Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr09

Orthogroup ID

OG0005044

Physical Location & Seq

Genomic Coordinates Reverse (-)

15602782 .. 15610486

Gene Structure 7705 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD09G1181500.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2970 bp

ATGGATGATCTCGAAAAAGCAATACTTATATTGTTTGATGAGTCGGGCACCGTTGATTCTGAGCTGAAACAGAAGGCAAAAGATTACTGTGATAAAATCAAGGAGGAAAAAGCGATATGTAGTGTTTGTATTGAGAGGTTGTGTCTTTCGAGTTTAGTTCAAGTTCAGTTTTGGTGTTTGCAGACTCTACAAGAGGTTATTAGGGTCCGGTACTCGTCGATGAGTCTAGATGAGAGGTTTTTGATCAGAAAATCGGTGTTTTGGATTGCATGTCTAGGTGGGTTTGATGATAAGAGTGCTGTTAGGGTTTTAGAAGGTCCTGCATTTATAAAGAATAAACATGCGCAGGTTTTAGTGACTCTGATTTACTATGAGTACCCATTGATTTGGTCGTCAGTGTTTGTTGATTTTTTGTCACAACTGAATAAAGGCGCAGTGGTGATTGATATGTTTTGCCGGGTTTTGAATGCTCTGGATGAGGAAGTGATTAATTTGGATCACCCTCGGACACCTGAGGAACTATCAGTGGCAGCGCGGATTAAGGATGCTATGAGGCAGCAGTGTGTAGCACAAATAGTTAGAGCCTGGTACGACATTGTGTCTATGTATAGGAACTCTGATGAAGAGCTTTGTGCTAGTGTATTAGAATCAATGAGGAGGTTTATCTCTTGGATTGATATTAGATTAATTGTGAATGATGCCTTTATCCCGTTATTGTTTGAGTTGGTTTTGGTTGATGGGGTCTCCGAACAACTTCGTAGTGCAGCAGCTGGATGTTTGTCAGCAGCAGTATCAAAAAGGATGGATCCACAGGCAAAACTACAGCTGTTGCAAAGTCTTCAAATGCGTCAGGTTTTTGGACTAATAGCTCAGGATAGTGACTCAGAGTTGGTTTCTAACGTAGCTGCATTGCTTACTGGGTATGCAGTTGAGGTTCTTGAGTGCTTTAAACGGTTGAATTCTGAGGATGCTAAGGGTATTTCAATGGAGCTTTTGAATGAAGTTTTGCCCTCTGTATTTTATGTGATGCAGAACTGTGAGTTGGACTCGACATTTAGCATTGTGCAATTTCTTTCAGGTTATGTTGGCACAATGAAGAATCTTTCCCCACTGAGGGAAACACAGCTGGGTCATGTGGGTCAGATTTTGGAAGTGATCCGTTCGCAGATCCGCTATGATCCTATGTACCGTGAAAATCTAGATATATTGGATAAAATTGGAAAAGATGAGGAAGATAGGATGGTGGAGTTTAGAAAGGATTTGTTTGTGCTGCTGCGTAATGTAGGTCGTGTAGCACCTGATGTCACTCAGATATTTATTAGAAACTCGTTGGCTAGTGCCGTTGGATCATCATCAGACTGGAATGTTGAAGAGGTGGAAGCTGCACTTTCACTTTTCTATGCATATGGTGAGTCAATAAATGGCGAGGCAATTCGAACTGGGAGTGGTCTATTGGGTGAATTGGTACCAATGCTTTTATCTACAAGGTTCCTTTGCCATTCAAATAGGCTAGTTGCACTTGTGTATCTAGAAACGGTAACAAGATACATGAAGTTTGTTCAGGAGAATACTCAATATATTCACATGGTTTTGGCTGCCTTTCTTGATGAAAGGGGTATACACCATCCAAATGCCAATGTGAGTAGAAGGGCGAGTTATCTGTTTATGAGGATTGTGAAATTGTTGAGAGTGAAGCTTGTTCCTTTCATAGAAAATATTTTGCAGAGTTTGCATGATACAGTTGCTGGGTTTACAAGAATTGATTATACATCAAAAGAGCTTTCGGGGTCTGAAGATGGTAGTCACATTTTTGAGGCAATTGGTTTATTGATTGGCATGGAAGATGTACCACCAGCAAAGCAATCTGATTATCTCTCTTCACTTCTCACTCCTCTTTGTCAACAGGTTGAAGTATTGCTCATGAATGCCAAAGTATTGACTCCAGAAGAGGCACCAAAAAAATTTGCTAATATTCAGCAGATAATCGTGGCGATTAATTCTCTCAGCAAGGGATTCAGCGAGCGTCTTGTGACTGCTAGTCGACCTGCAATTGGTCTCATGTTCAAGCAGACATTAGATGTTCTCCTTCAAGTACTGGTTGTGTTTCCTAACGTAGAGACTTTGCGCAGTAAGGTAACATCATTTGTACACCGCATGGTGGACACTCTAGGAGCATCTGTGTTTCCTTACCTCCCAAAGGCCTTGGAGCAGTTGCTTGTGGATAGTGAGCCAAAGGAATTGGTTGGTTTGCTTCTGTTGCTTAATCAACTGATATGCAAGTTCAACACATTATTCCGTGACATACTGGATGAAGTATTTCCTGCTATTACTGGTAGGATATTAAATATTATTCCAGTAGACACACTCCCCTCAGGACCTGGATCTAATACTGAGGAAAATCGGGAATTGCAAGAACTTCAGCGAACATTGTATACATTTCTTCATGTGATAACCACACATGATCTATCTTCTGTATTCCTATCCCCCAAAAGTAGGAGCTACTTACAGCCAATTATGCAGTTGCTTTTGTTAACGTCTTGTAAGCACAAGGATTTTCTTGTAAGAAAGTCGTGCGTTCAGATATTTATTAGGCTGATTAAGGATTGGTGTGCGATGCCTAATGGTGAAGAAAAAGTACCTGGTTTCCAGAGTTTTATAATAGAGACCTTTTCTACAAACTGTTGTTTGTACAGCCTGCTGGACACCTCTTTCGAATTTCGTGATGCAAATACTCTCGTTTTGTTTGGAGAAATTGTACTTGCTCAGAAGGTTATGTATGAAAAGTTTGGCAATGATTTTCTAGCTCATTTCGTCTCAAAGGGTTTCCCAGCAGCACATTGCCCCCAAGATTTGGCTGAGAAATATTGCCAGCAGCTGCAGGGTAGTGATATAAAGGCATTGAAGTCATTCTACCAGTCACTTATTGAAAGTTTGAGACATCAGCAGAATGGGAGCCTTGTTGTCAGATAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0000049 GO:0003006 GO:0003674 GO:0003676 GO:0003723 GO:0005049 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005635 GO:0005643 GO:0005737 GO:0005829 GO:0006403 GO:0006405 GO:0006409 GO:0006611 GO:0006810 GO:0006886 GO:0006913 GO:0007275 GO:0008104 GO:0008150 GO:0008536 GO:0009653 GO:0009791 GO:0009888 GO:0009908 GO:0009933 GO:0010014 GO:0012505 GO:0015031 GO:0015833 GO:0015931 GO:0016363 GO:0017016 GO:0019899 GO:0022414 GO:0031267 GO:0031503 GO:0031967 GO:0031974 GO:0031975 GO:0031981 GO:0032501 GO:0032502 GO:0032991 GO:0033036 GO:0034399 GO:0034613 GO:0042886 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0044422 GO:0044424 GO:0044428 GO:0044444 GO:0044446 GO:0044464 GO:0045184 GO:0046907 GO:0048367 GO:0048507 GO:0048532 GO:0048608 GO:0048731 GO:0048856 GO:0050657 GO:0050658 GO:0051020 GO:0051031 GO:0051168 GO:0051169 GO:0051179 GO:0051234 GO:0051236 GO:0051641 GO:0051649 GO:0061458 GO:0070013 GO:0070727 GO:0071166 GO:0071426 GO:0071431 GO:0071528 GO:0071702 GO:0071705 GO:0090567 GO:0097064 GO:0097159 GO:0140104 GO:0140142 GO:1901363

KEGG Pathways

Metabolic & Signaling

ko03013 map03013

Pfam Domains

Protein Families

Xpo1

Protein Analysis

990

Amino Acids

111.85

Weight (kDa)

5.47

Isoelectric Point (pI)

43.42

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Xpo1	PF08389	107 - 260	2.5e-36	Exportin 1-like protein
Exportin-T	PF19282	326 - 977	3.4e-89	Exportin-T

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

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Orthologous Genes (Group: OG0005044)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G72560 AT1G72560 AT1G72560 AT1G72560 AT1G72560 AT1G72560 AT1G72560
fragaria_vesca	FvH4_6g34890 FvH4_6g34890 FvH4_6g34890 FvH4_6g34890 FvH4_6g34890 FvH4_6g34890 FvH4_6g34890
malus_domestica	MD09G1181500.v1.1 MD17G1167700.v1.1
prunus_persica	Prupe.3G039600_v2.0.a1 Prupe.3G039600_v2.0.a1 Prupe.3G039600_v2.0.a1
pyrus_communis	pycom09g09910 pycom17g15940
rosa_chinensis	RchiOBHm_Chr2g0145781
rosa_laevigata	RLG00000020167
rosa_multiflora	Rmu_sc0000473.1_g000003
rosa_roxburghii	Rroxscaffold_152G00434750 Rroxscaffold_2G00100450
rosa_rugosa	Rorug02G0393200
rosa_samantha	Rh2BG459800 Rh2CG434400
rosa_wichuraiana	Rw2G036570

