Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000152

Orthogroup ID

OG0005044

Physical Location & Seq

Genomic Coordinates Forward (+)

234368 .. 242472

Gene Structure 8105 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_152G00434750.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2970 bp

ATGGCTGATCTTGAGAAAGCTATACTCATAGTTTTTGATCAATCGGGCACCGTTCATTCCGAGCTGAAACAGAAGGCGACGGAATACTGTGATAAAATTAAGGATGAACAAGCGATTTGTAGCATCTGCATTGAAAGGATATGTTTTTCGAATTTATATCAAGTCCAGTTTTGGTGTTTGCAGACCCTGCACGAGGTTGTTAAGGTCCGGTACTCATCAATTAGTCCAGACGAGAGGTATTTGATCCGAAAGTCGGTGTTTTCAATTGCATGTTTTGGTGCTATTGATGATAACAATGTTGTTGTTAGGGTTTTAGAAGGTCCTGCATTTATAAAGAACAAACTTGCTCAGGTCCTGGTAACTTTGATTTATTTCGAGTACCCGTTAATTTGGTCATCTGTGTTTGTGGATTTCTTGTCACAATTGAGTAAAGGGGCATTGGTGATTGATATGTTTTGTCGGGTTTTGAATGCTTTGGACGATGAACTGATCAATGTGGATTACCCTCGGACACCTGAAGAACTATCAGTGGCAACCCGGGTTAAGGATGCAATGAGGCAGCAGTGTGTAGCTCAAATAGTTAGAGCTTGGTATGATATTGTGTCTATGTATAGGAACTCTGATGAAGAGCTGTGTGCTAGTGTATTAGATGCAATGAGGAGGTTTATTGCTTGGATTGATATTGGTTTAATTGTAAATGATGCGTTCATCCCGTTATTGTTTGATTTGGTGTTGGCTGATGGGCTGTCTGAACAACTCCGAGGTGCTGCAGCTGGGTGTTTGACAGCAGTGGTATCCAAAAGGATGGAGCCGCAATCAAAACTACCACTATTGCAGAGTCTTCAAATCCGTCGAGTGTTTGCGCTAGTAGCCAAGGATAGCGACTCAGAGTTGGTTTCCAAAGTAGCTGCATTGCTTACTGGATATGCGGTTGAGGCTCTTGAATGCTTTAAAAGCTTGAATTCCGAGGATGCAAAGGGTGTTTCAATGGAGCTCTTGAATGAAGTTCTGCCCTCCGTATTCTATGTGATGCAGAATTGTGAGTTGGAATCTACATTTAGTATTGTGCAATTTCTTTTAAGTTATGTTGCCACAATGAAGAATCTTTCTCCATTGAGGGAAACACAGCTGCTTCATGTGGGTCAGATTTTGGAAGTAATTCGTACAGAGATCCGCTATGATCCTATGTACCGTGATAATCTTGATACATTGGATAAGATTGGAAAGGAAGAAGAAGATAGAATGGTGGAGTTCAGAAAGGATTTGTTTGTGCTGTTGCGCAATATAGGTCGGGTAGCTCCAGATGTTTGTCAGATATTCATTAGAAACTCATTGGCTGCTTCTGTTGCGTCCTCGTCAGACTGGAATGTTGAAGAGGTGGAAGCTGCACTTTCTCTTTTCTATGCATTTAGTGAGTCAATGAATGGTGAGGCAATGAAAAGTGGCAGTGGCCTCTTAGGTGAATTGGTCCCAATGCTTTTATCTACAAGGTTCCCTTGCCATTCAAATAGGCTAGTTGCACTTGTGTATCTGGAAACAGTTACAAGATATATGAAGTTTGTACAGGAGAATACCCAATACATTCACATGGTTTTGGCTGTCTTTCTTGATGAAAGAGGTATACACCATCCAAATGTCAATGTGAGTCGAAGAGCAAGTTATCTGTTTATGAAGGCTGTGAGATTGCTAAAATTGAAGCTTGTGCCTTTTATAGAGAATATTCTGCAGAGTCTGCAAGACAGAGTCGCTGGATTTACAAGTATGGATTATACAAAAGATCTTTCTGCATCTGAAGATGGTAGTCACATTTTTGAGGCAATTGGTGTATTAATAGGTATGGAAGATGTGGCACCAGCAAAGCAGTCTGATTATCTCTCCTCACTTCTGACACCTCTTTGTCAACAGGTCGAAGCGTTGCTTATAAATGCCAAATTATTGACTCCTGAAGAGGCGCCACAAAAAATTGCTAATATTCAGCAGATAATTGTGGCGATTAATTCTCTCAGCAAGGGCTTCAGTGAGCGACTTGTAACTACTTGTCGTCCTGCAATAGGTCTCATGTTCAAGCAGACATTGGATGTTCTTCTGCAAGTACTTGTTGTGTTTCCTAATATAGAGCCTTTACGAAGTAAGGTAACGTCATTTATACACCGAATGGTGGAGACTTTAGGAGCATCCGTTTTCCCATACCTCCCAAAGGCACTGGAGCAATTGCTTGTGGATAGCCAGCCGAAGGAATTGGTTGGTCTGCTTGTATTGCTTAATCAACTGATATGCAAGTTCAACACATTATTTAGTGACATATTGGATGAAGTATTTCCTGCTATTGCTGGTAGGATATTGAACATTATTACAATAGATGCATTCCCTTCAGGACCTGGATCCAATACTGAGGAAAATCGGGAGCTGCAAGAAGTTCAGCGAACATTATATACATTTCTTCATGTGATAACTACACATGATCTATCATCTGTTTTCCTATCCCCCAAAAGTAGGAGCTACTTGCAGCCAATTATGCAGTTGCTTTTGTTCACGTCTTGTAAACACAAGGACATTCTTGTAAGAAAGGCATGTGTACAGATATTCATTAGATTAATTAAAGATTGGTGTACCATGCCTAATGGTGAAGAAAAGGTACCGGGTTTCCAGAGTTTTATAATAGAGACCTTTGCTACAAACTGTTGTTTGTACAGCCTGCTTGACAACTCCTTCGAGTTTCGTGACGCAAATACTCTTGTTTTGTTTGGAGAAATTGTACTGGCTCAGAAGGTCATGTATGAAAAGTTTGGCAATGATTTCCTAGTTCATTTTGTCTCGAAAGGCTTTCCAGCAGCACATTGCCCCCAAGATCTGGCTGAGAAATATTGCCAGCAGTTGCAGGGAAGTGATATCAAGGCATTGAAATCATTTTACCAGTCACTCATTGAAAACTTAAGGCTTCAGCAGAACGGGAACCTTCCTGTAAGATAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0000049 GO:0003006 GO:0003674 GO:0003676 GO:0003723 GO:0005049 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005635 GO:0005643 GO:0005737 GO:0005829 GO:0006403 GO:0006405 GO:0006409 GO:0006611 GO:0006810 GO:0006886 GO:0006913 GO:0007275 GO:0008104 GO:0008150 GO:0008536 GO:0009653 GO:0009791 GO:0009888 GO:0009908 GO:0009933 GO:0010014 GO:0012505 GO:0015031 GO:0015833 GO:0015931 GO:0016363 GO:0017016 GO:0019899 GO:0022414 GO:0031267 GO:0031503 GO:0031967 GO:0031974 GO:0031975 GO:0031981 GO:0032501 GO:0032502 GO:0032991 GO:0033036 GO:0034399 GO:0034613 GO:0042886 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0044422 GO:0044424 GO:0044428 GO:0044444 GO:0044446 GO:0044464 GO:0045184 GO:0046907 GO:0048367 GO:0048507 GO:0048532 GO:0048608 GO:0048731 GO:0048856 GO:0050657 GO:0050658 GO:0051020 GO:0051031 GO:0051168 GO:0051169 GO:0051179 GO:0051234 GO:0051236 GO:0051641 GO:0051649 GO:0061458 GO:0070013 GO:0070727 GO:0071166 GO:0071426 GO:0071431 GO:0071528 GO:0071702 GO:0071705 GO:0090567 GO:0097064 GO:0097159 GO:0140104 GO:0140142 GO:1901363

