MD17G1073100.v1.1

proline-rich domain in spliceosome associated proteins

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr17
OG0007074
Physical Location & Seq
Forward (+)
5865671 .. 5871183
5513 bp
Loading structure...
UTR
Exon/CDS
Intron
MD17G1073100.v1.1.491

Sequence Viewer

Length: 1803 bp
ATGGAATCCCAGAATTTTATCGGTCTCCTTGCTTCTGGTGATTCTGTCATCGAGAATGTGGGGCACGAAAGTGATGTTCAATATGAAGTTAAAGAAAATGGGGCGGATCTGGGGCAGGAAAGTGATGTTCAATGTGAAGTTCAAGCTAACGGTGAGAACCTGAGGCATGAAAGTGATGTTCAATATGAAGTTACCCATTGCATGCTGGAATCAAACCTTGAAAAAGAATTGGTTGAAGGTGATTCAGATATGGAAATTGAGGACATAAACAACCTCCCTGCCTTGGACAGTTCTCGTTCGGCAAATGTTGAAATCAAATTAGGGGGTAACAAGGACGGGGATGCTCATTGTATACTGTCTGAAACTGTTACAGTTGCAGGAAAGTCAAATGTTTTGTTCCCGAAGGTGCATGAAAATGGTTGCCTTCCGGTCCAAGATTCAAGTACCTTTAAAGTCCCCAAAAAGGGCGGCACTTCTGTATCAGGTGTTAAGAGAGCTAGAATGACAGTTGATGAACATAAAGCTTCAGTGCATGTGACATATGAGTCGTTGACAAGAGCTAGTAAACAAAAGCTTGAAGAACTATTACAGCAGTGGTCAGAGTGGCATGCAAAGCATTCTTCTTCATCTCAAGATTCTATTGAAGTAGTGGAATCAGGCGAAGAGACCTTCTTTCCAGCTCTTCATGTTGGCATAGAGAGGACGTCTGCGGTGTCTTTTTGGATCGACAACCAAACACGGAAGGCAGATAACAACGAATCCAATATTTTGGATAACAATGATGTGCCCCTGTATGATCGGGGTTACGCCTTAGGTTTGACTTTGGCGGGTGGCTCAAGTAATGCGGAGGGAGGCTTGGAGATTATAGATGATGCAAGCCGTTGTTTCAATTGTGGCTCTTATAGTCATTCGTTGAAAAATTGTCCAAAGCCTCGTAACAATGCAGCTGTCAACAGTGCCCGTAAACAGCTCAAGTCCAAACGTAATCAGAATGCTAGTTCTCGCAATCCAACACGATACTATCAGAATTCTCCAGCTGGAAAGTATGATGGTTTAAGGCCTGGTGCCCTCGATGCTGAGACACGGAAGCTTTTGGGTCTTGGGGAGCTTGATCCACCACCTTGGCTTAACAGAATGCGAGAAATTGGTTACCCACCAGGATATCTAGATGTAGATGATGAAGATCAGCCATCAGGGATAATAATATATGCTGATGGGGAAATTAAGGAAGAACAGGAGGACGGGGAAATTATTGAGACAGACTTTGCTGATCCAGCGAGGAAGAAGACGGTCAAATTTCCAGGAGTAAATGCACCAATCCCAGAAAATGCTGATGAGAGACTTTGGGCTCCTGGACATTCATTTGAAGATCTCTCTAGGAACCGTTCACACAGCAGAGTGAGCCATCATTCAGAACCTGTCAGCAGAGGGCATCACCGCGAGCAAAGGTGGTCCAGGGATTGTAGAGACGATGGGCCTCCTGGCGTTGATCCAGGTTTTGCGCCATCTAGTTACCCTCCAAGATACGGTAGCTATGATTACGGTTACAACTCTCACGGTTCAAGTAGTGCTTCAGCACCAAGAAGTCCTACCTTCGGAAGGTCCCAGTCAGACAGAGTTAGAAGAATCCCGTCATCCAATGAAGGTTCTTTTCCATACTCCAATTCTCGTCATTCACCAAAGAATTATGACTCGGGCAGTACTGAAAGTTGGAACGATGGAAGCAGGAATGACTACGACCTTGATCTTTCAACTTATAGTAGGGATAGGCTAGACAGGCATCGCCATCACCGCAGGAGGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0031974 GO:0031981 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044464 GO:0070013
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
PSP zf-CCHC

