Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr09

Orthogroup ID

OG0010726

Physical Location & Seq

Genomic Coordinates Reverse (-)

5816257 .. 5819342

Gene Structure 3086 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD09G1083100.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1971 bp

ATGGACCCTCGCCGGCCCCCGCGCACGGTCAGTGACCCCAAGGTCCGACAAGTCGGCTTCTTCGCCTCGCCCGAGCCCATAGCCTACTCCTCCTCTCCTCCCGTCTCCGGCATCTCTACTTCCGGTAACTCCCTCTCTCCGGTAATGATCCCCCCGCCGCGTCACTCCTCCGACACCACCCGTCCGGTTCTTTTCGCACCCTCCTCGGCCCGTCGAGAGTCCATACTCGCCGGGAGTTACAACAACTCTTCTGAGTTCTTCCCCGCCTCGCCTCCTACTGCTTCGTCGTCGAACGGAATCGTGATGGGGAATGGCGAGTTCCTAACCGACGTCGTTATGTCACCGGGTCGAGCATTCAGAGGGGTAAGAACCGCTGCGGGTTTGACGACGTCGTCTTCGTTTCCTGGTCGAGGGTTCGATCTGACGGCTGCCGTGAAGGCGAGTAGCGTCCCCGCCAGTGGGTTGATGACGGTCTCCGTGGTCAAGTTGCCTTCTGGGATTTCTGAGAAAGATGTTGATGCGTCAGTGGAAGTGCAAAGCGAGCGAGCTGCAAATTCGAAGCCACTGAAGGAGAAAACCACAAAAGCCGAAAGGCGGGCTGTTCAGGAAGCTCAACGAGCAGCTAAGGCTGCCTCAAAAGCTGAAGGAGGTAAAACACCTTCTGTTGCTGCTTCTGCTTCGGCAGCAGCAAATGTGAAACCGCCTAAAGCCACGAAACTCGTGTCACAATCATCTGTGGCGGTATCTGAGAAGACGGGTGGTGGCGGAGGTGGTGGCAGTGAACATCTGCCGGAGAAAGAGAGGAAGAAAGAAGTTCCTCATCCGCGAATGCAATATGATGATACAAGTCGTGTGGAGAAGGCGAAAAGGCGTTCAGTGGTCAAGCAAACTGAGGCCAGGAACAGGGTTGAGTTGTTCAGGCATTTGCCTCAATACGAGCATGGAACTCAGCTTCCTGATCTCGAGTCTAAGTTTTTCCAACTTGATCCTGTGCATCCTGCTGTTTATAAGGTTGGCTTACAGTATTTATCAGGAGATATATCGGGTGGCAATGCTCGTTGTATTGCCATGCTTTTGGCATTTCAGGAGGCCATTAAAGACTATTCAACACCACCAGAGAAAAACCTCAGTAGGGATTTGACAGCAAAAATAAGTAGTTATGTTTCATTTTTTAGTGACTGCAGGCCGCTTTCAATCACCATGGGGAATGCAATGCGGTTTCTAAAGAGCCGAATTGCCAAGCTACCTTTGACTATGTCCGAGTCAGAAGCAAAAGCATCTCTCCAGTCAGATATTGAACGGTTCATATCCGAGAAGATCATACTTGCTGATAAAGTGATAGTCAAGCATGCAGTTAGCAAAATCAGGGATGGTGATGTTCTTCTAACGTACGGGTCATCCTCTGCAGTTGAAATGTTGCTTTTACATGCCCATGAGCTTGGCAAACAGTTTCGTGTTGTGGTGGTAGACTCTCGTCCAAAGCTTGAAGGACAGCGTTTACTTCGTAGGTTGGTGGGAAAGGGCCTCAGCTGTACTTACACTCATATAAATGCTGCTTCGTGTATCATGCATGAGGTTACTCGAGTTTTTCTAGGTGCTTCTTCAGTGCTGTCCAATGGAACAGTTTACTCAAGGGTTGGCACTGCTTGTGTTGCTATGGTAGCACATGCATTCCATGTACCGGTATTAGTATGTTGTGAGGCATATAAATTTCACGAAAGGGTACAACTTGATTCCATCTGCTGTAACGAGCTCGGTGATCCCGATGTCATTTTAAAGGTTCCTGGTAGAAAGGAAGGCAATCCTTTGGATGGACACTCGAATTGTGAAAATATTCAACCTCTGAATTTGATTTATGATGCAGTCCCTTCAGATTACATTTCAATGATAATCACGGATTACGGCATGGTTCCACCCACAAGTGTGCCCGTCATTGTGCGCGAATACAGAAGAGAACACTTGTGGATGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0001541 GO:0002253 GO:0002376 GO:0002429 GO:0002682 GO:0002684 GO:0002757 GO:0002764 GO:0002768 GO:0003006 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005851 GO:0006412 GO:0006413 GO:0006518 GO:0006807 GO:0007154 GO:0007165 GO:0007166 GO:0007272 GO:0007275 GO:0007399 GO:0007417 GO:0007548 GO:0008150 GO:0008152 GO:0008366 GO:0008406 GO:0008585 GO:0009058 GO:0009059 GO:0009987 GO:0010001 GO:0010467 GO:0014003 GO:0019538 GO:0021782 GO:0022008 GO:0022414 GO:0023052 GO:0030154 GO:0032501 GO:0032502 GO:0032991 GO:0034641 GO:0034645 GO:0042063 GO:0042552 GO:0043043 GO:0043170 GO:0043603 GO:0043604 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044267 GO:0044271 GO:0044424 GO:0044444 GO:0044464 GO:0045137 GO:0046545 GO:0046660 GO:0048468 GO:0048513 GO:0048518 GO:0048583 GO:0048584 GO:0048608 GO:0048709 GO:0048731 GO:0048856 GO:0048869 GO:0050776 GO:0050778 GO:0050789 GO:0050794 GO:0050851 GO:0050852 GO:0050896 GO:0051716 GO:0061458 GO:0065007 GO:0071704 GO:1901564 GO:1901566 GO:1901576

