proline-rich domain in spliceosome associated proteins
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G67210 AT1G67210 AT1G67210 AT5G38600 AT5G38600 AT5G38600 |
| fragaria_vesca | FvH4_6g45480 FvH4_6g45480 |
| malus_domestica | MD09G1082600.v1.1 MD17G1073100.v1.1 |
| prunus_persica | Prupe.3G241000_v2.0.a1 Prupe.3G241000_v2.0.a1 Prupe.3G241000_v2.0.a1 Prupe.3G241000_v2.0.a1 |
| pyrus_communis | pycom09g00910 pycom17g07400 |
| rosa_chinensis | RchiOBHm_Chr2g0163421 |
| rosa_roxburghii | Rroxscaffold_2G00087350 |
| rosa_rugosa | Rorug02G0502500 Rorug02G0502600 |
| rosa_samantha | Rh2AG569500 Rh2BG581600 Rh2CG551400 Rh2DG591500 |
| rosa_wichuraiana | Rw2G047130 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB1I | GGYRCC | 1 cut(s) | 1348 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 1526 |
| AccII | CGCG | 2 cut(s) | 1440, 1691 |
| AciI | CCGC | 5 cut(s) | 59, 710, 1118, 1438, 1691 |
| AclWI | GGATC | 2 cut(s) | 1106, 1191 |
| AcsI | RAATTY | 2 cut(s) | 13, 1295 |
| AcuI | CTGAAG | 2 cut(s) | 510, 1554 |
| AfiI | CCNNNNNNNGG | 6 cut(s) | 35, 463, 1411, 1526, 1592, 1596 |
| AjiI | CACGTC | 1 cut(s) | 784 |
| AjnI | CCWGG | 6 cut(s) | 1060, 1300, 1351, 1454, 1480, 1492 |
| Alw21I | GWGCWC | 2 cut(s) | 961, 1069 |
| Alw26I | GTCTC | 3 cut(s) | 659, 1073, 1461 |
| AlwI | GGATC | 2 cut(s) | 1106, 1191 |
| AoxI | GGCC | 2 cut(s) | 1058, 1475 |
| ApeKI | GCWGC | 1 cut(s) | 944 |
| ApoI | RAATTY | 2 cut(s) | 13, 1295 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 1481, 1513 |
| AseI | ATTAAT | 1 cut(s) | 840 |
| Asp700I | GAANNNNTTC | 2 cut(s) | 1251, 1627 |
| AspLEI | GCGC | 2 cut(s) | 1504, 1691 |
| AspS9I | GGNCC | 4 cut(s) | 444, 1452, 1475, 1599 |
| AsuC2I | CCSGG | 2 cut(s) | 1158, 1274 |
| AsuHPI | GGTGA | 7 cut(s) | 50, 251, 671, 1256, 1427, 1665, 1778 |
| AvaII | GGWCC | 3 cut(s) | 444, 1452, 1599 |
| AxyI | CCTNAGG | 1 cut(s) | 811 |
| BaeGI | GKGCMC | 2 cut(s) | 789, 1351 |
| BanI | GGYRCC | 1 cut(s) | 1348 |
| BbsI | GAAGAC | 1 cut(s) | 707 |
| Bbv12I | GWGCWC | 2 cut(s) | 961, 1069 |
| BbvI | GCAGC | 1 cut(s) | 931 |
| BccI | CCATC | 9 cut(s) | 230, 718, 1043, 1198, 1208, 1413, 1466, 1513, 1791 |
| BciT130I | CCWGG | 6 cut(s) | 1062, 1302, 1353, 1456, 1482, 1494 |
| BcnI | CCSGG | 2 cut(s) | 1158, 1274 |
