MD09G1164900.v1.1

7-dehydrocholesterol reductase

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr09
Physical Location & Seq
Forward (+)
13506292 .. 13512121
5830 bp
Loading structure...
UTR
Exon/CDS
Intron
MD09G1164900.v1.1.491

Sequence Viewer

Length: 1305 bp
ATGGGGGAGACGAAGACCGTACATTCGCCATTGGTGACGTACGCTTCCATGTTATCGCTGCTTTCTCTCTGCCCTCCATTTGTAATTCTACTATGGTATACAATGGTACATGCTGATGGCTCAATTCTGCAAACTTGGGATCACTTGAGGCAGCATGGACTGCAGGGGTTCATCGAAATCTGGCCCAGACCTACTGCCACTGCATGGAAGATTATTGCCTGTTACGGTGCTTTTGAGGCTGCGCTTCAGCTTCTTTTACCTGGAAAAAGGGTTGAGGGACCAATATCTCCAGCAGGGAATCAGCCTGTATACAAGGCAAATGGTATGGCAGCCTATTTTGTAACGTTGACTACCTACCTTGGCCTTTGGTGGTTTGGGATATTCAACCCTACAGTTGTTTATGATCATCTGGGAGAAATATTTTCAGCCCTTATTTTCGGAAGCTTCATTTTTTGTATTTTCCTGTACATAAAAGGCCATGTGGCACCATCTTCCACTGATTCTGGATCATCTGGGAATGCAATAATTGATTTCTATTGGGGCATGGAGTTGTATCCTCGAATTGGCAAATACTTTGATATCAAAGTTTTCACAAACTGCAGATTTGGGATGATGTCTTGGGCAGTTCTTGCTGTGACTTATTGCATAAAGCAGTATGAAGTCAATGGGAGAGTAGCTGACTCAATGCTTGTGAATACTATATTGATGCTGGTGTATGTCACAAAGTTTTTCTGGTGGGAGGCTGGATACTGGAATACAATGGATATCGCACATGATCGAGCGGGATTCTATATTTGCTGGGGTTGCTTGGTCTGGGTTCCATCTATTTACACTTCTCCCGGCATGTACCTGGTCAACCATCCTGTAAATCTTGGTACTCAGCTAGCACTTTTTATTCTGGCAGCCGGAATCCTTTGCATATACATCAACTATGATTGTGACAGGCAAAGGCAAGAATTTCGCAGAACTAATGGAAAATGCTTGGTTTGGGGGAGAGCTCCATCAAAGATAGTCGCTTCATACACTACCACATCTGGGGAAACAAAGACAAGCCTTCTTCTAACCTCAGGATGGTGGGGTTTATCTCGTCACTTCCATTATGTGCCAGAAATATCAGCTGCCTTTTTCTGGACTGTTCCAGCCCTCTTCAATCATTTTCTACCTTACTTCTATGTGATCTTCCTGACAATCCTTCTGCTTGACCGAGCAAAGAGGGATGATGACCGATGTCGCACCAAGTACGGCAAATACTGGAAGTCATATTGTCAGAAGGTTCCCTACAGGGTCATTCCCGGAATCTACTGA

Protein Analysis

435

Amino Acids

49.69

Weight (kDa)

8.85

Isoelectric Point (pI)