Protein Analysis

601

Amino Acids

66.68

Weight (kDa)

5.33

Isoelectric Point (pI)

56.89

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PSP PF04046 353 - 390 1.8e-11 PSP
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 544
AatII GACGTC 1 cut(s) 707
AccB1I GGYRCC 1 cut(s) 1064
AccI GTMKAC 1 cut(s) 352
AccII CGCG 1 cut(s) 1440
AciI CCGC 7 cut(s) 104, 468, 710, 827, 845, 1438, 1792
AclWI GGATC 5 cut(s) 114, 731, 1106, 1265, 1484
AcsI RAATTY 3 cut(s) 13, 1027, 1295
AcuI CTGAAG 2 cut(s) 510, 1557
AcyI GRCGYC 1 cut(s) 704
AfaI GTAC 2 cut(s) 445, 1702
AfiI CCNNNNNNNGG 6 cut(s) 283, 463, 464, 1526, 1595, 1599
AjnI CCWGG 7 cut(s) 1060, 1156, 1300, 1351, 1454, 1480, 1492
AleI CACNNNNGTG 1 cut(s) 69
Alw26I GTCTC 6 cut(s) 29, 659, 1073, 1250, 1333, 1461
AlwI GGATC 5 cut(s) 114, 731, 1106, 1265, 1484
AlwNI CAGNNNCTG 1 cut(s) 1418
Ama87I CYCGRG 1 cut(s) 1693
AoxI GGCC 2 cut(s) 1058, 1475
ApeKI GCWGC 1 cut(s) 944
ApoI RAATTY 3 cut(s) 13, 1027, 1295
AspLEI GCGC 1 cut(s) 1504
AspS9I GGNCC 4 cut(s) 430, 1452, 1475, 1602
AsuHPI GGTGA 6 cut(s) 50, 164, 251, 1427, 1668, 1781
AvaI CYCGRG 1 cut(s) 1693
AvaII GGWCC 3 cut(s) 430, 1452, 1602
AxyI CCTNAGG 2 cut(s) 161, 811
BaeGI GKGCMC 4 cut(s) 66, 789, 961, 1069
BaeI ACNNNNGTAYC 2 cut(s) 462, 495
BanI GGYRCC 1 cut(s) 1064
BanII GRGCYC 1 cut(s) 1351
BarI GAAGNNNNNNTAC 2 cut(s) 570, 602
BbsI GAAGAC 1 cut(s) 1292
BbvI GCAGC 1 cut(s) 956
BccI CCATC 8 cut(s) 1043, 1198, 1208, 1413, 1466, 1513, 1712, 1794
BceAI ACGGC 1 cut(s) 864
BciT130I CCWGG 7 cut(s) 1062, 1158, 1302, 1353, 1456, 1482, 1494
BcoDI GTCTC 6 cut(s) 29, 659, 1073, 1250, 1333, 1461
BfaI CTAG 7 cut(s) 498, 561, 996, 1166, 1377, 1509, 1772
BglII AGATCT 1 cut(s) 1369
BisI GCNGC 2 cut(s) 469, 945
BlsI GCNGC 2 cut(s) 470, 946
BmcAI AGTACT 1 cut(s) 1702
Bme1390I CCNGG 7 cut(s) 1062, 1158, 1302, 1353, 1456, 1482, 1494
Bme18I GGWCC 3 cut(s) 430, 1452, 1602
BmeT110I CYCGRG 1 cut(s) 1693
BmgT120I GGNCC 4 cut(s) 430, 1452, 1475, 1602
BmiI GGNNCC 4 cut(s) 1066, 1350, 1382, 1604
