Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000002

Orthogroup ID

OG0010726

Physical Location & Seq

Genomic Coordinates Reverse (-)

9478252 .. 9481327

Gene Structure 3076 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_2G00087430.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2016 bp

ATGGACCCACGGCGACCACCGCGCACCGTCAGCGACCCGAAGGTCCGCCAAGTCGGCTTCTTCGCCGCCCCGGAGCCCATCGCCTCCTCCCCTCCCGTCTCCGACATTTCCCCCTCCCGCAACTCCCTCTCTCCCGTCATGATCCCCCCGCCACGTCACTCCTCCGACGCCGCCCGTCCCGTTCTCTTCTCTCCCGTTCCCCCGGCCTCCCCCGGCCTCCGCGACTCCCTCGCCCCCTCCGACCTCTTCCCCGCCTCCTCCCCCACCGCCTCCTCTTCCTACGCCGACGCCGAGTTCGCTTCCTCCCCCGGCCGGCCGCTCCGGTCCAACTCGGTTCGCCCCGCTGCGGCCGTGACGACGTCGTCTTCGCTGCCCGGTAGAGGCTTCGATTTGACGGCCGCCGTGACGGCCAGTAGCGTCCCCGCCACTGGCTTGATGAAGATTCCTTCTGGATTTTCTGAGAAAGCTAGAAATGCATCAGTGGAAGTGGAGAATGAGCAAGGTTCGAATTCGAAGCCACTGAAGGAGAAGACCACCAAAGCCGAAAGGCGAGCGATTCAGGAGGCTCAGCGAGCAGCAAAGGCTGCTGCGAAAGATGAAGGAAAGGCAGCTTCTGTTGTAAGCGCTGCTGCGTCGGCTTCGGTGAATGTGAAACCACATAGGGCCACAAAAGCGCCCACTGTGGCGGCTTCTGAGAAGAAGGGTGGTGGCGGTGGTGGTGGTGAACGTCCGGTGGAGAAAGAAAGGAAGAAAGAGGTCCCTCCTCCACGGATGCAGTATGATGATACGAGTCGTGTGGAGAAGGCAAAAAGGCGTTCGGTGGTTAAGCAAACTGAGGCGAGGAACAGGGTTGAGCTGTTTAGGCATTTGCCTCAATACGAGCATGGAACTCAGCTTCCTGATCTCGAGTCTAGGTTTTTCCAACTTGACCCTGTGCATCCTGCAGTTTATAAGGTTGGGTTACAGTATTTAACTGGAGACATATCTGGTGGTAATGCTCGGTGCATTGCCATGCTTCAAGCTTTTCAGGAGGCCATTAAAGACTACTCAACACCACCTGAGAAAAACCTTAGTAGGGATTTGACAGCAAAAATTAGTAGTTATGTATCATTTTTAATTGAGTGCAGGCCCCTTTCAATCAGCATGGGGAATGCAATTAGGTTTCTAAAAAGTCGAATTGCCAAGCTACCTTTGACTCTGTCGGAGTCAGAGGCAAAAGCATCTCTCCAGTCTGATATTGAACAGTTCGTAACTGAGAAGATCATACTTGCAGATAAGGTGATAGTCAGGCATGCAGTTACAAAAATCAGGGATGGTGATGTTCTTCTAACGTATGGATCGTCCACTGCAGTTGAAATGTTATTATTACATGCCCATGAGCTTGGCAAACAATTTCGCGTAGTGGTTGTAGACTCTCGACCAAAGCTTGAAGGGCAACGTTTACTTCGTAGGTTGGTAGGAAAGGGGATTAGCTGTACTTACACTCATATAAATGCTACTTCCTACATCATGCATGAAGTTACTCGAGTTTTTCTAGGTGCTTCTTCAGTTCTGTCTAATGGAGCAGTTTACTCGAGGGTTGGGACTGCTTCTGTTGCTATGGTAGCTCATGCTTTCCGTGTTCCAGTATTAGTATGTTGTGAGGCATATAAGTTTCATGAAAGGGTACAGCTTGATTCAATTTGCTCTAATGAGCTCGGTGATCCAGATGTGATTTCAAAGGCTCCTGGTATGGAGGAAATCAATTGTTTGAATAATCAAGCTAATTGTGGAAATCTTCAACCTCTAAATCTGATTTATGACGCACTGCCTTCAGATTATGTTTCAATGATCATCACAGATTATGGCATGCCTGTGCATATTGTGAAGCCAGGTCATGGAAAGAACTGGATATTCTTAAAACTTATCACAACTCATGGCTCACGAGATTTGTTCCACCTACAAGCGTATCTGTCATTGTCCGGGAATACCGAAGAGAGCAGTTATGGATGTAATCCGTTCAGGTGCTTCGATTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0001541 GO:0002253 GO:0002376 GO:0002429 GO:0002682 GO:0002684 GO:0002757 GO:0002764 GO:0002768 GO:0003006 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005851 GO:0006412 GO:0006413 GO:0006518 GO:0006807 GO:0007154 GO:0007165 GO:0007166 GO:0007272 GO:0007275 GO:0007399 GO:0007417 GO:0007548 GO:0008150 GO:0008152 GO:0008366 GO:0008406 GO:0008585 GO:0009058 GO:0009059 GO:0009987 GO:0010001 GO:0010467 GO:0014003 GO:0019538 GO:0021782 GO:0022008 GO:0022414 GO:0023052 GO:0030154 GO:0032501 GO:0032502 GO:0032991 GO:0034641 GO:0034645 GO:0042063 GO:0042552 GO:0043043 GO:0043170 GO:0043603 GO:0043604 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044267 GO:0044271 GO:0044424 GO:0044444 GO:0044464 GO:0045137 GO:0046545 GO:0046660 GO:0048468 GO:0048513 GO:0048518 GO:0048583 GO:0048584 GO:0048608 GO:0048709 GO:0048731 GO:0048856 GO:0048869 GO:0050776 GO:0050778 GO:0050789 GO:0050794 GO:0050851 GO:0050852 GO:0050896 GO:0051716 GO:0061458 GO:0065007 GO:0071704 GO:1901564 GO:1901566 GO:1901576

