MD17G1141700.v1.1

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr17
OG0012449
Physical Location & Seq
Reverse (-)
12723475 .. 12728836
5362 bp
Loading structure...
UTR
Exon/CDS
Intron
MD17G1141700.v1.1.491

Sequence Viewer

Length: 2529 bp
ATGGCTGCTGCGTTTGATGGCTTCTCCATCCGAGAATATGCAGCGAAGATGCGAACCGTGGACGTTCTGAAATGTTATCCCTTCACGGTTGCGGACATACACGACGACGAAGATACGAAGAAGAAGAAGGAAGCAGAAGCGGCGGCGTTACTTCCTCCGATGACTGTGACCAAGTTCAAGTGGTGGTCCCACGAGTTCCACCGCTTGAAAAGATCCAGCACAAACCAAGAGGTACTGACCCTTGTGAACAAAGAAAGCTCAGATATTCCGAGAAACGACATCGAGTTCACTGCCGTCGAACGAAGACTTGACAAGGTTGTTGCTGCTGATGGTGATGGTGATGCTGAGAGTGAGGAGACCCAAAAATCGTCTGACGACGACTTGTCGTCTTTGGTTTGTCCGGTTTGTAAAGATTTTGCTGGGGCTACCGTGAACGGTGTAAACGCCCATATCGATGGCTGTCTTGCGTTGAGGGATGAGCGGAGGGGGCAGATGAGGAAGGCGAAATCGAAAGCTCCCAAGAAGAGATCGATTGCTGAGATATTCGCCGTGGCCCCGCAGATCCAAACGCATGAAGAAGGAGGTCTTTGTGGAATAGATAAAGTTAATGGAGATGATAATTGTAAGGTGTTGGGTGAGAGTGGCAGTGTTTTAAAGGCAACAAAGAAGGTAAAGAAAAGGCAGAAGGAGAAAAGGAAGAAGGAGAAAAGGGTTTTGTCATTGGAGGAGAACAACAACGACAACAAGAAGTTCAAGAAGAAGAAGATTAAGAAGATGAAGAATGAGGGGTTAATTGCAAACAAGCATTCTTGCAAACTTAAATTGCAAAGTTCAGTCAATTTTGCCAAAAAGCTGAATAAGAGGTGTGCAGTGGATGTTTGGAATTCCGTAACTGTTCGTGCAAGGACACCAAATCTCAAATGTTTATCTGCAAGGAAGCGAAAAGTTGCTCAAATATCGAAGTCGTTTCCTAAGCATAAAAACCCAGTGTTTGCCGTTCACGGCATTCTCAAGAATCATGATGCTTGTGGGCAGAACTCCACTTATTGCGGCATGCAAAGTGATAGTCAATCAAATCCTTGTGAGATTCAACATTCAGAAAGGCATGTCAGGTTTTCTGGAACGGATCACATACTTAGTCCAAGGAATAATGGAGTGTCTTCCTTTGAGAATAATTCAGATTCCTTTGCTAGTCCATCTGAGAAGGACGAGTATGCTGACAGTAATAAAGAAGCAACCCCCGTGGAGGTAGACAGAAGAGAAAATGATGTTTCAATTGGCATAGATATTGGAACCGAGTCTTGCAGTATAATCGGAAGGAAGGAATTGCCTCTAATTCCTGATCATGTTAATATTCCTAGTTTTCTGAGGCCACATATGACTCATCAAGAAAAAGTAAAGCATTTGCCAGATAAATCTGTGCCTTCAAGTAGTTTTGCGACTGAAGATAATAATTTAGGTATGTTCGACCAAGTCTACCCTACCCCCACACATAGACCTGCATATTCTGGCATTCCAAGACCGATTTGTTCTCTAGAAGAACCCTGCATAAGTACTCAAGGAGCTACTGTTTCCAGAGATTTTGAGCCCAGTGGAAAGATTGATTGTGTCGTACATCCTATGCACGGAGCTTCTGCAATGAGTTCAAAGGAAAATACTGGAGCATTTCCTGTCTCTTCTTCATCTAGTTTCAGTTTCAATGAGAATGCAAAGGGGAGGTTTCCGTTCCTGTCACAACCTGATATAGATAAATTCAGCGGTTGTGGTCTGCACTCCCAATCAGTATGTCCACCTGTGAACTTGATGGGTGGCTCATATCCCTTTCCGGAGTGGAAACAAAGAGCGGTTACATATAGGGAAAGGCGTGCAGATGAGGACTTTGTTGGTTTGCCTCTCAATTCACATGGTGAGCTAATCCAGTTGAGGAAGACGAATGCTATACCAGGGTTTTCCAGTGGCTTACCAATAGAGAATTTTACCCACTTAACGAGTATGAGTAGCTTACCAGCGCAGAATTTTACCTGTGTACCAAGTACGGGAGATTGTTCGACTCCATACAACAAGCATTTTTTGGAAAGAGAACTTCCAAATGACCGGTTGAACTTCTTTCCTATGCAGAATTATGTTAAAGAGAATCCTAGGTCACATATTCAAGATTTGTTTGGTGCTACTTACTTGCAAAATACTCAAAGAGCAGATATACATCAGCTTGATTTTGAGAGCAGAAGCAGCCACTCTTTTCGTCCACTTGTTTCAGACCGAAACCTGATGAATGTCTCTATCAGTGGACGCAGACAATTTGACCAGCTACAGAACCAAAAGATGCATGGAATGATCTCTACGGAAATTTCAGGCCACACACCATTGAATGCGAATCAACCAACAATGCGGTTAATGGGAAAAGATGTGGCAATTGGTAAAAGTAGCAAAGAGATTCAAGGGTTTGAGGATGGAAAAGAATTTCCAGCAGAACTGGTTTCCATGCACAGCATTGGGAAAGCTGAAAGAACCTGCTGCGCAGTCATTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

843

Amino Acids

93.8

Weight (kDa)

8.78

Isoelectric Point (pI)

48.45

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Orthologous Genes (Group: OG0012449)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G58770
fragaria_vesca FvH4_6g37820 FvH4_6g37820
malus_domestica MD09G1155600.v1.1 MD17G1141700.v1.1
prunus_persica Prupe.3G170300_v2.0.a1
pyrus_communis pycom17g13500
rosa_chinensis RchiOBHm_Chr2g0150941
rosa_laevigata RLG00000020518
rosa_multiflora Rmu_sc0000185.1_g000030
rosa_roxburghii Rroxscaffold_2G00096830
rosa_rugosa Rorug02G0423400 Rorug02G0423400 Rorug02G0423400
rosa_samantha Rh2AG484000 Rh2BG496200 Rh2CG470100 Rh2DG507100
rosa_wichuraiana Rw2G039660

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 1 cut(s) 2518
Acc36I ACCTGC 2 cut(s) 1507, 2519
AccBSI CCGCTC 2 cut(s) 481, 1844
AccI GTMKAC 2 cut(s) 1251, 1476
AccIII TCCGGA 1 cut(s) 1825
AclWI GGATC 3 cut(s) 207, 556, 1134
AcsI RAATTY 6 cut(s) 883, 1751, 1972, 2014, 2346, 2459
AcuI CTGAAG 1 cut(s) 1464
AdeI CACNNNGTG 1 cut(s) 1907
AfaI GTAC 5 cut(s) 234, 1555, 1614, 2028, 2035
AfiI CCNNNNNNNGG 3 cut(s) 1246, 1625, 2036
AgeI ACCGGT 1 cut(s) 2094
AhdI GACNNNNNGTC 2 cut(s) 382, 385
AjnI CCWGG 1 cut(s) 1942
Alw26I GTCTC 3 cut(s) 350, 1678, 2281
AlwI GGATC 3 cut(s) 207, 556, 1134
Aor13HI TCCGGA 1 cut(s) 1825
AoxI GGCC 3 cut(s) 552, 1370, 2353
ApeKI GCWGC 6 cut(s) 5, 8, 41, 323, 2229, 2514
ApoI RAATTY 6 cut(s) 883, 1751, 1972, 2014, 2346, 2459
ArsI GACNNNNNNTTYG 2 cut(s) 1051, 1083
AsiGI ACCGGT 1 cut(s) 2094
AspA2I CCTAGG 1 cut(s) 2138
AspLEI GCGC 2 cut(s) 2011, 2519