BmrFI CCNGG 7 cut(s) 1062, 1158, 1302, 1353, 1456, 1482, 1494
BmrI ACTGGG 1 cut(s) 1600
BmsI GCATC 5 cut(s) 331, 862, 1063, 1441, 1789
BmuI ACTGGG 1 cut(s) 1600
BpiI GAAGAC 1 cut(s) 1292
BpmI CTGGAG 1 cut(s) 1017
BpuEI CTTGAG 3 cut(s) 615, 820, 956
BsaBI GATNNNNATC 1 cut(s) 1182
BsaHI GRCGYC 1 cut(s) 704
BsaI GGTCTC 2 cut(s) 29, 659
BsaJI CCNNGG 3 cut(s) 282, 1121, 1455
BsaWI WCCGGW 1 cut(s) 427
Bsc4I CCNNNNNNNGG 6 cut(s) 283, 463, 464, 1526, 1595, 1599
Bse1I ACTGG 1 cut(s) 1606
Bse21I CCTNAGG 2 cut(s) 161, 811
Bse3DI GCAATG 1 cut(s) 196
Bse8I GATNNNNATC 1 cut(s) 1182
BseBI CCWGG 7 cut(s) 1062, 1158, 1302, 1353, 1456, 1482, 1494
BseDI CCNNGG 3 cut(s) 282, 1121, 1455
BseGI GGATG 2 cut(s) 346, 1634
BseJI GATNNNNATC 1 cut(s) 1182
BseLI CCNNNNNNNGG 6 cut(s) 283, 463, 464, 1526, 1595, 1599
BseMI GCAATG 1 cut(s) 196
BseMII CTCAG 2 cut(s) 152, 1068
BseNI ACTGG 1 cut(s) 1606
BseSI GKGCMC 4 cut(s) 66, 789, 961, 1069
BseXI GCAGC 1 cut(s) 956
Bsh1236I CGCG 1 cut(s) 1440
BshFI GGCC 2 cut(s) 1060, 1477
BshNI GGYRCC 1 cut(s) 1064
BsiHKCI CYCGRG 1 cut(s) 1693
BsiSI CCGG 1 cut(s) 428
BslFI GGGAC 2 cut(s) 440, 1588
BslI CCNNNNNNNGG 6 cut(s) 283, 463, 464, 1526, 1595, 1599
BsmAI GTCTC 6 cut(s) 29, 659, 1073, 1250, 1333, 1461
BsmBI CGTCTC 1 cut(s) 1461
BsmFI GGGAC 2 cut(s) 440, 1588
BsmI GAATGC 3 cut(s) 616, 997, 1140
BsnI GGCC 2 cut(s) 1060, 1477
Bso31I GGTCTC 2 cut(s) 29, 659
BsoBI CYCGRG 1 cut(s) 1693
Bsp1286I GDGCHC 5 cut(s) 66, 789, 961, 1069, 1351
Bsp143I GATC 9 cut(s) 106, 723, 796, 1111, 1183, 1270, 1369, 1489, 1744
BspACI CCGC 7 cut(s) 104, 468, 710, 827, 845, 1438, 1792
BspANI GGCC 2 cut(s) 1060, 1477
BspCNI CTCAG 2 cut(s) 153, 1069
BspFNI CGCG 1 cut(s) 1440
BspLI GGNNCC 4 cut(s) 1066, 1350, 1382, 1604
BspPI GGATC 5 cut(s) 114, 731, 1106, 1265, 1484
BspQI GCTCTTC 1 cut(s) 687
BspT107I GGYRCC 1 cut(s) 1064
BspTNI GGTCTC 2 cut(s) 29, 659
BsrDI GCAATG 1 cut(s) 196
BsrI ACTGG 1 cut(s) 1606
BssECI CCNNGG 3 cut(s) 282, 1121, 1455
BssMI GATC 9 cut(s) 106, 723, 796, 1111, 1183, 1270, 1369, 1489, 1744