KEGG Pathways

Metabolic & Signaling

ko03013 map03013

Pfam Domains

Protein Families

IF-2B

Protein Analysis

671

Amino Acids

72.67

Weight (kDa)

9.26

Isoelectric Point (pI)

51.24

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
IF-2B	PF01008	328 - 617	2.3e-76	Initiation factor 2 subunit family

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Orthologous Genes (Group: OG0010726)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G44070 AT5G38640
fragaria_vesca	FvH4_6g45430
malus_domestica	MD09G1083100.v1.1 MD17G1073400.v1.1
prunus_persica	Prupe.3G240400_v2.0.a1 Prupe.3G240400_v2.0.a1
pyrus_communis	pycom17g07430
rosa_chinensis	RchiOBHm_Chr2g0163261
rosa_laevigata	RLG00000021386
rosa_multiflora	Rmu_sc0002045.1_g000009
rosa_roxburghii	Rroxscaffold_2G00087430
rosa_rugosa	Rorug02G0501700 Rorug02G0501800 Rorug02G0501900
rosa_samantha	Rh2AG568600 Rh2BG580700 Rh2CG550300 Rh2DG590600
rosa_wichuraiana	Rw2G047040

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	951
AasI	GACNNNNNNGTC	2 cut(s)	41, 361
AatII	GACGTC	1 cut(s)	362
AccB7I	CCANNNNNTGG	1 cut(s)	1877
AccBSI	CCGCTC	1 cut(s)	319
AccI	GTMKAC	1 cut(s)	1410
AccII	CGCG	3 cut(s)	22, 222, 1398
AclI	AACGTT	1 cut(s)	1438
AclWI	GGATC	3 cut(s)	136, 1345, 1697
AcoI	YGGCCR	5 cut(s)	310, 314, 348, 396, 408
AcsI	RAATTY	1 cut(s)	508
AcuI	CTGAAG	3 cut(s)	542, 1530, 1797
AcyI	GRCGYC	3 cut(s)	168, 288, 359
AfaI	GTAC	2 cut(s)	1477, 1668
AfeI	AGCGCT	1 cut(s)	625
AfiI	CCNNNNNNNGG	6 cut(s)	312, 346, 380, 428, 1075, 1877
AjiI	CACGTC	1 cut(s)	155
AjnI	CCWGG	2 cut(s)	1726, 1870
AloI	GAACNNNNNNTCC	2 cut(s)	880, 912
Alw21I	GWGCWC	1 cut(s)	1698
Alw26I	GTCTC	2 cut(s)	103, 972
AlwI	GGATC	3 cut(s)	136, 1345, 1697
AlwNI	CAGNNNCTG	1 cut(s)	614
Ama87I	CYCGRG	3 cut(s)	905, 1524, 1573
Aor51HI	AGCGCT	1 cut(s)	625
ApeKI	GCWGC	8 cut(s)	344, 370, 575, 584, 587, 608, 626, 629
ApoI	RAATTY	1 cut(s)	508
ArsI	GACNNNNNNTTYG	4 cut(s)	278, 310, 349, 381
AspLEI	GCGC	3 cut(s)	24, 626, 676
AspS9I	GGNCC	6 cut(s)	4, 43, 324, 663, 757, 1128
AsuC2I	CCSGG	6 cut(s)	71, 203, 213, 309, 375, 1963
AsuHPI	GGTGA	5 cut(s)	655, 734, 1291, 1328, 1712
AsuII	TTCGAA	2 cut(s)	506, 512
AvaI	CYCGRG	3 cut(s)	905, 1524, 1573
AvaII	GGWCC	4 cut(s)	4, 43, 324, 757
BaeI	ACNNNNGTAYC	2 cut(s)	1931, 1964
BanII	GRGCYC	2 cut(s)	78, 1698
BauI	CACGAG	1 cut(s)	1923
BbsI	GAAGAC	2 cut(s)	357, 536
