RchiOBHm_Chr2g0163421

proline-rich domain in spliceosome associated proteins

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
2
OG0007074
Physical Location & Seq
Reverse (-)
78929336 .. 78935137
5802 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ53159

Sequence Viewer

Length: 1719 bp
ATGGAATCTGAGGATTTTATTGCTCTCCCGGATTCTGGTGACTCTATTGAGGAGGTGAACGACGAACTTAATAATGAGAGTGACTCTAAAGAGGTTGATGCTCAACCTACAAACTCTGAGGATAAAGAAGATAAACCAAACAGTGAAGATCTAGGGCGGGAGAGCATTGCTCAATGTGAAGAAGGCGAATGCATACCAGAAGCAAGCCTTGCGAATGAATTGGTTGATAACGATTCAGATATGGAAATCGAGGATATAAACAACCTCCCTGATTTGACTAGTTCTGTTCCCAAGGAGGGGGATGTTGAGAATGTAAATATTGATTTGCACTCGACATCGTATGAGAATGGTCACCTTGTAGTTCAAGATACAAGTCCCTTTGGAATCCACAATACGGATGTCACTCCTAAAACAGGTGTAAAGAGGGCTCGAACAACAGTTGACGAGCACCAAGCTTCTGTCCGTGTAACATATAATTCTTTAACAAGAGCTGGTAAACACAAGCTTGAAGAACTATTACAGCAGTGGTCAGAATGGCATGCCAAACATGTTTCTTCCTCTCAAGATCCTACTCAAGTGTTAGAATCAGGTGAAGAGACACTCTTTCCTGCTCTTCGTTTTGGCACAGAGAGGACGTCTGGGGTGTCTTTTTGGATGGACAACCAAACAGGGACAGCACAGAACAGGGAATCGATTCCTTTGGATAGCAACTATGCGCCTCTATATGATCGTGGTTATGCCTTAGGCTTGACTTTGACTGGTAGTTCAACTAATCAGGAGGGGGGCTTGGAGATTATAGATGATGCTAGCCGTTGTTTCAATTGTGGTTCTTACAATCATGCGTTGAAGGAATGCCCCAAGCCTCGTGACCATGTAGCTGTCAATAATGCCCGCAAACAGCGGAAGATAAAAAAAAATCAAACTCCTAATTCTCGCAACTCAACTCGATATTATCAGAGTTCTCCAGCTGGAAAATACGATGGTTTAAGGCCCGGTGCTCTCCATGCTGACACAAGGAAGCTTTTGGGTCTTGGGGAACTTGATCCACCTCCTTGGCTTAACAGAATGCGAGAAATTGGATACCCACCAGGATATTTAGATGTAGATGATGAGGACCAGCCATCAGGAATAATTATACACGGTGGTGAGGAAACTAAGGTTGAACAGGAGGATGGGGAAATCATCGAAACAGACCATCCTGAACCACCTGAACCACAGAGGAAAATGACAGTCGACTTTCCAGGAGTAAATGCACCAATCCCAGAAAATGCTGATGAGAGACTCTGGGCACCCGGGCCTTCATTTTCAGATCCCTCAAGGAACCGCTCGCACAACAGGCCAAACCATTATTCTGAACCTGTCAGCAGAGGCCATTATCGTGAGCAGAGGTGGTCTCGAGATTATAGAGATGATGGGCCTCCTGGCGTTGACCCAGGTTATGGGCCATCTAGTTATCCTCCAAGATATGGGAGTCATGATTACAGTTACAACTCCCGCAGTTCGAGTAATGCTTCAGCGCCTAGAAGCCCTACCTTTGGAAGGTCCCAAACAGACAGAGGCAGAAGAAGCAGTGAGTTTTCTTTTCCATACTCACCCACCAGGGATTCCAACCCCAAATATGATTATTTGAATGACGAAAGCAAGAATGACTATGACCCTGATAGTTCAAGTCATAGTTGGGATAGGGTAGATAGGCATCGCCATCACCGTAGGAGGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0031974 GO:0031981 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044464 GO:0070013
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
PSP zf-CCHC

