MD09G1143400.v1.1

Belongs to the UDP-glycosyltransferase family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr09
OG0014775
Physical Location & Seq
Forward (+)
11181145 .. 11182817
1673 bp
Loading structure...
UTR
Exon/CDS
Intron
MD09G1143400.v1.1.491

Sequence Viewer

Length: 1080 bp
ATGTTCTGCACCACCATGATTGACGTAGCCAATGAGTTCAAGGTTCCATCTTATCTATTTTTCACTTCCGGGGCTGGTTTTCTAGGGCTTCTCCTCCACCTTCCGGGCCGGTATGACCGACTCGGCACATTTTTCAAACCATCAGACCCTGAGTCTGTTGTGCCGAGTTATGTCAACCCAGTTCCTGCAAATGTGCTTCCTTCGTTTGCTTACATGGACACCGGGTACAGTTGCTTTGCGAACCATGCTAGGAGGTTCAAGGAAACCAAGGGTATAGTCGTCAACACAATTTTTGAGCTGGAGTACCATGCGGTTGGCTCACTTTTGGATTGTGAGACTGAAATCCCTCCTGTTTACACGATGGGACCCTTGATTGGTGAGCATCATGTGCAGCCGTCTGATCGGGCCAAATTTGGAAAGATCATGACGTGGCTTGAAGATCAGCCTCCGAAATCAGTGGTGTTCCTCTGCTTTGGGAGCTTTGGAAGTTTTGATGAGGCCCAACTGAGAGAGATTGCGGTTGGATTAGAAAAGAGGGGTAAGAAATTCTTGTGGTCCGTACGGAAAACGCCACCTGCGGGCCAGTTTGTAATGCCAGGTGAGTACGCAAATCATGACAAGTTTTTGCCTCCAGGATTCTTGGAGAGGACCAAAGATGTTGGTATTTTGTGTGGTTGGGCCCCACAAGTGGAGGTCTTGGCCCACAGAGTGACTGGAGGGTTTGTGTCGCACTGTGGGTGGAACTCCATATTAGAGAGCTTGTGGCATGGTGTCCCTATTGTGACTTGGCCTGTGTCTGCAGAGCAGCAGATTAATGCCTCTCAGATGGTGAGGGATTTGGGACTGGCCGTGGAGCTGAGATTGGACTACAGAAGGGACGGTGGTAATCATTTTGTGGTGGCGGATGAGATCGAGAAGGCTGTGAGGTGTGTGATGGACGGTGATGGTGAGGTGAGGAAGAGGGTTGAGGAGATGAGTGAAGTGTGTAGGAAGGCTGTTGGAGATGGTGGATCTTCCTCTACTACGTTTCGACATTTGATTGAGGTTATGTTGGCAAGCCTTGACAAAAAGGAGGAATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
UDPGT

Protein Analysis

360

Amino Acids

40.03

Weight (kDa)

5.81

Isoelectric Point (pI)

42.0

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
UDPGT PF00201 150 - 286 4.5e-23 UDP-glucoronosyl and UDP-glucosyl transferase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0014775)

Species Orthologous Gene IDs
fragaria_vesca FvH4_6g39310 FvH4_6g39311 FvH4_6g39311
malus_domestica MD09G1142000.v1.1 MD09G1143400.v1.1
prunus_persica Prupe.3G184400_v2.0.a1
pyrus_communis pycom09g06230 pycom11g06430
rosa_chinensis RchiOBHm_Chr2g0153231
rosa_laevigata RLG00000020687
rosa_multiflora Rmu_sc0000442.1_g000004 Rmu_sc0000442.1_g000007
rosa_roxburghii Rroxscaffold_2G00095080
rosa_rugosa Rorug02G0437600
rosa_samantha Rh2AG500600 Rh2CG486900
rosa_wichuraiana Rw2G041090

