Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr2C

Orthogroup ID

OG0005044

Physical Location & Seq

Genomic Coordinates Forward (+)

59055377 .. 59064389

Gene Structure 9013 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh2CG434400.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2592 bp

ATGGCTGATCTTGAGAAAGCTATACTTATAGTTTTTGATCAATCGGGCACCGTTCATTCCGAGCTGAAACAGAAGGCGACGGAATACTGTGATAAAATTAAGGATGAACAAGCGATTTGTAGCATCTGCATTGAAAAGATATGTTTTTCGAATTTATATCAAGTCCAGTTTTGGTGTTTGCAGACGCTGCACGAGGTTGTTAAGGTCCGGTACTCATCAATTAGTCCAGACGAGAGGTATTTGATCCGAAAATCGGTGTTTTCAATTGCATGTTTTGGTGCTATTGATGATAACAACGTTGTTAGGGTTTTAGAAGGTCCTGCATTTATAAAGAACAAACTTGCTCAGGTCCTGGTCACTTTGATTTATTTCGAGTACCCGTTAATTTGGTCATCTGTGTTTGTGGATTTCTTGTCACAATTGAGTAAAGGGGCATTGGTGATCGATATGTTTTGTCGGGTTTTGAATGCTTTGGATGATGAACTGATCAATGTGGATTACCCTCGGACACCTGAAGAACTATCAGTGGCAACCCGGGTTAAGGATGCAATGAGGCAGCAGTGTGTAGCTCAAATAGTTAGAGCTTGGTATGATATTGTGTCTATGTATAGGAACTCTGATGAAGAGCTGTGTACTAGTGTATTAGAAGCAATGAGGAGGTTTATTGCTTGGATTGATATTGGTTTAATTGTAAATGATGCGTTCATCCCATTGTTGTTTGATTTGGTGTTGGTTGATGGGCTGTCTGAACAACTCCGAGGTGCTGCAGCTGGGTGTTTGACAGCAGTGGTATCCAAAAGGATGGAGCCGCAATCAAAACTACCACTATTGCAGAGTCTTCAAATCCACCGAGTGTTTGCACTAGTAGCCAAGGATAGCGACTCAGAGTTGGTTTCCAAAGTAGCTGCATTGCTTACTGGATATGCGGTTGAGGCTCTTGAATGCTTTAAAAGCTTGAATTCCGAGGATGCGAAGGGTGTTTCAATGGAGCTCTTGAATGAAGTTCTGCCCTCCGTATTCTATGTGATGCAGAATTGTGAGTTGGAATCTACATTTAGTATTGTGCAATTTCTTTTAGGTTATGTTGCCACAATGAAGAATCTTTCTCCATTGAGGGAAACACAGCTGCTTCATGTGGGTCAGATTTTGGAAGTAATTCGTACAGAGATCCGCTATGATCCTATGTACCGTGATAATCTTGATACATTGGATAAGATTGGAAAGGAAGAAGAAGATAGAATGGTTGAGTTCAGAAAGGATTTGTTTGTGCTGTTGCGCAATATAGGTCGGGTAGCTCCAGATGTTTGTCAGATATTCATTAGAAACTCATTGGCTGCTTCTGTTGCGTCCTCGTCAGACTGGAATGTTGAAGAGGTGGAAGCTGCACTTTCTCTTTTCTATGCATTTGGTGAGTCAATGAATGGTGAGGCAATGAAAAGTGGCAGTGGCCTCTTAGGTGAATTGGTACCAATGCTTTTATCTACAAGGTTCCCTTGCCATTCAAATAGGCTAGTTGCACTTGTGTATCTGGAAACAGTTACAAGATATATGAAGTTTGTACAGGAGAATACCCAATACATTCACATGGTTTTGGCTGTCTTTCTTGATGAAAGAGGTATACACCATCCAAATGTCAATGTGAGTCGAAGAGCAAGTTATCTGTTTATGAAGGCTGTGAGATTGCTAAAATTGAAGCTTGTGCCTTTTATAGAGAATATTCTGCAGAGTCTGCAAGACAGAGTCGCAGGATTTACAAGTATGGATTATACAAAAGATCTCTCTGCATCTGAAGATGGTAGTCACATTTTTGAGGCAATTGGTGTATTAATAGGTATGGAAGATGTGGCACCAGCAAAGCAGTCTGATTATCTCTCCTCACTTCTGACACCTCTCTGTCAACAGGTTGAAGCGTTGCTTATAAATGCCAAAGTATTGACTCCTGAAGAGGCACCACAAAAAATTGCTAATATTCAGCAGATAATTGTGGCGATTAATTCTCTCAGCAAGGGCTTCAGTGAGCGTCTTGTAACTACTAGTCGCCCTGCAATAGGTCTCATGTTCAAGCAGACATTGGATGTTCTTCTGCAAGTACTTGTTGTGTTTCCTAATATAGAGCCTTTACGAAGTAAGGTAACGTCATTTATACACCGAATGGTGGAGACTTTAGGAGCATCCGTTTTCCCATACCTCCCAAAGGCACTGGAGCAATTGCTTGTGGATAGCCAGCCGAAGGAATTGGTTGGTCTGCTTGTATTGCTTAATCAACTGATATGCAAGTTCAACACATTATTTAGTGACATATTGGATGAAGTATTTCCTGCTATTGCTGGTAGGATATTGAACATTATTACAATAGATGCATTCCCTTCAGGACCTGGATCCAATACTGAGGAAAATCGGGAACTGCAAGAAGTTCAGCGAACATTATATACATTTCTTCATGTGATAACTACACATGATCTATCATCTGTTTTCTTATCCCCCAAAAGTAGGAGCTACTTGCAGCCAATTATGCAGTTGCTTTTGTTCACGTCTTGTAAACACAAGGACATTCTTGTAAGAAAGGTAGGTGTATTTGGTTTACCTTTGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0000049 GO:0003006 GO:0003674 GO:0003676 GO:0003723 GO:0005049 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005635 GO:0005643 GO:0005737 GO:0005829 GO:0006403 GO:0006405 GO:0006409 GO:0006611 GO:0006810 GO:0006886 GO:0006913 GO:0007275 GO:0008104 GO:0008150 GO:0008536 GO:0009653 GO:0009791 GO:0009888 GO:0009908 GO:0009933 GO:0010014 GO:0012505 GO:0015031 GO:0015833 GO:0015931 GO:0016363 GO:0017016 GO:0019899 GO:0022414 GO:0031267 GO:0031503 GO:0031967 GO:0031974 GO:0031975 GO:0031981 GO:0032501 GO:0032502 GO:0032991 GO:0033036 GO:0034399 GO:0034613 GO:0042886 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0044422 GO:0044424 GO:0044428 GO:0044444 GO:0044446 GO:0044464 GO:0045184 GO:0046907 GO:0048367 GO:0048507 GO:0048532 GO:0048608 GO:0048731 GO:0048856 GO:0050657 GO:0050658 GO:0051020 GO:0051031 GO:0051168 GO:0051169 GO:0051179 GO:0051234 GO:0051236 GO:0051641 GO:0051649 GO:0061458 GO:0070013 GO:0070727 GO:0071166 GO:0071426 GO:0071431 GO:0071528 GO:0071702 GO:0071705 GO:0090567 GO:0097064 GO:0097159 GO:0140104 GO:0140142 GO:1901363

