MD09G1155600.v1.1

No description available

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr09
Physical Location & Seq
Reverse (-)
12384378 .. 12391287
6910 bp
Loading structure...
UTR
Exon/CDS
Intron
MD09G1155600.v1.1.491

Sequence Viewer

Length: 3825 bp
ATGGCAGTTGCGTTTGGTGGCTTCTCCATCCGAGAATATGCGGCGAAGATGCGAACCGTGGACGTGCTGAAATGTTATCCCTTCGCGGTTGCGGACAACCACGACGACGAAGATACGAAGAAGAAGAAGGAAGCAGAAGCGGCGGCGTTGCTTCCTCCGATGACCGTGACCAAGTTCAACTGGTGGTCCCACGAGCTCCACCGCTCGAAAAGATCCAACAAAAACAAAGAGGTACTAACTCTTGTCAACAAAGAAAGCTCAGATATCCCCAGAAACGACATCGAATTCACTGCTGTCGAACAACGACTTGACGAGGTTGTTGCTGCTGATGGTGATGGTGCGGCTGAGAGCGAGGAGACCCTGAAATCGTCTGACGACGACTTATCGTCGTTGGTTTGTCCAGTTTGTAAAGATTTTGAGGCGTCTACCGTGAACGGTGTGAACGCCCATATCGATGGCTGTCTTGCGTCGAGGGAGGAGCGGAGGAGGCAGATGGGGAAGATAAAATCGAAAGCTCCCAAGAAGAGATCTATTGCGGAAATATTCGCGGTGGCGCCGCAGATTCAAACGCATGAAAAAGATCTTTGTGAAAGAGATGACGTTGATGGAGATAATAATTGTAAGGTGTTGGGTGAGAGTGGCAGTGTTTTAAAGGCAACAAAGAAAGTAAAGAAAAGGAAGAAGGAAAAAAGGGTTATGTTATTGGAGGAGGAGAACAACAACAAGAAGTTCAAGAAGAAGAAGATTAAGATGATGAAGAATGATGGGTTAATTGCAAACAAGGACCATTCTTGCAAACTTAAATTGCAAAGTTCAGCCAATTATGCCAAAAAGCTGAATAAGAAGTTTGCACCGGATATTTGGGATTCTGTAACTGCTTGTGCAAGGACACCAAATGTCAAATGTTTAACTGCAAAGAAGCGAAAAGTTGTTCAAACATCCAAATCATTTCCAAAGCGTAAAAAACCAGTGTTTGCCGTTCACAGCATTCTCAAGAATCATGATGTTTGTGGGCAGAACTCCACTTATTGCAGCATGCAAAGTGATAGTCAATCAAATCCTTGTGGTATTCAACATTCAGAAAGGCATGTTAAATTTTCTGGGATGGATCACAAACTTAGTCCGAGGAATAATCGAGTGTCTTCCTTTGAGAATAATTCCGATTCCTTTGCTAGTTCATCTGAGAAGGACCAGTCTTCTGACAGTAATAAAGAAGCAGCCCCCATGGAGGTACACAGAAGAAAAAATGATGTTTCAATTGATACAGATATTGGAACTGAGTCTTGCAGTGTAATCGGAAGGAAGGAATTGCCTATAATTCCTGATCATGTTGATATTCCAAGTTTTCTGAGGCCACATATGACTCATCAAGAAAAAGTAAATCAAATGCCAGATAAATCTGTGCCTTCAAGTAGTTTTGCGGCTGAAGATAATAATTTGAGGATGTTCGACCAAGGCTACCTACCCCCCACACATAGACCTGCAGATTCTCGCTTTCCAAGACCGATATTTGCTCTAGAAGAATCCCGTGTAAGTACTCAAGGAGCTACTGTTTCCAGAGATTTTGAGCCCAGTGGAAAGATGATTGATCATGTCGTACATCCTATGCACGGAGTTTCTGCAATGAGTTCAAAGGAAAATACAGGAGCATTTCCTGTCCCTTCTTCATCTAGTTTCATTTTCAATGAGAAAGCAAAGGGGAGGTTTCCATTCCTGTCACAATCTGAAATTGATAAATTCAGCGATTGTGGTCTGCACTCCCAATTATTATGTCCACCCATGGACTTGATGGGTGGCTCATATCCCTTTCCGGAGTGGAAACAAAGAACAGTTACATATAGGGAAGGGTGTGCAGATGAGGACTTTGTTGGCTTGCCTCTCAATTCACATGGTGAGCTAATCCAGTTGAGGAAGTTGAATGCTACACCAGGGTCCTCCAATGGCTTGCCTACACAGAATTTTACCCACTTGACAAGTATCAGCAGCTTACCGACGCAGAATTTTACCCATGTAACAAATACAGGAGATTGTTCGACTGCATGCAACAAACATGTTTTGGAAAGAGAACTTCCAAGTGATCGGTTGAACTTCTTTCCTATGCAGAATTGTGTTAAACAGAATCCTAGGTCACATATTCGAGATTTGTTTGGTGCTACTTACTTGCAAAGTACTCAAAGAGCAGATATACATCAGTTTGATTTTGAGAGCGGAAGCAGCCACTCTTTTTGCCCAATTGTTTCAGACCGGAACCTGATGAATGTCTCTATCAGTGAATGCGGACAATTTGACCAGGTGAAGAACCAAAAGATAGGTGGAATGATCTCTAAGGAAAATTCAGGCCGCACACCATTGGGTGTGAATCAACCAACAATGCGGTTAATGGGAAAAGATGTGGCAATTGGTAAAAGTAGCAGAGAGATTCAAGGATTTGAGGATGGAACATTGTGGACAGATAAGGAAATTATAGCAGAGCATTGTCCTTCAAGTACCGCCTTGGATACTCTGTCGTTGAACAGGAATTTCCAGCATAACTGGTTTCCATGCACAGCATCGGGGAAGTTGAAAGAACCTGCCGCACAGTCGTTTGAAATTCACAGAGAACATGCCCCACAGCAAAATTTAATGATGAAAGCTTCAGAGTCCAGATTTCCCCACGCTTACCGCAACTGGCAAAGCCATTCCACGTTTGAAAATGGCAGCCTTACCGCCAACAGAAGTCCAAGTTCTAATTTGATCCGTTTTGCTCAGATGCCCACTTCACCTGCAATGTTTAATGGGGCACCTAAATTCCGAGAGCAATTCTTGTCTGGAGCTGAATCTCTACAATCCCTACAGTTTGGCTCTCAACTACCGATATTATCTGCTCCTCCTAGTACCTGTGGGCATGGGGTTTTAAGACCTGCTGAACTCAATTACAAGCAGAATCCACCTCATTTTGCAAAATCATCATTCGGCTTCCCTTTCCTGAATCCTGAATGTAGAGACAATAATGTGGAGTCATCATGGTTTCAGAGCTCCTCTATGGGCATGCCCCCTTGGTTTTTACATGCAACACTGCAGGTAAACCCCCCAAATGCAGCTTCTCAATCTTTTCTAAATGTGGATAGCAGACACCATCAGCATATTATGCCGAGAGCTAACTTTTTTAACGAGCATCATTCGTCGGAAATTTCTTATCCTTGCAATTTCATGACCTCTCATTCACAAGTGAGGGAGAATGCACCTACTCAGGCGACTGCAGTTATGCCTCCTCTTGCTCGAGCTGTTCAAGGAGTAAATCTACAACCAACATCTGGCACCGACATGGACAGAAACAGAATCAAGATCAAAGACAGATTAAAAACAAAATCTTTCAGTATCAAAGACCCATATCCCTTCAAGAAAACCAAGAGACTGGCAGTGAAAGCTGTAGATTCAACAAAGGCTGCCAACATGTTGCGCTTAGAAACACAAGAAAAGTTGAGTGCTGCTGCAGGATCGTCAAGAGGGAACATTTTAGATGAAATGCAGTCTAATATGAGAGCACTTGACCTCGACTCAAGTTGGAAGAAAGCAAGCGATTTGGGTTGCAGCCAACACGACGTTCAAAAGGATGGATTCAAAACCTTTGGAGTTGAGTCTTCCAAAATGGATGGCGTTGTGAGAAGTACAGGCCCCATTAAACTTTGTGCAGGAGCAACACACATCATAAAACCCACTCCAAATGTGGATCAGGATAACTCCAGGTCAATCCATTCAACAATCCCCTTTGTTGCAGTAACTAATGGTTTCAGAGAACCACAACCTCAGAAGAAAACAACAAAGATTTACAGGTTCACTGCTTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

1275

Amino Acids

142.06

Weight (kDa)

9.01

Isoelectric Point (pI)

50.13

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Orthologous Genes (Group: OG0012449)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 2770