KEGG Pathways

Metabolic & Signaling

ko03013 map03013

Pfam Domains

Protein Families

IF-2B

Protein Analysis

657

Amino Acids

70.92

Weight (kDa)

9.31

Isoelectric Point (pI)

47.91

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
IF-2B	PF01008	347 - 639	5.4e-75	Initiation factor 2 subunit family

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0010726)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G44070 AT5G38640
fragaria_vesca	FvH4_6g45430
malus_domestica	MD09G1083100.v1.1 MD17G1073400.v1.1
prunus_persica	Prupe.3G240400_v2.0.a1 Prupe.3G240400_v2.0.a1
pyrus_communis	pycom17g07430
rosa_chinensis	RchiOBHm_Chr2g0163261
rosa_laevigata	RLG00000021386
rosa_multiflora	Rmu_sc0002045.1_g000009
rosa_roxburghii	Rroxscaffold_2G00087430
rosa_rugosa	Rorug02G0501700 Rorug02G0501800 Rorug02G0501900
rosa_samantha	Rh2AG568600 Rh2BG580700 Rh2CG550300 Rh2DG590600
rosa_wichuraiana	Rw2G047040

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1008
AasI	GACNNNNNNGTC	2 cut(s)	41, 391
AatII	GACGTC	2 cut(s)	333, 392
AccI	GTMKAC	1 cut(s)	1467
AccII	CGCG	4 cut(s)	22, 160, 826, 1941
AclWI	GGATC	3 cut(s)	142, 980, 1754
AcsI	RAATTY	3 cut(s)	553, 1709, 1846
AcuI	CTGAAG	4 cut(s)	587, 663, 1587, 1854
AcyI	GRCGYC	2 cut(s)	330, 389
AfaI	GTAC	4 cut(s)	1391, 1534, 1680, 1725
AgeI	ACCGGT	1 cut(s)	1681
AgsI	TTSAA	7 cut(s)	1107, 1194, 1298, 1412, 1487, 1838, 1884
AjnI	CCWGG	3 cut(s)	403, 896, 1783
AleI	CACNNNNGTG	1 cut(s)	1922
AloI	GAACNNNNNNTCC	2 cut(s)	937, 969
Alw21I	GWGCWC	1 cut(s)	1755
Alw26I	GTCTC	2 cut(s)	109, 478
AlwI	GGATC	3 cut(s)	142, 980, 1754
Ama87I	CYCGRG	3 cut(s)	71, 962, 1581
AoxI	GGCC	6 cut(s)	14, 207, 894, 1089, 1184, 1522
ApeKI	GCWGC	9 cut(s)	374, 428, 548, 620, 629, 668, 683, 686, 1553
ApoI	RAATTY	3 cut(s)	553, 1709, 1846
ArsI	GACNNNNNNTTYG	4 cut(s)	379, 411, 707, 739
AsiGI	ACCGGT	1 cut(s)	1681
Asp700I	GAANNNNTTC	1 cut(s)	1833
AspLEI	GCGC	2 cut(s)	24, 1941
AspS9I	GGNCC	5 cut(s)	4, 15, 43, 208, 1522
AsuC2I	CCSGG	2 cut(s)	232, 345
AsuHPI	GGTGA	4 cut(s)	333, 1189, 1385, 1769
AsuII	TTCGAA	1 cut(s)	557
AvaI	CYCGRG	3 cut(s)	71, 962, 1581
AvaII	GGWCC	2 cut(s)	4, 43
BaeGI	GKGCMC	1 cut(s)	1929
BanII	GRGCYC	2 cut(s)	78, 1755
BarI	GAAGNNNNNNTAC	2 cut(s)	643, 675