KEGG Pathways

Metabolic & Signaling

ko03013 map03013

Pfam Domains

Protein Families

Xpo1

Protein Analysis

863

Amino Acids

97.09

Weight (kDa)

5.31

Isoelectric Point (pI)

43.77

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Xpo1	PF08389	107 - 260	4.6e-37	Exportin 1-like protein
Exportin-T	PF19282	328 - 857	5.9e-64	Exportin-T

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Align Labels (Cladogram)

Image

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Orthologous Genes (Group: OG0005044)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G72560 AT1G72560 AT1G72560 AT1G72560 AT1G72560 AT1G72560 AT1G72560
fragaria_vesca	FvH4_6g34890 FvH4_6g34890 FvH4_6g34890 FvH4_6g34890 FvH4_6g34890 FvH4_6g34890 FvH4_6g34890
malus_domestica	MD09G1181500.v1.1 MD17G1167700.v1.1
prunus_persica	Prupe.3G039600_v2.0.a1 Prupe.3G039600_v2.0.a1 Prupe.3G039600_v2.0.a1
pyrus_communis	pycom09g09910 pycom17g15940
rosa_chinensis	RchiOBHm_Chr2g0145781
rosa_laevigata	RLG00000020167
rosa_multiflora	Rmu_sc0000473.1_g000003
rosa_roxburghii	Rroxscaffold_152G00434750 Rroxscaffold_2G00100450
rosa_rugosa	Rorug02G0393200
rosa_samantha	Rh2BG459800 Rh2CG434400
rosa_wichuraiana	Rw2G036570