| BcoDI | GTCTC | 3 cut(s) | 659, 1073, 1461 |
| BfaI | CTAG | 5 cut(s) | 498, 561, 1166, 1377, 1769 |
| BglII | AGATCT | 1 cut(s) | 1369 |
| BisI | GCNGC | 1 cut(s) | 945 |
| BlsI | GCNGC | 1 cut(s) | 946 |
| Bme1390I | CCNGG | 8 cut(s) | 1062, 1158, 1274, 1302, 1353, 1456, 1482, 1494 |
| Bme18I | GGWCC | 3 cut(s) | 444, 1452, 1599 |
| BmgBI | CACGTC | 1 cut(s) | 784 |
| BmgT120I | GGNCC | 4 cut(s) | 444, 1452, 1475, 1599 |
| BmiI | GGNNCC | 4 cut(s) | 1350, 1382, 1416, 1601 |
| BmrFI | CCNGG | 8 cut(s) | 1062, 1158, 1274, 1302, 1353, 1456, 1482, 1494 |
| BmrI | ACTGGG | 1 cut(s) | 1597 |
| BmsI | GCATC | 3 cut(s) | 331, 862, 1441 |
| BmuI | ACTGGG | 1 cut(s) | 1597 |
| BpiI | GAAGAC | 1 cut(s) | 707 |
| BpmI | CTGGAG | 1 cut(s) | 1017 |
| BpuEI | CTTGAG | 2 cut(s) | 596, 615 |
| BpuMI | CCSGG | 2 cut(s) | 1158, 1274 |
| BsaBI | GATNNNNATC | 1 cut(s) | 1182 |
| BsaI | GGTCTC | 1 cut(s) | 659 |
| BsaJI | CCNNGG | 3 cut(s) | 1121, 1455, 1492 |
| Bsc4I | CCNNNNNNNGG | 6 cut(s) | 35, 463, 1411, 1526, 1592, 1596 |
| Bse1I | ACTGG | 2 cut(s) | 428, 1603 |
| Bse21I | CCTNAGG | 1 cut(s) | 811 |
| Bse3DI | GCAATG | 1 cut(s) | 196 |
| Bse8I | GATNNNNATC | 1 cut(s) | 1182 |
| BseBI | CCWGG | 6 cut(s) | 1062, 1302, 1353, 1456, 1482, 1494 |
| BseDI | CCNNGG | 3 cut(s) | 1121, 1455, 1492 |
| BseGI | GGATG | 2 cut(s) | 346, 729 |
| BseJI | GATNNNNATC | 1 cut(s) | 1182 |
| BseLI | CCNNNNNNNGG | 6 cut(s) | 35, 463, 1411, 1526, 1592, 1596 |
| BseMI | GCAATG | 1 cut(s) | 196 |
| BseMII | CTCAG | 2 cut(s) | 152, 1068 |
| BseNI | ACTGG | 2 cut(s) | 428, 1603 |
| BseSI | GKGCMC | 2 cut(s) | 789, 1351 |
| BseXI | GCAGC | 1 cut(s) | 931 |
| Bsh1236I | CGCG | 2 cut(s) | 1440, 1691 |
| BshFI | GGCC | 2 cut(s) | 1060, 1477 |
| BshNI | GGYRCC | 1 cut(s) | 1348 |
| BsiHKAI | GWGCWC | 2 cut(s) | 961, 1069 |
| BsiSI | CCGG | 2 cut(s) | 1157, 1274 |
| BslFI | GGGAC | 1 cut(s) | 1585 |
| BslI | CCNNNNNNNGG | 6 cut(s) | 35, 463, 1411, 1526, 1592, 1596 |
| BsmAI | GTCTC | 3 cut(s) | 659, 1073, 1461 |
| BsmBI | CGTCTC | 1 cut(s) | 1461 |
| BsmFI | GGGAC | 1 cut(s) | 1585 |
| BsmI | GAATGC | 2 cut(s) | 61, 1140 |
| BsnI | GGCC | 2 cut(s) | 1060, 1477 |
| Bso31I | GGTCTC | 1 cut(s) | 659 |
| Bsp1286I | GDGCHC | 4 cut(s) | 789, 961, 1069, 1351 |
| Bsp143I | GATC | 4 cut(s) | 796, 1111, 1183, 1369 |