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	2 cut(s)	329, 2657
Acc16I	TGCGCA	2 cut(s)	345, 2126
Acc36I	ACCTGC	2 cut(s)	337, 2053
Acc65I	GGTACC	1 cut(s)	1465
AccB1I	GGYRCC	3 cut(s)	47, 1465, 1951
AccB7I	CCANNNNNTGG	1 cut(s)	2851
AccI	GTMKAC	4 cut(s)	1618, 2041, 2358, 2432
AccII	CGCG	1 cut(s)	535
AciI	CCGC	3 cut(s)	535, 1171, 2152
AclWI	GGATC	8 cut(s)	504, 800, 813, 1150, 1162, 1172, 1354, 2389
AcsI	RAATTY	3 cut(s)	958, 1961, 2714
AcuI	CTGAAG	2 cut(s)	1812, 2402
AfiI	CCNNNNNNNGG	7 cut(s)	1113, 1114, 2051, 2158, 2197, 2493, 2851
AhdI	GACNNNNNGTC	2 cut(s)	598, 2037
AjnI	CCWGG	3 cut(s)	584, 2377, 2638
AjuI	GAANNNNNNNTTGG	2 cut(s)	1025, 1057
Alw26I	GTCTC	6 cut(s)	748, 2060, 2111, 2657, 2818, 2929
AlwI	GGATC	8 cut(s)	504, 800, 813, 1150, 1162, 1172, 1354, 2389
AlwNI	CAGNNNCTG	4 cut(s)	770, 1745, 2378, 2875
AoxI	GGCC	1 cut(s)	2199
ApoI	RAATTY	3 cut(s)	958, 1961, 2714
ArsI	GACNNNNNNTTYG	2 cut(s)	2693, 2725
AseI	ATTAAT	3 cut(s)	489, 686, 1995
Asp700I	GAANNNNTTC	3 cut(s)	753, 2316, 2906
Asp718I	GGTACC	1 cut(s)	1465
AspLEI	GCGC	4 cut(s)	346, 434, 535, 2127
AspS9I	GGNCC	3 cut(s)	205, 317, 2375
AsuC2I	CCSGG	1 cut(s)	458
AsuHPI	GGTGA	5 cut(s)	451, 491, 1421, 1469, 2636
AsuII	TTCGAA	2 cut(s)	1435, 2712
AvaII	GGWCC	3 cut(s)	205, 317, 2375
AxyI	CCTNAGG	2 cut(s)	513, 2371
BaeGI	GKGCMC	1 cut(s)	50
BaeI	ACNNNNGTAYC	2 cut(s)	1508, 1541
BamHI	GGATCC	1 cut(s)	805
BanI	GGYRCC	3 cut(s)	47, 1465, 1951
BarI	GAAGNNNNNNTAC	4 cut(s)	2619, 2651, 2894, 2926
BbsI	GAAGAC	1 cut(s)	830
BccI	CCATC	5 cut(s)	731, 796, 1234, 1632, 1790
BceAI	ACGGC	1 cut(s)	1325
BciT130I	CCWGG	3 cut(s)	586, 2379, 2640
BclI	TGATCA	1 cut(s)	243
BcnI	CCSGG	1 cut(s)	458
BcoDI	GTCTC	6 cut(s)	748, 2060, 2111, 2657, 2818, 2929
BfmI	CTRYAG	2 cut(s)	821, 2876
BfuAI	ACCTGC	2 cut(s)	337, 2053
BmcAI	AGTACT	1 cut(s)	2094
Bme1390I	CCNGG	4 cut(s)	458, 586, 2379, 2640
Bme18I	GGWCC	3 cut(s)	205, 317, 2375
BmeRI	GACNNNNNGTC	2 cut(s)	598, 2037
BmgT120I	GGNCC	3 cut(s)	205, 317, 2375
BmiI	GGNNCC	7 cut(s)	49, 206, 807, 1467, 1490, 1953, 2954
BmrFI	CCNGG	4 cut(s)	458, 586, 2379, 2640
BmrI	ACTGGG	2 cut(s)	927, 1449
BmsI	GCATC	7 cut(s)	535, 688, 958, 1017, 2183, 2604, 2713
BmuI	ACTGGG	2 cut(s)	927, 1449
BpiI	GAAGAC	1 cut(s)	830
BplI	GAGNNNNNCTC	2 cut(s)	1031, 1063
BpmI	CTGGAG	1 cut(s)	1926
Bpu10I	CCTNAGC	2 cut(s)	870, 972
Bpu14I	TTCGAA	2 cut(s)	1435, 2712
BpuEI	CTTGAG	1 cut(s)	959