BssNAI GTATAC 1 cut(s) 353
BssNI GRCGYC 1 cut(s) 704
BssT1I CCWWGG 2 cut(s) 282, 1121
Bst1107I GTATAC 1 cut(s) 353
Bst2UI CCWGG 7 cut(s) 1062, 1158, 1302, 1353, 1456, 1482, 1494
Bst6I CTCTTC 2 cut(s) 657, 687
BstACI GRCGYC 1 cut(s) 704
BstC8I GCNNGC 4 cut(s) 203, 609, 877, 1442
BstDEI CTNAG 3 cut(s) 161, 811, 1077
BstEII GGTNACC 1 cut(s) 1148
BstENI CCTNNNNNAGG 1 cut(s) 1597
BstF5I GGATG 2 cut(s) 346, 1634
BstFNI CGCG 1 cut(s) 1440
BstHHI GCGC 1 cut(s) 1504
BstKTI GATC 9 cut(s) 109, 726, 799, 1114, 1186, 1273, 1372, 1492, 1747
BstMAI GTCTC 6 cut(s) 29, 659, 1073, 1250, 1333, 1461
BstMBI GATC 9 cut(s) 106, 723, 796, 1111, 1183, 1270, 1369, 1489, 1744
BstMWI GCNNNNNNNGC 6 cut(s) 613, 1073, 1274, 1401, 1777, 1791
BstNI CCWGG 7 cut(s) 1062, 1158, 1302, 1353, 1456, 1482, 1494
BstNSI RCATGY 3 cut(s) 205, 536, 611
BstPI GGTNACC 1 cut(s) 1148
BstSCI CCNGG 7 cut(s) 1060, 1156, 1300, 1351, 1454, 1480, 1492
BstSLI GKGCMC 4 cut(s) 66, 789, 961, 1069
BstUI CGCG 1 cut(s) 1440
BstV1I GCAGC 1 cut(s) 956
BstV2I GAAGAC 1 cut(s) 1292
BstX2I RGATCY 2 cut(s) 106, 1369
BstXI CCANNNNNNTGG 2 cut(s) 769, 1122
BstYI RGATCY 2 cut(s) 106, 1369
BstZ17I GTATAC 1 cut(s) 353
Bsu36I CCTNAGG 2 cut(s) 161, 811
BsuRI GGCC 2 cut(s) 1060, 1477
BtgZI GCGATG 1 cut(s) 1766
BtsCI GGATG 2 cut(s) 346, 1634
BtsI GCAGTG 1 cut(s) 599
BtsIMutI CAGTG 3 cut(s) 534, 599, 961
Cac8I GCNNGC 4 cut(s) 203, 609, 877, 1442
CaiI CAGNNNCTG 1 cut(s) 1418
CfoI GCGC 1 cut(s) 1504
Cfr13I GGNCC 4 cut(s) 430, 1452, 1475, 1602
Csp6I GTAC 2 cut(s) 444, 1701
CviAII CATG 6 cut(s) 167, 202, 410, 533, 608, 686
CviQI GTAC 2 cut(s) 444, 1701
DdeI CTNAG 3 cut(s) 161, 811, 1077
DpnI GATC 9 cut(s) 108, 725, 798, 1113, 1185, 1272, 1371, 1491, 1746
DpnII GATC 9 cut(s) 106, 723, 796, 1111, 1183, 1270, 1369, 1489, 1744
DraI TTTAAA 1 cut(s) 451
DrdI GACNNNNNNGTC 1 cut(s) 544
DseDI GACNNNNNNGTC 1 cut(s) 544
Eam1104I CTCTTC 2 cut(s) 657, 687
EarI CTCTTC 2 cut(s) 657, 687
EciI GGCGGA 1 cut(s) 119
Eco130I CCWWGG 2 cut(s) 282, 1121