KEGG Pathways

Metabolic & Signaling

ko03013 map03013

Pfam Domains

Protein Families

Xpo1

Protein Analysis

989

Amino Acids

111.67

Weight (kDa)

5.35

Isoelectric Point (pI)

45.1

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Xpo1	PF08389	108 - 261	9.6e-37	Exportin 1-like protein
Exportin-T	PF19282	329 - 977	1.2e-86	Exportin-T

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0005044)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G72560 AT1G72560 AT1G72560 AT1G72560 AT1G72560 AT1G72560 AT1G72560
fragaria_vesca	FvH4_6g34890 FvH4_6g34890 FvH4_6g34890 FvH4_6g34890 FvH4_6g34890 FvH4_6g34890 FvH4_6g34890
malus_domestica	MD09G1181500.v1.1 MD17G1167700.v1.1
prunus_persica	Prupe.3G039600_v2.0.a1 Prupe.3G039600_v2.0.a1 Prupe.3G039600_v2.0.a1
pyrus_communis	pycom09g09910 pycom17g15940
rosa_chinensis	RchiOBHm_Chr2g0145781
rosa_laevigata	RLG00000020167
rosa_multiflora	Rmu_sc0000473.1_g000003
rosa_roxburghii	Rroxscaffold_152G00434750 Rroxscaffold_2G00100450
rosa_rugosa	Rorug02G0393200
rosa_samantha	Rh2BG459800 Rh2CG434400
rosa_wichuraiana	Rw2G036570