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	2 cut(s)	329, 1919
Acc16I	TGCGCA	1 cut(s)	1277
Acc65I	GGTACC	1 cut(s)	1465
AccB1I	GGYRCC	4 cut(s)	47, 1465, 1846, 1948
AccI	GTMKAC	1 cut(s)	1618
AciI	CCGC	3 cut(s)	809, 926, 1171
AclI	AACGTT	1 cut(s)	297
AclWI	GGATC	5 cut(s)	238, 1162, 1172, 2373, 2386
AcsI	RAATTY	2 cut(s)	151, 958
AcuI	CTGAAG	5 cut(s)	534, 1809, 1962, 1996, 2352
AdeI	CACNNNGTG	1 cut(s)	853
AfaI	GTAC	8 cut(s)	212, 377, 634, 1162, 1187, 1467, 1560, 2091
AfiI	CCNNNNNNNGG	7 cut(s)	253, 541, 2048, 2155, 2194, 2230, 2490
AhlI	ACTAGT	3 cut(s)	635, 862, 2033
AjiI	CACGTC	1 cut(s)	2532
AjnI	CCWGG	2 cut(s)	351, 2374
AjuI	GAANNNNNNNTTGG	2 cut(s)	1025, 1057
Alw21I	GWGCWC	1 cut(s)	993
Alw26I	GTCTC	2 cut(s)	2057, 2153
AlwI	GGATC	5 cut(s)	238, 1162, 1172, 2373, 2386
AlwNI	CAGNNNCTG	4 cut(s)	187, 352, 1729, 2375
Ama87I	CYCGRG	1 cut(s)	534
AoxI	GGCC	1 cut(s)	1447
ApeKI	GCWGC	9 cut(s)	187, 556, 764, 767, 905, 1126, 1334, 1382, 2503
ApoI	RAATTY	2 cut(s)	151, 958
AseI	ATTAAT	2 cut(s)	1826, 1992
Asp700I	GAANNNNTTC	2 cut(s)	1155, 2313
Asp718I	GGTACC	1 cut(s)	1465
AspLEI	GCGC	1 cut(s)	1278
AspS9I	GGNCC	4 cut(s)	205, 317, 349, 2372
AsuC2I	CCSGG	2 cut(s)	535, 536
AsuHPI	GGTGA	4 cut(s)	451, 1421, 1436, 1469
AsuII	TTCGAA	1 cut(s)	149
AvaI	CYCGRG	1 cut(s)	534
AvaII	GGWCC	4 cut(s)	205, 317, 349, 2372
BaeGI	GKGCMC	1 cut(s)	50
BaeI	ACNNNNGTAYC	2 cut(s)	1508, 1541
BamHI	GGATCC	1 cut(s)	2378
BanI	GGYRCC	4 cut(s)	47, 1465, 1846, 1948
BanII	GRGCYC	1 cut(s)	993
BauI	CACGAG	1 cut(s)	191
BbsI	GAAGAC	1 cut(s)	830
Bbv12I	GWGCWC	1 cut(s)	993
BbvI	GCAGC	9 cut(s)	174, 568, 751, 779, 892, 1113, 1321, 1369, 2515
BccI	CCATC	4 cut(s)	731, 796, 1632, 1787
BciT130I	CCWGG	2 cut(s)	353, 2376
BciVI	GTATCC	1 cut(s)	802
BclI	TGATCA	2 cut(s)	37, 486
BcnI	CCSGG	2 cut(s)	535, 536
BcoDI	GTCTC	2 cut(s)	2057, 2153
BcuI	ACTAGT	3 cut(s)	635, 862, 2033
BfaI	CTAG	4 cut(s)	636, 863, 1511, 2034
BfmI	CTRYAG	2 cut(s)	765, 1721
BfuI	GTATCC	1 cut(s)	802
BglII	AGATCT	1 cut(s)	1774
BmcAI	AGTACT	1 cut(s)	2091
Bme1390I	CCNGG	4 cut(s)	353, 535, 536, 2376
Bme18I	GGWCC	4 cut(s)	205, 317, 349, 2372