| BspACI | CCGC | 5 cut(s) | 59, 710, 1118, 1438, 1691 |
| BspANI | GGCC | 2 cut(s) | 1060, 1477 |
| BspCNI | CTCAG | 2 cut(s) | 153, 1069 |
| BspFNI | CGCG | 2 cut(s) | 1440, 1691 |
| BspLI | GGNNCC | 4 cut(s) | 1350, 1382, 1416, 1601 |
| BspPI | GGATC | 2 cut(s) | 1106, 1191 |
| BspQI | GCTCTTC | 1 cut(s) | 687 |
| BspT107I | GGYRCC | 1 cut(s) | 1348 |
| BspTNI | GGTCTC | 1 cut(s) | 659 |
| BsrDI | GCAATG | 1 cut(s) | 196 |
| BsrI | ACTGG | 2 cut(s) | 428, 1603 |
| BssECI | CCNNGG | 3 cut(s) | 1121, 1455, 1492 |
| BssMI | GATC | 4 cut(s) | 796, 1111, 1183, 1369 |
| BssT1I | CCWWGG | 1 cut(s) | 1121 |
| Bst2UI | CCWGG | 6 cut(s) | 1062, 1302, 1353, 1456, 1482, 1494 |
| Bst6I | CTCTTC | 3 cut(s) | 657, 687, 1633 |
| BstC8I | GCNNGC | 3 cut(s) | 203, 609, 1442 |
| BstDEI | CTNAG | 3 cut(s) | 161, 811, 1077 |
| BstEII | GGTNACC | 1 cut(s) | 1148 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 1594 |
| BstF5I | GGATG | 2 cut(s) | 346, 729 |
| BstFNI | CGCG | 2 cut(s) | 1440, 1691 |
| BstHHI | GCGC | 2 cut(s) | 1504, 1691 |
| BstKTI | GATC | 4 cut(s) | 799, 1114, 1186, 1372 |
| BstMAI | GTCTC | 3 cut(s) | 659, 1073, 1461 |
| BstMBI | GATC | 4 cut(s) | 796, 1111, 1183, 1369 |
| BstMWI | GCNNNNNNNGC | 3 cut(s) | 613, 1096, 1401 |
| BstNI | CCWGG | 6 cut(s) | 1062, 1302, 1353, 1456, 1482, 1494 |
| BstNSI | RCATGY | 3 cut(s) | 205, 611, 620 |
| BstPI | GGTNACC | 1 cut(s) | 1148 |
| BstSCI | CCNGG | 8 cut(s) | 1060, 1156, 1272, 1300, 1351, 1454, 1480, 1492 |
| BstSLI | GKGCMC | 2 cut(s) | 789, 1351 |
| BstUI | CGCG | 2 cut(s) | 1440, 1691 |
| BstV1I | GCAGC | 1 cut(s) | 931 |
| BstV2I | GAAGAC | 1 cut(s) | 707 |
| BstX2I | RGATCY | 1 cut(s) | 1369 |
| BstXI | CCANNNNNNTGG | 2 cut(s) | 769, 1122 |
| BstYI | RGATCY | 1 cut(s) | 1369 |
| Bsu36I | CCTNAGG | 1 cut(s) | 811 |
| BsuRI | GGCC | 2 cut(s) | 1060, 1477 |
| BtgZI | GCGATG | 1 cut(s) | 87 |
| BtrI | CACGTC | 1 cut(s) | 784 |
| BtsCI | GGATG | 2 cut(s) | 346, 729 |
| BtsI | GCAGTG | 1 cut(s) | 599 |
| BtsIMutI | CAGTG | 3 cut(s) | 157, 599, 961 |
| Cac8I | GCNNGC | 3 cut(s) | 203, 609, 1442 |
| CfoI | GCGC | 2 cut(s) | 1504, 1691 |
| Cfr13I | GGNCC | 4 cut(s) | 444, 1452, 1475, 1599 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 448, 483 |