BpuMI	CCSGG	1 cut(s)	458
BsaBI	GATNNNNATC	1 cut(s)	1351
BsaI	GGTCTC	3 cut(s)	748, 2060, 2657
BsaJI	CCNNGG	2 cut(s)	503, 2202
BsaWI	WCCGGW	1 cut(s)	207
BsaXI	ACNNNNNCTCC	4 cut(s)	2163, 2193, 2739, 2769
Bsc4I	CCNNNNNNNGG	7 cut(s)	1113, 1114, 2051, 2158, 2197, 2493, 2851
Bse1I	ACTGG	8 cut(s)	922, 1364, 1444, 2100, 2310, 2335, 2354, 2914
Bse21I	CCTNAGG	2 cut(s)	513, 2371
Bse3DI	GCAATG	3 cut(s)	908, 2797, 2836
Bse8I	GATNNNNATC	1 cut(s)	1351
BseBI	CCWGG	3 cut(s)	586, 2379, 2640
BseDI	CCNNGG	2 cut(s)	503, 2202
BseGI	GGATG	9 cut(s)	10, 481, 550, 779, 807, 973, 1245, 1624, 2314
BseJI	GATNNNNATC	1 cut(s)	1351
BseLI	CCNNNNNNNGG	7 cut(s)	1113, 1114, 2051, 2158, 2197, 2493, 2851
BseMI	GCAATG	3 cut(s)	908, 2797, 2836
BseNI	ACTGG	8 cut(s)	922, 1364, 1444, 2100, 2310, 2335, 2354, 2914
BseRI	GAGGAG	2 cut(s)	670, 1881
BseSI	GKGCMC	1 cut(s)	50
BseYI	CCCAGC	3 cut(s)	1126, 1745, 2827
BsgI	GTGCAG	2 cut(s)	783, 1368
Bsh1236I	CGCG	1 cut(s)	535
BshFI	GGCC	1 cut(s)	2201
BshNI	GGYRCC	3 cut(s)	47, 1465, 1951
BsiSI	CCGG	2 cut(s)	208, 457
BslI	CCNNNNNNNGG	7 cut(s)	1113, 1114, 2051, 2158, 2197, 2493, 2851
BsmAI	GTCTC	6 cut(s)	748, 2060, 2111, 2657, 2818, 2929
BsmBI	CGTCTC	1 cut(s)	2818
BsmI	GAATGC	2 cut(s)	472, 1930
BsnI	GGCC	1 cut(s)	2201
Bso31I	GGTCTC	3 cut(s)	748, 2060, 2657
Bsp119I	TTCGAA	2 cut(s)	1435, 2712
Bsp1286I	GDGCHC	1 cut(s)	50
Bsp1407I	TGTACA	2 cut(s)	2146, 2688
BspACI	CCGC	3 cut(s)	535, 1171, 2152
BspANI	GGCC	1 cut(s)	2201
BspFNI	CGCG	1 cut(s)	535
BspHI	TCATGA	1 cut(s)	1920
BspLI	GGNNCC	7 cut(s)	49, 206, 807, 1467, 1490, 1953, 2954
BspMAI	CTGCAG	1 cut(s)	2880
BspMI	ACCTGC	2 cut(s)	337, 2053
BspPI	GGATC	8 cut(s)	504, 800, 813, 1150, 1162, 1172, 1354, 2389
BspQI	GCTCTTC	1 cut(s)	618
BspT104I	TTCGAA	2 cut(s)	1435, 2712
BspT107I	GGYRCC	3 cut(s)	47, 1465, 1951
BspTNI	GGTCTC	3 cut(s)	748, 2060, 2657
BsrDI	GCAATG	3 cut(s)	908, 2797, 2836
BsrGI	TGTACA	2 cut(s)	2146, 2688
BsrI	ACTGG	8 cut(s)	922, 1364, 1444, 2100, 2310, 2335, 2354, 2914
BssECI	CCNNGG	2 cut(s)	503, 2202
BssNAI	GTATAC	2 cut(s)	1619, 2433
BssT1I	CCWWGG	1 cut(s)	2202
Bst1107I	GTATAC	2 cut(s)	1619, 2433
Bst2UI	CCWGG	3 cut(s)	586, 2379, 2640
Bst4CI	ACNGT	8 cut(s)	52, 89, 954, 1037, 1190, 1537, 1741, 2681
Bst6I	CTCTTC	4 cut(s)	618, 1365, 1882, 1941
BstAPI	GCANNNNNTGC	1 cut(s)	1729
BstAUI	TGTACA	2 cut(s)	2146, 2688
BstBI	TTCGAA	2 cut(s)	1435, 2712