Acc36I ACCTGC 5 cut(s) 1489, 2578, 2770, 2908, 3049
AccB1I GGYRCC 3 cut(s) 553, 2779, 3296
AccB7I CCANNNNNTGG 1 cut(s) 3293
AccBSI CCGCTC 3 cut(s) 204, 481, 2208
AccI GTMKAC 1 cut(s) 425
AccII CGCG 2 cut(s) 86, 548
AccIII TCCGGA 1 cut(s) 1810
AclWI GGATC 5 cut(s) 207, 1116, 2728, 3484, 3717
AcuI CTGAAG 2 cut(s) 1446, 2619
AcyI GRCGYC 2 cut(s) 422, 554
AdeI CACNNNGTG 1 cut(s) 1892
AfaI GTAC 8 cut(s) 234, 1233, 1537, 1599, 2170, 2488, 2875, 3649
AfiI CCNNNNNNNGG 3 cut(s) 1228, 1610, 3293
AflIII ACRYGT 2 cut(s) 2050, 3432
AhdI GACNNNNNGTC 1 cut(s) 385
AjiI CACGTC 1 cut(s) 64
AjnI CCWGG 3 cut(s) 1927, 2289, 3722
AjuI GAANNNNNNNTTGG 4 cut(s) 3064, 3096, 3567, 3599
Alw21I GWGCWC 3 cut(s) 198, 3017, 3526
Alw26I GTCTC 4 cut(s) 350, 2266, 2976, 3385
AlwI GGATC 5 cut(s) 207, 1116, 2728, 3484, 3717
Ama87I CYCGRG 1 cut(s) 3258
Aor13HI TCCGGA 1 cut(s) 1810
AoxI GGCC 3 cut(s) 1352, 2338, 3652
ArsI GACNNNNNNTTYG 2 cut(s) 1033, 1065
AspA2I CCTAGG 1 cut(s) 2123
AspLEI GCGC 2 cut(s) 556, 3441
AspS9I GGNCC 5 cut(s) 186, 784, 1189, 1932, 3653
AsuHPI GGTGA 5 cut(s) 344, 644, 1904, 2305, 2751
AvaI CYCGRG 1 cut(s) 3258
AvaII GGWCC 4 cut(s) 186, 784, 1189, 1932
AvrII CCTAGG 1 cut(s) 2123
BaeGI GKGCMC 1 cut(s) 2782
BanI GGYRCC 3 cut(s) 553, 2779, 3296
BanII GRGCYC 3 cut(s) 198, 1572, 3017
BauI CACGAG 1 cut(s) 191
BbsI GAAGAC 3 cut(s) 1134, 1188, 3612
Bbv12I GWGCWC 3 cut(s) 198, 3017, 3526
BceAI ACGGC 1 cut(s) 962
BcgI CGANNNNNNTGC 8 cut(s) 272, 302, 306, 336, 1151, 1185, 1276, 1310
BciT130I CCWGG 3 cut(s) 1929, 2291, 3724
BciVI GTATCC 1 cut(s) 2491
BclI TGATCA 2 cut(s) 1324, 1588
BcoDI GTCTC 4 cut(s) 350, 2266, 2976, 3385
BfaI CTAG 5 cut(s) 1173, 1517, 1671, 2124, 2871
BfmI CTRYAG 6 cut(s) 1482, 2831, 3056, 3237, 3408, 3471
BfoI RGCGCY 1 cut(s) 557
BfuAI ACCTGC 5 cut(s) 1489, 2578, 2770, 2908, 3049
BfuI GTATCC 1 cut(s) 2491
BglII AGATCT 2 cut(s) 527, 580
BlnI CCTAGG 1 cut(s) 2123
BmcAI AGTACT 2 cut(s) 1537, 2170
Bme1390I CCNGG 3 cut(s) 1929, 2291, 3724
Bme18I GGWCC 4 cut(s) 186, 784, 1189, 1932
BmeRI GACNNNNNGTC 1 cut(s) 385
BmeT110I CYCGRG 1 cut(s) 3258
BmgBI CACGTC 1 cut(s) 64
BmgT120I GGNCC 5 cut(s) 186, 784, 1189, 1932, 3653