BmeT110I	CYCGRG	1 cut(s)	534
BmgBI	CACGTC	1 cut(s)	2532
BmgT120I	GGNCC	4 cut(s)	205, 317, 349, 2372
BmiI	GGNNCC	7 cut(s)	49, 807, 1467, 1490, 1848, 1950, 2380
BmrFI	CCNGG	4 cut(s)	353, 535, 536, 2376
BmsI	GCATC	8 cut(s)	132, 535, 688, 958, 1017, 1793, 2180, 2347
BpiI	GAAGAC	1 cut(s)	830
BpmI	CTGGAG	2 cut(s)	1281, 2222
Bpu10I	CCTNAGC	1 cut(s)	345
Bpu14I	TTCGAA	1 cut(s)	149
BpuEI	CTTGAG	1 cut(s)	32
BpuMI	CCSGG	2 cut(s)	535, 536
Bsa29I	ATCGAT	1 cut(s)	444
BsaI	GGTCTC	1 cut(s)	2057
BsaJI	CCNNGG	5 cut(s)	503, 534, 757, 870, 963
BsaWI	WCCGGW	1 cut(s)	207
BsaXI	ACNNNNNCTCC	2 cut(s)	2160, 2190
Bsc4I	CCNNNNNNNGG	7 cut(s)	253, 541, 2048, 2155, 2194, 2230, 2490
Bse1I	ACTGG	4 cut(s)	166, 922, 1364, 2205
Bse3DI	GCAATG	4 cut(s)	555, 657, 908, 1437
BseBI	CCWGG	2 cut(s)	353, 2376
BseCI	ATCGAT	1 cut(s)	444
BseDI	CCNNGG	5 cut(s)	503, 534, 757, 870, 963
BseLI	CCNNNNNNNGG	7 cut(s)	253, 541, 2048, 2155, 2194, 2230, 2490
BseMI	GCAATG	4 cut(s)	555, 657, 908, 1437
BseMII	CTCAG	4 cut(s)	359, 897, 2014, 2379
BseNI	ACTGG	4 cut(s)	166, 922, 1364, 2205
BseRI	GAGGAG	2 cut(s)	670, 1864
BseSI	GKGCMC	1 cut(s)	50
BseXI	GCAGC	9 cut(s)	174, 568, 751, 779, 892, 1113, 1321, 1369, 2515
BseYI	CCCAGC	1 cut(s)	770
BsgI	GTGCAG	2 cut(s)	173, 1368
BshFI	GGCC	1 cut(s)	1449
BshNI	GGYRCC	4 cut(s)	47, 1465, 1846, 1948
BshVI	ATCGAT	1 cut(s)	444
BsiHKAI	GWGCWC	1 cut(s)	993
BsiHKCI	CYCGRG	1 cut(s)	534
BsiSI	CCGG	2 cut(s)	208, 535
BslI	CCNNNNNNNGG	7 cut(s)	253, 541, 2048, 2155, 2194, 2230, 2490
BsmAI	GTCTC	2 cut(s)	2057, 2153
BsmI	GAATGC	3 cut(s)	472, 947, 2360
BsnI	GGCC	1 cut(s)	1449
Bso31I	GGTCTC	1 cut(s)	2057
BsoBI	CYCGRG	1 cut(s)	534
Bsp119I	TTCGAA	1 cut(s)	149
Bsp1286I	GDGCHC	2 cut(s)	50, 993
Bsp1407I	TGTACA	1 cut(s)	1558
BspACI	CCGC	3 cut(s)	809, 926, 1171
BspANI	GGCC	1 cut(s)	1449
BspCNI	CTCAG	4 cut(s)	358, 896, 2013, 2380
BspDI	ATCGAT	1 cut(s)	444
BspLI	GGNNCC	7 cut(s)	49, 807, 1467, 1490, 1848, 1950, 2380
BspMAI	CTGCAG	2 cut(s)	769, 1725
BspPI	GGATC	5 cut(s)	238, 1162, 1172, 2373, 2386
BspQI	GCTCTTC	2 cut(s)	618, 1642
BspT104I	TTCGAA	1 cut(s)	149
BspT107I	GGYRCC	4 cut(s)	47, 1465, 1846, 1948