BstC8I	GCNNGC	3 cut(s)	2021, 2696, 2870
BstENI	CCTNNNNNAGG	1 cut(s)	2195
BstF5I	GGATG	9 cut(s)	10, 481, 550, 779, 807, 973, 1245, 1624, 2314
BstFNI	CGCG	1 cut(s)	535
BstHHI	GCGC	4 cut(s)	346, 434, 535, 2127
BstMAI	GTCTC	6 cut(s)	748, 2060, 2111, 2657, 2818, 2929
BstMWI	GCNNNNNNNGC	3 cut(s)	1729, 2257, 2515
BstNI	CCWGG	3 cut(s)	586, 2379, 2640
BstNSI	RCATGY	2 cut(s)	273, 344
BstSCI	CCNGG	4 cut(s)	456, 584, 2377, 2638
BstSFI	CTRYAG	2 cut(s)	821, 2876
BstSLI	GKGCMC	1 cut(s)	50
BstUI	CGCG	1 cut(s)	535
BstV2I	GAAGAC	1 cut(s)	830
BstX2I	RGATCY	3 cut(s)	805, 1167, 2381
BstXI	CCANNNNNNTGG	1 cut(s)	387
BstYI	RGATCY	3 cut(s)	805, 1167, 2381
BstZ17I	GTATAC	2 cut(s)	1619, 2433
Bsu36I	CCTNAGG	2 cut(s)	513, 2371
BsuRI	GGCC	1 cut(s)	2201
BtgZI	GCGATG	1 cut(s)	2627
BtsCI	GGATG	9 cut(s)	10, 481, 550, 779, 807, 973, 1245, 1624, 2314
BtsI	GCAGTG	2 cut(s)	441, 566
BtsIMutI	CAGTG	5 cut(s)	402, 441, 531, 566, 1109
BveI	ACCTGC	2 cut(s)	337, 2053
Cac8I	GCNNGC	3 cut(s)	2021, 2696, 2870
CaiI	CAGNNNCTG	4 cut(s)	770, 1745, 2378, 2875
CciI	TCATGA	1 cut(s)	1920
CfoI	GCGC	4 cut(s)	346, 434, 535, 2127
Cfr13I	GGNCC	3 cut(s)	205, 317, 2375
CseI	GACGC	2 cut(s)	836, 2012
CsiI	ACCWGGT	1 cut(s)	2638
DraI	TTTAAA	1 cut(s)	949
DriI	GACNNNNNGTC	2 cut(s)	598, 2037
Eam1104I	CTCTTC	4 cut(s)	618, 1365, 1882, 1941
Eam1105I	GACNNNNNGTC	2 cut(s)	598, 2037
EarI	CTCTTC	4 cut(s)	618, 1365, 1882, 1941
Eco130I	CCWWGG	1 cut(s)	2202
Eco147I	AGGCCT	1 cut(s)	2201
Eco31I	GGTCTC	3 cut(s)	748, 2060, 2657
Eco47I	GGWCC	3 cut(s)	205, 317, 2375
Eco57I	CTGAAG	2 cut(s)	1812, 2402
Eco81I	CCTNAGG	2 cut(s)	513, 2371
EcoNI	CCTNNNNNAGG	1 cut(s)	2195
EcoO109I	RGGNCCY	2 cut(s)	317, 2375
EcoRI	GAATTC	1 cut(s)	958
EcoRII	CCWGG	3 cut(s)	584, 2377, 2638
EcoT14I	CCWWGG	1 cut(s)	2202
EcoT22I	ATGCAT	1 cut(s)	1405
ErhI	CCWWGG	1 cut(s)	2202
Esp3I	CGTCTC	1 cut(s)	2818
FalI	AAGNNNNNCTT	4 cut(s)	9, 41, 1371, 1403
FauNDI	CATATG	1 cut(s)	1405
FbaI	TGATCA	1 cut(s)	243
FblI	GTMKAC	4 cut(s)	1618, 2041, 2358, 2432
FokI	GGATG	9 cut(s)	17, 488, 557, 786, 814, 980, 1252, 1611, 2321
FspI	TGCGCA	2 cut(s)	345, 2126
GlaI	GCGC	4 cut(s)	345, 433, 534, 2126
GsaI	CCCAGC	3 cut(s)	1130, 1749, 2831
GsuI	CTGGAG	1 cut(s)	1926
HaeIII	GGCC	1 cut(s)	2201
HapII	CCGG	2 cut(s)	208, 457
HgaI	GACGC	2 cut(s)	836, 2012
HhaI	GCGC	4 cut(s)	346, 434, 535, 2127
Hin6I	GCGC	4 cut(s)	344, 432, 533, 2125
HinP1I	GCGC	4 cut(s)	344, 432, 533, 2125
