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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT3G58770 |
| fragaria_vesca | FvH4_6g37820 FvH4_6g37820 |
| malus_domestica | MD09G1155600.v1.1 MD17G1141700.v1.1 |
| prunus_persica | Prupe.3G170300_v2.0.a1 |
| pyrus_communis | pycom17g13500 |
| rosa_chinensis | RchiOBHm_Chr2g0150941 |
| rosa_laevigata | RLG00000020518 |
| rosa_multiflora | Rmu_sc0000185.1_g000030 |
| rosa_roxburghii | Rroxscaffold_2G00096830 |
| rosa_rugosa | Rorug02G0423400 Rorug02G0423400 Rorug02G0423400 |
| rosa_samantha | Rh2AG484000 Rh2BG496200 Rh2CG470100 Rh2DG507100 |
| rosa_wichuraiana | Rw2G039660 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AarI | CACCTGC | 2 cut(s) | 2755, 3502 |
| Acc36I | ACCTGC | 5 cut(s) | 1522, 2023, 2755, 2893, 3502 |
| AccB1I | GGYRCC | 2 cut(s) | 461, 523 |
| AccBSI | CCGCTC | 1 cut(s) | 439 |
| AccI | GTMKAC | 2 cut(s) | 87, 1263 |
| AccII | CGCG | 1 cut(s) | 41 |
| AclWI | GGATC | 5 cut(s) | 492, 1227, 1992, 2005, 3675 |
| AcoI | YGGCCR | 1 cut(s) | 901 |
| AcuI | CTGAAG | 3 cut(s) | 644, 3026, 3180 |
| AcvI | CACGTG | 2 cut(s) | 1508, 3422 |
| AcyI | GRCGYC | 1 cut(s) | 524 |
| AdeI | CACNNNGTG | 1 cut(s) | 1925 |
| AfaI | GTAC | 7 cut(s) | 38, 610, 669, 1434, 1728, 2274, 3730 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 1258, 1643 |
| AflIII | ACRYGT | 4 cut(s) | 63, 423, 1476, 3421 |
| AhlI | ACTAGT | 1 cut(s) | 1394 |
| AjiI | CACGTC | 2 cut(s) | 64, 426 |
| AjnI | CCWGG | 3 cut(s) | 1324, 1971, 2268 |
| Alw21I | GWGCWC | 5 cut(s) | 186, 2152, 2169, 2782, 3487 |
| Alw26I | GTCTC | 4 cut(s) | 215, 542, 1758, 2049 |
| Alw44I | GTGCAC | 2 cut(s) | 2165, 2778 |
| AlwI | GGATC | 5 cut(s) | 492, 1227, 1992, 2005, 3675 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 1747 |
| Ama87I | CYCGRG | 1 cut(s) | 1572 |
| AoxI | GGCC | 7 cut(s) | 443, 471, 483, 901, 1382, 3010, 3683 |
| ApaLI | GTGCAC | 2 cut(s) | 2165, 2778 |
| ApeKI | GCWGC | 6 cut(s) | 1247, 1451, 1502, 2193, 2682, 2905 |
| Asp700I | GAANNNNTTC | 2 cut(s) | 261, 2231 |
| AspA2I | CCTAGG | 1 cut(s) | 1532 |
| AspLEI | GCGC | 2 cut(s) | 254, 526 |
| AspS9I | GGNCC | 5 cut(s) | 54, 174, 484, 1145, 3611 |
| AsuC2I | CCSGG | 2 cut(s) | 336, 353 |
| AsuII | TTCGAA | 2 cut(s) | 369, 1689 |