Bbv12I	GWGCWC	1 cut(s)	1698
BbvI	GCAGC	8 cut(s)	331, 357, 571, 574, 587, 613, 616, 620
BccI	CCATC	2 cut(s)	86, 1307
BceAI	ACGGC	5 cut(s)	26, 335, 386, 411, 423
BcgI	CGANNNNNNTGC	2 cut(s)	1554, 1588
BciT130I	CCWGG	2 cut(s)	1728, 1872
BclI	TGATCA	1 cut(s)	1830
BcnI	CCSGG	6 cut(s)	71, 203, 213, 309, 375, 1963
BcoDI	GTCTC	2 cut(s)	103, 972
BfaI	CTAG	3 cut(s)	468, 912, 1535
BfmI	CTRYAG	2 cut(s)	942, 1347
BfoI	RGCGCY	2 cut(s)	627, 677
BglI	GCCNNNNNGGC	2 cut(s)	54, 407
BlpI	GCTNAGC	1 cut(s)	567
Bme1390I	CCNGG	8 cut(s)	71, 203, 213, 309, 375, 1728, 1872, 1963
Bme18I	GGWCC	4 cut(s)	4, 43, 324, 757
BmeT110I	CYCGRG	3 cut(s)	905, 1524, 1573
BmgBI	CACGTC	1 cut(s)	155
BmgT120I	GGNCC	6 cut(s)	4, 43, 324, 663, 757, 1128
BmiI	GGNNCC	5 cut(s)	6, 75, 759, 1130, 1725
BmrFI	CCNGG	8 cut(s)	71, 203, 213, 309, 375, 1728, 1872, 1963
BmsI	GCATC	4 cut(s)	485, 762, 946, 1229
BpiI	GAAGAC	2 cut(s)	357, 536
BpmI	CTGGAG	2 cut(s)	996, 1211
Bpu1102I	GCTNAGC	1 cut(s)	567
Bpu14I	TTCGAA	2 cut(s)	506, 512
BpuMI	CCSGG	6 cut(s)	71, 203, 213, 309, 375, 1963
BsaHI	GRCGYC	3 cut(s)	168, 288, 359
BsaJI	CCNNGG	6 cut(s)	8, 69, 201, 211, 307, 767
BsaWI	WCCGGW	2 cut(s)	321, 730
Bsc4I	CCNNNNNNNGG	6 cut(s)	312, 346, 380, 428, 1075, 1877
Bse118I	RCCGGY	1 cut(s)	312
Bse1I	ACTGG	6 cut(s)	411, 433, 979, 1228, 1625, 1892
Bse3DI	GCAATG	1 cut(s)	1005
BseBI	CCWGG	2 cut(s)	1728, 1872
BseDI	CCNNGG	6 cut(s)	8, 69, 201, 211, 307, 767
BseGI	GGATG	4 cut(s)	777, 937, 1318, 1994
BseLI	CCNNNNNNNGG	6 cut(s)	312, 346, 380, 428, 1075, 1877
BseMI	GCAATG	1 cut(s)	1005
BseMII	CTCAG	7 cut(s)	450, 581, 684, 825, 905, 1050, 1245
BseNI	ACTGG	6 cut(s)	411, 433, 979, 1228, 1625, 1892
BseRI	GAGGAG	5 cut(s)	76, 151, 247, 262, 753
BseX3I	CGGCCG	4 cut(s)	310, 314, 348, 396
BseXI	GCAGC	8 cut(s)	331, 357, 571, 574, 587, 613, 616, 620
BsgI	GTGCAG	1 cut(s)	1144
Bsh1236I	CGCG	3 cut(s)	22, 222, 1398
Bsh1285I	CGRYCG	4 cut(s)	313, 317, 351, 399
BsiEI	CGRYCG	4 cut(s)	313, 317, 351, 399
BsiHKAI	GWGCWC	1 cut(s)	1698
BsiHKCI	CYCGRG	3 cut(s)	905, 1524, 1573
BsiSI	CCGG	9 cut(s)	71, 203, 213, 309, 313, 322, 375, 731, 1962
BslFI	GGGAC	4 cut(s)	162, 404, 743, 1597
BslI	CCNNNNNNNGG	6 cut(s)	312, 346, 380, 428, 1075, 1877
BsmAI	GTCTC	2 cut(s)	103, 972
BsmBI	CGTCTC	1 cut(s)	103
BsmFI	GGGAC	4 cut(s)	162, 404, 743, 1597
BsmI	GAATGC	1 cut(s)	1156
BsoBI	CYCGRG	3 cut(s)	905, 1524, 1573