| DdeI | CTNAG | 3 cut(s) | 161, 811, 1077 |
| DpnI | GATC | 4 cut(s) | 798, 1113, 1185, 1371 |
| DpnII | GATC | 4 cut(s) | 796, 1111, 1183, 1369 |
| Eam1104I | CTCTTC | 3 cut(s) | 657, 687, 1633 |
| EarI | CTCTTC | 3 cut(s) | 657, 687, 1633 |
| Eco130I | CCWWGG | 1 cut(s) | 1121 |
| Eco147I | AGGCCT | 1 cut(s) | 1060 |
| Eco31I | GGTCTC | 1 cut(s) | 659 |
| Eco32I | GATATC | 1 cut(s) | 1163 |
| Eco47I | GGWCC | 3 cut(s) | 444, 1452, 1599 |
| Eco57I | CTGAAG | 2 cut(s) | 510, 1554 |
| Eco81I | CCTNAGG | 1 cut(s) | 811 |
| Eco91I | GGTNACC | 1 cut(s) | 1148 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 1594 |
| EcoO109I | RGGNCCY | 2 cut(s) | 444, 1599 |
| EcoO65I | GGTNACC | 1 cut(s) | 1148 |
| EcoRII | CCWGG | 6 cut(s) | 1060, 1300, 1351, 1454, 1480, 1492 |
| EcoRV | GATATC | 1 cut(s) | 1163 |
| EcoT14I | CCWWGG | 1 cut(s) | 1121 |
| ErhI | CCWWGG | 1 cut(s) | 1121 |
| Esp3I | CGTCTC | 1 cut(s) | 1461 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 1612, 1644 |
| FaqI | GGGAC | 1 cut(s) | 1585 |
| FauI | CCCGC | 2 cut(s) | 52, 1684 |
| Fnu4HI | GCNGC | 1 cut(s) | 945 |
| FokI | GGATG | 2 cut(s) | 353, 736 |
| Fsp4HI | GCNGC | 1 cut(s) | 945 |
| FspBI | CTAG | 5 cut(s) | 498, 561, 1166, 1377, 1769 |
| GlaI | GCGC | 2 cut(s) | 1503, 1690 |
| GluI | GCNGC | 1 cut(s) | 945 |
| GsuI | CTGGAG | 1 cut(s) | 1017 |
| HaeIII | GGCC | 2 cut(s) | 1060, 1477 |
| HapII | CCGG | 2 cut(s) | 1157, 1274 |
| HhaI | GCGC | 2 cut(s) | 1504, 1691 |
| Hin6I | GCGC | 2 cut(s) | 1502, 1689 |
| HinP1I | GCGC | 2 cut(s) | 1502, 1689 |
| HincII | GTYRAC | 2 cut(s) | 952, 1489 |
| HindII | GTYRAC | 2 cut(s) | 952, 1489 |
| HindIII | AAGCTT | 3 cut(s) | 522, 572, 1088 |
| HpaII | CCGG | 2 cut(s) | 1157, 1274 |
| HphI | GGTGA | 7 cut(s) | 50, 251, 671, 1256, 1427, 1665, 1778 |
| Hpy166II | GTNNAC | 7 cut(s) | 457, 566, 952, 965, 1309, 1388, 1489 |
| Hpy188I | TCNGA | 9 cut(s) | 10, 247, 361, 601, 1078, 1257, 1414, 1595, 1609 |
| Hpy188III | TCNNGA | 5 cut(s) | 52, 632, 1025, 1070, 1166 |
| Hpy8I | GTNNAC | 7 cut(s) | 457, 566, 952, 965, 1309, 1388, 1489 |
| HpyAV | CCTTC | 6 cut(s) | 284, 434, 679, 1590, 1600, 1634 |
| HpyCH4IV | ACGT | 2 cut(s) | 783, 982 |
| HpyCH4V | TGCA | 6 cut(s) | 201, 377, 409, 611, 845, 875 |
| HpyF10VI | GCNNNNNNNGC | 3 cut(s) | 613, 1096, 1401 |