| AsuNHI | GCTAGC | 1 cut(s) | 3089 |
| AvaI | CYCGRG | 1 cut(s) | 1572 |
| AvaII | GGWCC | 4 cut(s) | 54, 174, 1145, 3611 |
| AvrII | CCTAGG | 1 cut(s) | 1532 |
| AxyI | CCTNAGG | 3 cut(s) | 2310, 2569, 3069 |
| BaeGI | GKGCMC | 2 cut(s) | 2169, 2782 |
| BamHI | GGATCC | 1 cut(s) | 1997 |
| BanI | GGYRCC | 2 cut(s) | 461, 523 |
| BanII | GRGCYC | 1 cut(s) | 186 |
| BauI | CACGAG | 1 cut(s) | 395 |
| BbrPI | CACGTG | 2 cut(s) | 1508, 3422 |
| BbsI | GAAGAC | 3 cut(s) | 588, 3336, 3573 |
| Bbv12I | GWGCWC | 5 cut(s) | 186, 2152, 2169, 2782, 3487 |
| BbvCI | CCTCAGC | 1 cut(s) | 3216 |
| BbvI | GCAGC | 6 cut(s) | 1259, 1438, 1489, 2205, 2694, 2917 |
| BccI | CCATC | 9 cut(s) | 285, 509, 1762, 1820, 2414, 2428, 2517, 2989, 3548 |
| BceAI | ACGGC | 4 cut(s) | 275, 374, 888, 3102 |
| BcgI | CGANNNNNNTGC | 8 cut(s) | 321, 349, 355, 383, 1600, 1634, 3420, 3454 |
| BciT130I | CCWGG | 3 cut(s) | 1326, 1973, 2270 |
| BclI | TGATCA | 3 cut(s) | 757, 1354, 1777 |
| BcnI | CCSGG | 2 cut(s) | 336, 353 |
| BcoDI | GTCTC | 4 cut(s) | 215, 542, 1758, 2049 |
| BcuI | ACTAGT | 1 cut(s) | 1394 |
| BfmI | CTRYAG | 4 cut(s) | 1989, 3274, 3627, 3679 |
| BfoI | RGCGCY | 2 cut(s) | 255, 527 |
| BfuAI | ACCTGC | 5 cut(s) | 1522, 2023, 2755, 2893, 3502 |
| BglII | AGATCT | 1 cut(s) | 3762 |
| BlnI | CCTAGG | 1 cut(s) | 1532 |
| BmcAI | AGTACT | 1 cut(s) | 669 |
| Bme1390I | CCNGG | 5 cut(s) | 336, 353, 1326, 1973, 2270 |
| Bme18I | GGWCC | 4 cut(s) | 54, 174, 1145, 3611 |
| BmeT110I | CYCGRG | 1 cut(s) | 1572 |
| BmgBI | CACGTC | 2 cut(s) | 64, 426 |
| BmgT120I | GGNCC | 5 cut(s) | 54, 174, 484, 1145, 3611 |
| BmiI | GGNNCC | 8 cut(s) | 176, 463, 486, 525, 1603, 1999, 2592, 3613 |
| BmrFI | CCNGG | 5 cut(s) | 336, 353, 1326, 1973, 2270 |
| BmrI | ACTGGG | 1 cut(s) | 3243 |
| BmsI | GCATC | 6 cut(s) | 201, 522, 880, 1642, 2243, 2917 |
| BmtI | GCTAGC | 1 cut(s) | 3093 |
| BmuI | ACTGGG | 1 cut(s) | 3243 |
| BpiI | GAAGAC | 3 cut(s) | 588, 3336, 3573 |
| BpmI | CTGGAG | 5 cut(s) | 822, 1443, 1987, 2604, 2680 |
| Bpu10I | CCTNAGC | 1 cut(s) | 3216 |
| Bpu14I | TTCGAA | 2 cut(s) | 369, 1689 |
| BpuEI | CTTGAG | 1 cut(s) | 1001 |
| BpuMI | CCSGG | 2 cut(s) | 336, 353 |
| Bsa29I | ATCGAT | 1 cut(s) | 1620 |
| BsaAI | YACGTR | 2 cut(s) | 1508, 3422 |
| BsaHI | GRCGYC | 1 cut(s) | 524 |