Bsp119I	TTCGAA	2 cut(s)	506, 512
Bsp1286I	GDGCHC	2 cut(s)	78, 1698
Bsp143I	GATC	6 cut(s)	141, 901, 1260, 1337, 1702, 1830
Bsp1720I	GCTNAGC	1 cut(s)	567
BspCNI	CTCAG	7 cut(s)	451, 580, 685, 826, 904, 1051, 1246
BspFNI	CGCG	3 cut(s)	22, 222, 1398
BspHI	TCATGA	2 cut(s)	138, 1657
BspLI	GGNNCC	5 cut(s)	6, 75, 759, 1130, 1725
BspMAI	CTGCAG	2 cut(s)	946, 1351
BspPI	GGATC	3 cut(s)	136, 1345, 1697
BspT104I	TTCGAA	2 cut(s)	506, 512
BsrBI	CCGCTC	1 cut(s)	319
BsrDI	GCAATG	1 cut(s)	1005
BsrFI	RCCGGY	1 cut(s)	312
BsrI	ACTGG	6 cut(s)	411, 433, 979, 1228, 1625, 1892
BssAI	RCCGGY	1 cut(s)	312
BssECI	CCNNGG	6 cut(s)	8, 69, 201, 211, 307, 767
BssMI	GATC	6 cut(s)	141, 901, 1260, 1337, 1702, 1830
BssNI	GRCGYC	3 cut(s)	168, 288, 359
BssSI	CACGAG	1 cut(s)	1923
Bst2BI	CACGAG	1 cut(s)	1923
Bst2UI	CCWGG	2 cut(s)	1728, 1872
Bst4CI	ACNGT	4 cut(s)	28, 682, 966, 1245
Bst6I	CTCTTC	4 cut(s)	191, 251, 280, 1968
BstACI	GRCGYC	3 cut(s)	168, 288, 359
BstAPI	GCANNNNNTGC	1 cut(s)	584
BstBI	TTCGAA	2 cut(s)	506, 512
BstC8I	GCNNGC	6 cut(s)	314, 552, 573, 1127, 1293, 1850
BstDEI	CTNAG	8 cut(s)	459, 567, 693, 834, 891, 1059, 1070, 1254
BstDSI	CCRYGG	2 cut(s)	8, 767
BstF5I	GGATG	4 cut(s)	777, 937, 1318, 1994
BstFNI	CGCG	3 cut(s)	22, 222, 1398
BstH2I	RGCGCY	2 cut(s)	627, 677
BstHHI	GCGC	3 cut(s)	24, 626, 676
BstKTI	GATC	6 cut(s)	144, 904, 1263, 1340, 1705, 1833
BstMAI	GTCTC	2 cut(s)	103, 972
BstMBI	GATC	6 cut(s)	141, 901, 1260, 1337, 1702, 1830
BstMCI	CGRYCG	4 cut(s)	313, 317, 351, 399
BstNI	CCWGG	2 cut(s)	1728, 1872
BstNSI	RCATGY	3 cut(s)	1295, 1373, 1852
BstSCI	CCNGG	8 cut(s)	69, 201, 211, 307, 373, 1726, 1870, 1961
BstSFI	CTRYAG	2 cut(s)	942, 1347
BstUI	CGCG	3 cut(s)	22, 222, 1398
BstV1I	GCAGC	8 cut(s)	331, 357, 571, 574, 587, 613, 616, 620
BstV2I	GAAGAC	2 cut(s)	357, 536
BstXI	CCANNNNNNTGG	1 cut(s)	1382
BstZI	CGGCCG	4 cut(s)	310, 314, 348, 396
BtgI	CCRYGG	2 cut(s)	8, 767
BtgZI	GCGATG	1 cut(s)	64
BtrI	CACGTC	1 cut(s)	155
BtsCI	GGATG	4 cut(s)	777, 937, 1318, 1994
BtsI	GCAGTG	2 cut(s)	1344, 1805
BtsIMutI	CAGTG	6 cut(s)	426, 486, 518, 678, 1344, 1805
Cac8I	GCNNGC	6 cut(s)	314, 552, 573, 1127, 1293, 1850
CaiI	CAGNNNCTG	1 cut(s)	614
CciI	TCATGA	2 cut(s)	138, 1657
CfoI	GCGC	3 cut(s)	24, 626, 676
Cfr10I	RCCGGY	1 cut(s)	312
Cfr13I	GGNCC	6 cut(s)	4, 43, 324, 663, 757, 1128
CseI	GACGC	5 cut(s)	176, 296, 406, 621, 1811
Csp6I	GTAC	2 cut(s)	1476, 1667