Protein Analysis

572

Amino Acids

64.34

Weight (kDa)

4.9

Isoelectric Point (pI)

59.39

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PSP PF04046 330 - 367 3.7e-11 PSP
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 638
AccB1I GGYRCC 1 cut(s) 1288
AccB7I CCANNNNNTGG 2 cut(s) 1439, 1466
AccBSI CCGCTC 1 cut(s) 1326
AccI GTMKAC 1 cut(s) 1233
AciI CCGC 5 cut(s) 157, 892, 901, 1324, 1495
AclWI GGATC 3 cut(s) 560, 1037, 1304
AcuI CTGAAG 1 cut(s) 1497
AcyI GRCGYC 1 cut(s) 635
AfiI CCNNNNNNNGG 9 cut(s) 35, 296, 297, 394, 413, 1439, 1466, 1535, 1539
AflIII ACRYGT 1 cut(s) 547
AgsI TTSAA 8 cut(s) 365, 509, 768, 820, 847, 1163, 1630, 1668
AhlI ACTAGT 1 cut(s) 278
AjnI CCWGG 5 cut(s) 1087, 1240, 1420, 1432, 1598
AjuI GAANNNNNNNTTGG 2 cut(s) 1333, 1365
AleI CACNNNNGTG 1 cut(s) 1143
AluBI AGCT 6 cut(s) 455, 491, 505, 878, 968, 1021
AluI AGCT 6 cut(s) 455, 491, 505, 878, 968, 1021
Alw21I GWGCWC 2 cut(s) 450, 1000
Alw26I GTCTC 3 cut(s) 590, 1273, 1398
AlwI GGATC 3 cut(s) 560, 1037, 1304
Ama87I CYCGRG 2 cut(s) 1292, 1395
AoxI GGCC 6 cut(s) 989, 1295, 1337, 1369, 1415, 1442
Asp700I GAANNNNTTC 1 cut(s) 693
AspLEI GCGC 2 cut(s) 718, 1519
AspS9I GGNCC 6 cut(s) 990, 1114, 1295, 1415, 1442, 1542
AsuC2I CCSGG 4 cut(s) 29, 993, 1293, 1294
AsuHPI GGTGA 7 cut(s) 50, 67, 344, 602, 1157, 1584, 1697
AsuNHI GCTAGC 1 cut(s) 806
AvaI CYCGRG 2 cut(s) 1292, 1395
AvaII GGWCC 2 cut(s) 1114, 1542
AxyI CCTNAGG 1 cut(s) 742
BaeGI GKGCMC 1 cut(s) 1291
BanI GGYRCC 1 cut(s) 1288
BanII GRGCYC 1 cut(s) 430
BarI GAAGNNNNNNTAC 2 cut(s) 501, 533
BauI CACGAG 1 cut(s) 864
Bbv12I GWGCWC 2 cut(s) 450, 1000
BccI CCATC 8 cut(s) 649, 974, 1129, 1166, 1203, 1406, 1453, 1710
BceAI ACGGC 1 cut(s) 795
BciT130I CCWGG 5 cut(s) 1089, 1242, 1422, 1434, 1600
BciVI GTATCC 1 cut(s) 1073
BcnI CCSGG 4 cut(s) 29, 993, 1293, 1294
BcoDI GTCTC 3 cut(s) 590, 1273, 1398
BcuI ACTAGT 1 cut(s) 278
BfaI CTAG 5 cut(s) 152, 279, 807, 1449, 1521
BfoI RGCGCY 1 cut(s) 1520
BfuI GTATCC 1 cut(s) 1073
BglII AGATCT 1 cut(s) 148
Bme1390I CCNGG 9 cut(s) 29, 993, 1089, 1242, 1293, 1294, 1422, 1434, 1600