| BsaJI | CCNNGG | 8 cut(s) | 57, 335, 468, 480, 1532, 1642, 1972, 3020 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 3367, 3397 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 1258, 1643 |
| Bse118I | RCCGGY | 1 cut(s) | 445 |
| Bse1I | ACTGG | 8 cut(s) | 839, 904, 1795, 1862, 2004, 2895, 3191, 3249 |
| Bse21I | CCTNAGG | 3 cut(s) | 2310, 2569, 3069 |
| Bse3DI | GCAATG | 1 cut(s) | 2757 |
| BseBI | CCWGG | 3 cut(s) | 1326, 1973, 2270 |
| BseCI | ATCGAT | 1 cut(s) | 1620 |
| BseDI | CCNNGG | 8 cut(s) | 57, 335, 468, 480, 1532, 1642, 1972, 3020 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 1258, 1643 |
| BseMI | GCAATG | 1 cut(s) | 2757 |
| BseMII | CTCAG | 7 cut(s) | 1649, 2744, 2843, 3083, 3212, 3230, 3758 |
| BseNI | ACTGG | 8 cut(s) | 839, 904, 1795, 1862, 2004, 2895, 3191, 3249 |
| BseRI | GAGGAG | 6 cut(s) | 233, 323, 449, 471, 2989, 3057 |
| BseSI | GKGCMC | 2 cut(s) | 2169, 2782 |
| BseXI | GCAGC | 6 cut(s) | 1259, 1438, 1489, 2205, 2694, 2917 |
| BsgI | GTGCAG | 3 cut(s) | 1488, 1638, 1772 |
| Bsh1236I | CGCG | 1 cut(s) | 41 |
| Bsh1285I | CGRYCG | 1 cut(s) | 190 |
| BshFI | GGCC | 7 cut(s) | 445, 473, 485, 903, 1384, 3012, 3685 |
| BshNI | GGYRCC | 2 cut(s) | 461, 523 |
| BshVI | ATCGAT | 1 cut(s) | 1620 |
| BsiEI | CGRYCG | 1 cut(s) | 190 |
| BsiHKAI | GWGCWC | 5 cut(s) | 186, 2152, 2169, 2782, 3487 |
| BsiHKCI | CYCGRG | 1 cut(s) | 1572 |
| BsiSI | CCGG | 3 cut(s) | 335, 353, 446 |
| BslFI | GGGAC | 6 cut(s) | 63, 160, 2310, 3231, 3464, 3597 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 1258, 1643 |
| BsmAI | GTCTC | 4 cut(s) | 215, 542, 1758, 2049 |
| BsmBI | CGTCTC | 1 cut(s) | 542 |
| BsmFI | GGGAC | 6 cut(s) | 63, 160, 2310, 3231, 3464, 3597 |
| BsmI | GAATGC | 2 cut(s) | 1527, 2231 |
| BsnI | GGCC | 7 cut(s) | 445, 473, 485, 903, 1384, 3012, 3685 |
| BsoBI | CYCGRG | 1 cut(s) | 1572 |
| Bsp119I | TTCGAA | 2 cut(s) | 369, 1689 |
| Bsp1286I | GDGCHC | 5 cut(s) | 186, 2152, 2169, 2782, 3487 |
| Bsp1407I | TGTACA | 2 cut(s) | 1726, 3728 |
| Bsp19I | CCATGG | 1 cut(s) | 1642 |
| BspANI | GGCC | 7 cut(s) | 445, 473, 485, 903, 1384, 3012, 3685 |
| BspCNI | CTCAG | 7 cut(s) | 1650, 2743, 2842, 3082, 3211, 3229, 3757 |
| BspDI | ATCGAT | 1 cut(s) | 1620 |
| BspFNI | CGCG | 1 cut(s) | 41 |
| BspHI | TCATGA | 1 cut(s) | 97 |