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 583
Acc36I ACCTGC 1 cut(s) 583
AciI CCGC 4 cut(s) 311, 518, 578, 902
AclWI GGATC 1 cut(s) 1018
AcoI YGGCCR 1 cut(s) 846
AcsI RAATTY 2 cut(s) 410, 545
AdeI CACNNNGTG 1 cut(s) 709
AfaI GTAC 4 cut(s) 227, 305, 561, 605
AfiI CCNNNNNNNGG 4 cut(s) 103, 374, 578, 688
AgsI TTSAA 4 cut(s) 40, 136, 259, 437
AhdI GACNNNNNGTC 1 cut(s) 151
AjiI CACGTC 1 cut(s) 429
AjnI CCWGG 2 cut(s) 595, 631
AluBI AGCT 4 cut(s) 298, 480, 759, 856
AluI AGCT 4 cut(s) 298, 480, 759, 856
Alw26I GTCTC 1 cut(s) 329
AlwI GGATC 1 cut(s) 1018
AlwNI CAGNNNCTG 2 cut(s) 149, 185
AoxI GGCC 8 cut(s) 106, 405, 498, 580, 678, 699, 788, 846
ApaI GGGCCC 1 cut(s) 682
ApeKI GCWGC 2 cut(s) 391, 805
ApoI RAATTY 2 cut(s) 410, 545
AseI ATTAAT 1 cut(s) 813
AsuC2I CCSGG 3 cut(s) 70, 105, 223
AsuHPI GGTGA 6 cut(s) 389, 611, 841, 953, 959, 964
AvaII GGWCC 3 cut(s) 365, 555, 648
BaeGI GKGCMC 1 cut(s) 682
BanII GRGCYC 1 cut(s) 682
BbvI GCAGC 2 cut(s) 403, 817
BccI CCATC 7 cut(s) 55, 148, 355, 820, 928, 938, 998
BceAI ACGGC 2 cut(s) 379, 833
BciT130I CCWGG 2 cut(s) 597, 633
BcnI CCSGG 3 cut(s) 70, 105, 223
BcoDI GTCTC 1 cut(s) 329
BfaI CTAG 2 cut(s) 83, 249
BfmI CTRYAG 2 cut(s) 798, 868
BfuAI ACCTGC 1 cut(s) 583
BisI GCNGC 2 cut(s) 392, 806
BlsI GCNGC 2 cut(s) 393, 807
Bme1390I CCNGG 5 cut(s) 70, 105, 223, 597, 633
Bme18I GGWCC 3 cut(s) 365, 555, 648
BmeRI GACNNNNNGTC 1 cut(s) 151
BmgBI CACGTC 1 cut(s) 429
BmiI GGNNCC 5 cut(s) 45, 366, 367, 680, 681
BmrFI CCNGG 5 cut(s) 70, 105, 223, 597, 633
BmrI ACTGGG 1 cut(s) 173
BmsI GCATC 1 cut(s) 391
BmuI ACTGGG 1 cut(s) 173
BpmI CTGGAG 3 cut(s) 320, 615, 735
BpuMI CCSGG 3 cut(s) 70, 105, 223
BsaJI CCNNGG 3 cut(s) 69, 267, 849
BsaXI ACNNNNNCTCC 2 cut(s) 708, 738
Bsc4I CCNNNNNNNGG 4 cut(s) 103, 374, 578, 688
Bse118I RCCGGY 1 cut(s) 108
Bse1I ACTGG 4 cut(s) 179, 583, 718, 849
BseBI CCWGG 2 cut(s) 597, 633
BseDI CCNNGG 3 cut(s) 69, 267, 849
BseGI GGATG 1 cut(s) 910
BseLI CCNNNNNNNGG 4 cut(s) 103, 374, 578, 688
BseMII CTCAG 4 cut(s) 141, 497, 836, 848
BseNI ACTGG 4 cut(s) 179, 583, 718, 849
BseRI GAGGAG 2 cut(s) 83, 983
BseSI GKGCMC 1 cut(s) 682
BseXI GCAGC 2 cut(s) 403, 817
BsgI GTGCAG 1 cut(s) 410
BshFI GGCC 8 cut(s) 108, 407, 500, 582, 680, 701, 790, 848