Bme18I GGWCC 2 cut(s) 1114, 1542
BmeT110I CYCGRG 2 cut(s) 1292, 1395
BmgT120I GGNCC 6 cut(s) 990, 1114, 1295, 1415, 1442, 1542
BmiI GGNNCC 3 cut(s) 1290, 1322, 1544
BmrFI CCNGG 9 cut(s) 29, 993, 1089, 1242, 1293, 1294, 1422, 1434, 1600
BmsI GCATC 3 cut(s) 88, 793, 1705
BmtI GCTAGC 1 cut(s) 810
BplI GAGNNNNNCTC 6 cut(s) 68, 100, 154, 186, 1378, 1410
BpmI CTGGAG 1 cut(s) 948
BpuEI CTTGAG 3 cut(s) 546, 558, 1300
BpuMI CCSGG 4 cut(s) 29, 993, 1293, 1294
Bsa29I ATCGAT 1 cut(s) 692
BsaBI GATNNNNATC 1 cut(s) 1695
BsaHI GRCGYC 1 cut(s) 635
BsaI GGTCTC 1 cut(s) 1398
BsaJI CCNNGG 5 cut(s) 291, 1052, 1292, 1432, 1599
Bsc4I CCNNNNNNNGG 9 cut(s) 35, 296, 297, 394, 413, 1439, 1466, 1535, 1539
Bse1I ACTGG 1 cut(s) 763
Bse21I CCTNAGG 1 cut(s) 742
Bse3DI GCAATG 1 cut(s) 165
Bse8I GATNNNNATC 1 cut(s) 1695
BseBI CCWGG 5 cut(s) 1089, 1242, 1422, 1434, 1600
BseCI ATCGAT 1 cut(s) 692
BseDI CCNNGG 5 cut(s) 291, 1052, 1292, 1432, 1599
BseGI GGATG 5 cut(s) 307, 403, 660, 1177, 1195
BseJI GATNNNNATC 1 cut(s) 1695
BseLI CCNNNNNNNGG 9 cut(s) 35, 296, 297, 394, 413, 1439, 1466, 1535, 1539
BseMI GCAATG 1 cut(s) 165
BseMII CTCAG 1 cut(s) 108
BseNI ACTGG 1 cut(s) 763
BseRI GAGGAG 1 cut(s) 65
BseSI GKGCMC 1 cut(s) 1291
BshFI GGCC 6 cut(s) 991, 1297, 1339, 1371, 1417, 1444
BshNI GGYRCC 1 cut(s) 1288
BshVI ATCGAT 1 cut(s) 692
BsiHKAI GWGCWC 2 cut(s) 450, 1000
BsiHKCI CYCGRG 2 cut(s) 1292, 1395
BsiSI CCGG 3 cut(s) 29, 993, 1293
BslFI GGGAC 3 cut(s) 360, 685, 1528
BslI CCNNNNNNNGG 9 cut(s) 35, 296, 297, 394, 413, 1439, 1466, 1535, 1539
BsmAI GTCTC 3 cut(s) 590, 1273, 1398
BsmFI GGGAC 3 cut(s) 360, 685, 1528
BsmI GAATGC 3 cut(s) 194, 857, 1071
BsnI GGCC 6 cut(s) 991, 1297, 1339, 1371, 1417, 1444
Bso31I GGTCTC 1 cut(s) 1398
BsoBI CYCGRG 2 cut(s) 1292, 1395
Bsp1286I GDGCHC 4 cut(s) 430, 450, 1000, 1291
Bsp143I GATC 5 cut(s) 148, 565, 727, 1042, 1309
BspACI CCGC 5 cut(s) 157, 892, 901, 1324, 1495
BspANI GGCC 6 cut(s) 991, 1297, 1339, 1371, 1417, 1444
BspCNI CTCAG 1 cut(s) 109
BspDI ATCGAT 1 cut(s) 692
BspHI TCATGA 1 cut(s) 1474
BspLI GGNNCC 3 cut(s) 1290, 1322, 1544