| BspLI | GGNNCC | 8 cut(s) | 176, 463, 486, 525, 1603, 1999, 2592, 3613 |
| BspMAI | CTGCAG | 2 cut(s) | 3631, 3683 |
| BspMI | ACCTGC | 5 cut(s) | 1522, 2023, 2755, 2893, 3502 |
| BspOI | GCTAGC | 1 cut(s) | 3093 |
| BspPI | GGATC | 5 cut(s) | 492, 1227, 1992, 2005, 3675 |
| BspT104I | TTCGAA | 2 cut(s) | 369, 1689 |
| BspT107I | GGYRCC | 2 cut(s) | 461, 523 |
| BsrBI | CCGCTC | 1 cut(s) | 439 |
| BsrDI | GCAATG | 1 cut(s) | 2757 |
| BsrFI | RCCGGY | 1 cut(s) | 445 |
| BsrGI | TGTACA | 2 cut(s) | 1726, 3728 |
| BsrI | ACTGG | 8 cut(s) | 839, 904, 1795, 1862, 2004, 2895, 3191, 3249 |
| BssAI | RCCGGY | 1 cut(s) | 445 |
| BssECI | CCNNGG | 8 cut(s) | 57, 335, 468, 480, 1532, 1642, 1972, 3020 |
| BssNI | GRCGYC | 1 cut(s) | 524 |
| BssSI | CACGAG | 1 cut(s) | 395 |
| BssT1I | CCWWGG | 5 cut(s) | 468, 480, 1532, 1642, 3020 |
| Bst2BI | CACGAG | 1 cut(s) | 395 |
| Bst2UI | CCWGG | 3 cut(s) | 1326, 1973, 2270 |
| Bst6I | CTCTTC | 7 cut(s) | 446, 488, 653, 672, 938, 1264, 3176 |
| BstACI | GRCGYC | 1 cut(s) | 524 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 2253 |
| BstAUI | TGTACA | 2 cut(s) | 1726, 3728 |
| BstBAI | YACGTR | 2 cut(s) | 1508, 3422 |
| BstBI | TTCGAA | 2 cut(s) | 369, 1689 |
| BstC8I | GCNNGC | 9 cut(s) | 126, 1315, 1525, 2903, 3010, 3014, 3033, 3091, 3683 |
| BstDSI | CCRYGG | 1 cut(s) | 1642 |
| BstEII | GGTNACC | 1 cut(s) | 3186 |
| BstFNI | CGCG | 1 cut(s) | 41 |
| BstH2I | RGCGCY | 2 cut(s) | 255, 527 |
| BstHHI | GCGC | 2 cut(s) | 254, 526 |
| BstMAI | GTCTC | 4 cut(s) | 215, 542, 1758, 2049 |
| BstMCI | CGRYCG | 1 cut(s) | 190 |
| BstMWI | GCNNNNNNNGC | 7 cut(s) | 329, 357, 532, 988, 2193, 2253, 3037 |
| BstNI | CCWGG | 3 cut(s) | 1326, 1973, 2270 |
| BstNSI | RCATGY | 5 cut(s) | 404, 1115, 1480, 3115, 3224 |
| BstPI | GGTNACC | 1 cut(s) | 3186 |
| BstSCI | CCNGG | 5 cut(s) | 334, 351, 1324, 1971, 2268 |
| BstSFI | CTRYAG | 4 cut(s) | 1989, 3274, 3627, 3679 |
| BstSLI | GKGCMC | 2 cut(s) | 2169, 2782 |
| BstUI | CGCG | 1 cut(s) | 41 |
| BstV1I | GCAGC | 6 cut(s) | 1259, 1438, 1489, 2205, 2694, 2917 |
| BstV2I | GAAGAC | 3 cut(s) | 588, 3336, 3573 |
| BstX2I | RGATCY | 3 cut(s) | 497, 1997, 3762 |
| BstYI | RGATCY | 3 cut(s) | 497, 1997, 3762 |
| Bsu15I | ATCGAT | 1 cut(s) | 1620 |
