Prupe.3G022300_v2.0.a1

7-dehydrocholesterol reductase

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp03
Physical Location & Seq
Forward (+)
1658028 .. 1664427
6400 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.3G022300.2

Sequence Viewer

Length: 1305 bp
ATGGGGGAGACGAATACCGTACATTCACCATTGGTGACATATGCTTCCATGTTATCACTGCTTTGTCTTTGCCCTCCATTTGTAATTCTACTATGGTATACGATGGTACATGCAGATGGCTCTATTTCCCAAACTTGGGATTACTTAAAGCATCATGGTGTGCAGGGTTTCATTGAAATATGGCCCAGACCTACTGCCACTGCCTGGAAAATTATTGCCTGTTATGGTGCTTTTGAAGCTGCACTCCAGCTGCTTTTACCTGGAAAAAGGGTTGAGGGCCCAATTTCTCCAACAGGGAATCGACCTGTCTACAAGGCAAATGGTATGGCAGCATATTTTGTAACATTGGCTACCCACCTCGGCCTTTGGTGGTTTGGGATATTCAACCCTACAATTGTTTATGACCATTTGGGAGAAATTTTTTCAGCACTCATTTTCGGAAGCTTCATTTTCTGTATTCTCCTGTACATAAAAGGTCACCTGGCACCATCATCCACCGATTCTGGGTCTTCTGGGAATGCAATAATTGATTTCTACTGGGGAATGGAGCTGTATCCTCGAATTGGTAAAAACTTTGATATCAAAGTTTTCACAAACTGCAGATTTGGGATGATGTCTTGGGCAGTTCTTGCTGTGACCTATTGCATAAAGCAGTATGAAGTTAATGGGACAGTAGCTGATTCAATGCTTGTAAATACTATATTGATGCTGGTTTATGTGACGAAGTTCTTTTGGTGGGAGGCTGGATACTGGAATACAATGGATATTGCTCATGATCGAGCGGGCTTTTATATTTGCTGGGGTTGCTTGGTCTGGGTTCCATCTATTTATACTTCTCCTGGCATGTACCTGGTCAACCATCCTGTAAATCTTGGAACTCAGCTAGCACTTTTTATTTTGGTGGCCGGGATTCTTTGCATATACATCAACTATGATTGCGACAGGCAAAGGCAAGAATTTCGCAGAACAAATGGCAAATGCTTGGTTTGGGGGAAAGCTCCATCAAAGATTGTCGCTTCATACACTACCACATCTGGGGAAACAAAGACAAGCCTTCTTTTAACCTCAGGATGGTGGGGTTTATCTCGTCATTTCCATTATGTGCCAGAAATATCAGCTGCCTTTTTCTGGACTGTTCCAGCTCTTTTCAATCATTTTCTACCTTACTTCTACGTGGTGTTTCTTACCATCCTTCTACTTGACCGAGCCAAAAGGGATGACGATCGATGTCGGTCCAAGTACGGGAAATATTGGAAACTATATTGTCAGAAGGTGTCCTACAGGGTCATTCCTGGCATCTATTGA

Protein Analysis

435

Amino Acids

49.54

Weight (kDa)

8.74

Isoelectric Point (pI)