AspS9I GGNCC 2 cut(s) 186, 553
AsuHPI GGTGA 4 cut(s) 344, 350, 647, 1919
AvaII GGWCC 1 cut(s) 186
AvrII CCTAGG 1 cut(s) 2138
BaeI ACNNNNGTAYC 2 cut(s) 2010, 2043
BanII GRGCYC 1 cut(s) 1590
BauI CACGAG 1 cut(s) 191
BbsI GAAGAC 3 cut(s) 310, 1152, 1934
BbvI GCAGC 4 cut(s) 53, 310, 2241, 2501
BccI CCATC 8 cut(s) 11, 35, 323, 329, 449, 1204, 1798, 2444
BceAI ACGGC 4 cut(s) 278, 533, 980, 1018
BcgI CGANNNNNNTGC 4 cut(s) 272, 306, 1294, 1328
BciT130I CCWGG 1 cut(s) 1944
BclI TGATCA 1 cut(s) 1342
BcoDI GTCTC 3 cut(s) 350, 1678, 2281
BfaI CTAG 5 cut(s) 1191, 1359, 1535, 1686, 2139
BfmI CTRYAG 1 cut(s) 2309
BfuAI ACCTGC 2 cut(s) 1507, 2519
BisI GCNGC 9 cut(s) 6, 9, 42, 141, 144, 324, 1051, 2230, 2515
BlnI CCTAGG 1 cut(s) 2138
BlsI GCNGC 9 cut(s) 7, 10, 43, 142, 145, 325, 1052, 2231, 2516
BmcAI AGTACT 1 cut(s) 1555
Bme1390I CCNGG 1 cut(s) 1944
Bme18I GGWCC 1 cut(s) 186
BmeRI GACNNNNNGTC 2 cut(s) 382, 385
BmgT120I GGNCC 2 cut(s) 186, 553
BmiI GGNNCC 3 cut(s) 188, 555, 1294
BmrFI CCNGG 1 cut(s) 1944
BmrI ACTGGG 2 cut(s) 980, 1584
BmsI GCATC 4 cut(s) 39, 331, 1012, 2313
BmuI ACTGGG 2 cut(s) 980, 1584
BpiI GAAGAC 3 cut(s) 310, 1152, 1934
BpmI CTGGAG 1 cut(s) 1680
Bpu10I CCTNAGC 1 cut(s) 972
BpuEI CTTGAG 2 cut(s) 995, 1542
Bsa29I ATCGAT 2 cut(s) 453, 530
BsaBI GATNNNNATC 1 cut(s) 2202
BsaI GGTCTC 1 cut(s) 350
BsaJI CCNNGG 6 cut(s) 57, 549, 1142, 1242, 1943, 2138
BsaWI WCCGGW 3 cut(s) 400, 1825, 2094
BsaXI ACNNNNNCTCC 2 cut(s) 1554, 1584
Bsc4I CCNNNNNNNGG 3 cut(s) 1246, 1625, 2036
Bse118I RCCGGY 1 cut(s) 2094
Bse1I ACTGG 6 cut(s) 986, 1590, 1663, 1918, 1953, 2478
Bse3DI GCAATG 1 cut(s) 1644
Bse8I GATNNNNATC 1 cut(s) 2202
BseAI TCCGGA 1 cut(s) 1825
BseBI CCWGG 1 cut(s) 1944
BseCI ATCGAT 2 cut(s) 453, 530
BseDI CCNNGG 6 cut(s) 57, 549, 1142, 1242, 1943, 2138
BseGI GGATG 5 cut(s) 27, 481, 880, 1615, 2455
BseJI GATNNNNATC 1 cut(s) 2202
BseLI CCNNNNNNNGG 3 cut(s) 1246, 1625, 2036
BseMI GCAATG 1 cut(s) 1644
BseMII CTCAG 5 cut(s) 273, 336, 528, 1191, 1358
BseNI ACTGG 6 cut(s) 986, 1590, 1663, 1918, 1953, 2478
BseRI GAGGAG 2 cut(s) 368, 740
BseXI GCAGC 4 cut(s) 53, 310, 2241, 2501
BseYI CCCAGC 1 cut(s) 419
BsgI GTGCAG 3 cut(s) 888, 1754, 1887