| Bsu36I | CCTNAGG | 3 cut(s) | 2310, 2569, 3069 |
| BsuRI | GGCC | 7 cut(s) | 445, 473, 485, 903, 1384, 3012, 3685 |
| BsuTUI | ATCGAT | 1 cut(s) | 1620 |
| BtgI | CCRYGG | 1 cut(s) | 1642 |
| BtgZI | GCGATG | 1 cut(s) | 487 |
| BtrI | CACGTC | 2 cut(s) | 64, 426 |
| BtsI | GCAGTG | 1 cut(s) | 2587 |
| BtsIMutI | CAGTG | 6 cut(s) | 150, 1240, 1655, 1853, 2398, 2587 |
| BveI | ACCTGC | 5 cut(s) | 1522, 2023, 2755, 2893, 3502 |
| Cac8I | GCNNGC | 9 cut(s) | 126, 1315, 1525, 2903, 3010, 3014, 3033, 3091, 3683 |
| CaiI | CAGNNNCTG | 1 cut(s) | 1747 |
| CciI | TCATGA | 1 cut(s) | 97 |
| CfoI | GCGC | 2 cut(s) | 254, 526 |
| Cfr10I | RCCGGY | 1 cut(s) | 445 |
| Cfr13I | GGNCC | 5 cut(s) | 54, 174, 484, 1145, 3611 |
| ClaI | ATCGAT | 1 cut(s) | 1620 |
| CsiI | ACCWGGT | 1 cut(s) | 2268 |
| Csp6I | GTAC | 7 cut(s) | 37, 609, 668, 1433, 1727, 2273, 3729 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 3006, 3041 |
| CviQI | GTAC | 7 cut(s) | 37, 609, 668, 1433, 1727, 2273, 3729 |
| DinI | GGCGCC | 1 cut(s) | 525 |
| DraIII | CACNNNGTG | 1 cut(s) | 1925 |
| EaeI | YGGCCR | 1 cut(s) | 901 |
| Eam1104I | CTCTTC | 7 cut(s) | 446, 488, 653, 672, 938, 1264, 3176 |
| EarI | CTCTTC | 7 cut(s) | 446, 488, 653, 672, 938, 1264, 3176 |
| EciI | GGCGGA | 2 cut(s) | 338, 2313 |
| Ecl136II | GAGCTC | 1 cut(s) | 184 |
| Eco130I | CCWWGG | 5 cut(s) | 468, 480, 1532, 1642, 3020 |
| Eco24I | GRGCYC | 1 cut(s) | 186 |
| Eco32I | GATATC | 1 cut(s) | 1542 |
| Eco47I | GGWCC | 4 cut(s) | 54, 174, 1145, 3611 |
| Eco53kI | GAGCTC | 1 cut(s) | 184 |
| Eco57I | CTGAAG | 3 cut(s) | 644, 3026, 3180 |
| Eco72I | CACGTG | 2 cut(s) | 1508, 3422 |
| Eco81I | CCTNAGG | 3 cut(s) | 2310, 2569, 3069 |
| Eco88I | CYCGRG | 1 cut(s) | 1572 |
| Eco91I | GGTNACC | 1 cut(s) | 3186 |
| EcoICRI | GAGCTC | 1 cut(s) | 184 |
| EcoO109I | RGGNCCY | 3 cut(s) | 54, 484, 3611 |
| EcoO65I | GGTNACC | 1 cut(s) | 3186 |
| EcoRI | GAATTC | 1 cut(s) | 2485 |
| EcoRII | CCWGG | 3 cut(s) | 1324, 1971, 2268 |
| EcoRV | GATATC | 1 cut(s) | 1542 |
| EcoT14I | CCWWGG | 5 cut(s) | 468, 480, 1532, 1642, 3020 |
| EcoT22I | ATGCAT | 1 cut(s) | 3150 |
| EcoT38I | GRGCYC | 1 cut(s) | 186 |
| EgeI | GGCGCC | 1 cut(s) | 525 |
| EheI | GGCGCC | 1 cut(s) | 525 |
| ErhI | CCWWGG | 5 cut(s) | 468, 480, 1532, 1642, 3020 |
| Esp3I | CGTCTC | 1 cut(s) | 542 |