BmiI GGNNCC 7 cut(s) 188, 555, 1933, 2249, 2781, 3298, 3655
BmrFI CCNGG 3 cut(s) 1929, 2291, 3724
BmrI ACTGGG 1 cut(s) 1566
BmsI GCATC 4 cut(s) 39, 2558, 2739, 3163
BmuI ACTGGG 1 cut(s) 1566
BpiI GAAGAC 3 cut(s) 1134, 1188, 3612
BpmI CTGGAG 2 cut(s) 2829, 3706
BpuEI CTTGAG 3 cut(s) 977, 1524, 3523
Bsa29I ATCGAT 1 cut(s) 453
BsaBI GATNNNNATC 1 cut(s) 2187
BsaHI GRCGYC 2 cut(s) 422, 554
BsaI GGTCTC 1 cut(s) 350
BsaJI CCNNGG 9 cut(s) 57, 1124, 1224, 1453, 1779, 1928, 2123, 2493, 3035
BsaWI WCCGGW 3 cut(s) 853, 1810, 2244
BsaXI ACNNNNNCTCC 2 cut(s) 1536, 1566
Bsc4I CCNNNNNNNGG 3 cut(s) 1228, 1610, 3293
Bse1I ACTGG 9 cut(s) 185, 401, 968, 1192, 1572, 1903, 2537, 2672, 3399
Bse3DI GCAATG 2 cut(s) 1629, 2772
Bse8I GATNNNNATC 1 cut(s) 2187
BseAI TCCGGA 1 cut(s) 1810
BseBI CCWGG 3 cut(s) 1929, 2291, 3724
BseCI ATCGAT 1 cut(s) 453
BseDI CCNNGG 9 cut(s) 57, 1124, 1224, 1453, 1779, 1928, 2123, 2493, 3035
BseGI GGATG 8 cut(s) 27, 938, 1110, 1449, 1600, 2440, 3598, 3637
BseJI GATNNNNATC 1 cut(s) 2187
BseLI CCNNNNNNNGG 3 cut(s) 1228, 1610, 3293
BseMI GCAATG 2 cut(s) 1629, 2772
BseMII CTCAG 8 cut(s) 273, 336, 1173, 1269, 1340, 2759, 3242, 3800
BseNI ACTGG 9 cut(s) 185, 401, 968, 1192, 1572, 1903, 2537, 2672, 3399
BseRI GAGGAG 8 cut(s) 368, 491, 499, 722, 725, 2856, 3007, 3240
BseSI GKGCMC 1 cut(s) 2782
BsgI GTGCAG 3 cut(s) 1739, 1872, 3690
Bsh1236I CGCG 2 cut(s) 86, 548
BshFI GGCC 3 cut(s) 1354, 2340, 3654
BshNI GGYRCC 3 cut(s) 553, 2779, 3296
BshVI ATCGAT 1 cut(s) 453
BsiHKAI GWGCWC 3 cut(s) 198, 3017, 3526
BsiHKCI CYCGRG 1 cut(s) 3258
BsiSI CCGG 3 cut(s) 854, 1811, 2245
BslFI GGGAC 2 cut(s) 172, 1643
BslI CCNNNNNNNGG 3 cut(s) 1228, 1610, 3293
BsmAI GTCTC 4 cut(s) 350, 2266, 2976, 3385
BsmFI GGGAC 2 cut(s) 172, 1643
BsmI GAATGC 4 cut(s) 987, 1924, 2279, 3223
BsnI GGCC 3 cut(s) 1354, 2340, 3654
Bso31I GGTCTC 1 cut(s) 350
BsoBI CYCGRG 1 cut(s) 3258
Bsp1286I GDGCHC 5 cut(s) 198, 1572, 2782, 3017, 3526
Bsp13I TCCGGA 1 cut(s) 1810
Bsp19I CCATGG 2 cut(s) 1224, 1779
BspANI GGCC 3 cut(s) 1354, 2340, 3654
BspCNI CTCAG 8 cut(s) 272, 337, 1174, 1270, 1341, 2758, 3241, 3799
BspDI ATCGAT 1 cut(s) 453
BspEI TCCGGA 1 cut(s) 1810