BspTNI	GGTCTC	1 cut(s)	2057
BsrDI	GCAATG	4 cut(s)	555, 657, 908, 1437
BsrGI	TGTACA	1 cut(s)	1558
BsrI	ACTGG	4 cut(s)	166, 922, 1364, 2205
BssECI	CCNNGG	5 cut(s)	503, 534, 757, 870, 963
BssNAI	GTATAC	1 cut(s)	1619
BssSI	CACGAG	1 cut(s)	191
BssT1I	CCWWGG	1 cut(s)	870
Bst1107I	GTATAC	1 cut(s)	1619
Bst2BI	CACGAG	1 cut(s)	191
Bst2UI	CCWGG	2 cut(s)	353, 2376
Bst4CI	ACNGT	4 cut(s)	52, 89, 1190, 1537
Bst6I	CTCTTC	4 cut(s)	618, 1365, 1642, 1938
BstAPI	GCANNNNNTGC	2 cut(s)	187, 1729
BstAUI	TGTACA	1 cut(s)	1558
BstBI	TTCGAA	1 cut(s)	149
BstC8I	GCNNGC	1 cut(s)	2225
BstDEI	CTNAG	5 cut(s)	345, 883, 1453, 2000, 2388
BstENI	CCTNNNNNAGG	2 cut(s)	2046, 2192
BstHHI	GCGC	1 cut(s)	1278
BstMAI	GTCTC	2 cut(s)	2057, 2153
BstMWI	GCNNNNNNNGC	8 cut(s)	187, 866, 932, 951, 1343, 1729, 2254, 2512
BstNI	CCWGG	2 cut(s)	353, 2376
BstNSI	RCATGY	1 cut(s)	273
BstSCI	CCNGG	4 cut(s)	351, 533, 534, 2374
BstSFI	CTRYAG	2 cut(s)	765, 1721
BstSLI	GKGCMC	1 cut(s)	50
BstV1I	GCAGC	9 cut(s)	174, 568, 751, 779, 892, 1113, 1321, 1369, 2515
BstV2I	GAAGAC	1 cut(s)	830
BstX2I	RGATCY	3 cut(s)	1167, 1774, 2378
BstXI	CCANNNNNNTGG	1 cut(s)	802
BstYI	RGATCY	3 cut(s)	1167, 1774, 2378
BstZ17I	GTATAC	1 cut(s)	1619
Bsu15I	ATCGAT	1 cut(s)	444
BsuI	GTATCC	1 cut(s)	802
BsuRI	GGCC	1 cut(s)	1449
BsuTUI	ATCGAT	1 cut(s)	444
BtrI	CACGTC	1 cut(s)	2532
BtsI	GCAGTG	3 cut(s)	566, 792, 1450
BtsIMutI	CAGTG	6 cut(s)	531, 566, 792, 1450, 2020, 2198
Cac8I	GCNNGC	1 cut(s)	2225
CaiI	CAGNNNCTG	4 cut(s)	187, 352, 1729, 2375
CfoI	GCGC	1 cut(s)	1278
Cfr13I	GGNCC	4 cut(s)	205, 317, 349, 2372
Cfr9I	CCCGGG	1 cut(s)	534
ClaI	ATCGAT	1 cut(s)	444
CseI	GACGC	3 cut(s)	193, 1335, 2009
Csp6I	GTAC	8 cut(s)	211, 376, 633, 1161, 1186, 1466, 1559, 2090
CviAII	CATG	6 cut(s)	270, 1133, 1585, 2056, 2441, 2456
CviQI	GTAC	8 cut(s)	211, 376, 633, 1161, 1186, 1466, 1559, 2090
DdeI	CTNAG	5 cut(s)	345, 883, 1453, 2000, 2388
DraI	TTTAAA	1 cut(s)	949
DraIII	CACNNNGTG	1 cut(s)	853
Eam1104I	CTCTTC	4 cut(s)	618, 1365, 1642, 1938
EarI	CTCTTC	4 cut(s)	618, 1365, 1642, 1938
Ecl136II	GAGCTC	1 cut(s)	991
Eco130I	CCWWGG	1 cut(s)	870