BauI	CACGAG	1 cut(s)	719
BbsI	GAAGAC	2 cut(s)	387, 758
Bbv12I	GWGCWC	1 cut(s)	1755
BbvCI	CCTCAGC	1 cut(s)	1526
BbvI	GCAGC	9 cut(s)	361, 415, 535, 616, 632, 655, 695, 698, 1540
BccI	CCATC	4 cut(s)	298, 1364, 1745, 1805
BceAI	ACGGC	3 cut(s)	416, 441, 1918
BcgI	CGANNNNNNTGC	4 cut(s)	186, 220, 530, 564
BciT130I	CCWGG	3 cut(s)	405, 898, 1785
BcnI	CCSGG	2 cut(s)	232, 345
BcoDI	GTCTC	2 cut(s)	109, 478
BfaI	CTAG	1 cut(s)	1592
BfmI	CTRYAG	2 cut(s)	1180, 1404
BglI	GCCNNNNNGGC	1 cut(s)	437
Bme1390I	CCNGG	5 cut(s)	232, 345, 405, 898, 1785
Bme18I	GGWCC	2 cut(s)	4, 43
BmeT110I	CYCGRG	3 cut(s)	71, 962, 1581
BmgT120I	GGNCC	5 cut(s)	4, 15, 43, 208, 1522
BmiI	GGNNCC	4 cut(s)	6, 17, 1782, 1911
BmrFI	CCNGG	5 cut(s)	232, 345, 405, 898, 1785
BmsI	GCATC	5 cut(s)	120, 508, 1003, 1286, 1849
BoxI	GACNNNNGTC	1 cut(s)	1473
BpiI	GAAGAC	2 cut(s)	387, 758
BpmI	CTGGAG	1 cut(s)	1268
Bpu10I	CCTNAGC	2 cut(s)	624, 1526
Bpu14I	TTCGAA	1 cut(s)	557
BpuEI	CTTGAG	1 cut(s)	1615
BpuMI	CCSGG	2 cut(s)	232, 345
BsaHI	GRCGYC	2 cut(s)	330, 389
BsaI	GGTCTC	1 cut(s)	478
BsaJI	CCNNGG	4 cut(s)	39, 204, 477, 1200
BsaWI	WCCGGW	4 cut(s)	122, 139, 184, 1681
Bse118I	RCCGGY	2 cut(s)	12, 1681
Bse1I	ACTGG	2 cut(s)	456, 1285
Bse3DI	GCAATG	2 cut(s)	1057, 1218
BseBI	CCWGG	3 cut(s)	405, 898, 1785
BseDI	CCNNGG	4 cut(s)	39, 204, 477, 1200
BseGI	GGATG	6 cut(s)	820, 994, 1375, 1397, 1816, 1971
BseMI	GCAATG	2 cut(s)	1057, 1218
BseMII	CTCAG	7 cut(s)	243, 495, 738, 882, 962, 1141, 1540
BseNI	ACTGG	2 cut(s)	456, 1285
BseRI	GAGGAG	5 cut(s)	79, 82, 87, 157, 193
BseSI	GKGCMC	1 cut(s)	1929
BseXI	GCAGC	9 cut(s)	361, 415, 535, 616, 632, 655, 695, 698, 1540
Bsh1236I	CGCG	4 cut(s)	22, 160, 826, 1941
BshFI	GGCC	6 cut(s)	16, 209, 896, 1091, 1186, 1524
BshTI	ACCGGT	1 cut(s)	1681
BsiHKAI	GWGCWC	1 cut(s)	1755
BsiHKCI	CYCGRG	3 cut(s)	71, 962, 1581
BsiSI	CCGG	9 cut(s)	13, 108, 123, 140, 185, 231, 344, 791, 1682
BsiWI	CGTACG	1 cut(s)	1389
BslFI	GGGAC	2 cut(s)	434, 1850
BsmAI	GTCTC	2 cut(s)	109, 478
BsmBI	CGTCTC	1 cut(s)	109
BsmFI	GGGAC	2 cut(s)	434, 1850
BsmI	GAATGC	4 cut(s)	353, 834, 1213, 1670
BsnI	GGCC	6 cut(s)	16, 209, 896, 1091, 1186, 1524
Bso31I	GGTCTC	1 cut(s)	478
BsoBI	CYCGRG	3 cut(s)	71, 962, 1581
Bsp119I	TTCGAA	1 cut(s)	557
Bsp1286I	GDGCHC	3 cut(s)	78, 1755, 1929
