 567, 729, 870, 1044, 1311
DpnII	GATC	6 cut(s)	148, 565, 727, 868, 1042, 1309
Eam1104I	CTCTTC	2 cut(s)	588, 618
EarI	CTCTTC	2 cut(s)	588, 618
Eco130I	CCWWGG	2 cut(s)	291, 1052
Eco24I	GRGCYC	1 cut(s)	430
Eco31I	GGTCTC	1 cut(s)	1398
Eco47I	GGWCC	2 cut(s)	1114, 1545
Eco57I	CTGAAG	2 cut(s)	866, 1497
Eco81I	CCTNAGG	1 cut(s)	742
Eco88I	CYCGRG	1 cut(s)	1395
Eco91I	GGTNACC	1 cut(s)	350
EcoNI	CCTNNNNNAGG	2 cut(s)	411, 1540
EcoO109I	RGGNCCY	1 cut(s)	1545
EcoO65I	GGTNACC	1 cut(s)	350
EcoRI	GAATTC	1 cut(s)	958
EcoRII	CCWGG	5 cut(s)	1087, 1240, 1420, 1432, 1601
EcoT14I	CCWWGG	2 cut(s)	291, 1052
EcoT22I	ATGCAT	1 cut(s)	194
EcoT38I	GRGCYC	1 cut(s)	430
ErhI	CCWWGG	2 cut(s)	291, 1052
FaeI	CATG	6 cut(s)	542, 551, 842, 875, 1007, 1478
FalI	AAGNNNNNCTT	2 cut(s)	192, 224
FaqI	GGGAC	3 cut(s)	360, 685, 1531
FatI	CATG	6 cut(s)	538, 547, 838, 871, 1003, 1474
FauI	CCCGC	3 cut(s)	150, 899, 1502
FbaI	TGATCA	1 cut(s)	868
Fnu4HI	GCNGC	2 cut(s)	449, 876
FokI	GGATG	6 cut(s)	314, 410, 646, 667, 1182, 1184
FriOI	GRGCYC	1 cut(s)	430
Fsp4HI	GCNGC	2 cut(s)	449, 876
FspBI	CTAG	6 cut(s)	152, 279, 492, 807, 1449, 1521
GlaI	GCGC	2 cut(s)	902, 1518
GluI	GCNGC	2 cut(s)	449, 876
GsuI	CTGGAG	1 cut(s)	948
HaeII	RGCGCY	1 cut(s)	1520
HaeIII	GGCC	5 cut(s)	991, 1296, 1371, 1417, 1444
HapII	CCGG	3 cut(s)	29, 993, 1293
HhaI	GCGC	2 cut(s)	903, 1519
Hin1II	CATG	6 cut(s)	542, 551, 842, 875, 1007, 1478
Hin6I	GCGC	2 cut(s)	901, 1517
HinP1I	GCGC	2 cut(s)	901, 1517
HincII	GTYRAC	2 cut(s)	442, 1429
HindII	GTYRAC	2 cut(s)	442, 1429
HindIII	AAGCTT	3 cut(s)	453, 503, 1019
HpaII	CCGG	3 cut(s)	29, 993, 1293
HphI	GGTGA	6 cut(s)	50, 67, 344, 602, 1587, 1700
Hpy166II	GTNNAC	5 cut(s)	58, 442, 497, 716, 1429
Hpy188I	TCNGA	8 cut(s)	10, 118, 238, 532, 957, 1309, 1354, 1461
Hpy8I	GTNNAC	5 cut(s)	58, 442, 497, 716, 1429
Hpy99I	CGWCG	1 cut(s)	65
HpyAV	CCTTC	4 cut(s)	176, 841, 1308, 1536
HpyCH4III	ACNGT	6 cut(s)	439, 713, 1142, 1231, 1484, 1712
HpyCH4V	TGCA	7 cut(s)	192, 328, 359, 716, 842, 1253, 1330
HpyF10VI	GCNNNNNNNGC	4 cut(s)	209, 900, 1004, 1569
HpyF3I	CTNAG	6 cut(s)	9, 117, 306, 742, 986, 1155