BspOI GCTAGC 1 cut(s) 810
BspPI GGATC 3 cut(s) 560, 1037, 1304
BspQI GCTCTTC 1 cut(s) 618
BspT107I GGYRCC 1 cut(s) 1288
BspTNI GGTCTC 1 cut(s) 1398
BsrBI CCGCTC 1 cut(s) 1326
BsrDI GCAATG 1 cut(s) 165
BsrI ACTGG 1 cut(s) 763
BssECI CCNNGG 5 cut(s) 291, 1052, 1292, 1432, 1599
BssMI GATC 5 cut(s) 148, 565, 727, 1042, 1309
BssNI GRCGYC 1 cut(s) 635
BssSI CACGAG 1 cut(s) 864
BssT1I CCWWGG 2 cut(s) 291, 1052
Bst2BI CACGAG 1 cut(s) 864
Bst2UI CCWGG 5 cut(s) 1089, 1242, 1422, 1434, 1600
Bst4CI ACNGT 6 cut(s) 143, 439, 1142, 1231, 1484, 1709
Bst6I CTCTTC 2 cut(s) 588, 618
BstACI GRCGYC 1 cut(s) 635
BstAPI GCANNNNNTGC 1 cut(s) 209
BstC8I GCNNGC 5 cut(s) 205, 540, 808, 892, 1328
BstDEI CTNAG 4 cut(s) 9, 117, 742, 1155
BstEII GGTNACC 1 cut(s) 350
BstENI CCTNNNNNAGG 2 cut(s) 411, 1537
BstF5I GGATG 5 cut(s) 307, 403, 660, 1177, 1195
BstH2I RGCGCY 1 cut(s) 1520
BstHHI GCGC 2 cut(s) 718, 1519
BstKTI GATC 5 cut(s) 151, 568, 730, 1045, 1312
BstMAI GTCTC 3 cut(s) 590, 1273, 1398
BstMBI GATC 5 cut(s) 148, 565, 727, 1042, 1309
BstMWI GCNNNNNNNGC 4 cut(s) 209, 1004, 1336, 1566
BstNI CCWGG 5 cut(s) 1089, 1242, 1422, 1434, 1600
BstNSI RCATGY 2 cut(s) 542, 551
BstPI GGTNACC 1 cut(s) 350
BstSCI CCNGG 9 cut(s) 27, 991, 1087, 1240, 1291, 1292, 1420, 1432, 1598
BstSLI GKGCMC 1 cut(s) 1291
BstX2I RGATCY 3 cut(s) 148, 565, 1309
BstXI CCANNNNNNTGG 1 cut(s) 1053
BstYI RGATCY 3 cut(s) 148, 565, 1309
Bsu15I ATCGAT 1 cut(s) 692
Bsu36I CCTNAGG 1 cut(s) 742
BsuI GTATCC 1 cut(s) 1073
BsuRI GGCC 6 cut(s) 991, 1297, 1339, 1371, 1417, 1444
BsuTUI ATCGAT 1 cut(s) 692
BtgZI GCGATG 1 cut(s) 1682
BtsCI GGATG 5 cut(s) 307, 403, 660, 1177, 1195
BtsI GCAGTG 2 cut(s) 530, 1576
BtsIMutI CAGTG 3 cut(s) 148, 530, 1576
Cac8I GCNNGC 5 cut(s) 205, 540, 808, 892, 1328
CciI TCATGA 1 cut(s) 1474
CfoI GCGC 2 cut(s) 718, 1519
Cfr13I GGNCC 6 cut(s) 990, 1114, 1295, 1415, 1442, 1542
Cfr9I CCCGGG 1 cut(s) 1292
ClaI ATCGAT 1 cut(s) 692
CviAII CATG 6 cut(s) 539, 548, 839, 872, 1004, 1475
DdeI CTNAG 4 cut(s) 9, 117, 742, 1155
DpnI GATC 5 cut(s) 150, 567, 729, 1044, 1311
DpnII GATC 5 cut(s) 148, 565, 727, 1042, 1309