Bsp143I	GATC	6 cut(s)	147, 418, 958, 985, 1317, 1759
Bsp19I	CCATGG	1 cut(s)	1200
BspANI	GGCC	6 cut(s)	16, 209, 896, 1091, 1186, 1524
BspCNI	CTCAG	7 cut(s)	244, 496, 739, 883, 961, 1140, 1539
BspFNI	CGCG	4 cut(s)	22, 160, 826, 1941
BspLI	GGNNCC	4 cut(s)	6, 17, 1782, 1911
BspMAI	CTGCAG	2 cut(s)	1184, 1408
BspPI	GGATC	3 cut(s)	142, 980, 1754
BspT104I	TTCGAA	1 cut(s)	557
BspTNI	GGTCTC	1 cut(s)	478
BsrDI	GCAATG	2 cut(s)	1057, 1218
BsrFI	RCCGGY	2 cut(s)	12, 1681
BsrI	ACTGG	2 cut(s)	456, 1285
BssAI	RCCGGY	2 cut(s)	12, 1681
BssECI	CCNNGG	4 cut(s)	39, 204, 477, 1200
BssMI	GATC	6 cut(s)	147, 418, 958, 985, 1317, 1759
BssNI	GRCGYC	2 cut(s)	330, 389
BssSI	CACGAG	1 cut(s)	719
BssT1I	CCWWGG	2 cut(s)	39, 1200
Bst2BI	CACGAG	1 cut(s)	719
Bst2UI	CCWGG	3 cut(s)	405, 898, 1785
Bst4CI	ACNGT	6 cut(s)	28, 472, 1023, 1302, 1449, 1624
Bst6I	CTCTTC	2 cut(s)	253, 1945
BstACI	GRCGYC	2 cut(s)	330, 389
BstBI	TTCGAA	1 cut(s)	557
BstC8I	GCNNGC	6 cut(s)	14, 542, 546, 597, 1184, 1350
BstDEI	CTNAG	9 cut(s)	252, 504, 624, 747, 891, 948, 969, 1127, 1526
BstDSI	CCRYGG	2 cut(s)	477, 1200
BstENI	CCTNNNNNAGG	1 cut(s)	408
BstF5I	GGATG	6 cut(s)	820, 994, 1375, 1397, 1816, 1971
BstFNI	CGCG	4 cut(s)	22, 160, 826, 1941
BstHHI	GCGC	2 cut(s)	24, 1941
BstKTI	GATC	6 cut(s)	150, 421, 961, 988, 1320, 1762
BstMAI	GTCTC	2 cut(s)	109, 478
BstMBI	GATC	6 cut(s)	147, 418, 958, 985, 1317, 1759
BstNI	CCWGG	3 cut(s)	405, 898, 1785
BstNSI	RCATGY	3 cut(s)	1352, 1430, 1670
BstPAI	GACNNNNGTC	1 cut(s)	1473
BstSCI	CCNGG	5 cut(s)	230, 343, 403, 896, 1783
BstSFI	CTRYAG	2 cut(s)	1180, 1404
BstSLI	GKGCMC	1 cut(s)	1929
BstUI	CGCG	4 cut(s)	22, 160, 826, 1941
BstV1I	GCAGC	9 cut(s)	361, 415, 535, 616, 632, 655, 695, 698, 1540
BstV2I	GAAGAC	2 cut(s)	387, 758
BstXI	CCANNNNNNTGG	2 cut(s)	1075, 1439
BsuRI	GGCC	6 cut(s)	16, 209, 896, 1091, 1186, 1524
BtgI	CCRYGG	2 cut(s)	477, 1200
BtsCI	GGATG	6 cut(s)	820, 994, 1375, 1397, 1816, 1971
BtsI	GCAGTG	2 cut(s)	784, 1641
BtsIMutI	CAGTG	8 cut(s)	37, 463, 531, 563, 784, 882, 1611, 1641
Cac8I	GCNNGC	6 cut(s)	14, 542, 546, 597, 1184, 1350
CfoI	GCGC	2 cut(s)	24, 1941
Cfr10I	RCCGGY	2 cut(s)	12, 1681
Cfr13I	GGNCC	5 cut(s)	4, 15, 43, 208, 1522
CseI	GACGC	3 cut(s)	149, 436, 510
Csp6I	GTAC	4 cut(s)	1390, 1533, 1679, 1724