30.35

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0012401)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 484
AccB7I CCANNNNNTGG 1 cut(s) 204
AccBSI CCGCTC 1 cut(s) 782
AccI GTMKAC 2 cut(s) 98, 309
AciI CCGC 1 cut(s) 782
AcoI YGGCCR 1 cut(s) 903
AcsI RAATTY 2 cut(s) 417, 956
AfaI GTAC 5 cut(s) 21, 108, 467, 848, 1241
AfiI CCNNNNNNNGG 9 cut(s) 135, 136, 204, 504, 563, 1035, 1071, 1128, 1242
AgsI TTSAA 5 cut(s) 176, 236, 385, 684, 1150
AjnI CCWGG 6 cut(s) 203, 259, 480, 838, 849, 1291
AluBI AGCT 9 cut(s) 239, 250, 444, 550, 677, 883, 998, 1118, 1142
AluI AGCT 9 cut(s) 239, 250, 444, 550, 677, 883, 998, 1118, 1142
Alw26I GTCTC 1 cut(s) 2
AlwNI CAGNNNCTG 1 cut(s) 677
AoxI GGCC 4 cut(s) 182, 277, 361, 903
ApaI GGGCCC 1 cut(s) 281
ApeKI GCWGC 4 cut(s) 239, 250, 329, 1118
ApoI RAATTY 2 cut(s) 417, 956
AspS9I GGNCC 4 cut(s) 183, 277, 278, 1233
AsuC2I CCSGG 1 cut(s) 907
AsuHPI GGTGA 3 cut(s) 18, 46, 470
AsuNHI GCTAGC 1 cut(s) 883
AvaII GGWCC 1 cut(s) 1233
AxyI CCTNAGG 1 cut(s) 1066
BaeGI GKGCMC 1 cut(s) 281
BanI GGYRCC 1 cut(s) 484
BanII GRGCYC 1 cut(s) 281
BarI GAAGNNNNNNTAC 2 cut(s) 1262, 1294
BbsI GAAGAC 1 cut(s) 501
BbvI GCAGC 4 cut(s) 226, 237, 341, 1105
BccI CCATC 8 cut(s) 97, 110, 496, 829, 867, 1009, 1065, 1196
BcgI CGANNNNNNTGC 2 cut(s) 941, 975
BciT130I CCWGG 6 cut(s) 205, 261, 482, 840, 851, 1293
BciVI GTATCC 2 cut(s) 564, 740
BcnI CCSGG 1 cut(s) 907
BcoDI GTCTC 1 cut(s) 2
BfaI CTAG 1 cut(s) 884
BfmI CTRYAG 2 cut(s) 598, 1279
BfuI GTATCC 2 cut(s) 564, 740
BisI GCNGC 4 cut(s) 240, 251, 330, 1119
BlsI GCNGC 4 cut(s) 241, 252, 331, 1120
Bme1390I CCNGG 7 cut(s) 205, 261, 482, 840, 851, 907, 1293
Bme18I GGWCC 1 cut(s) 1233
BmgT120I GGNCC 4 cut(s) 183, 277, 278, 1233
BmiI GGNNCC 3 cut(s) 279, 486, 819
BmrFI CCNGG 7 cut(s) 205, 261, 482, 840, 851, 907, 1293
BmrI ACTGGG 1 cut(s) 547
BmsI GCATC 2 cut(s) 160, 696
BmtI GCTAGC 1 cut(s) 887
BmuI ACTGGG 1 cut(s) 547
BpiI GAAGAC 1 cut(s) 501
BpmI CTGGAG 1 cut(s) 230
BpuMI CCSGG 1 cut(s) 907
Bsa29I ATCGAT 1 cut(s) 1225
BsaAI YACGTR 1 cut(s) 1174
BsaBI GATNNNNATC 1 cut(s) 1221
BsaJI CCNNGG 1 cut(s) 358
Bsc4I CCNNNNNNNGG 9 cut(s) 135, 136, 204, 504, 563, 1035, 1071, 1128, 1242
Bse1I ACTGG 2 cut(s) 542, 755
Bse21I CCTNAGG 1 cut(s) 1066
Bse8I GATNNNNATC 1 cut(s) 1221
BseBI CCWGG 6 cut(s) 205, 261, 482, 840, 851, 1293
BseCI ATCGAT 1 cut(s) 1225
BseDI CCNNGG 1 cut(s) 358
BseGI GGATG 6 cut(s) 491, 615, 859, 1076, 1188, 1222
BseJI GATNNNNATC 1 cut(s) 1221
