Rmu_sc0000442.1_g000004

Belongs to the UDP-glycosyltransferase family

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0000442.1
Physical Location & Seq
Reverse (-)
7267 .. 7686
420 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0000442.1_g000004.1.cds

Sequence Viewer

Length: 420 bp
atgggaatgttgtgtgggtgggccccacaagtggaggttttaagtcaccgagcagttgggggatttgtctcacattgtgggtggaactctatattggaaagcttgtggtttggtgtgcctattgttacttggccattgtatgctgagcaacagctcaatgcatttcagatgacgagggacttgggattgggggtggagttgagtgttatttacagaaaggatggtggtgactttgtaacggcggatgagattgagagagctctgagacgtttgatggagggtgatggtgaggttaggaagagggttcaagaaatgagtggaatatgtaggaaggctgttgatgatggtgggtcttcttctgctgcttttggcagcttaattgaggtcatgttagcaagccttaaaactaaaagcggttga
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

139

Amino Acids

15.18

Weight (kDa)

5.37

Isoelectric Point (pI)

40.67

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Orthologous Genes (Group: OG0014775)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AciI CCGC 2 cut(s) 242, 414
AcoI YGGCCR 1 cut(s) 131
AdeI CACNNNGTG 1 cut(s) 77
AfiI CCNNNNNNNGG 1 cut(s) 31
AgsI TTSAA 1 cut(s) 308
AjuI GAANNNNNNNTTGG 2 cut(s) 77, 109
AluBI AGCT 4 cut(s) 102, 154, 260, 375
AluI AGCT 4 cut(s) 102, 154, 260, 375
Alw21I GWGCWC 1 cut(s) 262
Alw26I GTCTC 2 cut(s) 73, 259
AoxI GGCC 2 cut(s) 21, 131
ApaI GGGCCC 1 cut(s) 25
ApeKI GCWGC 2 cut(s) 362, 372
AspS9I GGNCC 2 cut(s) 21, 22
AsuHPI GGTGA 4 cut(s) 38, 239, 293, 299
BaeGI GKGCMC 1 cut(s) 25
BalI TGGCCA 1 cut(s) 133
BanII GRGCYC 2 cut(s) 25, 262
BbsI GAAGAC 1 cut(s) 345
Bbv12I GWGCWC 1 cut(s) 262
BbvI GCAGC 2 cut(s) 349, 384
BccI CCATC 4 cut(s) 215, 268, 278, 338
BceAI ACGGC 1 cut(s) 255
BcoDI GTCTC 2 cut(s) 73, 259
BisI GCNGC 2 cut(s) 363, 373
BlpI GCTNAGC 1 cut(s) 144
BlsI GCNGC 2 cut(s) 364, 374
BmgT120I GGNCC 2 cut(s) 21, 22
BmiI GGNNCC 2 cut(s) 23, 24
BpiI GAAGAC 1 cut(s) 345
Bpu1102I GCTNAGC 1 cut(s) 144
Bsc4I CCNNNNNNNGG 1 cut(s) 31
BseGI GGATG 2 cut(s) 226, 250
BseLI CCNNNNNNNGG 1 cut(s) 31
BseMII CTCAG 2 cut(s) 135, 254
BseSI GKGCMC 1 cut(s) 25
BseXI GCAGC 2 cut(s) 349, 384
BshFI GGCC 2 cut(s) 23, 133
BsiHKAI GWGCWC 1 cut(s) 262
BslFI GGGAC 1 cut(s) 191
BslI CCNNNNNNNGG 1 cut(s) 31
BsmAI GTCTC 2 cut(s) 73, 259
BsmBI CGTCTC 1 cut(s) 259
BsmFI GGGAC 1 cut(s) 191
BsnI GGCC 2 cut(s) 23, 133
Bsp120I GGGCCC 1 cut(s) 21
Bsp1286I GDGCHC 2 cut(s) 25, 262
Bsp1720I GCTNAGC 1 cut(s) 144
BspACI CCGC 2 cut(s) 242, 414
BspANI GGCC 2 cut(s) 23, 133
BspCNI CTCAG 2 cut(s) 136, 255
BspLI GGNNCC 2 cut(s) 23, 24
Bst6I CTCTTC 1 cut(s) 293
BstC8I GCNNGC 1 cut(s) 397
BstDEI CTNAG 2 cut(s) 144, 263
BstF5I GGATG 2 cut(s) 226, 250
BstMAI GTCTC 2 cut(s) 73, 259