BspFNI CGCG 2 cut(s) 86, 548
BspHI TCATGA 2 cut(s) 1000, 3189
BspLI GGNNCC 7 cut(s) 188, 555, 1933, 2249, 2781, 3298, 3655
BspMAI CTGCAG 4 cut(s) 1486, 3060, 3241, 3475
BspMI ACCTGC 5 cut(s) 1489, 2578, 2770, 2908, 3049
BspPI GGATC 5 cut(s) 207, 1116, 2728, 3484, 3717
BspT107I GGYRCC 3 cut(s) 553, 2779, 3296
BspTNI GGTCTC 1 cut(s) 350
BsrBI CCGCTC 3 cut(s) 204, 481, 2208
BsrDI GCAATG 2 cut(s) 1629, 2772
BsrI ACTGG 9 cut(s) 185, 401, 968, 1192, 1572, 1903, 2537, 2672, 3399
BssECI CCNNGG 9 cut(s) 57, 1124, 1224, 1453, 1779, 1928, 2123, 2493, 3035
BssNI GRCGYC 2 cut(s) 422, 554
BssSI CACGAG 1 cut(s) 191
BssT1I CCWWGG 6 cut(s) 1224, 1453, 1779, 2123, 2493, 3035
Bst2BI CACGAG 1 cut(s) 191
Bst2UI CCWGG 3 cut(s) 1929, 2291, 3724
Bst4CI ACNGT 9 cut(s) 58, 166, 430, 437, 1205, 1552, 1831, 2580, 2835
Bst6I CTCTTC 1 cut(s) 518
BstACI GRCGYC 2 cut(s) 422, 554
BstAPI GCANNNNNTGC 1 cut(s) 3127
BstC8I GCNNGC 6 cut(s) 1037, 1874, 1946, 2041, 3029, 3556
BstDSI CCRYGG 3 cut(s) 57, 1224, 1779
BstF5I GGATG 8 cut(s) 27, 938, 1110, 1449, 1600, 2440, 3598, 3637
BstFNI CGCG 2 cut(s) 86, 548
BstH2I RGCGCY 1 cut(s) 557
BstHHI GCGC 2 cut(s) 556, 3441
BstMAI GTCTC 4 cut(s) 350, 2266, 2976, 3385
BstMWI GCNNNNNNNGC 6 cut(s) 140, 487, 824, 2214, 3127, 3404
BstNI CCWGG 3 cut(s) 1929, 2291, 3724
BstNSI RCATGY 8 cut(s) 1039, 1091, 2043, 2054, 2606, 3031, 3050, 3436
BstSCI CCNGG 3 cut(s) 1927, 2289, 3722
BstSFI CTRYAG 6 cut(s) 1482, 2831, 3056, 3237, 3408, 3471
BstSLI GKGCMC 1 cut(s) 2782
BstUI CGCG 2 cut(s) 86, 548
BstV2I GAAGAC 3 cut(s) 1134, 1188, 3612
BstX2I RGATCY 3 cut(s) 212, 527, 580
BstXI CCANNNNNNTGG 2 cut(s) 455, 3394
BstYI RGATCY 3 cut(s) 212, 527, 580
Bsu15I ATCGAT 1 cut(s) 453
BsuI GTATCC 1 cut(s) 2491
BsuRI GGCC 3 cut(s) 1354, 2340, 3654
BsuTUI ATCGAT 1 cut(s) 453
BtgI CCRYGG 3 cut(s) 57, 1224, 1779
BtrI CACGTC 1 cut(s) 64
BtsCI GGATG 8 cut(s) 27, 938, 1110, 1449, 1600, 2440, 3598, 3637
BtsI GCAGTG 6 cut(s) 288, 649, 1294, 3053, 3405, 3816
BtsIMutI CAGTG 9 cut(s) 288, 649, 975, 1294, 1579, 2275, 3053, 3405, 3816
BveI ACCTGC 5 cut(s) 1489, 2578, 2770, 2908, 3049
Cac8I GCNNGC 6 cut(s) 1037, 1874, 1946, 2041, 3029, 3556
CciI TCATGA 2 cut(s) 1000, 3189