BseLI CCNNNNNNNGG 9 cut(s) 135, 136, 204, 504, 563, 1035, 1071, 1128, 1242
BseMII CTCAG 2 cut(s) 893, 1080
BseNI ACTGG 2 cut(s) 542, 755
BseSI GKGCMC 1 cut(s) 281
BseXI GCAGC 4 cut(s) 226, 237, 341, 1105
BseYI CCCAGC 1 cut(s) 798
BsgI GTGCAG 2 cut(s) 182, 225
Bsh1285I CGRYCG 1 cut(s) 1225
BshFI GGCC 4 cut(s) 184, 279, 363, 905
BshNI GGYRCC 1 cut(s) 484
BshVI ATCGAT 1 cut(s) 1225
BsiEI CGRYCG 1 cut(s) 1225
BsiSI CCGG 1 cut(s) 906
BslFI GGGAC 1 cut(s) 682
BslI CCNNNNNNNGG 9 cut(s) 135, 136, 204, 504, 563, 1035, 1071, 1128, 1242
BsmAI GTCTC 1 cut(s) 2
BsmBI CGTCTC 1 cut(s) 2
BsmFI GGGAC 1 cut(s) 682
BsmI GAATGC 1 cut(s) 523
BsnI GGCC 4 cut(s) 184, 279, 363, 905
Bsp120I GGGCCC 1 cut(s) 277
Bsp1286I GDGCHC 1 cut(s) 281
Bsp1407I TGTACA 1 cut(s) 465
Bsp143I GATC 2 cut(s) 775, 1222
BspACI CCGC 1 cut(s) 782
BspANI GGCC 4 cut(s) 184, 279, 363, 905
BspCNI CTCAG 2 cut(s) 892, 1079
BspDI ATCGAT 1 cut(s) 1225
BspHI TCATGA 1 cut(s) 772
BspLI GGNNCC 3 cut(s) 279, 486, 819
BspMAI CTGCAG 1 cut(s) 602
BspOI GCTAGC 1 cut(s) 887
BspT107I GGYRCC 1 cut(s) 484
BsrBI CCGCTC 1 cut(s) 782
BsrGI TGTACA 1 cut(s) 465
BsrI ACTGG 2 cut(s) 542, 755
BssECI CCNNGG 1 cut(s) 358
BssMI GATC 2 cut(s) 775, 1222
BssNAI GTATAC 1 cut(s) 99
Bst1107I GTATAC 1 cut(s) 99
Bst2UI CCWGG 6 cut(s) 205, 261, 482, 840, 851, 1293
Bst4CI ACNGT 3 cut(s) 19, 673, 1135
BstAPI GCANNNNNTGC 1 cut(s) 629
BstAUI TGTACA 1 cut(s) 465
BstBAI YACGTR 1 cut(s) 1174
BstC8I GCNNGC 2 cut(s) 784, 885
BstDEI CTNAG 2 cut(s) 879, 1066
BstEII GGTNACC 1 cut(s) 476
BstF5I GGATG 6 cut(s) 491, 615, 859, 1076, 1188, 1222
BstKTI GATC 2 cut(s) 778, 1225
BstMAI GTCTC 1 cut(s) 2
BstMBI GATC 2 cut(s) 775, 1222
BstMCI CGRYCG 1 cut(s) 1225
BstMWI GCNNNNNNNGC 3 cut(s) 236, 629, 804
BstNI CCWGG 6 cut(s) 205, 261, 482, 840, 851, 1293
BstNSI RCATGY 2 cut(s) 113, 847
BstPI GGTNACC 1 cut(s) 476
BstSCI CCNGG 7 cut(s) 203, 259, 480, 838, 849, 905, 1291
BstSFI CTRYAG 2 cut(s) 598, 1279
BstSLI GKGCMC 1 cut(s) 281
BstV1I GCAGC 4 cut(s) 226, 237, 341, 1105
BstV2I GAAGAC 1 cut(s) 501
BstZ17I GTATAC 1 cut(s) 99
Bsu15I ATCGAT 1 cut(s) 1225
Bsu36I CCTNAGG 1 cut(s) 1066
BsuI GTATCC 2 cut(s) 564, 740
BsuRI GGCC 4 cut(s) 184, 279, 363, 905
BsuTUI ATCGAT 1 cut(s) 1225
BtsCI GGATG 6 cut(s) 491, 615, 859, 1076, 1188, 1222
BtsI GCAGTG 2 cut(s) 56, 198
BtsIMutI CAGTG 2 cut(s) 56, 198
Cac8I GCNNGC 2 cut(s) 784, 885
CaiI CAGNNNCTG 1 cut(s) 677
CciI TCATGA 1 cut(s) 772
Cfr13I GGNCC 4 cut(s) 183, 277, 278, 1233
ClaI ATCGAT 1 cut(s) 1225
CsiI ACCWGGT 1 cut(s) 849