33.61

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
ERG4_ERG24 PF01222 40 - 434 6.6e-88 Ergosterol biosynthesis ERG4/ERG24 family
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0012401)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 484
AccB7I CCANNNNNTGG 1 cut(s) 204
AccBSI CCGCTC 1 cut(s) 782
AccI GTMKAC 2 cut(s) 98, 309
AciI CCGC 1 cut(s) 782
AclI AACGTT 1 cut(s) 344
AclWI GGATC 2 cut(s) 147, 514
AcsI RAATTY 1 cut(s) 956
AcuI CTGAAG 1 cut(s) 230
AfaI GTAC 7 cut(s) 21, 41, 108, 467, 848, 877, 1241
AfiI CCNNNNNNNGG 5 cut(s) 204, 563, 1035, 1071, 1128
AgsI TTSAA 2 cut(s) 385, 1150
AjnI CCWGG 2 cut(s) 259, 849
AluBI AGCT 6 cut(s) 250, 444, 677, 883, 998, 1118
AluI AGCT 6 cut(s) 250, 444, 677, 883, 998, 1118
Alw21I GWGCWC 1 cut(s) 1000
Alw26I GTCTC 1 cut(s) 2
AlwI GGATC 2 cut(s) 147, 514
AoxI GGCC 3 cut(s) 182, 361, 475
ApeKI GCWGC 6 cut(s) 58, 151, 239, 329, 902, 1118
ApoI RAATTY 1 cut(s) 956
ArsI GACNNNNNNTTYG 2 cut(s) 7, 39
AspLEI GCGC 1 cut(s) 244
AspS9I GGNCC 2 cut(s) 183, 278
AsuC2I CCSGG 2 cut(s) 840, 1293
AsuHPI GGTGA 1 cut(s) 46
AsuNHI GCTAGC 1 cut(s) 883
AvaII GGWCC 1 cut(s) 278
AxyI CCTNAGG 1 cut(s) 1066
BanI GGYRCC 1 cut(s) 484
BanII GRGCYC 1 cut(s) 1000
BarI GAAGNNNNNNTAC 2 cut(s) 1262, 1294
BbsI GAAGAC 1 cut(s) 20
Bbv12I GWGCWC 1 cut(s) 1000
BbvI GCAGC 6 cut(s) 45, 163, 226, 341, 914, 1105
BccI CCATC 6 cut(s) 110, 496, 829, 867, 1009, 1065
BceAI ACGGC 1 cut(s) 1258
BcgI CGANNNNNNTGC 2 cut(s) 941, 975
BciT130I CCWGG 2 cut(s) 261, 851
BciVI GTATCC 2 cut(s) 564, 740
BclI TGATCA 1 cut(s) 403
BcnI CCSGG 2 cut(s) 840, 1293
BcoDI GTCTC 1 cut(s) 2
BfaI CTAG 1 cut(s) 884
BfmI CTRYAG 4 cut(s) 161, 390, 598, 1279
BfuI GTATCC 2 cut(s) 564, 740
BisI GCNGC 6 cut(s) 59, 152, 240, 330, 903, 1119
BlsI GCNGC 6 cut(s) 60, 153, 241, 331, 904, 1120
Bme1390I CCNGG 4 cut(s) 261, 840, 851, 1293
Bme18I GGWCC 1 cut(s) 278
BmgT120I GGNCC 2 cut(s) 183, 278
BmiI GGNNCC 4 cut(s) 279, 486, 819, 1275
BmrFI CCNGG 4 cut(s) 261, 840, 851, 1293
BmsI GCATC 1 cut(s) 696
BmtI GCTAGC 1 cut(s) 887
BoxI GACNNNNGTC 1 cut(s) 1227
BpiI GAAGAC 1 cut(s) 20
BpmI CTGGAG 1 cut(s) 273
BpuEI CTTGAG 1 cut(s) 166
BpuMI CCSGG 2 cut(s) 840, 1293
BsaJI CCNNGG 1 cut(s) 358
Bsc4I CCNNNNNNNGG 5 cut(s) 204, 563, 1035, 1071, 1128
Bse1I ACTGG 2 cut(s) 755, 1256
Bse21I CCTNAGG 1 cut(s) 1066
BseBI CCWGG 2 cut(s) 261, 851
BseDI CCNNGG 1 cut(s) 358
BseGI GGATG 4 cut(s) 615, 859, 1076, 1222
BseLI CCNNNNNNNGG 5 cut(s) 204, 563, 1035, 1071, 1128
BseMII CTCAG 2 cut(s) 893, 1080
BseNI ACTGG 2 cut(s) 755, 1256