Hsp92II	CATG	6 cut(s)	542, 551, 842, 875, 1007, 1478
HspAI	GCGC	2 cut(s)	901, 1517
Ksp22I	TGATCA	1 cut(s)	868
Kzo9I	GATC	6 cut(s)	148, 565, 727, 868, 1042, 1309
LguI	GCTCTTC	1 cut(s)	618
Lsp1109I	GCAGC	2 cut(s)	460, 862
LweI	GCATC	4 cut(s)	88, 292, 793, 1708
MaeI	CTAG	6 cut(s)	152, 279, 492, 807, 1449, 1521
MaeIII	GTNAC	6 cut(s)	38, 80, 350, 400, 466, 1484
MalI	GATC	6 cut(s)	150, 567, 729, 870, 1044, 1311
MboI	GATC	6 cut(s)	148, 565, 727, 868, 1042, 1309
MboII	GAAGA	7 cut(s)	140, 191, 521, 546, 605, 605, 1578
MfeI	CAATTG	1 cut(s)	820
MflI	RGATCY	3 cut(s)	148, 565, 1309
MhlI	GDGCHC	4 cut(s)	430, 718, 1000, 1291
MluCI	AATT	8 cut(s)	218, 475, 820, 928, 958, 1074, 1131, 1235
MlyI	GAGTC	4 cut(s)	35, 77, 1275, 1480
MmeI	TCCRAC	1 cut(s)	1635
Mph1103I	ATGCAT	1 cut(s)	194
MroXI	GAANNNNTTC	1 cut(s)	693
MseI	TTAA	3 cut(s)	69, 482, 1059
MslI	CAYNNNNRTG	1 cut(s)	1377
MspA1I	CMGCKG	1 cut(s)	968
MspI	CCGG	3 cut(s)	29, 993, 1293
MspR9I	CCNGG	8 cut(s)	29, 993, 1089, 1242, 1293, 1422, 1434, 1603
MunI	CAATTG	1 cut(s)	820
Mva1269I	GAATGC	3 cut(s)	194, 857, 1071
MvaI	CCWGG	5 cut(s)	1089, 1242, 1422, 1434, 1603
MwoI	GCNNNNNNNGC	4 cut(s)	209, 900, 1004, 1569
NciI	CCSGG	3 cut(s)	29, 993, 1293
NdeII	GATC	6 cut(s)	148, 565, 727, 868, 1042, 1309
NheI	GCTAGC	1 cut(s)	806
NlaIII	CATG	6 cut(s)	542, 551, 842, 875, 1007, 1478
NlaIV	GGNNCC	3 cut(s)	1290, 1322, 1547
NmuCI	GTSAC	4 cut(s)	38, 80, 350, 400
NsiI	ATGCAT	1 cut(s)	194
NspI	RCATGY	2 cut(s)	542, 551
PaeI	GCATGC	1 cut(s)	542
PaeR7I	CTCGAG	1 cut(s)	1395
PagI	TCATGA	1 cut(s)	1474
PciI	ACATGT	1 cut(s)	547
PciSI	GCTCTTC	1 cut(s)	618
PcsI	WCGNNNNNNNCGW	1 cut(s)	1708
PctI	GAATGC	3 cut(s)	194, 857, 1071
PdmI	GAANNNNTTC	1 cut(s)	693
PfeI	GAWTC	8 cut(s)	5, 32, 233, 384, 584, 689, 694, 1607
PflMI	CCANNNNNTGG	1 cut(s)	1439
PfoI	TCCNGGA	2 cut(s)	27, 1240
PkrI	GCNGC	2 cut(s)	450, 877
PleI	GAGTC	4 cut(s)	35, 77, 1275, 1479
PpsI	GAGTC	4 cut(s)	35, 77, 1275, 1479
PpuMI	RGGWCCY	1 cut(s)	1545
PscI	ACATGT	1 cut(s)	547
Psp5II	RGGWCCY	1 cut(s)	1545
Psp6I	CCWGG	5 cut(s)	1087, 1240, 1420, 1432, 1601
PspEI	GGTNACC	1 cut(s)	350
