Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr17

Orthogroup ID

OG0005044

Physical Location & Seq

Genomic Coordinates Reverse (-)

16739149 .. 16747240

Gene Structure 8092 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD17G1167700.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2970 bp

ATGGATGATCTCGAAAAAGCAGTACTTATATTGTTTGATGAGTCGGGCACCGTTGATTCCGAGCTGAAACAGAAGGCAAAAGATTACTGTGATAAAATTAAGGAAGAACAGGCGATATGTAGTGTCTGTATTGAGAGGTTGTGCTTTTCGAATTTAGTTCAAGTTCAGTTTTGGTGCTTACAGGCTCTGCATGAGGTTATTAGAGTCCGGTACTCGTCGACGAGTCTAGATGAGAAGTTTTTTATCAGGAAGTCGGTGTTTTCGATTGCATGTCTTGGTGGGTTTGATGATAAGAGTACTGTTAGGGTTTTAGAAGGTCCTGCATTTATAAAGAATAAACTTGCTCAGGTTTTGGTGACTTTGATTTACTATGAGTACCCATTGATTTGGTCGTCGGTGTTTGTTGATTTTTTGTCACAACTGAATAAAGGGGCAGTGTTGATTGATATGTTCTGCCGGGTTTTGAATGCTTTGGATGAGGAAGTGATTAATTTGGACTACCCTCGGACACCGGAGGAACTATCAGTGGCAGCGGGGATTAAGGATGCTATGAGGCAGCAGTGTGTAGCACAAATAGTTAGAGCCTGGTACGAGATTGTGTCTATGTATAGGAAGTCTGATGAAGAGCTTTGTGCTAGTGTATTAGAATCAATGAGGAGGTTTATCTCTTGGATTGATATTGGTTTAATTGTGAATGATGCCTTTATCCCGTTATTGTTTGAGTTGGTTTTGGTTGATGGGCTCTCTGAACAACTCCGTAGTGCTGCAGCTGGATGTTTGTCAGCAGTAGTATTGAAAAGGATGGATCCACAGGCAAAACTACCGCTTTTGCAAAGTCTTCAAATGCATCGGGTTTTTGGACTAGTAGCTCAGGATAATGACTCAGAGTTGGTATCTAATATAGCTGCATTGCTTACTGGGTATGCGGTTGAGGTTCTTGAGTGCTTTAAACGGTTGAATTCTGAGGATGCCAAGGGTATTTCAATGGAGCTCTTGAATGAAGTTTTGCCCTCTGTATTTTATGTCATGCAGAACTGTGAGTTGGACTCGGCATTTAGCATTGTGCAATTTCTTTCAGGTTATGTTGGCACAATGAAGACTCTTTCCTCATTGAGGGAAACACAGGTGGGTCATGTAGGTCAGATTTTGGAAGTGATCCATTCACAGATCCGCTATGATCCTATGTACCGTGAAAATCTAGATATATTGGATAAAATTGGAAAAGAGGAGGAAGATAGGATGGTGGAGTTTAGAAAGGATTTGTTTATGCTGCTGCGTAATGTAGGTCGTGTAGCACCTGATGTCACTCAGATATTTATTAGAAACTCATTGGCTACTGCTGTTGGATCATCCTTAGACTGGAATGTTGAAGAGGTGGAAGTTGCACTTTCTCTTTTCTATGCATTTGGCGAGTCAATAAATGGTGAGGCAATTAGAACTGGGAGTGGTCTATTGGGTGAATTGGTACCAATGCTTTTATCTACAAGGTTCCTTTGCCATTCAAATAGGCTAGTTGCACTGGTGTATCTAGAGACAGTAATGAGATACATGAAGTTTGTTCAGGAGAATACCCAATATATTCACTTGGTTTTGGCTGCCTTTCTTGATGAAAGGGGTATACGCCATCCAAATGTCAATGTGAGTAGAAGGGCGGGTTATGTGTTTATGAGGGTTGTGAAATTGCTGAGAGTGAAGCTTGTGCCTTTCATAGAAAATATTTTGCAGAATTTACAAGATACAGTTGCTGGGTTTACAAGAATGGATTATACATCAAAAGAGCTTTCAGGATCTGAAGATGGTAGTCACATTTTTGAGGCAATTGGTTTATTGATTGGCATGGAAGATGTACCACCAGCAAAGCAGTCTGATTATCTCTCTTCACTTCTCACTCCTCTTTGTCAGCAGGTTGAAGCATTGCTCATGAATGCCAAAGTACTGACTCCAGAAGAGGCACCTCAAAAATTTGCTAATATTAAGCAGATAATTGTGGCAATTAATTCTCTTAGCAAGGGCTTCAGCGAGCGTCTTGTGACTGCTAGTCGCCCTGCACTTGGTCTCATGTTCACGGAGACATTAGATGTTCTTCTTCAAGTACTAGTGGTGTTTCCTAATGTAGAGACTTTGCGCAGTAAGGTAACATCATTTGTACACCGCATGGTGGACACTCTAGGAGCATCTGTTTTTCCTTACCTCCCAAAGGCACTGGAGCACTTGCTTGTGGATAGTGAGCCAAAGGAATTGGTTGGTTTGCTTCTATTGCTCAATCAACTGATATGCAAGTTCAACACATTATTCCGTGACATACTGGATGAAGTATTTCCTGCTATAACTGGTAGGATATTAAATATTATTCCGGTAGACACACTCCCTTCAGGACCTGGATTCAATACTGAGGAAAATCGGGAATTGCAAGAACTTCAGCGAACATTATATACATTTCTTCATGTGATAACTACACATGATCTATCTTCTGTATTCCTATCCCCCAAGAGTAGGATCTACTTAGAACCAATTATGCAGTTGCTGTTGTTCACGTCTTGTAAGCACAAGGATATTCTTGTAAGGAAGGCATGCGTACAGATATTTATTAGGCTGATTAAGGATTGGTGCGCGATGCCTAATGGCGAAGAAAAGGTACCTGGTTTCCAGAGTTTTATAATAGAGACCTTTGCTACGAACTGTTGTTTGTACAGCCTGCTGGACACCTCTTTCGAATTTCGTGATGCAAATACTCTCGTTTTGTTTGGAGAAATTGTACTGGCTCAGAAGGTTATGTTTGAAAAGTTTGGCAATGATTTTCTAGCTCACTTTGTCTCAAAGGGTTTTCCAGCAGCACATTGCCCCCAAGATTTGGCTGAGAAATATTGCCAGCAGCTGCAGGGTAGTGATATAAAGGCTTTGAAGTCATTCTACCAGTCACTTATCGAAAGTTTGAGACGTCAGCAGAATGGGAGCCTTGTTGTCAGATAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0000049 GO:0003006 GO:0003674 GO:0003676 GO:0003723 GO:0005049 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005635 GO:0005643 GO:0005737 GO:0005829 GO:0006403 GO:0006405 GO:0006409 GO:0006611 GO:0006810 GO:0006886 GO:0006913 GO:0007275 GO:0008104 GO:0008150 GO:0008536 GO:0009653 GO:0009791 GO:0009888 GO:0009908 GO:0009933 GO:0010014 GO:0012505 GO:0015031 GO:0015833 GO:0015931 GO:0016363 GO:0017016 GO:0019899 GO:0022414 GO:0031267 GO:0031503 GO:0031967 GO:0031974 GO:0031975 GO:0031981 GO:0032501 GO:0032502 GO:0032991 GO:0033036 GO:0034399 GO:0034613 GO:0042886 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0044422 GO:0044424 GO:0044428 GO:0044444 GO:0044446 GO:0044464 GO:0045184 GO:0046907 GO:0048367 GO:0048507 GO:0048532 GO:0048608 GO:0048731 GO:0048856 GO:0050657 GO:0050658 GO:0051020 GO:0051031 GO:0051168 GO:0051169 GO:0051179 GO:0051234 GO:0051236 GO:0051641 GO:0051649 GO:0061458 GO:0070013 GO:0070727 GO:0071166 GO:0071426 GO:0071431 GO:0071528 GO:0071702 GO:0071705 GO:0090567 GO:0097064 GO:0097159 GO:0140104 GO:0140142 GO:1901363