Csp6I GTAC 5 cut(s) 20, 107, 466, 847, 1240
CviAII CATG 5 cut(s) 49, 110, 155, 773, 844
CviQI GTAC 5 cut(s) 20, 107, 466, 847, 1240
DdeI CTNAG 2 cut(s) 879, 1066
DpnI GATC 2 cut(s) 777, 1224
DpnII GATC 2 cut(s) 775, 1222
EaeI YGGCCR 1 cut(s) 903
Eco24I GRGCYC 1 cut(s) 281
Eco32I GATATC 1 cut(s) 580
Eco47I GGWCC 1 cut(s) 1233
Eco81I CCTNAGG 1 cut(s) 1066
Eco91I GGTNACC 1 cut(s) 476
EcoO109I RGGNCCY 1 cut(s) 277
EcoO65I GGTNACC 1 cut(s) 476
EcoRII CCWGG 6 cut(s) 203, 259, 480, 838, 849, 1291
EcoRV GATATC 1 cut(s) 580
EcoT38I GRGCYC 1 cut(s) 281
Esp3I CGTCTC 1 cut(s) 2
FaeI CATG 5 cut(s) 52, 113, 158, 776, 847
FaqI GGGAC 1 cut(s) 682
FatI CATG 5 cut(s) 48, 109, 154, 772, 843
FauI CCCGC 1 cut(s) 775
FauNDI CATATG 1 cut(s) 40
FblI GTMKAC 2 cut(s) 98, 309
Fnu4HI GCNGC 4 cut(s) 240, 251, 330, 1119
FokI GGATG 6 cut(s) 478, 622, 846, 1083, 1175, 1229
FriOI GRGCYC 1 cut(s) 281
Fsp4HI GCNGC 4 cut(s) 240, 251, 330, 1119
FspBI CTAG 1 cut(s) 884
GluI GCNGC 4 cut(s) 240, 251, 330, 1119
GsaI CCCAGC 1 cut(s) 802
GsuI CTGGAG 1 cut(s) 230
HaeIII GGCC 4 cut(s) 184, 279, 363, 905
HapII CCGG 1 cut(s) 906
Hin1II CATG 5 cut(s) 52, 113, 158, 776, 847
HincII GTYRAC 1 cut(s) 856
HindII GTYRAC 1 cut(s) 856
HindIII AAGCTT 1 cut(s) 442
HinfI GANTC 4 cut(s) 298, 500, 680, 910
HpaII CCGG 1 cut(s) 906
HphI GGTGA 3 cut(s) 18, 46, 470
Hpy166II GTNNAC 3 cut(s) 99, 310, 856
Hpy188I TCNGA 2 cut(s) 440, 1269
Hpy188III TCNNGA 3 cut(s) 773, 1068, 1129
Hpy8I GTNNAC 3 cut(s) 99, 310, 856
HpyAV CCTTC 3 cut(s) 1064, 1202, 1264
HpyCH4III ACNGT 3 cut(s) 19, 673, 1135
HpyCH4IV ACGT 1 cut(s) 1173
HpyCH4V TGCA 7 cut(s) 113, 163, 242, 521, 600, 645, 918
HpyF10VI GCNNNNNNNGC 3 cut(s) 236, 629, 804
HpyF3I CTNAG 2 cut(s) 879, 1066
HpySE526I ACGT 1 cut(s) 1173
Hsp92II CATG 5 cut(s) 52, 113, 158, 776, 847
Kzo9I GATC 2 cut(s) 775, 1222
LmnI GCTCC 2 cut(s) 547, 1003
Lsp1109I GCAGC 4 cut(s) 226, 237, 341, 1105
LweI GCATC 2 cut(s) 160, 696
MabI ACCWGGT 1 cut(s) 849
MaeI CTAG 1 cut(s) 884
MaeII ACGT 1 cut(s) 1173
MaeIII GTNAC 5 cut(s) 34, 340, 476, 634, 718
MalI GATC 2 cut(s) 777, 1224
MbiI CCGCTC 1 cut(s) 782
MboI GATC 2 cut(s) 775, 1222
MboII GAAGA 1 cut(s) 501
MfeI CAATTG 1 cut(s) 393
MhlI GDGCHC 1 cut(s) 281
MluCI AATT 8 cut(s) 84, 210, 282, 393, 417, 525, 561, 956
MmeI TCCRAC 1 cut(s) 314
MnlI CCTC 6 cut(s) 84, 268, 368, 567, 733, 1075
MseI TTAA 3 cut(s) 146, 663, 1061
MslI CAYNNNNRTG 2 cut(s) 114, 156
MspA1I CMGCKG 2 cut(s) 250, 1118
MspI CCGG 1 cut(s) 906
MspR9I CCNGG 7 cut(s) 205, 261, 482, 840, 851, 907, 1293