BseXI GCAGC 6 cut(s) 45, 163, 226, 341, 914, 1105
BseYI CCCAGC 1 cut(s) 798
BshFI GGCC 3 cut(s) 184, 363, 477
BshNI GGYRCC 1 cut(s) 484
BsiHKAI GWGCWC 1 cut(s) 1000
BsiSI CCGG 3 cut(s) 840, 906, 1293
BsiWI CGTACG 1 cut(s) 39
BslFI GGGAC 1 cut(s) 291
BslI CCNNNNNNNGG 5 cut(s) 204, 563, 1035, 1071, 1128
BsmAI GTCTC 1 cut(s) 2
BsmBI CGTCTC 1 cut(s) 2
BsmFI GGGAC 1 cut(s) 291
BsmI GAATGC 1 cut(s) 523
BsnI GGCC 3 cut(s) 184, 363, 477
Bsp1286I GDGCHC 1 cut(s) 1000
Bsp1407I TGTACA 1 cut(s) 465
Bsp143I GATC 5 cut(s) 139, 403, 506, 775, 1176
BspACI CCGC 1 cut(s) 782
BspANI GGCC 3 cut(s) 184, 363, 477
BspCNI CTCAG 2 cut(s) 892, 1079
BspLI GGNNCC 4 cut(s) 279, 486, 819, 1275
BspMAI CTGCAG 2 cut(s) 165, 602
BspOI GCTAGC 1 cut(s) 887
BspPI GGATC 2 cut(s) 147, 514
BspT107I GGYRCC 1 cut(s) 484
BsrBI CCGCTC 1 cut(s) 782
BsrGI TGTACA 1 cut(s) 465
BsrI ACTGG 2 cut(s) 755, 1256
BssECI CCNNGG 1 cut(s) 358
BssMI GATC 5 cut(s) 139, 403, 506, 775, 1176
BssNAI GTATAC 2 cut(s) 99, 310
BssT1I CCWWGG 1 cut(s) 358
Bst1107I GTATAC 2 cut(s) 99, 310
Bst2UI CCWGG 2 cut(s) 261, 851
Bst4CI ACNGT 4 cut(s) 19, 227, 394, 1135
Bst6I CTCTTC 1 cut(s) 1151
BstAPI GCANNNNNTGC 2 cut(s) 160, 629
BstAUI TGTACA 1 cut(s) 465
BstC8I GCNNGC 1 cut(s) 885
BstDEI CTNAG 2 cut(s) 879, 1066
BstF5I GGATG 4 cut(s) 615, 859, 1076, 1222
BstHHI GCGC 1 cut(s) 244
BstKTI GATC 5 cut(s) 142, 406, 509, 778, 1179
BstMAI GTCTC 1 cut(s) 2
BstMBI GATC 5 cut(s) 139, 403, 506, 775, 1176
BstMWI GCNNNNNNNGC 4 cut(s) 160, 236, 629, 804
BstNI CCWGG 2 cut(s) 261, 851
BstNSI RCATGY 2 cut(s) 113, 847
BstPAI GACNNNNGTC 1 cut(s) 1227
BstSCI CCNGG 4 cut(s) 259, 838, 849, 1291
BstSFI CTRYAG 4 cut(s) 161, 390, 598, 1279
BstV1I GCAGC 6 cut(s) 45, 163, 226, 341, 914, 1105
BstV2I GAAGAC 1 cut(s) 20
BstZ17I GTATAC 2 cut(s) 99, 310
Bsu36I CCTNAGG 1 cut(s) 1066
BsuI GTATCC 2 cut(s) 564, 740
BsuRI GGCC 3 cut(s) 184, 363, 477
BtsCI GGATG 4 cut(s) 615, 859, 1076, 1222
BtsI GCAGTG 1 cut(s) 198
BtsIMutI CAGTG 2 cut(s) 198, 495
Cac8I GCNNGC 1 cut(s) 885
CfoI GCGC 1 cut(s) 244
Cfr13I GGNCC 2 cut(s) 183, 278
CsiI ACCWGGT 1 cut(s) 849
Csp6I GTAC 7 cut(s) 20, 40, 107, 466, 847, 876, 1240
CviAII CATG 8 cut(s) 49, 110, 155, 204, 479, 544, 773, 844
CviQI GTAC 7 cut(s) 20, 40, 107, 466, 847, 876, 1240
DdeI CTNAG 2 cut(s) 879, 1066
DpnI GATC 5 cut(s) 141, 405, 508, 777, 1178
DpnII GATC 5 cut(s) 139, 403, 506, 775, 1176
Eam1104I CTCTTC 1 cut(s) 1151
EarI CTCTTC 1 cut(s) 1151
Ecl136II GAGCTC 1 cut(s) 998
Eco130I CCWWGG 1 cut(s) 358
Eco24I GRGCYC 1 cut(s) 1000