KEGG Pathways

Metabolic & Signaling

ko03013 map03013

Pfam Domains

Protein Families

Xpo1

Protein Analysis

990

Amino Acids

111.76

Weight (kDa)

5.29

Isoelectric Point (pI)

41.9

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Xpo1	PF08389	107 - 260	3.4e-37	Exportin 1-like protein
Exportin-T	PF19282	328 - 977	2.9e-86	Exportin-T

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

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Orthologous Genes (Group: OG0005044)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G72560 AT1G72560 AT1G72560 AT1G72560 AT1G72560 AT1G72560 AT1G72560
fragaria_vesca	FvH4_6g34890 FvH4_6g34890 FvH4_6g34890 FvH4_6g34890 FvH4_6g34890 FvH4_6g34890 FvH4_6g34890
malus_domestica	MD09G1181500.v1.1 MD17G1167700.v1.1
prunus_persica	Prupe.3G039600_v2.0.a1 Prupe.3G039600_v2.0.a1 Prupe.3G039600_v2.0.a1
pyrus_communis	pycom09g09910 pycom17g15940
rosa_chinensis	RchiOBHm_Chr2g0145781
rosa_laevigata	RLG00000020167
rosa_multiflora	Rmu_sc0000473.1_g000003
rosa_roxburghii	Rroxscaffold_152G00434750 Rroxscaffold_2G00100450
rosa_rugosa	Rorug02G0393200
rosa_samantha	Rh2BG459800 Rh2CG434400
rosa_wichuraiana	Rw2G036570