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	3 cut(s)	332, 1922, 2657
Acc16I	TGCGCA	1 cut(s)	1280
Acc65I	GGTACC	1 cut(s)	2635
AccB1I	GGYRCC	4 cut(s)	47, 1849, 1951, 2635
AccB7I	CCANNNNNTGG	1 cut(s)	2851
AccI	GTMKAC	1 cut(s)	1621
AciI	CCGC	3 cut(s)	812, 929, 1174
AclWI	GGATC	5 cut(s)	238, 1165, 1175, 2376, 2389
AcsI	RAATTY	2 cut(s)	151, 961
AcuI	CTGAAG	6 cut(s)	537, 1812, 1965, 1999, 2355, 2924
AcyI	GRCGYC	1 cut(s)	1952
AfiI	CCNNNNNNNGG	9 cut(s)	193, 253, 544, 2051, 2158, 2197, 2233, 2493, 2851
AflII	CTTAAG	1 cut(s)	2932
AjiI	CACGTC	1 cut(s)	2535
AjnI	CCWGG	2 cut(s)	354, 2377
AjuI	GAANNNNNNNTTGG	2 cut(s)	1028, 1060
Alw21I	GWGCWC	1 cut(s)	996
Alw26I	GTCTC	4 cut(s)	2060, 2156, 2657, 2818
AlwI	GGATC	5 cut(s)	238, 1165, 1175, 2376, 2389
AlwNI	CAGNNNCTG	4 cut(s)	187, 355, 1732, 2378
Ama87I	CYCGRG	1 cut(s)	537
AoxI	GGCC	1 cut(s)	1450
ApoI	RAATTY	2 cut(s)	151, 961
ArsI	GACNNNNNNTTYG	2 cut(s)	2693, 2725
AseI	ATTAAT	3 cut(s)	1829, 1995, 2594
Asp700I	GAANNNNTTC	2 cut(s)	1158, 2316
Asp718I	GGTACC	1 cut(s)	2635
AspLEI	GCGC	3 cut(s)	865, 1281, 1954
AspS9I	GGNCC	5 cut(s)	205, 320, 352, 1468, 2375
AsuC2I	CCSGG	3 cut(s)	538, 539, 2640
AsuHPI	GGTGA	4 cut(s)	454, 1439, 1472, 2636
AsuII	TTCGAA	1 cut(s)	149
AvaI	CYCGRG	1 cut(s)	537
AvaII	GGWCC	5 cut(s)	205, 320, 352, 1468, 2375
BaeGI	GKGCMC	1 cut(s)	50
BaeI	ACNNNNGTAYC	2 cut(s)	1511, 1544
BamHI	GGATCC	1 cut(s)	2381
BanI	GGYRCC	4 cut(s)	47, 1849, 1951, 2635
BanII	GRGCYC	1 cut(s)	996
BarI	GAAGNNNNNNTAC	2 cut(s)	2619, 2651
BauI	CACGAG	1 cut(s)	191
BbsI	GAAGAC	1 cut(s)	833
Bbv12I	GWGCWC	1 cut(s)	996
BccI	CCATC	4 cut(s)	734, 799, 1635, 1790
BciT130I	CCWGG	2 cut(s)	356, 2379
BciVI	GTATCC	1 cut(s)	805
BclI	TGATCA	2 cut(s)	37, 489
BcnI	CCSGG	3 cut(s)	538, 539, 2640
BcoDI	GTCTC	4 cut(s)	2060, 2156, 2657, 2818
BfaI	CTAG	4 cut(s)	639, 866, 1514, 2801
BfmI	CTRYAG	2 cut(s)	768, 1724
BfoI	RGCGCY	1 cut(s)	1955
BfrI	CTTAAG	1 cut(s)	2932
BfuI	GTATCC	1 cut(s)	805
BglII	AGATCT	2 cut(s)	1777, 2848
BmcAI	AGTACT	1 cut(s)	2094
Bme1390I	CCNGG	5 cut(s)	356, 538, 539, 2379, 2640
Bme18I	GGWCC	5 cut(s)	205, 320, 352, 1468, 2375
BmeT110I	CYCGRG	1 cut(s)	537
BmgBI	CACGTC	1 cut(s)	2535
BmgT120I	GGNCC	5 cut(s)	205, 320, 352, 1468, 2375
BmiI	GGNNCC	9 cut(s)	49, 810, 1470, 1493, 1851, 1953, 2383, 2637, 2954
BmrFI	CCNGG	5 cut(s)	356, 538, 539, 2379, 2640
BmsI	GCATC	9 cut(s)	132, 538, 640, 691, 961, 1020, 1796, 2183, 2350
BpiI	GAAGAC	1 cut(s)	833
BpmI	CTGGAG	2 cut(s)	1284, 2225
Bpu10I	CCTNAGC	1 cut(s)	348
Bpu14I	TTCGAA	1 cut(s)	149
BpuEI	CTTGAG	1 cut(s)	32
BpuMI	CCSGG	3 cut(s)	538, 539, 2640
BsaHI	GRCGYC	1 cut(s)	1952
BsaI	GGTCTC	2 cut(s)	2060, 2657
BsaJI	CCNNGG	5 cut(s)	506, 537, 760, 873, 966