| FaqI | GGGAC | 6 cut(s) | 63, 160, 2310, 3231, 3464, 3597 |
| FauI | CCCGC | 1 cut(s) | 3440 |
| FauNDI | CATATG | 1 cut(s) | 1802 |
| FbaI | TGATCA | 3 cut(s) | 757, 1354, 1777 |
| FblI | GTMKAC | 2 cut(s) | 87, 1263 |
| FriOI | GRGCYC | 1 cut(s) | 186 |
| GlaI | GCGC | 2 cut(s) | 253, 525 |
| GsuI | CTGGAG | 5 cut(s) | 822, 1443, 1987, 2604, 2680 |
| HaeII | RGCGCY | 2 cut(s) | 255, 527 |
| HaeIII | GGCC | 7 cut(s) | 445, 473, 485, 903, 1384, 3012, 3685 |
| HapII | CCGG | 3 cut(s) | 335, 353, 446 |
| HhaI | GCGC | 2 cut(s) | 254, 526 |
| Hin1I | GRCGYC | 1 cut(s) | 524 |
| Hin6I | GCGC | 2 cut(s) | 252, 524 |
| HinP1I | GCGC | 2 cut(s) | 252, 524 |
| HincII | GTYRAC | 1 cut(s) | 88 |
| HindII | GTYRAC | 1 cut(s) | 88 |
| HindIII | AAGCTT | 2 cut(s) | 722, 2426 |
| HpaII | CCGG | 3 cut(s) | 335, 353, 446 |
| Hpy99I | CGWCG | 3 cut(s) | 89, 92, 95 |
| HpyCH4IV | ACGT | 5 cut(s) | 63, 425, 1359, 1507, 3421 |
| HpyF10VI | GCNNNNNNNGC | 7 cut(s) | 329, 357, 532, 988, 2193, 2253, 3037 |
| HpySE526I | ACGT | 5 cut(s) | 63, 425, 1359, 1507, 3421 |
| Hsp92I | GRCGYC | 1 cut(s) | 524 |
| HspAI | GCGC | 2 cut(s) | 252, 524 |
| KasI | GGCGCC | 1 cut(s) | 523 |
| Ksp22I | TGATCA | 3 cut(s) | 757, 1354, 1777 |
| LmnI | GCTCC | 7 cut(s) | 436, 1679, 2184, 2596, 3070, 3482, 3632 |
| Lsp1109I | GCAGC | 6 cut(s) | 1259, 1438, 1489, 2205, 2694, 2917 |
| LweI | GCATC | 6 cut(s) | 201, 522, 880, 1642, 2243, 2917 |
| MabI | ACCWGGT | 1 cut(s) | 2268 |
| MaeII | ACGT | 5 cut(s) | 63, 425, 1359, 1507, 3421 |
| MbiI | CCGCTC | 1 cut(s) | 439 |
| MfeI | CAATTG | 2 cut(s) | 1254, 2382 |
| MflI | RGATCY | 3 cut(s) | 497, 1997, 3762 |
| MhlI | GDGCHC | 5 cut(s) | 186, 2152, 2169, 2782, 3487 |
| Mly113I | GGCGCC | 1 cut(s) | 524 |
| MlyI | GAGTC | 2 cut(s) | 140, 3587 |
| MmeI | TCCRAC | 2 cut(s) | 225, 290 |
| Mph1103I | ATGCAT | 1 cut(s) | 3150 |
| MroXI | GAANNNNTTC | 2 cut(s) | 261, 2231 |
| MseI | TTAA | 8 cut(s) | 639, 705, 2063, 2265, 2363, 2879, 3132, 3618 |
| MslI | CAYNNNNRTG | 2 cut(s) | 399, 765 |
| MspA1I | CMGCKG | 2 cut(s) | 1502, 1608 |
| MspI | CCGG | 3 cut(s) | 335, 353, 446 |
| MspR9I | CCNGG | 5 cut(s) | 336, 353, 1326, 1973, 2270 |
| MunI | CAATTG | 2 cut(s) | 1254, 2382 |
| Mva1269I | GAATGC | 2 cut(s) | 1527, 2231 |