Eco147I AGGCCT 1 cut(s) 1060
Eco24I GRGCYC 1 cut(s) 1351
Eco31I GGTCTC 2 cut(s) 29, 659
Eco32I GATATC 1 cut(s) 1163
Eco47I GGWCC 3 cut(s) 430, 1452, 1602
Eco57I CTGAAG 2 cut(s) 510, 1557
Eco81I CCTNAGG 2 cut(s) 161, 811
Eco88I CYCGRG 1 cut(s) 1693
Eco91I GGTNACC 1 cut(s) 1148
EcoNI CCTNNNNNAGG 1 cut(s) 1597
EcoO109I RGGNCCY 1 cut(s) 1602
EcoO65I GGTNACC 1 cut(s) 1148
EcoRI GAATTC 1 cut(s) 1027
EcoRII CCWGG 7 cut(s) 1060, 1156, 1300, 1351, 1454, 1480, 1492
EcoRV GATATC 1 cut(s) 1163
EcoT14I CCWWGG 2 cut(s) 282, 1121
EcoT38I GRGCYC 1 cut(s) 1351
ErhI CCWWGG 2 cut(s) 282, 1121
Esp3I CGTCTC 1 cut(s) 1461
FaeI CATG 6 cut(s) 170, 205, 413, 536, 611, 689
FalI AAGNNNNNCTT 2 cut(s) 1555, 1587
FaqI GGGAC 2 cut(s) 440, 1588
FatI CATG 6 cut(s) 166, 201, 409, 532, 607, 685
FauI CCCGC 1 cut(s) 820
FauNDI CATATG 1 cut(s) 541
FblI GTMKAC 1 cut(s) 352
Fnu4HI GCNGC 2 cut(s) 469, 945
FokI GGATG 2 cut(s) 353, 1621
FriOI GRGCYC 1 cut(s) 1351
Fsp4HI GCNGC 2 cut(s) 469, 945
FspBI CTAG 7 cut(s) 498, 561, 996, 1166, 1377, 1509, 1772
GlaI GCGC 1 cut(s) 1503
GluI GCNGC 2 cut(s) 469, 945
GsuI CTGGAG 1 cut(s) 1017
HaeIII GGCC 2 cut(s) 1060, 1477
HapII CCGG 1 cut(s) 428
HhaI GCGC 1 cut(s) 1504
Hin1I GRCGYC 1 cut(s) 704
Hin1II CATG 6 cut(s) 170, 205, 413, 536, 611, 689
Hin6I GCGC 1 cut(s) 1502
HinP1I GCGC 1 cut(s) 1502
HincII GTYRAC 2 cut(s) 552, 952
HindII GTYRAC 2 cut(s) 552, 952
HindIII AAGCTT 3 cut(s) 522, 572, 1088
HpaII CCGG 1 cut(s) 428
HphI GGTGA 6 cut(s) 50, 164, 251, 1427, 1668, 1781
Hpy166II GTNNAC 6 cut(s) 353, 552, 566, 952, 965, 1388
Hpy188I TCNGA 8 cut(s) 247, 361, 601, 990, 1026, 1414, 1598, 1612
Hpy188III TCNNGA 4 cut(s) 52, 400, 632, 1166
Hpy8I GTNNAC 6 cut(s) 353, 552, 566, 952, 965, 1388
HpyAV CCTTC 8 cut(s) 230, 397, 434, 679, 736, 1593, 1603, 1637
HpyCH4IV ACGT 2 cut(s) 704, 982
HpyCH4V TGCA 8 cut(s) 201, 377, 409, 532, 611, 875, 944, 1313
HpyF10VI GCNNNNNNNGC 6 cut(s) 613, 1073, 1274, 1401, 1777, 1791
HpyF3I CTNAG 3 cut(s) 161, 811, 1077
HpySE526I ACGT 2 cut(s) 704, 982