BsaWI	WCCGGW	1 cut(s)	207
BsaXI	ACNNNNNCTCC	4 cut(s)	2163, 2193, 2739, 2769
Bsc4I	CCNNNNNNNGG	9 cut(s)	193, 253, 544, 2051, 2158, 2197, 2233, 2493, 2851
Bse1I	ACTGG	6 cut(s)	166, 925, 1367, 2208, 2763, 2914
Bse3DI	GCAATG	6 cut(s)	558, 660, 911, 1440, 2797, 2836
BseBI	CCWGG	2 cut(s)	356, 2379
BseDI	CCNNGG	5 cut(s)	506, 537, 760, 873, 966
BseGI	GGATG	9 cut(s)	109, 553, 708, 810, 976, 1627, 2083, 2174, 2314
BseLI	CCNNNNNNNGG	9 cut(s)	193, 253, 544, 2051, 2158, 2197, 2233, 2493, 2851
BseMI	GCAATG	6 cut(s)	558, 660, 911, 1440, 2797, 2836
BseMII	CTCAG	6 cut(s)	362, 900, 2017, 2382, 2777, 2847
BseNI	ACTGG	6 cut(s)	166, 925, 1367, 2208, 2763, 2914
BseRI	GAGGAG	2 cut(s)	673, 1867
BseSI	GKGCMC	1 cut(s)	50
BseYI	CCCAGC	1 cut(s)	773
BsgI	GTGCAG	2 cut(s)	173, 1371
BshFI	GGCC	1 cut(s)	1452
BshNI	GGYRCC	4 cut(s)	47, 1849, 1951, 2635
BsiHKAI	GWGCWC	1 cut(s)	996
BsiHKCI	CYCGRG	1 cut(s)	537
BsiSI	CCGG	3 cut(s)	208, 538, 2639
BslFI	GGGAC	1 cut(s)	1454
BslI	CCNNNNNNNGG	9 cut(s)	193, 253, 544, 2051, 2158, 2197, 2233, 2493, 2851
BsmAI	GTCTC	4 cut(s)	2060, 2156, 2657, 2818
BsmFI	GGGAC	1 cut(s)	1454
BsmI	GAATGC	3 cut(s)	475, 950, 2363
BsnI	GGCC	1 cut(s)	1452
Bso31I	GGTCTC	2 cut(s)	2060, 2657
BsoBI	CYCGRG	1 cut(s)	537
Bsp119I	TTCGAA	1 cut(s)	149
Bsp1286I	GDGCHC	2 cut(s)	50, 996
Bsp1407I	TGTACA	3 cut(s)	1561, 2575, 2688
BspACI	CCGC	3 cut(s)	812, 929, 1174
BspANI	GGCC	1 cut(s)	1452
BspCNI	CTCAG	6 cut(s)	361, 899, 2016, 2383, 2776, 2848
BspLI	GGNNCC	9 cut(s)	49, 810, 1470, 1493, 1851, 1953, 2383, 2637, 2954
BspMAI	CTGCAG	2 cut(s)	772, 1728
BspPI	GGATC	5 cut(s)	238, 1165, 1175, 2376, 2389
BspQI	GCTCTTC	2 cut(s)	621, 1645
BspT104I	TTCGAA	1 cut(s)	149
BspT107I	GGYRCC	4 cut(s)	47, 1849, 1951, 2635
BspTI	CTTAAG	1 cut(s)	2932
BspTNI	GGTCTC	2 cut(s)	2060, 2657
BsrDI	GCAATG	6 cut(s)	558, 660, 911, 1440, 2797, 2836
BsrGI	TGTACA	3 cut(s)	1561, 2575, 2688
BsrI	ACTGG	6 cut(s)	166, 925, 1367, 2208, 2763, 2914
BssECI	CCNNGG	5 cut(s)	506, 537, 760, 873, 966
BssNAI	GTATAC	1 cut(s)	1622
BssNI	GRCGYC	1 cut(s)	1952
BssSI	CACGAG	1 cut(s)	191
BssT1I	CCWWGG	1 cut(s)	873
Bst1107I	GTATAC	1 cut(s)	1622
Bst2BI	CACGAG	1 cut(s)	191
Bst2UI	CCWGG	2 cut(s)	356, 2379
Bst4CI	ACNGT	5 cut(s)	52, 89, 1193, 1540, 2681
Bst6I	CTCTTC	4 cut(s)	621, 1368, 1645, 1941
BstACI	GRCGYC	1 cut(s)	1952
BstAFI	CTTAAG	1 cut(s)	2932
BstAPI	GCANNNNNTGC	2 cut(s)	187, 1732
BstAUI	TGTACA	3 cut(s)	1561, 2575, 2688
BstBI	TTCGAA	1 cut(s)	149
BstC8I	GCNNGC	3 cut(s)	2228, 2696, 2870
BstDEI	CTNAG	7 cut(s)	348, 886, 1456, 2003, 2391, 2763, 2856
BstENI	CCTNNNNNAGG	3 cut(s)	191, 2049, 2195
BstF5I	GGATG	9 cut(s)	109, 553, 708, 810, 976, 1627, 2083, 2174, 2314
BstH2I	RGCGCY	1 cut(s)	1955