Eco32I GATATC 2 cut(s) 580, 766
Eco47I GGWCC 1 cut(s) 278
Eco53kI GAGCTC 1 cut(s) 998
Eco57I CTGAAG 1 cut(s) 230
Eco81I CCTNAGG 1 cut(s) 1066
EcoICRI GAGCTC 1 cut(s) 998
EcoRII CCWGG 2 cut(s) 259, 849
EcoRV GATATC 2 cut(s) 580, 766
EcoT14I CCWWGG 1 cut(s) 358
EcoT38I GRGCYC 1 cut(s) 1000
ErhI CCWWGG 1 cut(s) 358
Esp3I CGTCTC 1 cut(s) 2
FaeI CATG 8 cut(s) 52, 113, 158, 207, 482, 547, 776, 847
FaqI GGGAC 1 cut(s) 291
FatI CATG 8 cut(s) 48, 109, 154, 203, 478, 543, 772, 843
FauI CCCGC 1 cut(s) 775
FbaI TGATCA 1 cut(s) 403
FblI GTMKAC 2 cut(s) 98, 309
Fnu4HI GCNGC 6 cut(s) 59, 152, 240, 330, 903, 1119
FokI GGATG 4 cut(s) 622, 846, 1083, 1229
FriOI GRGCYC 1 cut(s) 1000
Fsp4HI GCNGC 6 cut(s) 59, 152, 240, 330, 903, 1119
FspBI CTAG 1 cut(s) 884
GlaI GCGC 1 cut(s) 243
GluI GCNGC 6 cut(s) 59, 152, 240, 330, 903, 1119
GsaI CCCAGC 1 cut(s) 802
GsuI CTGGAG 1 cut(s) 273
HaeIII GGCC 3 cut(s) 184, 363, 477
HapII CCGG 3 cut(s) 840, 906, 1293
HhaI GCGC 1 cut(s) 244
Hin1II CATG 8 cut(s) 52, 113, 158, 207, 482, 547, 776, 847
Hin6I GCGC 1 cut(s) 242
HinP1I GCGC 1 cut(s) 242
HincII GTYRAC 2 cut(s) 348, 856
HindII GTYRAC 2 cut(s) 348, 856
HindIII AAGCTT 1 cut(s) 442
HinfI GANTC 6 cut(s) 298, 500, 680, 786, 909, 1296
HpaII CCGG 3 cut(s) 840, 906, 1293
HphI GGTGA 1 cut(s) 46
Hpy166II GTNNAC 4 cut(s) 99, 310, 348, 856
Hpy188I TCNGA 2 cut(s) 440, 1269
Hpy188III TCNNGA 4 cut(s) 504, 1068, 1129, 1183
Hpy8I GTNNAC 4 cut(s) 99, 310, 348, 856
HpyAV CCTTC 3 cut(s) 1064, 1202, 1264
HpyCH4III ACNGT 4 cut(s) 19, 227, 394, 1135
HpyCH4IV ACGT 2 cut(s) 38, 344
HpyCH4V TGCA 7 cut(s) 130, 163, 203, 521, 600, 645, 918
HpyF10VI GCNNNNNNNGC 4 cut(s) 160, 236, 629, 804
HpyF3I CTNAG 2 cut(s) 879, 1066
HpySE526I ACGT 2 cut(s) 38, 344
Hsp92II CATG 8 cut(s) 52, 113, 158, 207, 482, 547, 776, 847
HspAI GCGC 1 cut(s) 242
Ksp22I TGATCA 1 cut(s) 403
Kzo9I GATC 5 cut(s) 139, 403, 506, 775, 1176
LmnI GCTCC 1 cut(s) 1003
Lsp1109I GCAGC 6 cut(s) 45, 163, 226, 341, 914, 1105
LweI GCATC 1 cut(s) 696
MabI ACCWGGT 1 cut(s) 849
MaeI CTAG 1 cut(s) 884
MaeII ACGT 2 cut(s) 38, 344
MaeIII GTNAC 7 cut(s) 34, 221, 340, 634, 718, 938, 1088
MalI GATC 5 cut(s) 141, 405, 508, 777, 1178
MbiI CCGCTC 1 cut(s) 782
MboI GATC 5 cut(s) 139, 403, 506, 775, 1176
MboII GAAGA 6 cut(s) 25, 220, 483, 1049, 1138, 1171
MhlI GDGCHC 1 cut(s) 1000
MluCI AATT 5 cut(s) 84, 123, 525, 561, 956
MlyI GAGTC 1 cut(s) 674
MnlI CCTC 9 cut(s) 84, 141, 229, 268, 567, 733, 1075, 1154, 1206
MslI CAYNNNNRTG 1 cut(s) 114
MspA1I CMGCKG 1 cut(s) 1118
MspI CCGG 3 cut(s) 840, 906, 1293