| MvaI | CCWGG | 3 cut(s) | 1326, 1973, 2270 |
| MvnI | CGCG | 1 cut(s) | 41 |
| MwoI | GCNNNNNNNGC | 7 cut(s) | 329, 357, 532, 988, 2193, 2253, 3037 |
| NarI | GGCGCC | 1 cut(s) | 524 |
| NciI | CCSGG | 2 cut(s) | 336, 353 |
| NcoI | CCATGG | 1 cut(s) | 1642 |
| NdeI | CATATG | 1 cut(s) | 1802 |
| NheI | GCTAGC | 1 cut(s) | 3089 |
| NlaIV | GGNNCC | 8 cut(s) | 176, 463, 486, 525, 1603, 1999, 2592, 3613 |
| NmeAIII | GCCGAG | 3 cut(s) | 154, 532, 2479 |
| NmuCI | GTSAC | 7 cut(s) | 154, 895, 1749, 2636, 2733, 3186, 3417 |
| NsiI | ATGCAT | 1 cut(s) | 3150 |
| NspI | RCATGY | 5 cut(s) | 404, 1115, 1480, 3115, 3224 |
| NspV | TTCGAA | 2 cut(s) | 369, 1689 |
| PaeR7I | CTCGAG | 1 cut(s) | 1572 |
| PagI | TCATGA | 1 cut(s) | 97 |
| PaqCI | CACCTGC | 2 cut(s) | 2755, 3502 |
| PciI | ACATGT | 1 cut(s) | 1476 |
| PcsI | WCGNNNNNNNCGW | 3 cut(s) | 90, 402, 582 |
| PctI | GAATGC | 2 cut(s) | 1527, 2231 |
| PdmI | GAANNNNTTC | 2 cut(s) | 261, 2231 |
| PfeI | GAWTC | 9 cut(s) | 777, 1021, 1556, 1738, 2305, 2344, 2801, 3371, 3497 |
| PleI | GAGTC | 2 cut(s) | 139, 3586 |
| PluTI | GGCGCC | 1 cut(s) | 527 |
| PmaCI | CACGTG | 2 cut(s) | 1508, 3422 |
| PmlI | CACGTG | 2 cut(s) | 1508, 3422 |
| PpsI | GAGTC | 2 cut(s) | 139, 3586 |
| Ppu21I | YACGTR | 2 cut(s) | 1508, 3422 |
| PpuMI | RGGWCCY | 2 cut(s) | 54, 3611 |
| PscI | ACATGT | 1 cut(s) | 1476 |
| Psp124BI | GAGCTC | 1 cut(s) | 186 |
| Psp5II | RGGWCCY | 2 cut(s) | 54, 3611 |
| Psp6I | CCWGG | 3 cut(s) | 1324, 1971, 2268 |
| PspCI | CACGTG | 2 cut(s) | 1508, 3422 |
| PspEI | GGTNACC | 1 cut(s) | 3186 |
| PspGI | CCWGG | 3 cut(s) | 1324, 1971, 2268 |
| PspN4I | GGNNCC | 8 cut(s) | 176, 463, 486, 525, 1603, 1999, 2592, 3613 |
| PspPI | GGNCC | 5 cut(s) | 54, 174, 484, 1145, 3611 |
| PspPPI | RGGWCCY | 2 cut(s) | 54, 3611 |
| PspXI | VCTCGAGB | 1 cut(s) | 1572 |
| PstI | CTGCAG | 2 cut(s) | 3631, 3683 |
| PstNI | CAGNNNCTG | 1 cut(s) | 1747 |
| PsuI | RGATCY | 3 cut(s) | 497, 1997, 3762 |
| RsaI | GTAC | 7 cut(s) | 38, 610, 669, 1434, 1728, 2274, 3730 |
| RsaNI | GTAC | 7 cut(s) | 37, 609, 668, 1433, 1727, 2273, 3729 |
| RseI | CAYNNNNRTG | 2 cut(s) | 399, 765 |
| SacI | GAGCTC | 1 cut(s) | 186 |
| SalI | GTCGAC | 1 cut(s) | 86 |
| SaqAI | TTAA | 8 cut(s) | 639, 705, 2063, 2265, 2363, 2879, 3132, 3618 |