BstSLI GKGCMC 1 cut(s) 25
BstV1I GCAGC 2 cut(s) 349, 384
BstV2I GAAGAC 1 cut(s) 345
BsuRI GGCC 2 cut(s) 23, 133
BtsCI GGATG 2 cut(s) 226, 250
Cac8I GCNNGC 1 cut(s) 397
Cfr13I GGNCC 2 cut(s) 21, 22
CviAII CATG 1 cut(s) 388
CviJI RGCY 8 cut(s) 23, 102, 133, 154, 260, 335, 375, 399
CviKI_1 RGCY 8 cut(s) 23, 102, 133, 154, 260, 335, 375, 399
DdeI CTNAG 2 cut(s) 144, 263
DraIII CACNNNGTG 1 cut(s) 77
EaeI YGGCCR 1 cut(s) 131
Eam1104I CTCTTC 1 cut(s) 293
EarI CTCTTC 1 cut(s) 293
EciI GGCGGA 1 cut(s) 257
Ecl136II GAGCTC 1 cut(s) 260
Eco24I GRGCYC 2 cut(s) 25, 262
Eco53kI GAGCTC 1 cut(s) 260
EcoICRI GAGCTC 1 cut(s) 260
EcoO109I RGGNCCY 1 cut(s) 22
EcoT22I ATGCAT 1 cut(s) 163
EcoT38I GRGCYC 2 cut(s) 25, 262
Esp3I CGTCTC 1 cut(s) 259
FaeI CATG 1 cut(s) 391
FaiI YATR 4 cut(s) 92, 141, 325, 389
FaqI GGGAC 1 cut(s) 191
FatI CATG 1 cut(s) 387
Fnu4HI GCNGC 2 cut(s) 363, 373
FokI GGATG 2 cut(s) 233, 257
FriOI GRGCYC 2 cut(s) 25, 262
Fsp4HI GCNGC 2 cut(s) 363, 373
GluI GCNGC 2 cut(s) 363, 373
HaeIII GGCC 2 cut(s) 23, 133
Hin1II CATG 1 cut(s) 391
HindIII AAGCTT 1 cut(s) 100
HphI GGTGA 4 cut(s) 38, 239, 293, 299
Hpy188I TCNGA 2 cut(s) 168, 264
Hpy188III TCNNGA 1 cut(s) 308
HpyAV CCTTC 1 cut(s) 325
HpyCH4IV ACGT 1 cut(s) 268
HpyCH4V TGCA 1 cut(s) 161
HpyF3I CTNAG 2 cut(s) 144, 263
HpySE526I ACGT 1 cut(s) 268
Hsp92II CATG 1 cut(s) 391
Lsp1109I GCAGC 2 cut(s) 349, 384
MaeII ACGT 1 cut(s) 268
MaeIII GTNAC 4 cut(s) 44, 124, 227, 235
MboII GAAGA 3 cut(s) 310, 345, 348
MhlI GDGCHC 2 cut(s) 25, 262
MlsI TGGCCA 1 cut(s) 133
MluCI AATT 1 cut(s) 378
MluNI TGGCCA 1 cut(s) 133
MnlI CCTC 6 cut(s) 28, 168, 271, 283, 294, 376
Mox20I TGGCCA 1 cut(s) 133
Mph1103I ATGCAT 1 cut(s) 163
MscI TGGCCA 1 cut(s) 133
MseI TTAA 3 cut(s) 41, 377, 402
Msp20I TGGCCA 1 cut(s) 133
NlaIII CATG 1 cut(s) 391
NlaIV GGNNCC 2 cut(s) 23, 24
NmuCI GTSAC 2 cut(s) 44, 227
NsiI ATGCAT 1 cut(s) 163
PkrI GCNGC 2 cut(s) 364, 374
Psp124BI GAGCTC 1 cut(s) 262
PspN4I GGNNCC 2 cut(s) 23, 24
PspOMI GGGCCC 1 cut(s) 21
PspPI GGNCC 2 cut(s) 21, 22
SacI GAGCTC 1 cut(s) 262
SaqAI TTAA 3 cut(s) 41, 377, 402
SatI GCNGC 2 cut(s) 363, 373
Sau96I GGNCC 2 cut(s) 21, 22
SduI GDGCHC 2 cut(s) 25, 262
SetI ASST 8 cut(s) 39, 104, 156, 262, 271, 294, 377, 387
SgeI CNNG 9 cut(s) 41, 62, 115, 141, 186, 193, 320, 400, 408
Sse9I AATT 1 cut(s) 378
SsiI CCGC 2 cut(s) 242, 414
SstI GAGCTC 1 cut(s) 262
TaiI ACGT 1 cut(s) 271
TasI AATT 1 cut(s) 378
Tru1I TTAA 3 cut(s) 41, 377, 402
Tru9I TTAA 3 cut(s) 41, 377, 402
TseFI GTSAC 2 cut(s) 44, 227
TseI GCWGC 2 cut(s) 362, 372
Tsp45I GTSAC 2 cut(s) 44, 227
Zsp2I ATGCAT 1 cut(s) 163
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.