PspGI	CCWGG	5 cut(s)	1087, 1240, 1420, 1432, 1601
PspN4I	GGNNCC	3 cut(s)	1290, 1322, 1547
PspPI	GGNCC	6 cut(s)	990, 1114, 1295, 1415, 1442, 1545
PspPPI	RGGWCCY	1 cut(s)	1545
PsuI	RGATCY	3 cut(s)	148, 565, 1309
PvuII	CAGCTG	1 cut(s)	968
RseI	CAYNNNNRTG	1 cut(s)	1377
SapI	GCTCTTC	1 cut(s)	618
SaqAI	TTAA	3 cut(s)	69, 482, 1059
SatI	GCNGC	2 cut(s)	449, 876
Sau3AI	GATC	6 cut(s)	148, 565, 727, 868, 1042, 1309
Sau96I	GGNCC	6 cut(s)	990, 1114, 1295, 1415, 1442, 1545
SchI	GAGTC	4 cut(s)	35, 77, 1275, 1480
ScrFI	CCNGG	8 cut(s)	29, 993, 1089, 1242, 1293, 1422, 1434, 1603
SduI	GDGCHC	4 cut(s)	430, 718, 1000, 1291
SfaNI	GCATC	4 cut(s)	88, 292, 793, 1708
Sfr274I	CTCGAG	1 cut(s)	1395
SinI	GGWCC	2 cut(s)	1114, 1545
SlaI	CTCGAG	1 cut(s)	1395
SmiMI	CAYNNNNRTG	1 cut(s)	1377
SmlI	CTYRAG	4 cut(s)	561, 573, 1315, 1395
SmoI	CTYRAG	4 cut(s)	561, 573, 1315, 1395
SpeI	ACTAGT	1 cut(s)	278
SphI	GCATGC	1 cut(s)	542
Sse9I	AATT	8 cut(s)	218, 475, 820, 928, 958, 1074, 1131, 1235
SsiI	CCGC	4 cut(s)	157, 892, 1324, 1495
SspI	AATATT	1 cut(s)	319
SspMI	CTAG	6 cut(s)	152, 279, 492, 807, 1449, 1521
StyD4I	CCNGG	8 cut(s)	27, 991, 1087, 1240, 1291, 1420, 1432, 1601
StyI	CCWWGG	2 cut(s)	291, 1052
TaaI	ACNGT	6 cut(s)	439, 713, 1142, 1231, 1484, 1712
TaqI	TCGA	8 cut(s)	249, 332, 430, 692, 946, 1233, 1396, 1502
TasI	AATT	8 cut(s)	218, 475, 820, 928, 958, 1074, 1131, 1235
TfiI	GAWTC	8 cut(s)	5, 32, 233, 384, 584, 689, 694, 1607
Tru1I	TTAA	3 cut(s)	69, 482, 1059
Tru9I	TTAA	3 cut(s)	69, 482, 1059
TscAI	CASTG	3 cut(s)	530, 849, 1579
TseFI	GTSAC	4 cut(s)	38, 80, 350, 400
TseI	GCWGC	2 cut(s)	448, 875
Tsp45I	GTSAC	4 cut(s)	38, 80, 350, 400
TspDTI	ATGAA	3 cut(s)	231, 546, 1290
TspGWI	ACGGA	1 cut(s)	452
TspRI	CASTG	3 cut(s)	530, 849, 1579
Van91I	CCANNNNNTGG	1 cut(s)	1439
VneI	GTGCAC	1 cut(s)	714
VpaK11BI	GGWCC	2 cut(s)	1114, 1545
XagI	CCTNNNNNAGG	2 cut(s)	411, 1540
XapI	RAATTY	2 cut(s)	958, 1235
XceI	RCATGY	2 cut(s)	542, 551
XhoI	CTCGAG	1 cut(s)	1395
XmnI	GAANNNNTTC	1 cut(s)	693
XspI	CTAG	6 cut(s)	152, 279, 492, 807, 1449, 1521
Zsp2I	ATGCAT	1 cut(s)	194

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.