Eco24I	GRGCYC	1 cut(s)	993
Eco31I	GGTCTC	1 cut(s)	2057
Eco47I	GGWCC	4 cut(s)	205, 317, 349, 2372
Eco53kI	GAGCTC	1 cut(s)	991
Eco57I	CTGAAG	5 cut(s)	534, 1809, 1962, 1996, 2352
Eco88I	CYCGRG	1 cut(s)	534
EcoICRI	GAGCTC	1 cut(s)	991
EcoNI	CCTNNNNNAGG	2 cut(s)	2046, 2192
EcoO109I	RGGNCCY	3 cut(s)	317, 349, 2372
EcoRI	GAATTC	1 cut(s)	958
EcoRII	CCWGG	2 cut(s)	351, 2374
EcoT14I	CCWWGG	1 cut(s)	870
EcoT22I	ATGCAT	2 cut(s)	1405, 2362
EcoT38I	GRGCYC	1 cut(s)	993
ErhI	CCWWGG	1 cut(s)	870
FaeI	CATG	6 cut(s)	273, 1136, 1588, 2059, 2444, 2459
FalI	AAGNNNNNCTT	8 cut(s)	9, 41, 1371, 1403, 1477, 1509, 1899, 1931
FatI	CATG	6 cut(s)	269, 1132, 1584, 2055, 2440, 2455
FbaI	TGATCA	2 cut(s)	37, 486
FblI	GTMKAC	1 cut(s)	1618
FriOI	GRGCYC	1 cut(s)	993
FspBI	CTAG	4 cut(s)	636, 863, 1511, 2034
FspI	TGCGCA	1 cut(s)	1277
GlaI	GCGC	1 cut(s)	1277
GsaI	CCCAGC	1 cut(s)	774
GsuI	CTGGAG	2 cut(s)	1281, 2222
HaeIII	GGCC	1 cut(s)	1449
HapII	CCGG	2 cut(s)	208, 535
HgaI	GACGC	3 cut(s)	193, 1335, 2009
HhaI	GCGC	1 cut(s)	1278
Hin1II	CATG	6 cut(s)	273, 1136, 1588, 2059, 2444, 2459
Hin6I	GCGC	1 cut(s)	1276
HinP1I	GCGC	1 cut(s)	1276
HincII	GTYRAC	1 cut(s)	1898
HindII	GTYRAC	1 cut(s)	1898
HindIII	AAGCTT	2 cut(s)	952, 1694
HinfI	GANTC	9 cut(s)	835, 881, 1046, 1099, 1412, 1642, 1726, 1740, 1936
HpaII	CCGG	2 cut(s)	208, 535
HphI	GGTGA	4 cut(s)	451, 1421, 1436, 1469
Hpy166II	GTNNAC	6 cut(s)	633, 1619, 1898, 2529, 2540, 2582
Hpy8I	GTNNAC	6 cut(s)	633, 1619, 1898, 2529, 2540, 2582
Hpy99I	CGWCG	1 cut(s)	82
HpyAV	CCTTC	6 cut(s)	67, 308, 967, 1663, 2224, 2376
HpyCH4III	ACNGT	4 cut(s)	52, 89, 1190, 1537
HpyCH4IV	ACGT	3 cut(s)	297, 2135, 2531
HpyF10VI	GCNNNNNNNGC	8 cut(s)	187, 866, 932, 951, 1343, 1729, 2254, 2512
HpyF3I	CTNAG	5 cut(s)	345, 883, 1453, 2000, 2388
HpySE526I	ACGT	3 cut(s)	297, 2135, 2531
Hsp92II	CATG	6 cut(s)	273, 1136, 1588, 2059, 2444, 2459
HspAI	GCGC	1 cut(s)	1276
KpnI	GGTACC	1 cut(s)	1469
Ksp22I	TGATCA	2 cut(s)	37, 486
LguI	GCTCTTC	2 cut(s)	618, 1642
LmnI	GCTCC	6 cut(s)	805, 988, 1300, 2168, 2203, 2493
Lsp1109I	GCAGC	9 cut(s)	174, 568, 751, 779, 892, 1113, 1321, 1369, 2515