Eam1104I CTCTTC 2 cut(s) 588, 618
EarI CTCTTC 2 cut(s) 588, 618
Eco130I CCWWGG 2 cut(s) 291, 1052
Eco24I GRGCYC 1 cut(s) 430
Eco31I GGTCTC 1 cut(s) 1398
Eco47I GGWCC 2 cut(s) 1114, 1542
Eco57I CTGAAG 1 cut(s) 1497
Eco81I CCTNAGG 1 cut(s) 742
Eco88I CYCGRG 2 cut(s) 1292, 1395
Eco91I GGTNACC 1 cut(s) 350
EcoNI CCTNNNNNAGG 2 cut(s) 411, 1537
EcoO109I RGGNCCY 1 cut(s) 1542
EcoO65I GGTNACC 1 cut(s) 350
EcoRII CCWGG 5 cut(s) 1087, 1240, 1420, 1432, 1598
EcoT14I CCWWGG 2 cut(s) 291, 1052
EcoT22I ATGCAT 1 cut(s) 194
EcoT38I GRGCYC 1 cut(s) 430
ErhI CCWWGG 2 cut(s) 291, 1052
FaeI CATG 6 cut(s) 542, 551, 842, 875, 1007, 1478
FalI AAGNNNNNCTT 2 cut(s) 192, 224
FaqI GGGAC 3 cut(s) 360, 685, 1528
FatI CATG 6 cut(s) 538, 547, 838, 871, 1003, 1474
FauI CCCGC 3 cut(s) 150, 899, 1502
FblI GTMKAC 1 cut(s) 1233
FokI GGATG 5 cut(s) 314, 410, 667, 1182, 1184
FriOI GRGCYC 1 cut(s) 430
FspBI CTAG 5 cut(s) 152, 279, 807, 1449, 1521
GlaI GCGC 2 cut(s) 717, 1518
GsuI CTGGAG 1 cut(s) 948
HaeII RGCGCY 1 cut(s) 1520
HaeIII GGCC 6 cut(s) 991, 1297, 1339, 1371, 1417, 1444
HapII CCGG 3 cut(s) 29, 993, 1293
HhaI GCGC 2 cut(s) 718, 1519
Hin1I GRCGYC 1 cut(s) 635
Hin1II CATG 6 cut(s) 542, 551, 842, 875, 1007, 1478
Hin6I GCGC 2 cut(s) 716, 1517
HinP1I GCGC 2 cut(s) 716, 1517
HincII GTYRAC 3 cut(s) 442, 1234, 1429
HindII GTYRAC 3 cut(s) 442, 1234, 1429
HindIII AAGCTT 3 cut(s) 453, 503, 1019
HpaII CCGG 3 cut(s) 29, 993, 1293
HphI GGTGA 7 cut(s) 50, 67, 344, 602, 1157, 1584, 1697
Hpy166II GTNNAC 5 cut(s) 58, 442, 497, 1234, 1429
Hpy188I TCNGA 7 cut(s) 10, 118, 238, 532, 957, 1309, 1354
Hpy8I GTNNAC 5 cut(s) 58, 442, 497, 1234, 1429
Hpy99I CGWCG 1 cut(s) 65
HpyAV CCTTC 4 cut(s) 176, 841, 1308, 1533
HpyCH4III ACNGT 6 cut(s) 143, 439, 1142, 1231, 1484, 1709
HpyCH4IV ACGT 1 cut(s) 635
HpyCH4V TGCA 3 cut(s) 192, 328, 1253
HpyF10VI GCNNNNNNNGC 4 cut(s) 209, 1004, 1336, 1566
HpyF3I CTNAG 4 cut(s) 9, 117, 742, 1155
HpySE526I ACGT 1 cut(s) 635
Hsp92I GRCGYC 1 cut(s) 635
Hsp92II CATG 6 cut(s) 542, 551, 842, 875, 1007, 1478
HspAI GCGC 2 cut(s) 716, 1517
Kzo9I GATC 5 cut(s) 148, 565, 727, 1042, 1309