BsiSI CCGG 4 cut(s) 69, 104, 109, 222
BsiWI CGTACG 1 cut(s) 559
BslFI GGGAC 4 cut(s) 378, 758, 855, 890
BslI CCNNNNNNNGG 4 cut(s) 103, 374, 578, 688
BsmAI GTCTC 1 cut(s) 329
BsmFI GGGAC 4 cut(s) 378, 758, 855, 890
BsnI GGCC 8 cut(s) 108, 407, 500, 582, 680, 701, 790, 848
Bsp120I GGGCCC 1 cut(s) 678
Bsp1286I GDGCHC 1 cut(s) 682
Bsp143I GATC 5 cut(s) 400, 420, 439, 909, 1010
BspACI CCGC 4 cut(s) 311, 518, 578, 902
BspANI GGCC 8 cut(s) 108, 407, 500, 582, 680, 701, 790, 848
BspCNI CTCAG 4 cut(s) 142, 498, 835, 849
BspHI TCATGA 2 cut(s) 423, 613
BspLI GGNNCC 5 cut(s) 45, 366, 367, 680, 681
BspMAI CTGCAG 1 cut(s) 802
BspMI ACCTGC 1 cut(s) 583
BspPI GGATC 1 cut(s) 1018
BsrFI RCCGGY 1 cut(s) 108
BsrI ACTGG 4 cut(s) 179, 583, 718, 849
BssAI RCCGGY 1 cut(s) 108
BssECI CCNNGG 3 cut(s) 69, 267, 849
BssMI GATC 5 cut(s) 400, 420, 439, 909, 1010
BssT1I CCWWGG 1 cut(s) 267
Bst2UI CCWGG 2 cut(s) 597, 633
Bst4CI ACNGT 4 cut(s) 230, 734, 881, 941
Bst6I CTCTTC 1 cut(s) 953
BstAPI GCANNNNNTGC 1 cut(s) 388
BstC8I GCNNGC 2 cut(s) 580, 1057
BstDEI CTNAG 4 cut(s) 150, 506, 822, 857
BstDSI CCRYGG 1 cut(s) 849
BstF5I GGATG 1 cut(s) 910
BstKTI GATC 5 cut(s) 403, 423, 442, 912, 1013
BstMAI GTCTC 1 cut(s) 329
BstMBI GATC 5 cut(s) 400, 420, 439, 909, 1010
BstMWI GCNNNNNNNGC 3 cut(s) 245, 388, 477
BstNI CCWGG 2 cut(s) 597, 633
BstSCI CCNGG 5 cut(s) 68, 103, 221, 595, 631
BstSFI CTRYAG 2 cut(s) 798, 868
BstSLI GKGCMC 1 cut(s) 682
BstV1I GCAGC 2 cut(s) 403, 817
BstX2I RGATCY 1 cut(s) 1010
BstXI CCANNNNNNTGG 1 cut(s) 314
BstYI RGATCY 1 cut(s) 1010
BsuRI GGCC 8 cut(s) 108, 407, 500, 582, 680, 701, 790, 848
BtgI CCRYGG 1 cut(s) 849
BtrI CACGTC 1 cut(s) 429
BtsCI GGATG 1 cut(s) 910
BtsIMutI CAGTG 2 cut(s) 462, 730
BveI ACCTGC 1 cut(s) 583
Cac8I GCNNGC 2 cut(s) 580, 1057
CaiI CAGNNNCTG 2 cut(s) 149, 185
CciI TCATGA 2 cut(s) 423, 613
Cfr10I RCCGGY 1 cut(s) 108
Csp6I GTAC 4 cut(s) 226, 304, 560, 604
CspCI CAANNNNNGTGG 1 cut(s) 36
CviAII CATG 8 cut(s) 16, 214, 245, 308, 386, 424, 614, 767
CviQI GTAC 4 cut(s) 226, 304, 560, 604
DdeI CTNAG 4 cut(s) 150, 506, 822, 857
DpnI GATC 5 cut(s) 402, 422, 441, 911, 1012
DpnII GATC 5 cut(s) 400, 420, 439, 909, 1010
DraIII CACNNNGTG 1 cut(s) 709