CfoI GCGC 2 cut(s) 556, 3441
Cfr13I GGNCC 5 cut(s) 186, 784, 1189, 1932, 3653
ClaI ATCGAT 1 cut(s) 453
CseI GACGC 3 cut(s) 411, 456, 2002
CsiI ACCWGGT 1 cut(s) 2289
Csp6I GTAC 8 cut(s) 233, 1232, 1536, 1598, 2169, 2487, 2874, 3648
CspCI CAANNNNNGTGG 2 cut(s) 2207, 2242
CviQI GTAC 8 cut(s) 233, 1232, 1536, 1598, 2169, 2487, 2874, 3648
DinI GGCGCC 1 cut(s) 555
DraI TTTAAA 1 cut(s) 651
DraIII CACNNNGTG 1 cut(s) 1892
DriI GACNNNNNGTC 1 cut(s) 385
Eam1104I CTCTTC 1 cut(s) 518
Eam1105I GACNNNNNGTC 1 cut(s) 385
EarI CTCTTC 1 cut(s) 518
Ecl136II GAGCTC 2 cut(s) 196, 3015
Eco130I CCWWGG 6 cut(s) 1224, 1453, 1779, 2123, 2493, 3035
Eco24I GRGCYC 3 cut(s) 198, 1572, 3017
Eco31I GGTCTC 1 cut(s) 350
Eco32I GATATC 1 cut(s) 265
Eco47I GGWCC 4 cut(s) 186, 784, 1189, 1932
Eco53kI GAGCTC 2 cut(s) 196, 3015
Eco57I CTGAAG 2 cut(s) 1446, 2619
Eco88I CYCGRG 1 cut(s) 3258
EcoICRI GAGCTC 2 cut(s) 196, 3015
EcoO109I RGGNCCY 2 cut(s) 1932, 3653
EcoRI GAATTC 1 cut(s) 284
EcoRII CCWGG 3 cut(s) 1927, 2289, 3722
EcoRV GATATC 1 cut(s) 265
EcoT14I CCWWGG 6 cut(s) 1224, 1453, 1779, 2123, 2493, 3035
EcoT38I GRGCYC 3 cut(s) 198, 1572, 3017
EgeI GGCGCC 1 cut(s) 555
EheI GGCGCC 1 cut(s) 555
ErhI CCWWGG 6 cut(s) 1224, 1453, 1779, 2123, 2493, 3035
FaqI GGGAC 2 cut(s) 172, 1643
FauNDI CATATG 1 cut(s) 1359
FbaI TGATCA 2 cut(s) 1324, 1588
FblI GTMKAC 1 cut(s) 425
FokI GGATG 8 cut(s) 14, 925, 1117, 1456, 1587, 2447, 3605, 3644
FriOI GRGCYC 3 cut(s) 198, 1572, 3017
FspBI CTAG 5 cut(s) 1173, 1517, 1671, 2124, 2871
GlaI GCGC 2 cut(s) 555, 3440
GsuI CTGGAG 2 cut(s) 2829, 3706
HaeII RGCGCY 1 cut(s) 557
HaeIII GGCC 3 cut(s) 1354, 2340, 3654
HapII CCGG 3 cut(s) 854, 1811, 2245
HgaI GACGC 3 cut(s) 411, 456, 2002
HhaI GCGC 2 cut(s) 556, 3441
Hin1I GRCGYC 2 cut(s) 422, 554
Hin6I GCGC 2 cut(s) 554, 3439
HinP1I GCGC 2 cut(s) 554, 3439
HincII GTYRAC 1 cut(s) 247
HindII GTYRAC 1 cut(s) 247
HindIII AAGCTT 1 cut(s) 2631
HpaII CCGG 3 cut(s) 854, 1811, 2245
HphI GGTGA 5 cut(s) 344, 644, 1904, 2305, 2751
Hpy99I CGWCG 8 cut(s) 107, 110, 380, 391, 472, 1996, 3166, 3584
HpyCH4III ACNGT 9 cut(s) 58, 166, 430, 437, 1205, 1552, 1831, 2580, 2835
HpyCH4IV ACGT 4 cut(s) 63, 600, 2684, 3582