LweI	GCATC	8 cut(s)	132, 535, 688, 958, 1017, 1793, 2180, 2347
MaeI	CTAG	4 cut(s)	636, 863, 1511, 2034
MaeII	ACGT	3 cut(s)	297, 2135, 2531
MaeIII	GTNAC	7 cut(s)	355, 414, 1537, 1799, 2026, 2131, 2294
MfeI	CAATTG	4 cut(s)	264, 419, 1815, 2207
MflI	RGATCY	3 cut(s)	1167, 1774, 2378
MhlI	GDGCHC	2 cut(s)	50, 993
MlyI	GAGTC	7 cut(s)	844, 875, 1421, 1651, 1735, 1749, 1930
MmeI	TCCRAC	1 cut(s)	1023
Mph1103I	ATGCAT	2 cut(s)	1405, 2362
MroXI	GAANNNNTTC	2 cut(s)	1155, 2313
MseI	TTAA	9 cut(s)	99, 201, 383, 540, 686, 948, 1826, 1992, 2259
MslI	CAYNNNNRTG	2 cut(s)	1583, 1629
MspA1I	CMGCKG	2 cut(s)	770, 1126
MspI	CCGG	2 cut(s)	208, 535
MspR9I	CCNGG	4 cut(s)	353, 535, 536, 2376
MunI	CAATTG	4 cut(s)	264, 419, 1815, 2207
Mva1269I	GAATGC	3 cut(s)	472, 947, 2360
MvaI	CCWGG	2 cut(s)	353, 2376
MwoI	GCNNNNNNNGC	8 cut(s)	187, 866, 932, 951, 1343, 1729, 2254, 2512
NciI	CCSGG	2 cut(s)	535, 536
NlaIII	CATG	6 cut(s)	273, 1136, 1588, 2059, 2444, 2459
NlaIV	GGNNCC	7 cut(s)	49, 807, 1467, 1490, 1848, 1950, 2380
NmuCI	GTSAC	4 cut(s)	355, 414, 1799, 2294
NsbI	TGCGCA	1 cut(s)	1277
NsiI	ATGCAT	2 cut(s)	1405, 2362
NspI	RCATGY	1 cut(s)	273
NspV	TTCGAA	1 cut(s)	149
PciSI	GCTCTTC	2 cut(s)	618, 1642
PctI	GAATGC	3 cut(s)	472, 947, 2360
PdmI	GAANNNNTTC	2 cut(s)	1155, 2313
PfeI	GAWTC	2 cut(s)	1046, 1099
PflFI	GACNNNGTC	1 cut(s)	1739
PleI	GAGTC	7 cut(s)	843, 875, 1420, 1650, 1734, 1748, 1930
PpsI	GAGTC	7 cut(s)	843, 875, 1420, 1650, 1734, 1748, 1930
PpuMI	RGGWCCY	3 cut(s)	317, 349, 2372
PshBI	ATTAAT	2 cut(s)	1826, 1992
PsiI	TTATAA	2 cut(s)	329, 1919
Psp124BI	GAGCTC	1 cut(s)	993
Psp1406I	AACGTT	1 cut(s)	297
Psp5II	RGGWCCY	3 cut(s)	317, 349, 2372
Psp6I	CCWGG	2 cut(s)	351, 2374
PspFI	CCCAGC	1 cut(s)	770
PspGI	CCWGG	2 cut(s)	351, 2374
PspN4I	GGNNCC	7 cut(s)	49, 807, 1467, 1490, 1848, 1950, 2380
PspPI	GGNCC	4 cut(s)	205, 317, 349, 2372
PspPPI	RGGWCCY	3 cut(s)	317, 349, 2372
PsrI	GAACNNNNNNTAC	2 cut(s)	2413, 2445
PstI	CTGCAG	2 cut(s)	769, 1725
PstNI	CAGNNNCTG	4 cut(s)	187, 352, 1729, 2375
PsuI	RGATCY	3 cut(s)	1167, 1774, 2378
PsyI	GACNNNGTC	1 cut(s)	1739
PvuII	CAGCTG	2 cut(s)	770, 1126