Hsp92I GRCGYC 1 cut(s) 704
Hsp92II CATG 6 cut(s) 170, 205, 413, 536, 611, 689
HspAI GCGC 1 cut(s) 1502
Kzo9I GATC 9 cut(s) 106, 723, 796, 1111, 1183, 1270, 1369, 1489, 1744
LguI GCTCTTC 1 cut(s) 687
LmnI GCTCC 2 cut(s) 1105, 1354
Lsp1109I GCAGC 1 cut(s) 956
LweI GCATC 5 cut(s) 331, 862, 1063, 1441, 1789
MaeI CTAG 7 cut(s) 498, 561, 996, 1166, 1377, 1509, 1772
MaeII ACGT 2 cut(s) 704, 982
MaeIII GTNAC 9 cut(s) 190, 326, 367, 535, 803, 935, 1148, 1511, 1544
MalI GATC 9 cut(s) 108, 725, 798, 1113, 1185, 1272, 1371, 1491, 1746
MboI GATC 9 cut(s) 106, 723, 796, 1111, 1183, 1270, 1369, 1489, 1744
MfeI CAATTG 1 cut(s) 889
MflI RGATCY 2 cut(s) 106, 1369
MhlI GDGCHC 5 cut(s) 66, 789, 961, 1069, 1351
MlyI GAGTC 2 cut(s) 554, 1685
MmeI TCCRAC 2 cut(s) 1034, 1691
MseI TTAA 6 cut(s) 90, 450, 489, 1055, 1128, 1224
MslI CAYNNNNRTG 3 cut(s) 69, 171, 414
MspA1I CMGCKG 2 cut(s) 947, 1037
MspI CCGG 1 cut(s) 428
MspR9I CCNGG 7 cut(s) 1062, 1158, 1302, 1353, 1456, 1482, 1494
MunI CAATTG 1 cut(s) 889
Mva1269I GAATGC 3 cut(s) 616, 997, 1140
MvaI CCWGG 7 cut(s) 1062, 1158, 1302, 1353, 1456, 1482, 1494
MvnI CGCG 1 cut(s) 1440
MwoI GCNNNNNNNGC 6 cut(s) 613, 1073, 1274, 1401, 1777, 1791
NdeI CATATG 1 cut(s) 541
NdeII GATC 9 cut(s) 106, 723, 796, 1111, 1183, 1270, 1369, 1489, 1744
NlaIII CATG 6 cut(s) 170, 205, 413, 536, 611, 689
NlaIV GGNNCC 4 cut(s) 1066, 1350, 1382, 1604
NmuCI GTSAC 1 cut(s) 535
NspI RCATGY 3 cut(s) 205, 536, 611
OliI CACNNNNGTG 1 cut(s) 69
PaeI GCATGC 2 cut(s) 205, 611
PceI AGGCCT 1 cut(s) 1060
PciSI GCTCTTC 1 cut(s) 687
PctI GAATGC 3 cut(s) 616, 997, 1140
PfeI GAWTC 9 cut(s) 5, 41, 209, 242, 437, 635, 653, 758, 1626
PfoI TCCNGGA 2 cut(s) 1300, 1351
PkrI GCNGC 2 cut(s) 470, 946
PleI GAGTC 2 cut(s) 553, 1685
PpsI GAGTC 2 cut(s) 553, 1685
PpuMI RGGWCCY 1 cut(s) 1602
Psp5II RGGWCCY 1 cut(s) 1602
Psp6I CCWGG 7 cut(s) 1060, 1156, 1300, 1351, 1454, 1480, 1492
PspEI GGTNACC 1 cut(s) 1148
PspGI CCWGG 7 cut(s) 1060, 1156, 1300, 1351, 1454, 1480, 1492
PspN4I GGNNCC 4 cut(s) 1066, 1350, 1382, 1604