HpyF10VI GCNNNNNNNGC 6 cut(s) 140, 487, 824, 2214, 3127, 3404
HpySE526I ACGT 4 cut(s) 63, 600, 2684, 3582
Hsp92I GRCGYC 2 cut(s) 422, 554
HspAI GCGC 2 cut(s) 554, 3439
KasI GGCGCC 1 cut(s) 553
Kpn2I TCCGGA 1 cut(s) 1810
Ksp22I TGATCA 2 cut(s) 1324, 1588
LmnI GCTCC 9 cut(s) 201, 478, 520, 1544, 1646, 2810, 2869, 3020, 3674
LweI GCATC 4 cut(s) 39, 2558, 2739, 3163
MabI ACCWGGT 1 cut(s) 2289
MaeI CTAG 5 cut(s) 1173, 1517, 1671, 2124, 2871
MaeII ACGT 4 cut(s) 63, 600, 2684, 3582
MaeIII GTNAC 7 cut(s) 166, 871, 1716, 1831, 2011, 2127, 3757
MbiI CCGCTC 3 cut(s) 204, 481, 2208
MfeI CAATTG 3 cut(s) 1257, 2232, 2397
MflI RGATCY 3 cut(s) 212, 527, 580
MhlI GDGCHC 5 cut(s) 198, 1572, 2782, 3017, 3526
Mly113I GGCGCC 1 cut(s) 554
MlyI GAGTC 6 cut(s) 1289, 1357, 2648, 3005, 3530, 3626
MmeI TCCRAC 3 cut(s) 240, 3144, 3524
MroI TCCGGA 1 cut(s) 1810
MslI CAYNNNNRTG 2 cut(s) 453, 3302
MspI CCGG 3 cut(s) 854, 1811, 2245
MspR9I CCNGG 3 cut(s) 1929, 2291, 3724
MunI CAATTG 3 cut(s) 1257, 2232, 2397
Mva1269I GAATGC 4 cut(s) 987, 1924, 2279, 3223
MvaI CCWGG 3 cut(s) 1929, 2291, 3724
MvnI CGCG 2 cut(s) 86, 548
MwoI GCNNNNNNNGC 6 cut(s) 140, 487, 824, 2214, 3127, 3404
NarI GGCGCC 1 cut(s) 554
NcoI CCATGG 2 cut(s) 1224, 1779
NdeI CATATG 1 cut(s) 1359
NlaIV GGNNCC 7 cut(s) 188, 555, 1933, 2249, 2781, 3298, 3655
NmeAIII GCCGAG 1 cut(s) 3156
NmuCI GTSAC 3 cut(s) 166, 1716, 2127
NspI RCATGY 8 cut(s) 1039, 1091, 2043, 2054, 2606, 3031, 3050, 3436
PaeI GCATGC 3 cut(s) 1039, 2043, 3031
PaeR7I CTCGAG 1 cut(s) 3258
PagI TCATGA 2 cut(s) 1000, 3189
PaqCI CACCTGC 1 cut(s) 2770
PciI ACATGT 2 cut(s) 2050, 3432
PcsI WCGNNNNNNNCGW 1 cut(s) 450
PctI GAATGC 4 cut(s) 987, 1924, 2279, 3223
PflMI CCANNNNNTGG 1 cut(s) 3293
PleI GAGTC 6 cut(s) 1288, 1357, 2647, 3004, 3530, 3625
PluTI GGCGCC 1 cut(s) 557
PpsI GAGTC 6 cut(s) 1288, 1357, 2647, 3004, 3530, 3625
PpuMI RGGWCCY 1 cut(s) 1932
PscI ACATGT 2 cut(s) 2050, 3432
Psp124BI GAGCTC 2 cut(s) 198, 3017
Psp5II RGGWCCY 1 cut(s) 1932
Psp6I CCWGG 3 cut(s) 1927, 2289, 3722
PspGI CCWGG 3 cut(s) 1927, 2289, 3722
PspN4I GGNNCC 7 cut(s) 188, 555, 1933, 2249, 2781, 3298, 3655
PspPI GGNCC 5 cut(s) 186, 784, 1189, 1932, 3653
PspPPI RGGWCCY 1 cut(s) 1932