BstHHI	GCGC	3 cut(s)	865, 1281, 1954
BstMAI	GTCTC	4 cut(s)	2060, 2156, 2657, 2818
BstMWI	GCNNNNNNNGC	8 cut(s)	187, 869, 935, 954, 1346, 1732, 2257, 2515
BstNI	CCWGG	2 cut(s)	356, 2379
BstNSI	RCATGY	2 cut(s)	273, 2574
BstSCI	CCNGG	5 cut(s)	354, 536, 537, 2377, 2638
BstSFI	CTRYAG	2 cut(s)	768, 1724
BstSLI	GKGCMC	1 cut(s)	50
BstV2I	GAAGAC	1 cut(s)	833
BstX2I	RGATCY	4 cut(s)	1170, 1777, 2381, 2848
BstXI	CCANNNNNNTGG	1 cut(s)	805
BstYI	RGATCY	4 cut(s)	1170, 1777, 2381, 2848
BstZ17I	GTATAC	1 cut(s)	1622
BsuI	GTATCC	1 cut(s)	805
BsuRI	GGCC	1 cut(s)	1452
BtrI	CACGTC	1 cut(s)	2535
BtsCI	GGATG	9 cut(s)	109, 553, 708, 810, 976, 1627, 2083, 2174, 2314
BtsI	GCAGTG	3 cut(s)	569, 795, 1453
BtsIMutI	CAGTG	6 cut(s)	534, 569, 795, 1453, 2023, 2201
Cac8I	GCNNGC	3 cut(s)	2228, 2696, 2870
CaiI	CAGNNNCTG	4 cut(s)	187, 355, 1732, 2378
CfoI	GCGC	3 cut(s)	865, 1281, 1954
Cfr13I	GGNCC	5 cut(s)	205, 320, 352, 1468, 2375
Cfr9I	CCCGGG	1 cut(s)	537
CseI	GACGC	2 cut(s)	1338, 2732
CviAII	CATG	9 cut(s)	270, 1136, 1588, 2059, 2444, 2459, 2571, 2614, 2773
DdeI	CTNAG	7 cut(s)	348, 886, 1456, 2003, 2391, 2763, 2856
DinI	GGCGCC	1 cut(s)	1953
DraI	TTTAAA	1 cut(s)	952
Eam1104I	CTCTTC	4 cut(s)	621, 1368, 1645, 1941
EarI	CTCTTC	4 cut(s)	621, 1368, 1645, 1941
Ecl136II	GAGCTC	1 cut(s)	994
Eco130I	CCWWGG	1 cut(s)	873
Eco24I	GRGCYC	1 cut(s)	996
Eco31I	GGTCTC	2 cut(s)	2060, 2657
Eco32I	GATATC	1 cut(s)	2890
Eco47I	GGWCC	5 cut(s)	205, 320, 352, 1468, 2375
Eco53kI	GAGCTC	1 cut(s)	994
Eco57I	CTGAAG	6 cut(s)	537, 1812, 1965, 1999, 2355, 2924
Eco88I	CYCGRG	1 cut(s)	537
EcoICRI	GAGCTC	1 cut(s)	994
EcoNI	CCTNNNNNAGG	3 cut(s)	191, 2049, 2195
EcoO109I	RGGNCCY	3 cut(s)	320, 352, 2375
EcoRI	GAATTC	1 cut(s)	961
EcoRII	CCWGG	2 cut(s)	354, 2377
EcoRV	GATATC	1 cut(s)	2890
EcoT14I	CCWWGG	1 cut(s)	873
EcoT22I	ATGCAT	2 cut(s)	1408, 2365
EcoT38I	GRGCYC	1 cut(s)	996
EgeI	GGCGCC	1 cut(s)	1953
EheI	GGCGCC	1 cut(s)	1953
ErhI	CCWWGG	1 cut(s)	873
FaeI	CATG	9 cut(s)	273, 1139, 1591, 2062, 2447, 2462, 2574, 2617, 2776
FalI	AAGNNNNNCTT	6 cut(s)	1374, 1406, 1480, 1512, 1902, 1934
FaqI	GGGAC	1 cut(s)	1454
FatI	CATG	9 cut(s)	269, 1135, 1587, 2058, 2443, 2458, 2570, 2613, 2772
FbaI	TGATCA	2 cut(s)	37, 489
FblI	GTMKAC	1 cut(s)	1621
FokI	GGATG	9 cut(s)	116, 560, 695, 817, 983, 1614, 2090, 2161, 2321
FriOI	GRGCYC	1 cut(s)	996
FspBI	CTAG	4 cut(s)	639, 866, 1514, 2801
FspI	TGCGCA	1 cut(s)	1280
GlaI	GCGC	3 cut(s)	864, 1280, 1953
GsaI	CCCAGC	1 cut(s)	777
GsuI	CTGGAG	2 cut(s)	1284, 2225
HaeII	RGCGCY	1 cut(s)	1955
HaeIII	GGCC	1 cut(s)	1452
HapII	CCGG	3 cut(s)	208, 538, 2639
HgaI	GACGC	2 cut(s)	1338, 2732
HhaI	GCGC	3 cut(s)	865, 1281, 1954
Hin1I	GRCGYC	1 cut(s)	1952