PspPI GGNCC 4 cut(s) 430, 1452, 1475, 1602
PspPPI RGGWCCY 1 cut(s) 1602
PstNI CAGNNNCTG 1 cut(s) 1418
PsuI RGATCY 2 cut(s) 106, 1369
PvuII CAGCTG 2 cut(s) 947, 1037
RsaI GTAC 2 cut(s) 445, 1702
RsaNI GTAC 2 cut(s) 444, 1701
RseI CAYNNNNRTG 3 cut(s) 69, 171, 414
SapI GCTCTTC 1 cut(s) 687
SaqAI TTAA 6 cut(s) 90, 450, 489, 1055, 1128, 1224
SatI GCNGC 2 cut(s) 469, 945
Sau3AI GATC 9 cut(s) 106, 723, 796, 1111, 1183, 1270, 1369, 1489, 1744
Sau96I GGNCC 4 cut(s) 430, 1452, 1475, 1602
ScaI AGTACT 1 cut(s) 1702
SchI GAGTC 2 cut(s) 554, 1685
ScrFI CCNGG 7 cut(s) 1062, 1158, 1302, 1353, 1456, 1482, 1494
SduI GDGCHC 5 cut(s) 66, 789, 961, 1069, 1351
SfaNI GCATC 5 cut(s) 331, 862, 1063, 1441, 1789
SinI GGWCC 3 cut(s) 430, 1452, 1602
SmiMI CAYNNNNRTG 3 cut(s) 69, 171, 414
SmlI CTYRAG 3 cut(s) 630, 835, 971
SmoI CTYRAG 3 cut(s) 630, 835, 971
SphI GCATGC 2 cut(s) 205, 611
SseBI AGGCCT 1 cut(s) 1060
SsiI CCGC 7 cut(s) 104, 468, 710, 827, 845, 1438, 1792
SspI AATATT 1 cut(s) 766
SspMI CTAG 7 cut(s) 498, 561, 996, 1166, 1377, 1509, 1772
StuI AGGCCT 1 cut(s) 1060
StyD4I CCNGG 7 cut(s) 1060, 1156, 1300, 1351, 1454, 1480, 1492
StyI CCWWGG 2 cut(s) 282, 1121
TaiI ACGT 2 cut(s) 707, 985
TaqI TCGA 3 cut(s) 51, 726, 1071
TaqII GACCGA 1 cut(s) 11
TatI WGTACW 1 cut(s) 1700
TauI GCSGC 1 cut(s) 471
TfiI GAWTC 9 cut(s) 5, 41, 209, 242, 437, 635, 653, 758, 1626
Tru1I TTAA 6 cut(s) 90, 450, 489, 1055, 1128, 1224
Tru9I TTAA 6 cut(s) 90, 450, 489, 1055, 1128, 1224
TscAI CASTG 3 cut(s) 534, 599, 961
TseFI GTSAC 1 cut(s) 535
TseI GCWGC 1 cut(s) 944
Tsp45I GTSAC 1 cut(s) 535
TspGWI ACGGA 2 cut(s) 754, 1099
TspRI CASTG 3 cut(s) 534, 599, 961
VpaK11BI GGWCC 3 cut(s) 430, 1452, 1602
XagI CCTNNNNNAGG 1 cut(s) 1597
XapI RAATTY 3 cut(s) 13, 1027, 1295
XbaI TCTAGA 1 cut(s) 1165
XceI RCATGY 3 cut(s) 205, 536, 611
XmiI GTMKAC 1 cut(s) 352
XspI CTAG 7 cut(s) 498, 561, 996, 1166, 1377, 1509, 1772
ZraI GACGTC 1 cut(s) 705
ZrmI AGTACT 1 cut(s) 1702
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.