DriI GACNNNNNGTC 1 cut(s) 151
EaeI YGGCCR 1 cut(s) 846
Eam1104I CTCTTC 1 cut(s) 953
Eam1105I GACNNNNNGTC 1 cut(s) 151
EarI CTCTTC 1 cut(s) 953
EciI GGCGGA 1 cut(s) 917
Eco130I CCWWGG 1 cut(s) 267
Eco24I GRGCYC 1 cut(s) 682
Eco47I GGWCC 3 cut(s) 365, 555, 648
EcoO109I RGGNCCY 2 cut(s) 365, 679
EcoRII CCWGG 2 cut(s) 595, 631
EcoT14I CCWWGG 1 cut(s) 267
EcoT38I GRGCYC 1 cut(s) 682
ErhI CCWWGG 1 cut(s) 267
FaeI CATG 8 cut(s) 19, 217, 248, 311, 389, 427, 617, 770
FalI AAGNNNNNCTT 2 cut(s) 533, 565
FaqI GGGAC 4 cut(s) 378, 758, 855, 890
FatI CATG 8 cut(s) 15, 213, 244, 307, 385, 423, 613, 766
FauI CCCGC 1 cut(s) 571
Fnu4HI GCNGC 2 cut(s) 392, 806
FokI GGATG 1 cut(s) 917
FriOI GRGCYC 1 cut(s) 682
Fsp4HI GCNGC 2 cut(s) 392, 806
FspBI CTAG 2 cut(s) 83, 249
GluI GCNGC 2 cut(s) 392, 806
GsuI CTGGAG 3 cut(s) 320, 615, 735
HaeIII GGCC 8 cut(s) 108, 407, 500, 582, 680, 701, 790, 848
HapII CCGG 4 cut(s) 69, 104, 109, 222
Hin1II CATG 8 cut(s) 19, 217, 248, 311, 389, 427, 617, 770
HincII GTYRAC 2 cut(s) 175, 283
HindII GTYRAC 2 cut(s) 175, 283
HinfI GANTC 3 cut(s) 120, 152, 636
HpaII CCGG 4 cut(s) 69, 104, 109, 222
HphI GGTGA 6 cut(s) 389, 611, 841, 953, 959, 964
Hpy166II GTNNAC 3 cut(s) 175, 283, 355
Hpy188I TCNGA 4 cut(s) 145, 400, 450, 825
Hpy188III TCNNGA 3 cut(s) 424, 614, 913
Hpy8I GTNNAC 3 cut(s) 175, 283, 355
HpyAV CCTTC 5 cut(s) 110, 210, 867, 910, 985
HpyCH4III ACNGT 4 cut(s) 230, 734, 881, 941
HpyCH4IV ACGT 3 cut(s) 24, 428, 1025
HpyCH4V TGCA 4 cut(s) 9, 188, 391, 800
HpyF10VI GCNNNNNNNGC 3 cut(s) 245, 388, 477
HpyF3I CTNAG 4 cut(s) 150, 506, 822, 857
HpySE526I ACGT 3 cut(s) 24, 428, 1025
Hsp92II CATG 8 cut(s) 19, 217, 248, 311, 389, 427, 617, 770
KflI GGGWCCC 1 cut(s) 365
Kzo9I GATC 5 cut(s) 400, 420, 439, 909, 1010
LmnI GCTCC 2 cut(s) 477, 853
Lsp1109I GCAGC 2 cut(s) 403, 817
LweI GCATC 1 cut(s) 391
MaeI CTAG 2 cut(s) 83, 249
MaeII ACGT 3 cut(s) 24, 428, 1025
MaeIII GTNAC 2 cut(s) 709, 781
MalI GATC 5 cut(s) 402, 422, 441, 911, 1012
MboI GATC 5 cut(s) 400, 420, 439, 909, 1010
MboII GAAGA 3 cut(s) 449, 970, 1005
MflI RGATCY 1 cut(s) 1010
MhlI GDGCHC 1 cut(s) 682
MluCI AATT 3 cut(s) 288, 410, 545
MlyI GAGTC 2 cut(s) 114, 161
MmeI TCCRAC 2 cut(s) 502, 979
MseI TTAA 1 cut(s) 813