| HpyF3I | CTNAG | 3 cut(s) | 161, 811, 1077 |
| HpySE526I | ACGT | 2 cut(s) | 783, 982 |
| HspAI | GCGC | 2 cut(s) | 1502, 1689 |
| Kzo9I | GATC | 4 cut(s) | 796, 1111, 1183, 1369 |
| LguI | GCTCTTC | 1 cut(s) | 687 |
| Lsp1109I | GCAGC | 1 cut(s) | 931 |
| LweI | GCATC | 3 cut(s) | 331, 862, 1441 |
| MaeI | CTAG | 5 cut(s) | 498, 561, 1166, 1377, 1769 |
| MaeII | ACGT | 2 cut(s) | 783, 982 |
| MaeIII | GTNAC | 6 cut(s) | 326, 367, 535, 935, 1148, 1544 |
| MalI | GATC | 4 cut(s) | 798, 1113, 1185, 1371 |
| MboI | GATC | 4 cut(s) | 796, 1111, 1183, 1369 |
| MboII | GAAGA | 8 cut(s) | 320, 615, 674, 674, 712, 1241, 1620, 1632 |
| MfeI | CAATTG | 2 cut(s) | 889, 1362 |
| MflI | RGATCY | 1 cut(s) | 1369 |
| MhlI | GDGCHC | 4 cut(s) | 789, 961, 1069, 1351 |
| MlyI | GAGTC | 1 cut(s) | 392 |
| MmeI | TCCRAC | 4 cut(s) | 786, 1034, 1688, 1772 |
| MroXI | GAANNNNTTC | 2 cut(s) | 1251, 1627 |
| MseI | TTAA | 6 cut(s) | 90, 489, 840, 1055, 1128, 1224 |
| MslI | CAYNNNNRTG | 3 cut(s) | 120, 171, 414 |
| MspA1I | CMGCKG | 1 cut(s) | 1037 |
| MspI | CCGG | 2 cut(s) | 1157, 1274 |
| MspR9I | CCNGG | 8 cut(s) | 1062, 1158, 1274, 1302, 1353, 1456, 1482, 1494 |
| MunI | CAATTG | 2 cut(s) | 889, 1362 |
| Mva1269I | GAATGC | 2 cut(s) | 61, 1140 |
| MvaI | CCWGG | 6 cut(s) | 1062, 1302, 1353, 1456, 1482, 1494 |
| MvnI | CGCG | 2 cut(s) | 1440, 1691 |
| MwoI | GCNNNNNNNGC | 3 cut(s) | 613, 1096, 1401 |
| NciI | CCSGG | 2 cut(s) | 1158, 1274 |
| NdeII | GATC | 4 cut(s) | 796, 1111, 1183, 1369 |
| NlaIV | GGNNCC | 4 cut(s) | 1350, 1382, 1416, 1601 |
| NmuCI | GTSAC | 1 cut(s) | 535 |
| NspI | RCATGY | 3 cut(s) | 205, 611, 620 |
| PaeI | GCATGC | 2 cut(s) | 205, 611 |
| PceI | AGGCCT | 1 cut(s) | 1060 |
| PciSI | GCTCTTC | 1 cut(s) | 687 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 1786 |
| PctI | GAATGC | 2 cut(s) | 61, 1140 |
| PdmI | GAANNNNTTC | 2 cut(s) | 1251, 1627 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 1526 |
| PfoI | TCCNGGA | 1 cut(s) | 1300 |
| PkrI | GCNGC | 1 cut(s) | 946 |
| PleI | GAGTC | 1 cut(s) | 391 |
| PpsI | GAGTC | 1 cut(s) | 391 |
| PpuMI | RGGWCCY | 2 cut(s) | 444, 1599 |
| PshBI | ATTAAT | 1 cut(s) | 840 |
| Psp5II | RGGWCCY | 2 cut(s) | 444, 1599 |
| Psp6I | CCWGG | 6 cut(s) | 1060, 1300, 1351, 1454, 1480, 1492 |