HincII	GTYRAC	3 cut(s)	1901, 2042, 2532
HindII	GTYRAC	3 cut(s)	1901, 2042, 2532
HindIII	AAGCTT	1 cut(s)	1694
HpaI	GTTAAC	1 cut(s)	2532
HpaII	CCGG	2 cut(s)	208, 457
HphI	GGTGA	5 cut(s)	451, 491, 1421, 1469, 2636
Hpy166II	GTNNAC	9 cut(s)	1619, 1752, 1901, 2042, 2149, 2161, 2359, 2433, 2532
Hpy8I	GTNNAC	9 cut(s)	1619, 1752, 1901, 2042, 2149, 2161, 2359, 2433, 2532
Hpy99I	CGWCG	1 cut(s)	220
HpyAV	CCTTC	5 cut(s)	67, 308, 1641, 2096, 2761
HpyCH4III	ACNGT	8 cut(s)	52, 89, 954, 1037, 1190, 1537, 1741, 2681
HpyCH4IV	ACGT	3 cut(s)	900, 2112, 2534
HpyF10VI	GCNNNNNNNGC	3 cut(s)	1729, 2257, 2515
HpySE526I	ACGT	3 cut(s)	900, 2112, 2534
HspAI	GCGC	4 cut(s)	344, 432, 533, 2125
KpnI	GGTACC	1 cut(s)	1469
Ksp22I	TGATCA	1 cut(s)	243
KspAI	GTTAAC	1 cut(s)	2532
LguI	GCTCTTC	1 cut(s)	618
LmnI	GCTCC	5 cut(s)	988, 2171, 2206, 2496, 2952
LweI	GCATC	7 cut(s)	535, 688, 958, 1017, 2183, 2604, 2713
MabI	ACCWGGT	1 cut(s)	2638
MaeII	ACGT	3 cut(s)	900, 2112, 2534
MfeI	CAATTG	2 cut(s)	1818, 2049
MflI	RGATCY	3 cut(s)	805, 1167, 2381
MhlI	GDGCHC	1 cut(s)	50
MlyI	GAGTC	8 cut(s)	50, 178, 232, 352, 875, 1040, 1421, 1933
MmeI	TCCRAC	2 cut(s)	1023, 1324
Mph1103I	ATGCAT	1 cut(s)	1405
MroXI	GAANNNNTTC	3 cut(s)	753, 2316, 2906
MseI	TTAA	9 cut(s)	489, 540, 686, 948, 1995, 2262, 2342, 2531, 2598
MslI	CAYNNNNRTG	1 cut(s)	1629
MspA1I	CMGCKG	4 cut(s)	770, 826, 1126, 2875
MspI	CCGG	2 cut(s)	208, 457
MspR9I	CCNGG	4 cut(s)	458, 586, 2379, 2640
MunI	CAATTG	2 cut(s)	1818, 2049
Mva1269I	GAATGC	2 cut(s)	472, 1930
MvaI	CCWGG	3 cut(s)	586, 2379, 2640
MvnI	CGCG	1 cut(s)	535
MwoI	GCNNNNNNNGC	3 cut(s)	1729, 2257, 2515
NciI	CCSGG	1 cut(s)	458
NdeI	CATATG	1 cut(s)	1405
NlaIV	GGNNCC	7 cut(s)	49, 206, 807, 1467, 1490, 1953, 2954
NmuCI	GTSAC	8 cut(s)	355, 414, 878, 1303, 1802, 2029, 2297, 2916
NsbI	TGCGCA	2 cut(s)	345, 2126
NsiI	ATGCAT	1 cut(s)	1405
NspI	RCATGY	2 cut(s)	273, 344
NspV	TTCGAA	2 cut(s)	1435, 2712
PagI	TCATGA	1 cut(s)	1920
PceI	AGGCCT	1 cut(s)	2201
PciSI	GCTCTTC	1 cut(s)	618
PctI	GAATGC	2 cut(s)	472, 1930
PdmI	GAANNNNTTC	3 cut(s)	753, 2316, 2906
PfeI	GAWTC	4 cut(s)	56, 647, 1099, 2013
PflMI	CCANNNNNTGG	1 cut(s)	2851
PleI	GAGTC	8 cut(s)	49, 178, 231, 352, 875, 1040, 1420, 1933
PpsI	GAGTC	8 cut(s)	49, 178, 231, 352, 875, 1040, 1420, 1933
PpuMI	RGGWCCY	2 cut(s)	317, 2375
PshBI	ATTAAT	3 cut(s)	489, 686, 1995
PsiI	TTATAA	2 cut(s)	329, 2657