BshFI GGCC 3 cut(s) 554, 1372, 2355
BshTI ACCGGT 1 cut(s) 2094
BshVI ATCGAT 2 cut(s) 453, 530
BsiSI CCGG 3 cut(s) 401, 1826, 2095
BslFI GGGAC 1 cut(s) 172
BslI CCNNNNNNNGG 3 cut(s) 1246, 1625, 2036
BsmAI GTCTC 3 cut(s) 350, 1678, 2281
BsmFI GGGAC 1 cut(s) 172
BsmI GAATGC 6 cut(s) 805, 1005, 1512, 1711, 1939, 2374
BsnI GGCC 3 cut(s) 554, 1372, 2355
Bso31I GGTCTC 1 cut(s) 350
Bsp1286I GDGCHC 1 cut(s) 1590
Bsp13I TCCGGA 1 cut(s) 1825
Bsp143I GATC 6 cut(s) 212, 527, 561, 1126, 1342, 2334
BspANI GGCC 3 cut(s) 554, 1372, 2355
BspCNI CTCAG 5 cut(s) 272, 337, 529, 1192, 1359
BspDI ATCGAT 2 cut(s) 453, 530
BspEI TCCGGA 1 cut(s) 1825
BspHI TCATGA 1 cut(s) 1018
BspLI GGNNCC 3 cut(s) 188, 555, 1294
BspMI ACCTGC 2 cut(s) 1507, 2519
BspPI GGATC 3 cut(s) 207, 556, 1134
BspTNI GGTCTC 1 cut(s) 350
BsrBI CCGCTC 2 cut(s) 481, 1844
BsrDI GCAATG 1 cut(s) 1644
BsrFI RCCGGY 1 cut(s) 2094
BsrI ACTGG 6 cut(s) 986, 1590, 1663, 1918, 1953, 2478
BssAI RCCGGY 1 cut(s) 2094
BssECI CCNNGG 6 cut(s) 57, 549, 1142, 1242, 1943, 2138
BssMI GATC 6 cut(s) 212, 527, 561, 1126, 1342, 2334
BssSI CACGAG 1 cut(s) 191
BssT1I CCWWGG 2 cut(s) 1142, 2138
Bst2BI CACGAG 1 cut(s) 191
Bst2UI CCWGG 1 cut(s) 1944
Bst4CI ACNGT 8 cut(s) 58, 88, 166, 430, 437, 895, 1223, 1570
Bst6I CTCTTC 3 cut(s) 518, 1252, 1681
BstC8I GCNNGC 2 cut(s) 1055, 1866
BstDEI CTNAG 7 cut(s) 259, 345, 537, 972, 1136, 1200, 1367
BstDSI CCRYGG 3 cut(s) 57, 549, 1242
BstF5I GGATG 5 cut(s) 27, 481, 880, 1615, 2455
BstHHI GCGC 2 cut(s) 2011, 2519
BstKTI GATC 6 cut(s) 215, 530, 564, 1129, 1345, 2337
BstMAI GTCTC 3 cut(s) 350, 1678, 2281
BstMBI GATC 6 cut(s) 212, 527, 561, 1126, 1342, 2334
BstMWI GCNNNNNNNGC 3 cut(s) 140, 487, 2229
BstNI CCWGG 1 cut(s) 1944
BstNSI RCATGY 2 cut(s) 1057, 1109
BstSCI CCNGG 1 cut(s) 1942
BstSFI CTRYAG 1 cut(s) 2309
BstV1I GCAGC 4 cut(s) 53, 310, 2241, 2501
BstV2I GAAGAC 3 cut(s) 310, 1152, 1934
BstX2I RGATCY 2 cut(s) 212, 561
BstXI CCANNNNNNTGG 1 cut(s) 455
BstYI RGATCY 2 cut(s) 212, 561
Bsu15I ATCGAT 2 cut(s) 453, 530
BsuRI GGCC 3 cut(s) 554, 1372, 2355
BsuTUI ATCGAT 2 cut(s) 453, 530
BtgI CCRYGG 3 cut(s) 57, 549, 1242
BtsCI GGATG 5 cut(s) 27, 481, 880, 1615, 2455
BtsI GCAGTG 3 cut(s) 288, 652, 876