| Sau96I | GGNCC | 5 cut(s) | 54, 174, 484, 1145, 3611 |
| ScaI | AGTACT | 1 cut(s) | 669 |
| SchI | GAGTC | 2 cut(s) | 140, 3587 |
| ScrFI | CCNGG | 5 cut(s) | 336, 353, 1326, 1973, 2270 |
| SduI | GDGCHC | 5 cut(s) | 186, 2152, 2169, 2782, 3487 |
| SexAI | ACCWGGT | 1 cut(s) | 2268 |
| SfaNI | GCATC | 6 cut(s) | 201, 522, 880, 1642, 2243, 2917 |
| SfcI | CTRYAG | 4 cut(s) | 1989, 3274, 3627, 3679 |
| SfoI | GGCGCC | 1 cut(s) | 525 |
| Sfr274I | CTCGAG | 1 cut(s) | 1572 |
| SfuI | TTCGAA | 2 cut(s) | 369, 1689 |
| SgrDI | CGTCGACG | 1 cut(s) | 86 |
| SinI | GGWCC | 4 cut(s) | 54, 174, 1145, 3611 |
| SlaI | CTCGAG | 1 cut(s) | 1572 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 399, 765 |
| SmlI | CTYRAG | 2 cut(s) | 1016, 1572 |
| SmoI | CTYRAG | 2 cut(s) | 1016, 1572 |
| SpeI | ACTAGT | 1 cut(s) | 1394 |
| SspDI | GGCGCC | 1 cut(s) | 523 |
| SspI | AATATT | 1 cut(s) | 929 |
| SstI | GAGCTC | 1 cut(s) | 186 |
| StyD4I | CCNGG | 5 cut(s) | 334, 351, 1324, 1971, 2268 |
| StyI | CCWWGG | 5 cut(s) | 468, 480, 1532, 1642, 3020 |
| TaiI | ACGT | 5 cut(s) | 66, 428, 1362, 1510, 3424 |
| TatI | WGTACW | 4 cut(s) | 608, 667, 1726, 3728 |
| TauI | GCSGC | 4 cut(s) | 44, 529, 1387, 1611 |
| TfiI | GAWTC | 9 cut(s) | 777, 1021, 1556, 1738, 2305, 2344, 2801, 3371, 3497 |
| Tru1I | TTAA | 8 cut(s) | 639, 705, 2063, 2265, 2363, 2879, 3132, 3618 |
| Tru9I | TTAA | 8 cut(s) | 639, 705, 2063, 2265, 2363, 2879, 3132, 3618 |
| TscAI | CASTG | 6 cut(s) | 157, 1240, 1662, 1853, 2398, 2587 |
| TseFI | GTSAC | 7 cut(s) | 154, 895, 1749, 2636, 2733, 3186, 3417 |
| TseI | GCWGC | 6 cut(s) | 1247, 1451, 1502, 2193, 2682, 2905 |
| Tsp45I | GTSAC | 7 cut(s) | 154, 895, 1749, 2636, 2733, 3186, 3417 |
| TspGWI | ACGGA | 2 cut(s) | 1889, 2623 |
| TspRI | CASTG | 6 cut(s) | 157, 1240, 1662, 1853, 2398, 2587 |
| VneI | GTGCAC | 2 cut(s) | 2165, 2778 |
| VpaK11BI | GGWCC | 4 cut(s) | 54, 174, 1145, 3611 |
| XbaI | TCTAGA | 2 cut(s) | 1549, 2792 |
| XceI | RCATGY | 5 cut(s) | 404, 1115, 1480, 3115, 3224 |
| XcmI | CCANNNNNNNNNTGG | 2 cut(s) | 1845, 2177 |
| XhoI | CTCGAG | 1 cut(s) | 1572 |
| XmaJI | CCTAGG | 1 cut(s) | 1532 |
| XmiI | GTMKAC | 2 cut(s) | 87, 1263 |
| XmnI | GAANNNNTTC | 2 cut(s) | 261, 2231 |
| ZrmI | AGTACT | 1 cut(s) | 669 |
| Zsp2I | ATGCAT | 1 cut(s) | 3150 |