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	2 cut(s)	329, 2657
AatII	GACGTC	1 cut(s)	2941
Acc16I	TGCGCA	1 cut(s)	2126
Acc36I	ACCTGC	1 cut(s)	1894
Acc65I	GGTACC	2 cut(s)	1465, 2635
AccB1I	GGYRCC	4 cut(s)	47, 1465, 1951, 2635
AccB7I	CCANNNNNTGG	1 cut(s)	2851
AccI	GTMKAC	3 cut(s)	218, 1618, 2358
AccII	CGCG	1 cut(s)	2612
AciI	CCGC	6 cut(s)	533, 824, 926, 1171, 1652, 2152
AclWI	GGATC	8 cut(s)	800, 813, 1150, 1162, 1172, 1354, 1795, 2504
AcsI	RAATTY	5 cut(s)	151, 958, 1726, 1961, 2714
AcuI	CTGAAG	4 cut(s)	1812, 1999, 2355, 2402
AcyI	GRCGYC	1 cut(s)	2938
AfiI	CCNNNNNNNGG	7 cut(s)	1113, 1359, 2051, 2158, 2197, 2493, 2851
AhdI	GACNNNNNGTC	1 cut(s)	2037
AhlI	ACTAGT	2 cut(s)	862, 2095
AjiI	CACGTC	1 cut(s)	2535
AjnI	CCWGG	3 cut(s)	584, 2377, 2638
AjuI	GAANNNNNNNTTGG	2 cut(s)	1025, 1057
Alw21I	GWGCWC	2 cut(s)	993, 2211
Alw26I	GTCTC	7 cut(s)	1526, 2060, 2063, 2111, 2657, 2818, 2929
AlwI	GGATC	8 cut(s)	800, 813, 1150, 1162, 1172, 1354, 1795, 2504
AlwNI	CAGNNNCTG	6 cut(s)	187, 1745, 1790, 2378, 2524, 2875
ApoI	RAATTY	5 cut(s)	151, 958, 1726, 1961, 2714
ArsI	GACNNNNNNTTYG	2 cut(s)	2693, 2725
AseI	ATTAAT	2 cut(s)	489, 1995
Asp700I	GAANNNNTTC	2 cut(s)	2316, 2906
Asp718I	GGTACC	2 cut(s)	1465, 2635
AspLEI	GCGC	2 cut(s)	2127, 2612
AspS9I	GGNCC	2 cut(s)	317, 2375
AsuC2I	CCSGG	1 cut(s)	458
AsuHPI	GGTGA	3 cut(s)	367, 1436, 1469
AsuII	TTCGAA	2 cut(s)	149, 2712
AvaII	GGWCC	2 cut(s)	317, 2375
BaeGI	GKGCMC	1 cut(s)	50
BaeI	ACNNNNGTAYC	2 cut(s)	1508, 1541
BamHI	GGATCC	1 cut(s)	805
BanI	GGYRCC	4 cut(s)	47, 1465, 1951, 2635
BanII	GRGCYC	2 cut(s)	744, 993
BarI	GAAGNNNNNNTAC	4 cut(s)	2619, 2651, 2894, 2926
BbsI	GAAGAC	2 cut(s)	830, 1103
Bbv12I	GWGCWC	2 cut(s)	993, 2211
BccI	CCATC	5 cut(s)	731, 796, 1234, 1632, 1790
BciT130I	CCWGG	3 cut(s)	586, 2379, 2640
BcnI	CCSGG	1 cut(s)	458
BcoDI	GTCTC	7 cut(s)	1526, 2060, 2063, 2111, 2657, 2818, 2929
BcuI	ACTAGT	2 cut(s)	862, 2095
BfmI	CTRYAG	2 cut(s)	765, 2876
BfuAI	ACCTGC	1 cut(s)	1894
BmcAI	AGTACT	4 cut(s)	24, 298, 1935, 2094
Bme1390I	CCNGG	4 cut(s)	458, 586, 2379, 2640
Bme18I	GGWCC	2 cut(s)	317, 2375
BmeRI	GACNNNNNGTC	1 cut(s)	2037
BmgBI	CACGTC	1 cut(s)	2535
BmgT120I	GGNCC	2 cut(s)	317, 2375
BmiI	GGNNCC	7 cut(s)	49, 807, 1467, 1490, 1953, 2637, 2954
BmrFI	CCNGG	4 cut(s)	458, 586, 2379, 2640
BmrI	ACTGGG	2 cut(s)	927, 1449
BmsI	GCATC	7 cut(s)	535, 688, 856, 958, 2183, 2604, 2713
BmuI	ACTGGG	2 cut(s)	927, 1449
BpiI	GAAGAC	2 cut(s)	830, 1103
BplI	GAGNNNNNCTC	2 cut(s)	1031, 1063
BpmI	CTGGAG	2 cut(s)	1926, 2225
Bpu10I	CCTNAGC	2 cut(s)	345, 870
Bpu14I	TTCGAA	2 cut(s)	149, 2712