CspAI	ACCGGT	1 cut(s)	1681
CspCI	CAANNNNNGTGG	2 cut(s)	834, 869
CviQI	GTAC	4 cut(s)	1390, 1533, 1679, 1724
DdeI	CTNAG	9 cut(s)	252, 504, 624, 747, 891, 948, 969, 1127, 1526
DpnI	GATC	6 cut(s)	149, 420, 960, 987, 1319, 1761
DpnII	GATC	6 cut(s)	147, 418, 958, 985, 1317, 1759
DraI	TTTAAA	1 cut(s)	1776
DrdI	GACNNNNNNGTC	2 cut(s)	41, 391
DseDI	GACNNNNNNGTC	2 cut(s)	41, 391
Eam1104I	CTCTTC	2 cut(s)	253, 1945
EarI	CTCTTC	2 cut(s)	253, 1945
EciI	GGCGGA	1 cut(s)	780
Ecl136II	GAGCTC	1 cut(s)	1753
Eco130I	CCWWGG	2 cut(s)	39, 1200
Eco24I	GRGCYC	2 cut(s)	78, 1755
Eco31I	GGTCTC	1 cut(s)	478
Eco47I	GGWCC	2 cut(s)	4, 43
Eco53kI	GAGCTC	1 cut(s)	1753
Eco57I	CTGAAG	4 cut(s)	587, 663, 1587, 1854
Eco88I	CYCGRG	3 cut(s)	71, 962, 1581
EcoICRI	GAGCTC	1 cut(s)	1753
EcoNI	CCTNNNNNAGG	1 cut(s)	408
EcoO109I	RGGNCCY	1 cut(s)	1522
EcoRII	CCWGG	3 cut(s)	403, 896, 1783
EcoT14I	CCWWGG	2 cut(s)	39, 1200
EcoT22I	ATGCAT	2 cut(s)	1572, 1672
EcoT38I	GRGCYC	2 cut(s)	78, 1755
ErhI	CCWWGG	2 cut(s)	39, 1200
Esp3I	CGTCTC	1 cut(s)	109
FalI	AAGNNNNNCTT	2 cut(s)	1001, 1033
FaqI	GGGAC	2 cut(s)	434, 1850
FauI	CCCGC	6 cut(s)	27, 162, 271, 370, 460, 588
FblI	GTMKAC	1 cut(s)	1467
FokI	GGATG	5 cut(s)	807, 981, 1382, 1384, 1823
FriOI	GRGCYC	2 cut(s)	78, 1755
FspBI	CTAG	1 cut(s)	1592
GlaI	GCGC	2 cut(s)	23, 1940
GsuI	CTGGAG	1 cut(s)	1268
HaeIII	GGCC	6 cut(s)	16, 209, 896, 1091, 1186, 1524
HapII	CCGG	9 cut(s)	13, 108, 123, 140, 185, 231, 344, 791, 1682
HgaI	GACGC	3 cut(s)	149, 436, 510
HhaI	GCGC	2 cut(s)	24, 1941
Hin1I	GRCGYC	2 cut(s)	330, 389
Hin6I	GCGC	2 cut(s)	22, 1939
HinP1I	GCGC	2 cut(s)	22, 1939
HindIII	AAGCTT	1 cut(s)	1481
HinfI	GANTC	6 cut(s)	218, 297, 965, 1262, 1469, 1733
HpaII	CCGG	9 cut(s)	13, 108, 123, 140, 185, 231, 344, 791, 1682
HphI	GGTGA	4 cut(s)	333, 1189, 1385, 1769
Hpy166II	GTNNAC	4 cut(s)	782, 1468, 1499, 1627
Hpy188III	TCNNGA	9 cut(s)	215, 301, 605, 956, 962, 1032, 1085, 1715, 1763
Hpy8I	GTNNAC	4 cut(s)	782, 1468, 1499, 1627
Hpy99I	CGWCG	7 cut(s)	216, 289, 292, 332, 335, 391, 394
HpyAV	CCTTC	9 cut(s)	430, 501, 562, 638, 669, 853, 1481, 1790, 1878
HpyCH4III	ACNGT	6 cut(s)	28, 472, 1023, 1302, 1449, 1624
HpyCH4IV	ACGT	3 cut(s)	330, 389, 1388
HpyF3I	CTNAG	9 cut(s)	252, 504, 624, 747, 891, 948, 969, 1127, 1526