PspXI VCTCGAGB 1 cut(s) 3258
PstI CTGCAG 4 cut(s) 1486, 3060, 3241, 3475
PsuI RGATCY 3 cut(s) 212, 527, 580
RsaI GTAC 8 cut(s) 234, 1233, 1537, 1599, 2170, 2488, 2875, 3649
RsaNI GTAC 8 cut(s) 233, 1232, 1536, 1598, 2169, 2487, 2874, 3648
RseI CAYNNNNRTG 2 cut(s) 453, 3302
SacI GAGCTC 2 cut(s) 198, 3017
Sau96I GGNCC 5 cut(s) 186, 784, 1189, 1932, 3653
ScaI AGTACT 2 cut(s) 1537, 2170
SchI GAGTC 6 cut(s) 1289, 1357, 2648, 3005, 3530, 3626
ScrFI CCNGG 3 cut(s) 1929, 2291, 3724
SduI GDGCHC 5 cut(s) 198, 1572, 2782, 3017, 3526
SexAI ACCWGGT 1 cut(s) 2289
SfaNI GCATC 4 cut(s) 39, 2558, 2739, 3163
SfcI CTRYAG 6 cut(s) 1482, 2831, 3056, 3237, 3408, 3471
SfoI GGCGCC 1 cut(s) 555
Sfr274I CTCGAG 1 cut(s) 3258
SinI GGWCC 4 cut(s) 186, 784, 1189, 1932
SlaI CTCGAG 1 cut(s) 3258
SmiMI CAYNNNNRTG 2 cut(s) 453, 3302
SmlI CTYRAG 4 cut(s) 992, 1539, 3258, 3538
SmoI CTYRAG 4 cut(s) 992, 1539, 3258, 3538
SphI GCATGC 3 cut(s) 1039, 2043, 3031
SspDI GGCGCC 1 cut(s) 553
SspI AATATT 1 cut(s) 543
SspMI CTAG 5 cut(s) 1173, 1517, 1671, 2124, 2871
SstI GAGCTC 2 cut(s) 198, 3017
StyD4I CCNGG 3 cut(s) 1927, 2289, 3722
StyI CCWWGG 6 cut(s) 1224, 1453, 1779, 2123, 2493, 3035
TaaI ACNGT 9 cut(s) 58, 166, 430, 437, 1205, 1552, 1831, 2580, 2835
TaiI ACGT 4 cut(s) 66, 603, 2687, 3585
TaqII GACCGA 1 cut(s) 1519
TatI WGTACW 3 cut(s) 1535, 2168, 3647
TauI GCSGC 8 cut(s) 44, 143, 146, 344, 559, 1424, 2343, 2576
TscAI CASTG 9 cut(s) 295, 649, 975, 1294, 1579, 2275, 3060, 3405, 3823
TseFI GTSAC 3 cut(s) 166, 1716, 2127
Tsp45I GTSAC 3 cut(s) 166, 1716, 2127
TspDTI ATGAA 9 cut(s) 588, 770, 1167, 1656, 1666, 2270, 2642, 3178, 3516
TspGWI ACGGA 2 cut(s) 1626, 2726
TspRI CASTG 9 cut(s) 295, 649, 975, 1294, 1579, 2275, 3060, 3405, 3823
Van91I CCANNNNNTGG 1 cut(s) 3293
VpaK11BI GGWCC 4 cut(s) 186, 784, 1189, 1932
XbaI TCTAGA 1 cut(s) 1516
XceI RCATGY 8 cut(s) 1039, 1091, 2043, 2054, 2606, 3031, 3050, 3436
XcmI CCANNNNNNNNNTGG 3 cut(s) 1786, 2309, 3703
XhoI CTCGAG 1 cut(s) 3258
XmaJI CCTAGG 1 cut(s) 2123
XmiI GTMKAC 1 cut(s) 425
XspI CTAG 5 cut(s) 1173, 1517, 1671, 2124, 2871
ZrmI AGTACT 2 cut(s) 1537, 2170
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.