MslI CAYNNNNRTG 1 cut(s) 14
MspI CCGG 4 cut(s) 69, 104, 109, 222
MspR9I CCNGG 5 cut(s) 70, 105, 223, 597, 633
MvaI CCWGG 2 cut(s) 597, 633
MwoI GCNNNNNNNGC 3 cut(s) 245, 388, 477
NciI CCSGG 3 cut(s) 70, 105, 223
NdeII GATC 5 cut(s) 400, 420, 439, 909, 1010
NlaIII CATG 8 cut(s) 19, 217, 248, 311, 389, 427, 617, 770
NlaIV GGNNCC 5 cut(s) 45, 366, 367, 680, 681
NmeAIII GCCGAG 2 cut(s) 102, 189
NmuCI GTSAC 2 cut(s) 709, 781
PagI TCATGA 2 cut(s) 423, 613
PaqCI CACCTGC 1 cut(s) 583
PfeI GAWTC 1 cut(s) 636
Pfl23II CGTACG 1 cut(s) 559
PfoI TCCNGGA 1 cut(s) 631
PkrI GCNGC 2 cut(s) 393, 807
PleI GAGTC 2 cut(s) 114, 160
PpsI GAGTC 2 cut(s) 114, 160
PpuMI RGGWCCY 1 cut(s) 365
PshBI ATTAAT 1 cut(s) 813
Psp5II RGGWCCY 1 cut(s) 365
Psp6I CCWGG 2 cut(s) 595, 631
PspGI CCWGG 2 cut(s) 595, 631
PspLI CGTACG 1 cut(s) 559
PspN4I GGNNCC 5 cut(s) 45, 366, 367, 680, 681
PspOMI GGGCCC 1 cut(s) 678
PspPPI RGGWCCY 1 cut(s) 365
PstI CTGCAG 1 cut(s) 802
PstNI CAGNNNCTG 2 cut(s) 149, 185
PsuI RGATCY 1 cut(s) 1010
RsaI GTAC 4 cut(s) 227, 305, 561, 605
RsaNI GTAC 4 cut(s) 226, 304, 560, 604
RseI CAYNNNNRTG 1 cut(s) 14
SaqAI TTAA 1 cut(s) 813
SatI GCNGC 2 cut(s) 392, 806
Sau3AI GATC 5 cut(s) 400, 420, 439, 909, 1010
SchI GAGTC 2 cut(s) 114, 161
ScrFI CCNGG 5 cut(s) 70, 105, 223, 597, 633
SduI GDGCHC 1 cut(s) 682
SfaNI GCATC 1 cut(s) 391
SfcI CTRYAG 2 cut(s) 798, 868
SinI GGWCC 3 cut(s) 365, 555, 648
SmiMI CAYNNNNRTG 1 cut(s) 14
Sse9I AATT 3 cut(s) 288, 410, 545
SsiI CCGC 4 cut(s) 311, 518, 578, 902
SspMI CTAG 2 cut(s) 83, 249
StyD4I CCNGG 5 cut(s) 68, 103, 221, 595, 631
StyI CCWWGG 1 cut(s) 267
TaaI ACNGT 4 cut(s) 230, 734, 881, 941
TaiI ACGT 3 cut(s) 27, 431, 1028
TaqI TCGA 2 cut(s) 912, 1030
TaqII GACCGA 1 cut(s) 132
TasI AATT 3 cut(s) 288, 410, 545
TfiI GAWTC 1 cut(s) 636
Tru1I TTAA 1 cut(s) 813
Tru9I TTAA 1 cut(s) 813
TscAI CASTG 2 cut(s) 462, 737
TseFI GTSAC 2 cut(s) 709, 781
TseI GCWGC 2 cut(s) 391, 805
Tsp45I GTSAC 2 cut(s) 709, 781
TspGWI ACGGA 2 cut(s) 547, 577
TspRI CASTG 2 cut(s) 462, 737
VpaK11BI GGWCC 3 cut(s) 365, 555, 648
VspI ATTAAT 1 cut(s) 813
XapI RAATTY 2 cut(s) 410, 545
XcmI CCANNNNNNNNNTGG 1 cut(s) 710
XspI CTAG 2 cut(s) 83, 249
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.