BtsIMutI CAGTG 7 cut(s) 288, 652, 876, 993, 1597, 1960, 2290
BveI ACCTGC 2 cut(s) 1507, 2519
Cac8I GCNNGC 2 cut(s) 1055, 1866
CciI TCATGA 1 cut(s) 1018
CfoI GCGC 2 cut(s) 2011, 2519
Cfr10I RCCGGY 1 cut(s) 2094
Cfr13I GGNCC 2 cut(s) 186, 553
ClaI ATCGAT 2 cut(s) 453, 530
CseI GACGC 1 cut(s) 2298
Csp6I GTAC 5 cut(s) 233, 1554, 1613, 2027, 2034
CspAI ACCGGT 1 cut(s) 2094
CspCI CAANNNNNGTGG 2 cut(s) 1224, 1259
CviAII CATG 8 cut(s) 572, 1019, 1054, 1106, 1346, 1904, 2327, 2482
CviQI GTAC 5 cut(s) 233, 1554, 1613, 2027, 2034
DdeI CTNAG 7 cut(s) 259, 345, 537, 972, 1136, 1200, 1367
DpnI GATC 6 cut(s) 214, 529, 563, 1128, 1344, 2336
DpnII GATC 6 cut(s) 212, 527, 561, 1126, 1342, 2334
DraI TTTAAA 1 cut(s) 654
DraIII CACNNNGTG 1 cut(s) 1907
DriI GACNNNNNGTC 2 cut(s) 382, 385
Eam1104I CTCTTC 3 cut(s) 518, 1252, 1681
Eam1105I GACNNNNNGTC 2 cut(s) 382, 385
EarI CTCTTC 3 cut(s) 518, 1252, 1681
Eco130I CCWWGG 2 cut(s) 1142, 2138
Eco24I GRGCYC 1 cut(s) 1590
Eco31I GGTCTC 1 cut(s) 350
Eco47I GGWCC 1 cut(s) 186
Eco57I CTGAAG 1 cut(s) 1464
EcoRI GAATTC 1 cut(s) 883
EcoRII CCWGG 1 cut(s) 1942
EcoT14I CCWWGG 2 cut(s) 1142, 2138
EcoT22I ATGCAT 1 cut(s) 2328
EcoT38I GRGCYC 1 cut(s) 1590
ErhI CCWWGG 2 cut(s) 1142, 2138
FaeI CATG 8 cut(s) 575, 1022, 1057, 1109, 1349, 1907, 2330, 2485
FalI AAGNNNNNCTT 2 cut(s) 570, 602
FaqI GGGAC 1 cut(s) 172
FatI CATG 8 cut(s) 571, 1018, 1053, 1105, 1345, 1903, 2326, 2481
FauI CCCGC 1 cut(s) 564
FauNDI CATATG 1 cut(s) 1377
FbaI TGATCA 1 cut(s) 1342
FblI GTMKAC 2 cut(s) 1251, 1476
Fnu4HI GCNGC 9 cut(s) 6, 9, 42, 141, 144, 324, 1051, 2230, 2515
FokI GGATG 5 cut(s) 14, 488, 887, 1602, 2462
FriOI GRGCYC 1 cut(s) 1590
Fsp4HI GCNGC 9 cut(s) 6, 9, 42, 141, 144, 324, 1051, 2230, 2515
FspBI CTAG 5 cut(s) 1191, 1359, 1535, 1686, 2139
FspI TGCGCA 1 cut(s) 2518
GlaI GCGC 2 cut(s) 2010, 2518
GluI GCNGC 9 cut(s) 6, 9, 42, 141, 144, 324, 1051, 2230, 2515
GsaI CCCAGC 1 cut(s) 423
GsuI CTGGAG 1 cut(s) 1680
HaeIII GGCC 3 cut(s) 554, 1372, 2355
HapII CCGG 3 cut(s) 401, 1826, 2095
HgaI GACGC 1 cut(s) 2298
HhaI GCGC 2 cut(s) 2011, 2519
Hin1II CATG 8 cut(s) 575, 1022, 1057, 1109, 1349, 1907, 2330, 2485
Hin6I GCGC 2 cut(s) 2009, 2517
HinP1I GCGC 2 cut(s) 2009, 2517