| PspEI | GGTNACC | 1 cut(s) | 1148 |
| PspGI | CCWGG | 6 cut(s) | 1060, 1300, 1351, 1454, 1480, 1492 |
| PspN4I | GGNNCC | 4 cut(s) | 1350, 1382, 1416, 1601 |
| PspPI | GGNCC | 4 cut(s) | 444, 1452, 1475, 1599 |
| PspPPI | RGGWCCY | 2 cut(s) | 444, 1599 |
| PsuI | RGATCY | 1 cut(s) | 1369 |
| PvuII | CAGCTG | 1 cut(s) | 1037 |
| RseI | CAYNNNNRTG | 3 cut(s) | 120, 171, 414 |
| SapI | GCTCTTC | 1 cut(s) | 687 |
| SaqAI | TTAA | 6 cut(s) | 90, 489, 840, 1055, 1128, 1224 |
| SatI | GCNGC | 1 cut(s) | 945 |
| Sau3AI | GATC | 4 cut(s) | 796, 1111, 1183, 1369 |
| Sau96I | GGNCC | 4 cut(s) | 444, 1452, 1475, 1599 |
| SchI | GAGTC | 1 cut(s) | 392 |
| ScrFI | CCNGG | 8 cut(s) | 1062, 1158, 1274, 1302, 1353, 1456, 1482, 1494 |
| SduI | GDGCHC | 4 cut(s) | 789, 961, 1069, 1351 |
| SfaNI | GCATC | 3 cut(s) | 331, 862, 1441 |
| SinI | GGWCC | 3 cut(s) | 444, 1452, 1599 |
| SmiMI | CAYNNNNRTG | 3 cut(s) | 120, 171, 414 |
| SmlI | CTYRAG | 2 cut(s) | 575, 630 |
| SmoI | CTYRAG | 2 cut(s) | 575, 630 |
| SphI | GCATGC | 2 cut(s) | 205, 611 |
| SseBI | AGGCCT | 1 cut(s) | 1060 |
| SsiI | CCGC | 5 cut(s) | 59, 710, 1118, 1438, 1691 |
| SspMI | CTAG | 5 cut(s) | 498, 561, 1166, 1377, 1769 |
| StuI | AGGCCT | 1 cut(s) | 1060 |
| StyD4I | CCNGG | 8 cut(s) | 1060, 1156, 1272, 1300, 1351, 1454, 1480, 1492 |
| StyI | CCWWGG | 1 cut(s) | 1121 |
| TaiI | ACGT | 2 cut(s) | 786, 985 |
| TaqI | TCGA | 6 cut(s) | 51, 234, 258, 1071, 1293, 1618 |
| Tru1I | TTAA | 6 cut(s) | 90, 489, 840, 1055, 1128, 1224 |
| Tru9I | TTAA | 6 cut(s) | 90, 489, 840, 1055, 1128, 1224 |
| TscAI | CASTG | 3 cut(s) | 157, 599, 961 |
| TseFI | GTSAC | 1 cut(s) | 535 |
| TseI | GCWGC | 1 cut(s) | 944 |
| Tsp45I | GTSAC | 1 cut(s) | 535 |
| TspGWI | ACGGA | 1 cut(s) | 1099 |
| TspRI | CASTG | 3 cut(s) | 157, 599, 961 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 1526 |
| VpaK11BI | GGWCC | 3 cut(s) | 444, 1452, 1599 |
| VspI | ATTAAT | 1 cut(s) | 840 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 1594 |
| XapI | RAATTY | 2 cut(s) | 13, 1295 |
| XbaI | TCTAGA | 1 cut(s) | 1165 |
| XceI | RCATGY | 3 cut(s) | 205, 611, 620 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 464 |
| XmnI | GAANNNNTTC | 2 cut(s) | 1251, 1627 |
| XspI | CTAG | 5 cut(s) | 498, 561, 1166, 1377, 1769 |