LguI GCTCTTC 1 cut(s) 618
LweI GCATC 3 cut(s) 88, 793, 1705
MaeI CTAG 5 cut(s) 152, 279, 807, 1449, 1521
MaeII ACGT 1 cut(s) 635
MaeIII GTNAC 7 cut(s) 38, 80, 350, 400, 466, 866, 1484
MalI GATC 5 cut(s) 150, 567, 729, 1044, 1311
MbiI CCGCTC 1 cut(s) 1326
MboI GATC 5 cut(s) 148, 565, 727, 1042, 1309
MboII GAAGA 9 cut(s) 140, 158, 191, 521, 546, 605, 605, 916, 1575
MfeI CAATTG 1 cut(s) 820
MflI RGATCY 3 cut(s) 148, 565, 1309
MhlI GDGCHC 4 cut(s) 430, 450, 1000, 1291
MluCI AATT 6 cut(s) 218, 475, 820, 928, 1074, 1131
MlyI GAGTC 4 cut(s) 35, 77, 1275, 1480
MmeI TCCRAC 1 cut(s) 1632
Mph1103I ATGCAT 1 cut(s) 194
MroXI GAANNNNTTC 1 cut(s) 693
MseI TTAA 4 cut(s) 69, 482, 986, 1059
MslI CAYNNNNRTG 2 cut(s) 1143, 1377
MspA1I CMGCKG 2 cut(s) 901, 968
MspI CCGG 3 cut(s) 29, 993, 1293
MspR9I CCNGG 9 cut(s) 29, 993, 1089, 1242, 1293, 1294, 1422, 1434, 1600
MunI CAATTG 1 cut(s) 820
Mva1269I GAATGC 3 cut(s) 194, 857, 1071
MvaI CCWGG 5 cut(s) 1089, 1242, 1422, 1434, 1600
MwoI GCNNNNNNNGC 4 cut(s) 209, 1004, 1336, 1566
NciI CCSGG 4 cut(s) 29, 993, 1293, 1294
NdeII GATC 5 cut(s) 148, 565, 727, 1042, 1309
NheI GCTAGC 1 cut(s) 806
NlaIII CATG 6 cut(s) 542, 551, 842, 875, 1007, 1478
NlaIV GGNNCC 3 cut(s) 1290, 1322, 1544
NmuCI GTSAC 5 cut(s) 38, 80, 350, 400, 866
NsiI ATGCAT 1 cut(s) 194
NspI RCATGY 2 cut(s) 542, 551
OliI CACNNNNGTG 1 cut(s) 1143
PaeI GCATGC 1 cut(s) 542
PaeR7I CTCGAG 1 cut(s) 1395
PagI TCATGA 1 cut(s) 1474
PciI ACATGT 1 cut(s) 547
PciSI GCTCTTC 1 cut(s) 618
PcsI WCGNNNNNNNCGW 1 cut(s) 1705
PctI GAATGC 3 cut(s) 194, 857, 1071
PdmI GAANNNNTTC 1 cut(s) 693
PfeI GAWTC 8 cut(s) 5, 32, 233, 384, 584, 689, 694, 1604
PflMI CCANNNNNTGG 2 cut(s) 1439, 1466
PfoI TCCNGGA 2 cut(s) 27, 1240
PleI GAGTC 4 cut(s) 35, 77, 1275, 1479
PpsI GAGTC 4 cut(s) 35, 77, 1275, 1479
PpuMI RGGWCCY 1 cut(s) 1542
PscI ACATGT 1 cut(s) 547
Psp5II RGGWCCY 1 cut(s) 1542
Psp6I CCWGG 5 cut(s) 1087, 1240, 1420, 1432, 1598
PspEI GGTNACC 1 cut(s) 350
PspGI CCWGG 5 cut(s) 1087, 1240, 1420, 1432, 1598
PspN4I GGNNCC 3 cut(s) 1290, 1322, 1544