MspR9I CCNGG 4 cut(s) 261, 840, 851, 1293
Mva1269I GAATGC 1 cut(s) 523
MvaI CCWGG 2 cut(s) 261, 851
MwoI GCNNNNNNNGC 4 cut(s) 160, 236, 629, 804
NciI CCSGG 2 cut(s) 840, 1293
NdeII GATC 5 cut(s) 139, 403, 506, 775, 1176
NheI GCTAGC 1 cut(s) 883
NlaIII CATG 8 cut(s) 52, 113, 158, 207, 482, 547, 776, 847
NlaIV GGNNCC 4 cut(s) 279, 486, 819, 1275
NmuCI GTSAC 5 cut(s) 34, 634, 718, 938, 1088
NspI RCATGY 2 cut(s) 113, 847
PctI GAATGC 1 cut(s) 523
PfeI GAWTC 5 cut(s) 298, 500, 786, 909, 1296
Pfl23II CGTACG 1 cut(s) 39
PflMI CCANNNNNTGG 1 cut(s) 204
PfoI TCCNGGA 1 cut(s) 1291
PkrI GCNGC 6 cut(s) 60, 153, 241, 331, 904, 1120
PleI GAGTC 1 cut(s) 674
PpsI GAGTC 1 cut(s) 674
PshAI GACNNNNGTC 1 cut(s) 1227
Psp124BI GAGCTC 1 cut(s) 1000
Psp1406I AACGTT 1 cut(s) 344
Psp6I CCWGG 2 cut(s) 259, 849
PspFI CCCAGC 1 cut(s) 798
PspGI CCWGG 2 cut(s) 259, 849
PspLI CGTACG 1 cut(s) 39
PspN4I GGNNCC 4 cut(s) 279, 486, 819, 1275
PspPI GGNCC 2 cut(s) 183, 278
PstI CTGCAG 2 cut(s) 165, 602
PvuII CAGCTG 1 cut(s) 1118
RsaI GTAC 7 cut(s) 21, 41, 108, 467, 848, 877, 1241
RsaNI GTAC 7 cut(s) 20, 40, 107, 466, 847, 876, 1240
RseI CAYNNNNRTG 1 cut(s) 114
SacI GAGCTC 1 cut(s) 1000
SatI GCNGC 6 cut(s) 59, 152, 240, 330, 903, 1119
Sau3AI GATC 5 cut(s) 139, 403, 506, 775, 1176
Sau96I GGNCC 2 cut(s) 183, 278
SchI GAGTC 1 cut(s) 674
ScrFI CCNGG 4 cut(s) 261, 840, 851, 1293
SduI GDGCHC 1 cut(s) 1000
SexAI ACCWGGT 1 cut(s) 849
SfaNI GCATC 1 cut(s) 696
SfcI CTRYAG 4 cut(s) 161, 390, 598, 1279
SinI GGWCC 1 cut(s) 278
SmiMI CAYNNNNRTG 1 cut(s) 114
SmlI CTYRAG 1 cut(s) 145
SmoI CTYRAG 1 cut(s) 145
Sse9I AATT 5 cut(s) 84, 123, 525, 561, 956
SsiI CCGC 1 cut(s) 782
SspI AATATT 1 cut(s) 420
SspMI CTAG 1 cut(s) 884
SstI GAGCTC 1 cut(s) 1000
StyD4I CCNGG 4 cut(s) 259, 838, 849, 1291
StyI CCWWGG 1 cut(s) 358
TaaI ACNGT 4 cut(s) 19, 227, 394, 1135
TaiI ACGT 2 cut(s) 41, 347
TaqI TCGA 3 cut(s) 174, 559, 778
TaqII GACCGA 2 cut(s) 1218, 1239
TasI AATT 5 cut(s) 84, 123, 525, 561, 956
TatI WGTACW 1 cut(s) 465
TfiI GAWTC 5 cut(s) 298, 500, 786, 909, 1296
TscAI CASTG 2 cut(s) 205, 502
TseFI GTSAC 5 cut(s) 34, 634, 718, 938, 1088
TseI GCWGC 6 cut(s) 58, 151, 239, 329, 902, 1118
Tsp45I GTSAC 5 cut(s) 34, 634, 718, 938, 1088
TspDTI ATGAA 4 cut(s) 160, 436, 672, 1008
TspRI CASTG 2 cut(s) 205, 502
Van91I CCANNNNNTGG 1 cut(s) 204
VpaK11BI GGWCC 1 cut(s) 278
XapI RAATTY 1 cut(s) 956
XceI RCATGY 2 cut(s) 113, 847
XmiI GTMKAC 2 cut(s) 98, 309
XspI CTAG 1 cut(s) 884
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.