HinfI GANTC 9 cut(s) 1015, 1087, 1181, 1298, 1381, 2050, 2134, 2374, 2434
HpaII CCGG 3 cut(s) 401, 1826, 2095
HphI GGTGA 4 cut(s) 344, 350, 647, 1919
Hpy99I CGWCG 4 cut(s) 107, 110, 299, 380
HpyCH4III ACNGT 8 cut(s) 58, 88, 166, 430, 437, 895, 1223, 1570
HpyCH4IV ACGT 1 cut(s) 63
HpyF10VI GCNNNNNNNGC 3 cut(s) 140, 487, 2229
HpyF3I CTNAG 7 cut(s) 259, 345, 537, 972, 1136, 1200, 1367
HpySE526I ACGT 1 cut(s) 63
Hsp92II CATG 8 cut(s) 575, 1022, 1057, 1109, 1349, 1907, 2330, 2485
HspAI GCGC 2 cut(s) 2009, 2517
Kpn2I TCCGGA 1 cut(s) 1825
Ksp22I TGATCA 1 cut(s) 1342
Kzo9I GATC 6 cut(s) 212, 527, 561, 1126, 1342, 2334
LmnI GCTCC 4 cut(s) 520, 1562, 1628, 1661
Lsp1109I GCAGC 4 cut(s) 53, 310, 2241, 2501
LweI GCATC 4 cut(s) 39, 331, 1012, 2313
MaeI CTAG 5 cut(s) 1191, 1359, 1535, 1686, 2139
MaeII ACGT 1 cut(s) 63
MaeIII GTNAC 6 cut(s) 147, 166, 889, 1731, 1846, 2142
MalI GATC 6 cut(s) 214, 529, 563, 1128, 1344, 2336
MbiI CCGCTC 2 cut(s) 481, 1844
MboI GATC 6 cut(s) 212, 527, 561, 1126, 1342, 2334
MfeI CAATTG 2 cut(s) 1275, 2412
MflI RGATCY 2 cut(s) 212, 561
MhlI GDGCHC 1 cut(s) 1590
MlyI GAGTC 3 cut(s) 1307, 1375, 2044
Mph1103I ATGCAT 1 cut(s) 2328
MroI TCCGGA 1 cut(s) 1825
MseI TTAA 9 cut(s) 606, 653, 768, 791, 819, 1350, 1985, 2127, 2393
MslI CAYNNNNRTG 1 cut(s) 453
MspA1I CMGCKG 1 cut(s) 1758
MspI CCGG 3 cut(s) 401, 1826, 2095
MspR9I CCNGG 1 cut(s) 1944
MunI CAATTG 2 cut(s) 1275, 2412
Mva1269I GAATGC 6 cut(s) 805, 1005, 1512, 1711, 1939, 2374
MvaI CCWGG 1 cut(s) 1944
MwoI GCNNNNNNNGC 3 cut(s) 140, 487, 2229
NdeI CATATG 1 cut(s) 1377
NdeII GATC 6 cut(s) 212, 527, 561, 1126, 1342, 2334
NlaIII CATG 8 cut(s) 575, 1022, 1057, 1109, 1349, 1907, 2330, 2485
NlaIV GGNNCC 3 cut(s) 188, 555, 1294
NmuCI GTSAC 3 cut(s) 166, 1731, 2142
NsbI TGCGCA 1 cut(s) 2518
NsiI ATGCAT 1 cut(s) 2328
NspI RCATGY 2 cut(s) 1057, 1109
PaeI GCATGC 1 cut(s) 1057
PagI TCATGA 1 cut(s) 1018
PcsI WCGNNNNNNNCGW 1 cut(s) 450
PctI GAATGC 6 cut(s) 805, 1005, 1512, 1711, 1939, 2374
PfeI GAWTC 6 cut(s) 1015, 1087, 1181, 2134, 2374, 2434
PflFI GACNNNGTC 1 cut(s) 1472
PinAI ACCGGT 1 cut(s) 2094
PkrI GCNGC 9 cut(s) 7, 10, 43, 142, 145, 325, 1052, 2231, 2516
PleI GAGTC 3 cut(s) 1306, 1375, 2044
PpsI GAGTC 3 cut(s) 1306, 1375, 2044