CspCI	CAANNNNNGTGG	2 cut(s)	1333, 1368
CviQI	GTAC	2 cut(s)	1476, 1667
DdeI	CTNAG	8 cut(s)	459, 567, 693, 834, 891, 1059, 1070, 1254
DpnI	GATC	6 cut(s)	143, 903, 1262, 1339, 1704, 1832
DpnII	GATC	6 cut(s)	141, 901, 1260, 1337, 1702, 1830
DrdI	GACNNNNNNGTC	2 cut(s)	41, 361
DseDI	GACNNNNNNGTC	2 cut(s)	41, 361
EaeI	YGGCCR	5 cut(s)	310, 314, 348, 396, 408
EagI	CGGCCG	4 cut(s)	310, 314, 348, 396
Eam1104I	CTCTTC	4 cut(s)	191, 251, 280, 1968
EarI	CTCTTC	4 cut(s)	191, 251, 280, 1968
EciI	GGCGGA	1 cut(s)	35
Ecl136II	GAGCTC	1 cut(s)	1696
EclXI	CGGCCG	4 cut(s)	310, 314, 348, 396
Eco24I	GRGCYC	2 cut(s)	78, 1698
Eco47I	GGWCC	4 cut(s)	4, 43, 324, 757
Eco47III	AGCGCT	1 cut(s)	625
Eco52I	CGGCCG	4 cut(s)	310, 314, 348, 396
Eco53kI	GAGCTC	1 cut(s)	1696
Eco57I	CTGAAG	3 cut(s)	542, 1530, 1797
Eco88I	CYCGRG	3 cut(s)	905, 1524, 1573
EcoICRI	GAGCTC	1 cut(s)	1696
EcoO109I	RGGNCCY	2 cut(s)	757, 1128
EcoRI	GAATTC	1 cut(s)	508
EcoRII	CCWGG	2 cut(s)	1726, 1870
EcoT22I	ATGCAT	2 cut(s)	478, 1515
EcoT38I	GRGCYC	2 cut(s)	78, 1698
Esp3I	CGTCTC	1 cut(s)	103
FaqI	GGGAC	4 cut(s)	162, 404, 743, 1597
FauI	CCCGC	5 cut(s)	125, 156, 259, 349, 430
FbaI	TGATCA	1 cut(s)	1830
FblI	GTMKAC	1 cut(s)	1410
FokI	GGATG	4 cut(s)	784, 924, 1325, 2001
FriOI	GRGCYC	2 cut(s)	78, 1698
FseI	GGCCGGCC	1 cut(s)	316
FspBI	CTAG	3 cut(s)	468, 912, 1535
GlaI	GCGC	3 cut(s)	23, 625, 675
GsuI	CTGGAG	2 cut(s)	996, 1211
HaeII	RGCGCY	2 cut(s)	627, 677
HapII	CCGG	9 cut(s)	71, 203, 213, 309, 313, 322, 375, 731, 1962
HgaI	GACGC	5 cut(s)	176, 296, 406, 621, 1811
HhaI	GCGC	3 cut(s)	24, 626, 676
Hin1I	GRCGYC	3 cut(s)	168, 288, 359
Hin6I	GCGC	3 cut(s)	22, 624, 674
HinP1I	GCGC	3 cut(s)	22, 624, 674
HindIII	AAGCTT	2 cut(s)	1020, 1424
HinfI	GANTC	9 cut(s)	224, 442, 556, 790, 908, 1195, 1205, 1412, 1676
HpaII	CCGG	9 cut(s)	71, 203, 213, 309, 313, 322, 375, 731, 1962
HphI	GGTGA	5 cut(s)	655, 734, 1291, 1328, 1712
Hpy166II	GTNNAC	5 cut(s)	725, 1344, 1411, 1442, 1570
Hpy8I	GTNNAC	5 cut(s)	725, 1344, 1411, 1442, 1570
Hpy99I	CGWCG	5 cut(s)	170, 290, 361, 364, 637
HpyAV	CCTTC	8 cut(s)	34, 456, 517, 593, 694, 796, 1424, 1821
HpyCH4III	ACNGT	4 cut(s)	28, 682, 966, 1245
HpyCH4IV	ACGT	5 cut(s)	154, 359, 727, 1331, 1438
HpyF3I	CTNAG	8 cut(s)	459, 567, 693, 834, 891, 1059, 1070, 1254
HpySE526I	ACGT	5 cut(s)	154, 359, 727, 1331, 1438
Hsp92I	GRCGYC	3 cut(s)	168, 288, 359