MunI CAATTG 1 cut(s) 393
Mva1269I GAATGC 1 cut(s) 523
MvaI CCWGG 6 cut(s) 205, 261, 482, 840, 851, 1293
MwoI GCNNNNNNNGC 3 cut(s) 236, 629, 804
NciI CCSGG 1 cut(s) 907
NdeI CATATG 1 cut(s) 40
NdeII GATC 2 cut(s) 775, 1222
NheI GCTAGC 1 cut(s) 883
NlaIII CATG 5 cut(s) 52, 113, 158, 776, 847
NlaIV GGNNCC 3 cut(s) 279, 486, 819
NmeAIII GCCGAG 1 cut(s) 339
NmuCI GTSAC 4 cut(s) 34, 476, 634, 718
NspI RCATGY 2 cut(s) 113, 847
PagI TCATGA 1 cut(s) 772
PctI GAATGC 1 cut(s) 523
PfeI GAWTC 4 cut(s) 298, 500, 680, 910
PflMI CCANNNNNTGG 1 cut(s) 204
PkrI GCNGC 4 cut(s) 241, 252, 331, 1120
Ple19I CGATCG 1 cut(s) 1225
Ppu21I YACGTR 1 cut(s) 1174
Psp6I CCWGG 6 cut(s) 203, 259, 480, 838, 849, 1291
PspEI GGTNACC 1 cut(s) 476
PspFI CCCAGC 1 cut(s) 798
PspGI CCWGG 6 cut(s) 203, 259, 480, 838, 849, 1291
PspN4I GGNNCC 3 cut(s) 279, 486, 819
PspOMI GGGCCC 1 cut(s) 277
PspPI GGNCC 4 cut(s) 183, 277, 278, 1233
PstI CTGCAG 1 cut(s) 602
PstNI CAGNNNCTG 1 cut(s) 677
PvuI CGATCG 1 cut(s) 1225
PvuII CAGCTG 2 cut(s) 250, 1118
RsaI GTAC 5 cut(s) 21, 108, 467, 848, 1241
RsaNI GTAC 5 cut(s) 20, 107, 466, 847, 1240
RseI CAYNNNNRTG 2 cut(s) 114, 156
SaqAI TTAA 3 cut(s) 146, 663, 1061
SatI GCNGC 4 cut(s) 240, 251, 330, 1119
Sau3AI GATC 2 cut(s) 775, 1222
Sau96I GGNCC 4 cut(s) 183, 277, 278, 1233
ScrFI CCNGG 7 cut(s) 205, 261, 482, 840, 851, 907, 1293
SduI GDGCHC 1 cut(s) 281
SexAI ACCWGGT 1 cut(s) 849
SfaNI GCATC 2 cut(s) 160, 696
SfcI CTRYAG 2 cut(s) 598, 1279
SinI GGWCC 1 cut(s) 1233
SmiMI CAYNNNNRTG 2 cut(s) 114, 156
Sse9I AATT 8 cut(s) 84, 210, 282, 393, 417, 525, 561, 956
SsiI CCGC 1 cut(s) 782
SspI AATATT 1 cut(s) 1250
SspMI CTAG 1 cut(s) 884
StyD4I CCNGG 7 cut(s) 203, 259, 480, 838, 849, 905, 1291
TaaI ACNGT 3 cut(s) 19, 673, 1135
TaiI ACGT 1 cut(s) 1176
TaqI TCGA 4 cut(s) 301, 559, 778, 1225
TaqII GACCGA 2 cut(s) 1218, 1221
TasI AATT 8 cut(s) 84, 210, 282, 393, 417, 525, 561, 956
TatI WGTACW 1 cut(s) 465
TfiI GAWTC 4 cut(s) 298, 500, 680, 910
Tru1I TTAA 3 cut(s) 146, 663, 1061
Tru9I TTAA 3 cut(s) 146, 663, 1061
TscAI CASTG 2 cut(s) 63, 205
TseFI GTSAC 4 cut(s) 34, 476, 634, 718
TseI GCWGC 4 cut(s) 239, 250, 329, 1118
Tsp45I GTSAC 4 cut(s) 34, 476, 634, 718
TspDTI ATGAA 4 cut(s) 160, 436, 672, 1008
TspRI CASTG 2 cut(s) 63, 205
Van91I CCANNNNNTGG 1 cut(s) 204
VpaK11BI GGWCC 1 cut(s) 1233
XapI RAATTY 2 cut(s) 417, 956
XceI RCATGY 2 cut(s) 113, 847
XmiI GTMKAC 2 cut(s) 98, 309
XspI CTAG 1 cut(s) 884
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.