Psp6I CCWGG 1 cut(s) 1942
PspFI CCCAGC 1 cut(s) 419
PspGI CCWGG 1 cut(s) 1942
PspN4I GGNNCC 3 cut(s) 188, 555, 1294
PspPI GGNCC 2 cut(s) 186, 553
PsuI RGATCY 2 cut(s) 212, 561
PsyI GACNNNGTC 1 cut(s) 1472
RsaI GTAC 5 cut(s) 234, 1555, 1614, 2028, 2035
RsaNI GTAC 5 cut(s) 233, 1554, 1613, 2027, 2034
RseI CAYNNNNRTG 1 cut(s) 453
SaqAI TTAA 9 cut(s) 606, 653, 768, 791, 819, 1350, 1985, 2127, 2393
SatI GCNGC 9 cut(s) 6, 9, 42, 141, 144, 324, 1051, 2230, 2515
Sau3AI GATC 6 cut(s) 212, 527, 561, 1126, 1342, 2334
Sau96I GGNCC 2 cut(s) 186, 553
ScaI AGTACT 1 cut(s) 1555
SchI GAGTC 3 cut(s) 1307, 1375, 2044
ScrFI CCNGG 1 cut(s) 1944
SduI GDGCHC 1 cut(s) 1590
SfaNI GCATC 4 cut(s) 39, 331, 1012, 2313
SfcI CTRYAG 1 cut(s) 2309
SinI GGWCC 1 cut(s) 186
SmiMI CAYNNNNRTG 1 cut(s) 453
SmlI CTYRAG 2 cut(s) 1010, 1557
SmoI CTYRAG 2 cut(s) 1010, 1557
SphI GCATGC 1 cut(s) 1057
SspI AATATT 1 cut(s) 1354
SspMI CTAG 5 cut(s) 1191, 1359, 1535, 1686, 2139
StyD4I CCNGG 1 cut(s) 1942
StyI CCWWGG 2 cut(s) 1142, 2138
TaaI ACNGT 8 cut(s) 58, 88, 166, 430, 437, 895, 1223, 1570
TaiI ACGT 1 cut(s) 66
TaqI TCGA 8 cut(s) 282, 297, 453, 509, 530, 959, 1467, 2048
TaqII GACCGA 2 cut(s) 1537, 2274
TatI WGTACW 1 cut(s) 1553
TauI GCSGC 3 cut(s) 143, 146, 1053
TfiI GAWTC 6 cut(s) 1015, 1087, 1181, 2134, 2374, 2434
Tru1I TTAA 9 cut(s) 606, 653, 768, 791, 819, 1350, 1985, 2127, 2393
Tru9I TTAA 9 cut(s) 606, 653, 768, 791, 819, 1350, 1985, 2127, 2393
TscAI CASTG 7 cut(s) 295, 652, 876, 993, 1597, 1960, 2290
TseFI GTSAC 3 cut(s) 166, 1731, 2142
TseI GCWGC 6 cut(s) 5, 8, 41, 323, 2229, 2514
Tsp45I GTSAC 3 cut(s) 166, 1731, 2142
TspDTI ATGAA 4 cut(s) 588, 791, 1671, 2285
TspGWI ACGGA 5 cut(s) 877, 1139, 1641, 1713, 2357
TspRI CASTG 7 cut(s) 295, 652, 876, 993, 1597, 1960, 2290
Tth111I GACNNNGTC 1 cut(s) 1472
VpaK11BI GGWCC 1 cut(s) 186
XapI RAATTY 6 cut(s) 883, 1751, 1972, 2014, 2346, 2459
XbaI TCTAGA 1 cut(s) 1534
XceI RCATGY 2 cut(s) 1057, 1109
XcmI CCANNNNNNNNNTGG 1 cut(s) 2324
XmaJI CCTAGG 1 cut(s) 2138
XmiI GTMKAC 2 cut(s) 1251, 1476
XspI CTAG 5 cut(s) 1191, 1359, 1535, 1686, 2139
ZrmI AGTACT 1 cut(s) 1555
Zsp2I ATGCAT 1 cut(s) 2328
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.