BpuEI	CTTGAG	1 cut(s)	959
BpuMI	CCSGG	1 cut(s)	458
BsaHI	GRCGYC	1 cut(s)	2938
BsaI	GGTCTC	2 cut(s)	2060, 2657
BsaJI	CCNNGG	2 cut(s)	503, 972
BsaWI	WCCGGW	3 cut(s)	207, 511, 2353
BsaXI	ACNNNNNCTCC	4 cut(s)	2163, 2193, 2739, 2769
Bsc4I	CCNNNNNNNGG	7 cut(s)	1113, 1359, 2051, 2158, 2197, 2493, 2851
Bse1I	ACTGG	9 cut(s)	922, 1364, 1444, 1524, 2208, 2310, 2335, 2763, 2914
Bse3DI	GCAATG	4 cut(s)	908, 1913, 2797, 2836
BseBI	CCWGG	3 cut(s)	586, 2379, 2640
BseDI	CCNNGG	2 cut(s)	503, 972
BseLI	CCNNNNNNNGG	7 cut(s)	1113, 1359, 2051, 2158, 2197, 2493, 2851
BseMI	GCAATG	4 cut(s)	908, 1913, 2797, 2836
BseMII	CTCAG	9 cut(s)	359, 884, 897, 954, 1322, 1676, 2382, 2777, 2847
BseNI	ACTGG	9 cut(s)	922, 1364, 1444, 1524, 2208, 2310, 2335, 2763, 2914
BseRI	GAGGAG	3 cut(s)	670, 1241, 1881
BseSI	GKGCMC	1 cut(s)	50
BseYI	CCCAGC	1 cut(s)	1745
BsgI	GTGCAG	1 cut(s)	2031
Bsh1236I	CGCG	1 cut(s)	2612
BshNI	GGYRCC	4 cut(s)	47, 1465, 1951, 2635
BsiHKAI	GWGCWC	2 cut(s)	993, 2211
BsiSI	CCGG	4 cut(s)	208, 457, 512, 2354
BslI	CCNNNNNNNGG	7 cut(s)	1113, 1359, 2051, 2158, 2197, 2493, 2851
BsmAI	GTCTC	7 cut(s)	1526, 2060, 2063, 2111, 2657, 2818, 2929
BsmBI	CGTCTC	1 cut(s)	2929
BsmI	GAATGC	2 cut(s)	472, 1930
Bso31I	GGTCTC	2 cut(s)	2060, 2657
Bsp119I	TTCGAA	2 cut(s)	149, 2712
Bsp1286I	GDGCHC	4 cut(s)	50, 744, 993, 2211
Bsp1407I	TGTACA	2 cut(s)	2146, 2688
Bsp143I	GATC	9 cut(s)	7, 805, 1155, 1167, 1177, 1346, 1787, 2461, 2496
BspACI	CCGC	6 cut(s)	533, 824, 926, 1171, 1652, 2152
BspCNI	CTCAG	9 cut(s)	358, 883, 896, 955, 1321, 1677, 2383, 2776, 2848
BspFNI	CGCG	1 cut(s)	2612
BspHI	TCATGA	1 cut(s)	1920
BspLI	GGNNCC	7 cut(s)	49, 807, 1467, 1490, 1953, 2637, 2954
BspMAI	CTGCAG	2 cut(s)	769, 2880
BspMI	ACCTGC	1 cut(s)	1894
BspPI	GGATC	8 cut(s)	800, 813, 1150, 1162, 1172, 1354, 1795, 2504
BspQI	GCTCTTC	1 cut(s)	618
BspT104I	TTCGAA	2 cut(s)	149, 2712
BspT107I	GGYRCC	4 cut(s)	47, 1465, 1951, 2635
BspTNI	GGTCTC	2 cut(s)	2060, 2657
BsrDI	GCAATG	4 cut(s)	908, 1913, 2797, 2836
BsrGI	TGTACA	2 cut(s)	2146, 2688
BsrI	ACTGG	9 cut(s)	922, 1364, 1444, 1524, 2208, 2310, 2335, 2763, 2914
BssECI	CCNNGG	2 cut(s)	503, 972
BssMI	GATC	9 cut(s)	7, 805, 1155, 1167, 1177, 1346, 1787, 2461, 2496
BssNAI	GTATAC	1 cut(s)	1619
BssNI	GRCGYC	1 cut(s)	2938
BssT1I	CCWWGG	1 cut(s)	972
Bst1107I	GTATAC	1 cut(s)	1619
Bst2UI	CCWGG	3 cut(s)	586, 2379, 2640
Bst4CI	ACNGT	9 cut(s)	52, 89, 301, 954, 1037, 1190, 1537, 1741, 2681
Bst6I	CTCTTC	4 cut(s)	618, 1365, 1882, 1941
BstACI	GRCGYC	1 cut(s)	2938
BstAUI	TGTACA	2 cut(s)	2146, 2688
BstBI	TTCGAA	2 cut(s)	149, 2712