RsaI	GTAC	8 cut(s)	212, 377, 634, 1162, 1187, 1467, 1560, 2091
RsaNI	GTAC	8 cut(s)	211, 376, 633, 1161, 1186, 1466, 1559, 2090
RseI	CAYNNNNRTG	2 cut(s)	1583, 1629
SacI	GAGCTC	1 cut(s)	993
SapI	GCTCTTC	2 cut(s)	618, 1642
SaqAI	TTAA	9 cut(s)	99, 201, 383, 540, 686, 948, 1826, 1992, 2259
Sau96I	GGNCC	4 cut(s)	205, 317, 349, 2372
ScaI	AGTACT	1 cut(s)	2091
SchI	GAGTC	7 cut(s)	844, 875, 1421, 1651, 1735, 1749, 1930
ScrFI	CCNGG	4 cut(s)	353, 535, 536, 2376
SduI	GDGCHC	2 cut(s)	50, 993
SfaNI	GCATC	8 cut(s)	132, 535, 688, 958, 1017, 1793, 2180, 2347
SfcI	CTRYAG	2 cut(s)	765, 1721
SfuI	TTCGAA	1 cut(s)	149
SinI	GGWCC	4 cut(s)	205, 317, 349, 2372
SmaI	CCCGGG	1 cut(s)	536
SmiMI	CAYNNNNRTG	2 cut(s)	1583, 1629
SmlI	CTYRAG	1 cut(s)	11
SmoI	CTYRAG	1 cut(s)	11
SpeI	ACTAGT	3 cut(s)	635, 862, 2033
SsiI	CCGC	3 cut(s)	809, 926, 1171
SspI	AATATT	2 cut(s)	1717, 1969
SspMI	CTAG	4 cut(s)	636, 863, 1511, 2034
SstI	GAGCTC	1 cut(s)	993
StyD4I	CCNGG	4 cut(s)	351, 533, 534, 2374
StyI	CCWWGG	1 cut(s)	870
TaaI	ACNGT	4 cut(s)	52, 89, 1190, 1537
TaiI	ACGT	3 cut(s)	300, 2138, 2534
TaqI	TCGA	4 cut(s)	149, 372, 444, 1645
TatI	WGTACW	3 cut(s)	632, 1558, 2089
TauI	GCSGC	1 cut(s)	811
TfiI	GAWTC	2 cut(s)	1046, 1099
Tru1I	TTAA	9 cut(s)	99, 201, 383, 540, 686, 948, 1826, 1992, 2259
Tru9I	TTAA	9 cut(s)	99, 201, 383, 540, 686, 948, 1826, 1992, 2259
TscAI	CASTG	6 cut(s)	531, 566, 792, 1450, 2020, 2205
TseFI	GTSAC	4 cut(s)	355, 414, 1799, 2294
TseI	GCWGC	9 cut(s)	187, 556, 764, 767, 905, 1126, 1334, 1382, 2503
Tsp45I	GTSAC	4 cut(s)	355, 414, 1799, 2294
TspGWI	ACGGA	3 cut(s)	95, 1003, 2164
TspMI	CCCGGG	1 cut(s)	534
TspRI	CASTG	6 cut(s)	531, 566, 792, 1450, 2020, 2205
Tth111I	GACNNNGTC	1 cut(s)	1739
VpaK11BI	GGWCC	4 cut(s)	205, 317, 349, 2372
VspI	ATTAAT	2 cut(s)	1826, 1992
XagI	CCTNNNNNAGG	2 cut(s)	2046, 2192
XapI	RAATTY	2 cut(s)	151, 958
XceI	RCATGY	1 cut(s)	273
XmaI	CCCGGG	1 cut(s)	534
XmiI	GTMKAC	1 cut(s)	1618
XmnI	GAANNNNTTC	2 cut(s)	1155, 2313
XspI	CTAG	4 cut(s)	636, 863, 1511, 2034
ZrmI	AGTACT	1 cut(s)	2091
Zsp2I	ATGCAT	2 cut(s)	1405, 2362

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.