HpySE526I	ACGT	3 cut(s)	330, 389, 1388
Hsp92I	GRCGYC	2 cut(s)	330, 389
HspAI	GCGC	2 cut(s)	22, 1939
KroI	GCCGGC	1 cut(s)	12
KroNI	GCCGGC	1 cut(s)	14
Kzo9I	GATC	6 cut(s)	147, 418, 958, 985, 1317, 1759
Lsp1109I	GCAGC	9 cut(s)	361, 415, 535, 616, 632, 655, 695, 698, 1540
LweI	GCATC	5 cut(s)	120, 508, 1003, 1286, 1849
MaeI	CTAG	1 cut(s)	1592
MaeII	ACGT	3 cut(s)	330, 389, 1388
MaeIII	GTNAC	9 cut(s)	32, 125, 161, 236, 339, 723, 1175, 1576, 1745
MalI	GATC	6 cut(s)	149, 420, 960, 987, 1319, 1761
MboI	GATC	6 cut(s)	147, 418, 958, 985, 1317, 1759
MhlI	GDGCHC	3 cut(s)	78, 1755, 1929
MluCI	AATT	5 cut(s)	553, 1233, 1709, 1822, 1846
MlyI	GAGTC	4 cut(s)	227, 974, 1271, 1463
MmeI	TCCRAC	3 cut(s)	70, 195, 1003
Mph1103I	ATGCAT	2 cut(s)	1572, 1672
MroNI	GCCGGC	1 cut(s)	12
MroXI	GAANNNNTTC	1 cut(s)	1833
MseI	TTAA	2 cut(s)	1095, 1775
MslI	CAYNNNNRTG	4 cut(s)	1431, 1548, 1883, 1922
MspA1I	CMGCKG	2 cut(s)	374, 1530
MspI	CCGG	9 cut(s)	13, 108, 123, 140, 185, 231, 344, 791, 1682
MspR9I	CCNGG	5 cut(s)	232, 345, 405, 898, 1785
Mva1269I	GAATGC	4 cut(s)	353, 834, 1213, 1670
MvaI	CCWGG	3 cut(s)	405, 898, 1785
MvnI	CGCG	4 cut(s)	22, 160, 826, 1941
NaeI	GCCGGC	1 cut(s)	14
NciI	CCSGG	2 cut(s)	232, 345
NcoI	CCATGG	1 cut(s)	1200
NdeII	GATC	6 cut(s)	147, 418, 958, 985, 1317, 1759
NgoMIV	GCCGGC	1 cut(s)	12
NlaIV	GGNNCC	4 cut(s)	6, 17, 1782, 1911
NmeAIII	GCCGAG	1 cut(s)	185
NmuCI	GTSAC	5 cut(s)	32, 161, 339, 723, 1175
NsiI	ATGCAT	2 cut(s)	1572, 1672
NspI	RCATGY	3 cut(s)	1352, 1430, 1670
NspV	TTCGAA	1 cut(s)	557
OliI	CACNNNNGTG	1 cut(s)	1922
PaeI	GCATGC	1 cut(s)	1352
PaeR7I	CTCGAG	2 cut(s)	962, 1581
PcsI	WCGNNNNNNNCGW	3 cut(s)	69, 395, 1761
PctI	GAATGC	4 cut(s)	353, 834, 1213, 1670
PdiI	GCCGGC	1 cut(s)	14
PdmI	GAANNNNTTC	1 cut(s)	1833
PfeI	GAWTC	2 cut(s)	297, 1733
Pfl23II	CGTACG	1 cut(s)	1389
PflFI	GACNNNGTC	3 cut(s)	388, 391, 1255
PinAI	ACCGGT	1 cut(s)	1681
PleI	GAGTC	4 cut(s)	226, 973, 1270, 1463
PpsI	GAGTC	4 cut(s)	226, 973, 1270, 1463
PshAI	GACNNNNGTC	1 cut(s)	1473
PsiI	TTATAA	1 cut(s)	1008
Psp124BI	GAGCTC	1 cut(s)	1755
Psp6I	CCWGG	3 cut(s)	403, 896, 1783
PspGI	CCWGG	3 cut(s)	403, 896, 1783
PspLI	CGTACG	1 cut(s)	1389
PspN4I	GGNNCC	4 cut(s)	6, 17, 1782, 1911