HspAI	GCGC	3 cut(s)	22, 624, 674
KroI	GCCGGC	1 cut(s)	312
KroNI	GCCGGC	1 cut(s)	314
Ksp22I	TGATCA	1 cut(s)	1830
Kzo9I	GATC	6 cut(s)	141, 901, 1260, 1337, 1702, 1830
LmnI	GCTCC	4 cut(s)	73, 324, 1562, 1729
Lsp1109I	GCAGC	8 cut(s)	331, 357, 571, 574, 587, 613, 616, 620
LweI	GCATC	4 cut(s)	485, 762, 946, 1229
MaeI	CTAG	3 cut(s)	468, 912, 1535
MaeII	ACGT	5 cut(s)	154, 359, 727, 1331, 1438
MaeIII	GTNAC	7 cut(s)	155, 352, 403, 960, 1249, 1297, 1519
MalI	GATC	6 cut(s)	143, 903, 1262, 1339, 1704, 1832
MbiI	CCGCTC	1 cut(s)	319
MboI	GATC	6 cut(s)	141, 901, 1260, 1337, 1702, 1830
MfeI	CAATTG	1 cut(s)	1744
MhlI	GDGCHC	2 cut(s)	78, 1698
MluCI	AATT	9 cut(s)	508, 1092, 1116, 1155, 1176, 1391, 1680, 1744, 1765
MlyI	GAGTC	6 cut(s)	218, 799, 917, 1189, 1214, 1406
MmeI	TCCRAC	6 cut(s)	126, 189, 264, 351, 946, 1182
Mph1103I	ATGCAT	2 cut(s)	478, 1515
MroNI	GCCGGC	1 cut(s)	312
MseI	TTAA	5 cut(s)	825, 971, 1038, 1115, 1898
MslI	CAYNNNNRTG	4 cut(s)	1010, 1374, 1491, 1853
MspA1I	CMGCKG	1 cut(s)	344
MspI	CCGG	9 cut(s)	71, 203, 213, 309, 313, 322, 375, 731, 1962
MspR9I	CCNGG	8 cut(s)	71, 203, 213, 309, 375, 1728, 1872, 1963
MunI	CAATTG	1 cut(s)	1744
Mva1269I	GAATGC	1 cut(s)	1156
MvaI	CCWGG	2 cut(s)	1728, 1872
MvnI	CGCG	3 cut(s)	22, 222, 1398
NaeI	GCCGGC	1 cut(s)	314
NciI	CCSGG	6 cut(s)	71, 203, 213, 309, 375, 1963
NdeII	GATC	6 cut(s)	141, 901, 1260, 1337, 1702, 1830
NgoMIV	GCCGGC	1 cut(s)	312
NlaIV	GGNNCC	5 cut(s)	6, 75, 759, 1130, 1725
NmeAIII	GCCGAG	1 cut(s)	316
NmuCI	GTSAC	3 cut(s)	155, 352, 403
NsiI	ATGCAT	2 cut(s)	478, 1515
NspI	RCATGY	3 cut(s)	1295, 1373, 1852
NspV	TTCGAA	2 cut(s)	506, 512
PaeI	GCATGC	2 cut(s)	1295, 1852
PaeR7I	CTCGAG	3 cut(s)	905, 1524, 1573
PagI	TCATGA	2 cut(s)	138, 1657
PcsI	WCGNNNNNNNCGW	4 cut(s)	237, 288, 1337, 1444
PctI	GAATGC	1 cut(s)	1156
PdiI	GCCGGC	1 cut(s)	314
PfeI	GAWTC	3 cut(s)	442, 556, 1676
PflFI	GACNNNGTC	3 cut(s)	358, 361, 1198
PflMI	CCANNNNNTGG	1 cut(s)	1877
PfoI	TCCNGGA	1 cut(s)	1961
PleI	GAGTC	6 cut(s)	218, 798, 916, 1189, 1213, 1406
PpsI	GAGTC	6 cut(s)	218, 798, 916, 1189, 1213, 1406
PpuMI	RGGWCCY	1 cut(s)	757
PsiI	TTATAA	1 cut(s)	951
Psp124BI	GAGCTC	1 cut(s)	1698
Psp1406I	AACGTT	1 cut(s)	1438
Psp5II	RGGWCCY	1 cut(s)	757
Psp6I	CCWGG	2 cut(s)	1726, 1870
PspGI	CCWGG	2 cut(s)	1726, 1870
PspN4I	GGNNCC	5 cut(s)	6, 75, 759, 1130, 1725
PspPI	GGNCC	6 cut(s)	4, 43, 324, 663, 757, 1128