PspPI GGNCC 6 cut(s) 990, 1114, 1295, 1415, 1442, 1542
PspPPI RGGWCCY 1 cut(s) 1542
PsuI RGATCY 3 cut(s) 148, 565, 1309
PvuII CAGCTG 1 cut(s) 968
RseI CAYNNNNRTG 2 cut(s) 1143, 1377
SalI GTCGAC 1 cut(s) 1232
SapI GCTCTTC 1 cut(s) 618
SaqAI TTAA 4 cut(s) 69, 482, 986, 1059
Sau3AI GATC 5 cut(s) 148, 565, 727, 1042, 1309
Sau96I GGNCC 6 cut(s) 990, 1114, 1295, 1415, 1442, 1542
SchI GAGTC 4 cut(s) 35, 77, 1275, 1480
ScrFI CCNGG 9 cut(s) 29, 993, 1089, 1242, 1293, 1294, 1422, 1434, 1600
SduI GDGCHC 4 cut(s) 430, 450, 1000, 1291
SfaNI GCATC 3 cut(s) 88, 793, 1705
Sfr274I CTCGAG 1 cut(s) 1395
SinI GGWCC 2 cut(s) 1114, 1542
SlaI CTCGAG 1 cut(s) 1395
SmaI CCCGGG 1 cut(s) 1294
SmiMI CAYNNNNRTG 2 cut(s) 1143, 1377
SmlI CTYRAG 4 cut(s) 561, 573, 1315, 1395
SmoI CTYRAG 4 cut(s) 561, 573, 1315, 1395
SpeI ACTAGT 1 cut(s) 278
SphI GCATGC 1 cut(s) 542
Sse9I AATT 6 cut(s) 218, 475, 820, 928, 1074, 1131
SsiI CCGC 5 cut(s) 157, 892, 901, 1324, 1495
SspI AATATT 1 cut(s) 319
SspMI CTAG 5 cut(s) 152, 279, 807, 1449, 1521
StyD4I CCNGG 9 cut(s) 27, 991, 1087, 1240, 1291, 1292, 1420, 1432, 1598
StyI CCWWGG 2 cut(s) 291, 1052
TaaI ACNGT 6 cut(s) 143, 439, 1142, 1231, 1484, 1709
TaiI ACGT 1 cut(s) 638
TaqI TCGA 9 cut(s) 249, 332, 430, 692, 946, 1185, 1233, 1396, 1502
TasI AATT 6 cut(s) 218, 475, 820, 928, 1074, 1131
TfiI GAWTC 8 cut(s) 5, 32, 233, 384, 584, 689, 694, 1604
Tru1I TTAA 4 cut(s) 69, 482, 986, 1059
Tru9I TTAA 4 cut(s) 69, 482, 986, 1059
TscAI CASTG 3 cut(s) 148, 530, 1576
TseFI GTSAC 5 cut(s) 38, 80, 350, 400, 866
Tsp45I GTSAC 5 cut(s) 38, 80, 350, 400, 866
TspDTI ATGAA 2 cut(s) 231, 1290
TspGWI ACGGA 2 cut(s) 410, 452
TspMI CCCGGG 1 cut(s) 1292
TspRI CASTG 3 cut(s) 148, 530, 1576
Van91I CCANNNNNTGG 2 cut(s) 1439, 1466
VpaK11BI GGWCC 2 cut(s) 1114, 1542
XagI CCTNNNNNAGG 2 cut(s) 411, 1537
XceI RCATGY 2 cut(s) 542, 551
XhoI CTCGAG 1 cut(s) 1395
XmaI CCCGGG 1 cut(s) 1292
XmiI GTMKAC 1 cut(s) 1233
XmnI GAANNNNTTC 1 cut(s) 693
XspI CTAG 5 cut(s) 152, 279, 807, 1449, 1521
ZraI GACGTC 1 cut(s) 636
Zsp2I ATGCAT 1 cut(s) 194
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.