Hin1II	CATG	9 cut(s)	273, 1139, 1591, 2062, 2447, 2462, 2574, 2617, 2776
Hin6I	GCGC	3 cut(s)	863, 1279, 1952
HinP1I	GCGC	3 cut(s)	863, 1279, 1952
HincII	GTYRAC	1 cut(s)	1901
HindII	GTYRAC	1 cut(s)	1901
HindIII	AAGCTT	2 cut(s)	955, 1697
HinfI	GANTC	9 cut(s)	838, 884, 1049, 1102, 1415, 1645, 1729, 1743, 1939
HpaII	CCGG	3 cut(s)	208, 538, 2639
HphI	GGTGA	4 cut(s)	454, 1439, 1472, 2636
Hpy166II	GTNNAC	6 cut(s)	1622, 1901, 2532, 2543, 2576, 2610
Hpy8I	GTNNAC	6 cut(s)	1622, 1901, 2532, 2543, 2576, 2610
Hpy99I	CGWCG	2 cut(s)	82, 855
HpyAV	CCTTC	8 cut(s)	67, 311, 1666, 2227, 2379, 2719, 2761, 2966
HpyCH4III	ACNGT	5 cut(s)	52, 89, 1193, 1540, 2681
HpyCH4IV	ACGT	2 cut(s)	2138, 2534
HpyF10VI	GCNNNNNNNGC	8 cut(s)	187, 869, 935, 954, 1346, 1732, 2257, 2515
HpyF3I	CTNAG	7 cut(s)	348, 886, 1456, 2003, 2391, 2763, 2856
HpySE526I	ACGT	2 cut(s)	2138, 2534
Hsp92I	GRCGYC	1 cut(s)	1952
Hsp92II	CATG	9 cut(s)	273, 1139, 1591, 2062, 2447, 2462, 2574, 2617, 2776
HspAI	GCGC	3 cut(s)	863, 1279, 1952
KasI	GGCGCC	1 cut(s)	1951
KpnI	GGTACC	1 cut(s)	2639
Ksp22I	TGATCA	2 cut(s)	37, 489
LguI	GCTCTTC	2 cut(s)	621, 1645
LmnI	GCTCC	7 cut(s)	808, 991, 1303, 2171, 2206, 2404, 2496
LweI	GCATC	9 cut(s)	132, 538, 640, 691, 961, 1020, 1796, 2183, 2350
MaeI	CTAG	4 cut(s)	639, 866, 1514, 2801
MaeII	ACGT	2 cut(s)	2138, 2534
MaeIII	GTNAC	9 cut(s)	358, 417, 1540, 1802, 2029, 2134, 2297, 2720, 2916
MfeI	CAATTG	4 cut(s)	264, 422, 1818, 2210
MflI	RGATCY	4 cut(s)	1170, 1777, 2381, 2848
MhlI	GDGCHC	2 cut(s)	50, 996
Mly113I	GGCGCC	1 cut(s)	1952
MlyI	GAGTC	7 cut(s)	847, 878, 1424, 1654, 1738, 1752, 1933
MmeI	TCCRAC	1 cut(s)	1026
Mph1103I	ATGCAT	2 cut(s)	1408, 2365
MroXI	GAANNNNTTC	2 cut(s)	1158, 2316
MslI	CAYNNNNRTG	2 cut(s)	1586, 1632
MspA1I	CMGCKG	2 cut(s)	773, 1129
MspCI	CTTAAG	1 cut(s)	2932
MspI	CCGG	3 cut(s)	208, 538, 2639
MspR9I	CCNGG	5 cut(s)	356, 538, 539, 2379, 2640
MunI	CAATTG	4 cut(s)	264, 422, 1818, 2210
Mva1269I	GAATGC	3 cut(s)	475, 950, 2363
MvaI	CCWGG	2 cut(s)	356, 2379
MwoI	GCNNNNNNNGC	8 cut(s)	187, 869, 935, 954, 1346, 1732, 2257, 2515
NarI	GGCGCC	1 cut(s)	1952
NciI	CCSGG	3 cut(s)	538, 539, 2640
NlaIII	CATG	9 cut(s)	273, 1139, 1591, 2062, 2447, 2462, 2574, 2617, 2776
NlaIV	GGNNCC	9 cut(s)	49, 810, 1470, 1493, 1851, 1953, 2383, 2637, 2954
NmuCI	GTSAC	5 cut(s)	417, 1802, 2297, 2720, 2916
NsbI	TGCGCA	1 cut(s)	1280
NsiI	ATGCAT	2 cut(s)	1408, 2365
NspI	RCATGY	2 cut(s)	273, 2574
NspV	TTCGAA	1 cut(s)	149
PacI	TTAATTAA	1 cut(s)	2598
PciSI	GCTCTTC	2 cut(s)	621, 1645
PctI	GAATGC	3 cut(s)	475, 950, 2363
PdmI	GAANNNNTTC	2 cut(s)	1158, 2316
PfeI	GAWTC	2 cut(s)	1049, 1102
PflFI	GACNNNGTC	1 cut(s)	1742
PflMI	CCANNNNNTGG	1 cut(s)	2851
PleI	GAGTC	7 cut(s)	846, 878, 1423, 1653, 1737, 1751, 1933