PspPPI	RGGWCCY	1 cut(s)	757
PspXI	VCTCGAGB	2 cut(s)	1524, 1573
PstI	CTGCAG	2 cut(s)	946, 1351
PstNI	CAGNNNCTG	1 cut(s)	614
PsyI	GACNNNGTC	3 cut(s)	358, 361, 1198
RigI	GGCCGGCC	1 cut(s)	316
RsaI	GTAC	2 cut(s)	1477, 1668
RsaNI	GTAC	2 cut(s)	1476, 1667
RseI	CAYNNNNRTG	4 cut(s)	1010, 1374, 1491, 1853
SacI	GAGCTC	1 cut(s)	1698
SaqAI	TTAA	5 cut(s)	825, 971, 1038, 1115, 1898
Sau3AI	GATC	6 cut(s)	141, 901, 1260, 1337, 1702, 1830
Sau96I	GGNCC	6 cut(s)	4, 43, 324, 663, 757, 1128
SchI	GAGTC	6 cut(s)	218, 799, 917, 1189, 1214, 1406
ScrFI	CCNGG	8 cut(s)	71, 203, 213, 309, 375, 1728, 1872, 1963
SduI	GDGCHC	2 cut(s)	78, 1698
SfaNI	GCATC	4 cut(s)	485, 762, 946, 1229
SfcI	CTRYAG	2 cut(s)	942, 1347
Sfr274I	CTCGAG	3 cut(s)	905, 1524, 1573
SfuI	TTCGAA	2 cut(s)	506, 512
SinI	GGWCC	4 cut(s)	4, 43, 324, 757
SlaI	CTCGAG	3 cut(s)	905, 1524, 1573
SmiMI	CAYNNNNRTG	4 cut(s)	1010, 1374, 1491, 1853
SmlI	CTYRAG	3 cut(s)	905, 1524, 1573
SmoI	CTYRAG	3 cut(s)	905, 1524, 1573
SphI	GCATGC	2 cut(s)	1295, 1852
Sse9I	AATT	9 cut(s)	508, 1092, 1116, 1155, 1176, 1391, 1680, 1744, 1765
SspMI	CTAG	3 cut(s)	468, 912, 1535
SstI	GAGCTC	1 cut(s)	1698
StyD4I	CCNGG	8 cut(s)	69, 201, 211, 307, 373, 1726, 1870, 1961
TaaI	ACNGT	4 cut(s)	28, 682, 966, 1245
TaiI	ACGT	5 cut(s)	157, 362, 730, 1334, 1441
TaqI	TCGA	9 cut(s)	387, 506, 512, 906, 1174, 1417, 1525, 1574, 2010
TasI	AATT	9 cut(s)	508, 1092, 1116, 1155, 1176, 1391, 1680, 1744, 1765
TatI	WGTACW	1 cut(s)	1475
TauI	GCSGC	6 cut(s)	68, 173, 319, 350, 401, 689
TfiI	GAWTC	3 cut(s)	442, 556, 1676
Tru1I	TTAA	5 cut(s)	825, 971, 1038, 1115, 1898
Tru9I	TTAA	5 cut(s)	825, 971, 1038, 1115, 1898
TscAI	CASTG	6 cut(s)	433, 486, 525, 685, 1351, 1812
TseFI	GTSAC	3 cut(s)	155, 352, 403
TseI	GCWGC	8 cut(s)	344, 370, 575, 584, 587, 608, 626, 629
Tsp45I	GTSAC	3 cut(s)	155, 352, 403
TspDTI	ATGAA	5 cut(s)	452, 612, 1530, 1646, 1674
TspGWI	ACGGA	3 cut(s)	784, 1607, 1986
TspRI	CASTG	6 cut(s)	433, 486, 525, 685, 1351, 1812
Tth111I	GACNNNGTC	3 cut(s)	358, 361, 1198
Van91I	CCANNNNNTGG	1 cut(s)	1877
VpaK11BI	GGWCC	4 cut(s)	4, 43, 324, 757
XapI	RAATTY	1 cut(s)	508
XceI	RCATGY	3 cut(s)	1295, 1373, 1852
XhoI	CTCGAG	3 cut(s)	905, 1524, 1573
XmiI	GTMKAC	1 cut(s)	1410
XspI	CTAG	3 cut(s)	468, 912, 1535
ZraI	GACGTC	1 cut(s)	360
Zsp2I	ATGCAT	2 cut(s)	478, 1515

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.