Psp5II	RGGWCCY	2 cut(s)	317, 2375
Psp6I	CCWGG	3 cut(s)	584, 2377, 2638
PspFI	CCCAGC	3 cut(s)	1126, 1745, 2827
PspGI	CCWGG	3 cut(s)	584, 2377, 2638
PspN4I	GGNNCC	7 cut(s)	49, 206, 807, 1467, 1490, 1953, 2954
PspPI	GGNCC	3 cut(s)	205, 317, 2375
PspPPI	RGGWCCY	2 cut(s)	317, 2375
PsrI	GAACNNNNNNTAC	2 cut(s)	2416, 2448
PstI	CTGCAG	1 cut(s)	2880
PstNI	CAGNNNCTG	4 cut(s)	770, 1745, 2378, 2875
PsuI	RGATCY	3 cut(s)	805, 1167, 2381
PvuII	CAGCTG	4 cut(s)	770, 826, 1126, 2875
RseI	CAYNNNNRTG	1 cut(s)	1629
SalI	GTCGAC	1 cut(s)	2040
SapI	GCTCTTC	1 cut(s)	618
SaqAI	TTAA	9 cut(s)	489, 540, 686, 948, 1995, 2262, 2342, 2531, 2598
Sau96I	GGNCC	3 cut(s)	205, 317, 2375
ScaI	AGTACT	1 cut(s)	2094
SchI	GAGTC	8 cut(s)	50, 178, 232, 352, 875, 1040, 1421, 1933
ScrFI	CCNGG	4 cut(s)	458, 586, 2379, 2640
SduI	GDGCHC	1 cut(s)	50
SexAI	ACCWGGT	1 cut(s)	2638
SfaNI	GCATC	7 cut(s)	535, 688, 958, 1017, 2183, 2604, 2713
SfcI	CTRYAG	2 cut(s)	821, 2876
SfuI	TTCGAA	2 cut(s)	1435, 2712
SinI	GGWCC	3 cut(s)	205, 317, 2375
SmiMI	CAYNNNNRTG	1 cut(s)	1629
SmlI	CTYRAG	1 cut(s)	938
SmoI	CTYRAG	1 cut(s)	938
SseBI	AGGCCT	1 cut(s)	2201
SsiI	CCGC	3 cut(s)	535, 1171, 2152
SspI	AATATT	4 cut(s)	1717, 1972, 2347, 2864
StuI	AGGCCT	1 cut(s)	2201
StyD4I	CCNGG	4 cut(s)	456, 584, 2377, 2638
StyI	CCWWGG	1 cut(s)	2202
TaaI	ACNGT	8 cut(s)	52, 89, 954, 1037, 1190, 1537, 1741, 2681
TaiI	ACGT	3 cut(s)	903, 2115, 2537
TaqI	TCGA	7 cut(s)	12, 149, 218, 1049, 1435, 2041, 2712
TatI	WGTACW	4 cut(s)	2092, 2146, 2688, 2755
TfiI	GAWTC	4 cut(s)	56, 647, 1099, 2013
Tru1I	TTAA	9 cut(s)	489, 540, 686, 948, 1995, 2262, 2342, 2531, 2598
Tru9I	TTAA	9 cut(s)	489, 540, 686, 948, 1995, 2262, 2342, 2531, 2598
TscAI	CASTG	5 cut(s)	402, 441, 531, 566, 1116
TseFI	GTSAC	8 cut(s)	355, 414, 878, 1303, 1802, 2029, 2297, 2916
Tsp45I	GTSAC	8 cut(s)	355, 414, 878, 1303, 1802, 2029, 2297, 2916
TspGWI	ACGGA	2 cut(s)	1148, 2285
TspRI	CASTG	5 cut(s)	402, 441, 531, 566, 1116
Van91I	CCANNNNNTGG	1 cut(s)	2851
VpaK11BI	GGWCC	3 cut(s)	205, 317, 2375
VspI	ATTAAT	3 cut(s)	489, 686, 1995
XagI	CCTNNNNNAGG	1 cut(s)	2195
XapI	RAATTY	3 cut(s)	958, 1961, 2714
XbaI	TCTAGA	3 cut(s)	226, 1198, 1528
XceI	RCATGY	2 cut(s)	273, 344
XmiI	GTMKAC	4 cut(s)	1618, 2041, 2358, 2432
XmnI	GAANNNNTTC	3 cut(s)	753, 2316, 2906
ZrmI	AGTACT	1 cut(s)	2094
Zsp2I	ATGCAT	1 cut(s)	1405

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.