PluTI	GGCGCC	1 cut(s)	1955
PpsI	GAGTC	7 cut(s)	846, 878, 1423, 1653, 1737, 1751, 1933
PpuMI	RGGWCCY	3 cut(s)	320, 352, 2375
PshBI	ATTAAT	3 cut(s)	1829, 1995, 2594
PsiI	TTATAA	3 cut(s)	332, 1922, 2657
Psp124BI	GAGCTC	1 cut(s)	996
Psp5II	RGGWCCY	3 cut(s)	320, 352, 2375
Psp6I	CCWGG	2 cut(s)	354, 2377
PspFI	CCCAGC	1 cut(s)	773
PspGI	CCWGG	2 cut(s)	354, 2377
PspN4I	GGNNCC	9 cut(s)	49, 810, 1470, 1493, 1851, 1953, 2383, 2637, 2954
PspPI	GGNCC	5 cut(s)	205, 320, 352, 1468, 2375
PspPPI	RGGWCCY	3 cut(s)	320, 352, 2375
PsrI	GAACNNNNNNTAC	2 cut(s)	2416, 2448
PstI	CTGCAG	2 cut(s)	772, 1728
PstNI	CAGNNNCTG	4 cut(s)	187, 355, 1732, 2378
PsuI	RGATCY	4 cut(s)	1170, 1777, 2381, 2848
PsyI	GACNNNGTC	1 cut(s)	1742
PvuII	CAGCTG	2 cut(s)	773, 1129
RseI	CAYNNNNRTG	2 cut(s)	1586, 1632
SacI	GAGCTC	1 cut(s)	996
SapI	GCTCTTC	2 cut(s)	621, 1645
Sau96I	GGNCC	5 cut(s)	205, 320, 352, 1468, 2375
ScaI	AGTACT	1 cut(s)	2094
SchI	GAGTC	7 cut(s)	847, 878, 1424, 1654, 1738, 1752, 1933
ScrFI	CCNGG	5 cut(s)	356, 538, 539, 2379, 2640
SduI	GDGCHC	2 cut(s)	50, 996
SfaNI	GCATC	9 cut(s)	132, 538, 640, 691, 961, 1020, 1796, 2183, 2350
SfcI	CTRYAG	2 cut(s)	768, 1724
SfoI	GGCGCC	1 cut(s)	1953
SfuI	TTCGAA	1 cut(s)	149
SinI	GGWCC	5 cut(s)	205, 320, 352, 1468, 2375
SmaI	CCCGGG	1 cut(s)	539
SmiMI	CAYNNNNRTG	2 cut(s)	1586, 1632
SmlI	CTYRAG	2 cut(s)	11, 2932
SmoI	CTYRAG	2 cut(s)	11, 2932
SsiI	CCGC	3 cut(s)	812, 929, 1174
SspDI	GGCGCC	1 cut(s)	1951
SspI	AATATT	3 cut(s)	1720, 1972, 2864
SspMI	CTAG	4 cut(s)	639, 866, 1514, 2801
SstI	GAGCTC	1 cut(s)	996
StyD4I	CCNGG	5 cut(s)	354, 536, 537, 2377, 2638
StyI	CCWWGG	1 cut(s)	873
TaaI	ACNGT	5 cut(s)	52, 89, 1193, 1540, 2681
TaiI	ACGT	2 cut(s)	2141, 2537
TaqI	TCGA	7 cut(s)	149, 375, 853, 1648, 1908, 2712, 2816
TatI	WGTACW	5 cut(s)	1561, 2092, 2575, 2688, 2755
TauI	GCSGC	1 cut(s)	814
TfiI	GAWTC	2 cut(s)	1049, 1102
TscAI	CASTG	6 cut(s)	534, 569, 795, 1453, 2023, 2208
TseFI	GTSAC	5 cut(s)	417, 1802, 2297, 2720, 2916
Tsp45I	GTSAC	5 cut(s)	417, 1802, 2297, 2720, 2916
TspGWI	ACGGA	4 cut(s)	95, 839, 1006, 2167
TspMI	CCCGGG	1 cut(s)	537
TspRI	CASTG	6 cut(s)	534, 569, 795, 1453, 2023, 2208
Tth111I	GACNNNGTC	1 cut(s)	1742
Van91I	CCANNNNNTGG	1 cut(s)	2851
Vha464I	CTTAAG	1 cut(s)	2932
VpaK11BI	GGWCC	5 cut(s)	205, 320, 352, 1468, 2375
VspI	ATTAAT	3 cut(s)	1829, 1995, 2594
XagI	CCTNNNNNAGG	3 cut(s)	191, 2049, 2195
XapI	RAATTY	2 cut(s)	151, 961
XceI	RCATGY	2 cut(s)	273, 2574
XmaI	CCCGGG	1 cut(s)	537
XmiI	GTMKAC	1 cut(s)	1621
XmnI	GAANNNNTTC	2 cut(s)	1158, 2316
XspI	CTAG	4 cut(s)	639, 866, 1514, 2801
ZrmI	AGTACT	1 cut(s)	2094
Zsp2I	ATGCAT	2 cut(s)	1408, 2365

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.