PspPI	GGNCC	5 cut(s)	4, 15, 43, 208, 1522
PspXI	VCTCGAGB	1 cut(s)	1581
PstI	CTGCAG	2 cut(s)	1184, 1408
PsyI	GACNNNGTC	3 cut(s)	388, 391, 1255
PvuII	CAGCTG	1 cut(s)	1530
RsaI	GTAC	4 cut(s)	1391, 1534, 1680, 1725
RsaNI	GTAC	4 cut(s)	1390, 1533, 1679, 1724
RseI	CAYNNNNRTG	4 cut(s)	1431, 1548, 1883, 1922
SacI	GAGCTC	1 cut(s)	1755
SaqAI	TTAA	2 cut(s)	1095, 1775
Sau3AI	GATC	6 cut(s)	147, 418, 958, 985, 1317, 1759
Sau96I	GGNCC	5 cut(s)	4, 15, 43, 208, 1522
SchI	GAGTC	4 cut(s)	227, 974, 1271, 1463
ScrFI	CCNGG	5 cut(s)	232, 345, 405, 898, 1785
SduI	GDGCHC	3 cut(s)	78, 1755, 1929
SfaNI	GCATC	5 cut(s)	120, 508, 1003, 1286, 1849
SfcI	CTRYAG	2 cut(s)	1180, 1404
Sfr274I	CTCGAG	2 cut(s)	962, 1581
SfuI	TTCGAA	1 cut(s)	557
SinI	GGWCC	2 cut(s)	4, 43
SlaI	CTCGAG	2 cut(s)	962, 1581
SmiMI	CAYNNNNRTG	4 cut(s)	1431, 1548, 1883, 1922
SmlI	CTYRAG	3 cut(s)	962, 1581, 1630
SmoI	CTYRAG	3 cut(s)	962, 1581, 1630
SphI	GCATGC	1 cut(s)	1352
Sse9I	AATT	5 cut(s)	553, 1233, 1709, 1822, 1846
SspI	AATATT	1 cut(s)	1834
SspMI	CTAG	1 cut(s)	1592
SstI	GAGCTC	1 cut(s)	1755
StyD4I	CCNGG	5 cut(s)	230, 343, 403, 896, 1783
StyI	CCWWGG	2 cut(s)	39, 1200
TaaI	ACNGT	6 cut(s)	28, 472, 1023, 1302, 1449, 1624
TaiI	ACGT	3 cut(s)	333, 392, 1391
TaqI	TCGA	9 cut(s)	214, 290, 349, 409, 417, 557, 963, 1582, 1820
TasI	AATT	5 cut(s)	553, 1233, 1709, 1822, 1846
TatI	WGTACW	1 cut(s)	1532
TauI	GCSGC	2 cut(s)	160, 1189
TfiI	GAWTC	2 cut(s)	297, 1733
Tru1I	TTAA	2 cut(s)	1095, 1775
Tru9I	TTAA	2 cut(s)	1095, 1775
TscAI	CASTG	8 cut(s)	37, 463, 531, 570, 784, 882, 1611, 1648
TseFI	GTSAC	5 cut(s)	32, 161, 339, 723, 1175
TseI	GCWGC	9 cut(s)	374, 428, 548, 620, 629, 668, 683, 686, 1553
Tsp45I	GTSAC	5 cut(s)	32, 161, 339, 723, 1175
TspDTI	ATGAA	2 cut(s)	1155, 1294
TspGWI	ACGGA	3 cut(s)	309, 466, 1910
TspRI	CASTG	8 cut(s)	37, 463, 531, 570, 784, 882, 1611, 1648
Tth111I	GACNNNGTC	3 cut(s)	388, 391, 1255
VpaK11BI	GGWCC	2 cut(s)	4, 43
XagI	CCTNNNNNAGG	1 cut(s)	408
XapI	RAATTY	3 cut(s)	553, 1709, 1846
XceI	RCATGY	3 cut(s)	1352, 1430, 1670
XhoI	CTCGAG	2 cut(s)	962, 1581
XmiI	GTMKAC	1 cut(s)	1467
XmnI	GAANNNNTTC	1 cut(s)	1833
XspI	CTAG	1 cut(s)	1592
ZraI	GACGTC	2 cut(s)	331, 390
Zsp2I	ATGCAT	2 cut(s)	1572, 1672

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.