BstC8I	GCNNGC	4 cut(s)	2021, 2572, 2696, 2870
BstENI	CCTNNNNNAGG	2 cut(s)	1111, 2195
BstFNI	CGCG	1 cut(s)	2612
BstHHI	GCGC	2 cut(s)	2127, 2612
BstKTI	GATC	9 cut(s)	10, 808, 1158, 1170, 1180, 1349, 1790, 2464, 2499
BstMAI	GTCTC	7 cut(s)	1526, 2060, 2063, 2111, 2657, 2818, 2929
BstMBI	GATC	9 cut(s)	7, 805, 1155, 1167, 1177, 1346, 1787, 2461, 2496
BstMWI	GCNNNNNNNGC	1 cut(s)	2257
BstNI	CCWGG	3 cut(s)	586, 2379, 2640
BstNSI	RCATGY	2 cut(s)	273, 2574
BstSCI	CCNGG	4 cut(s)	456, 584, 2377, 2638
BstSFI	CTRYAG	2 cut(s)	765, 2876
BstSLI	GKGCMC	1 cut(s)	50
BstUI	CGCG	1 cut(s)	2612
BstV2I	GAAGAC	2 cut(s)	830, 1103
BstX2I	RGATCY	4 cut(s)	805, 1167, 1787, 2496
BstXI	CCANNNNNNTGG	1 cut(s)	387
BstYI	RGATCY	4 cut(s)	805, 1167, 1787, 2496
BstZ17I	GTATAC	1 cut(s)	1619
BtgZI	GCGATG	1 cut(s)	2627
BtrI	CACGTC	1 cut(s)	2535
BtsI	GCAGTG	2 cut(s)	441, 566
BtsIMutI	CAGTG	5 cut(s)	441, 531, 566, 1517, 2201
BveI	ACCTGC	1 cut(s)	1894
Cac8I	GCNNGC	4 cut(s)	2021, 2572, 2696, 2870
CaiI	CAGNNNCTG	6 cut(s)	187, 1745, 1790, 2378, 2524, 2875
CciI	TCATGA	1 cut(s)	1920
CfoI	GCGC	2 cut(s)	2127, 2612
Cfr13I	GGNCC	2 cut(s)	317, 2375
CseI	GACGC	1 cut(s)	2012
CsiI	ACCWGGT	1 cut(s)	2638
DpnI	GATC	9 cut(s)	9, 807, 1157, 1169, 1179, 1348, 1789, 2463, 2498
DpnII	GATC	9 cut(s)	7, 805, 1155, 1167, 1177, 1346, 1787, 2461, 2496
DraI	TTTAAA	1 cut(s)	949
DriI	GACNNNNNGTC	1 cut(s)	2037
Eam1104I	CTCTTC	4 cut(s)	618, 1365, 1882, 1941
Eam1105I	GACNNNNNGTC	1 cut(s)	2037
EarI	CTCTTC	4 cut(s)	618, 1365, 1882, 1941
Ecl136II	GAGCTC	1 cut(s)	991
Eco130I	CCWWGG	1 cut(s)	972
Eco24I	GRGCYC	2 cut(s)	744, 993
Eco31I	GGTCTC	2 cut(s)	2060, 2657
Eco47I	GGWCC	2 cut(s)	317, 2375
Eco53kI	GAGCTC	1 cut(s)	991
Eco57I	CTGAAG	4 cut(s)	1812, 1999, 2355, 2402
EcoICRI	GAGCTC	1 cut(s)	991
EcoNI	CCTNNNNNAGG	2 cut(s)	1111, 2195
EcoO109I	RGGNCCY	2 cut(s)	317, 2375
EcoRI	GAATTC	1 cut(s)	958
EcoRII	CCWGG	3 cut(s)	584, 2377, 2638
EcoT14I	CCWWGG	1 cut(s)	972
EcoT22I	ATGCAT	2 cut(s)	849, 1405
EcoT38I	GRGCYC	2 cut(s)	744, 993
ErhI	CCWWGG	1 cut(s)	972
Esp3I	CGTCTC	1 cut(s)	2929
FalI	AAGNNNNNCTT	4 cut(s)	9, 41, 1371, 1403
FauI	CCCGC	2 cut(s)	526, 1645
FblI	GTMKAC	3 cut(s)	218, 1618, 2358
FriOI	GRGCYC	2 cut(s)	744, 993
FspI	TGCGCA	1 cut(s)	2126
GlaI	GCGC	2 cut(s)	2126, 2611
GsaI	CCCAGC	1 cut(s)	1749
GsuI	CTGGAG	2 cut(s)	1926, 2225
HapII	CCGG	4 cut(s)	208, 457, 512, 2354
HgaI	GACGC	1 cut(s)	2012
HhaI	GCGC	2 cut(s)	2127, 2612
Hin1I	GRCGYC	1 cut(s)	2938
Hin6I	GCGC	2 cut(s)	2125, 2610
HinP1I	GCGC	2 cut(s)	2125, 2610
HincII	GTYRAC	1 cut(s)	219
HindII	GTYRAC	1 cut(s)	219
HindIII	AAGCTT	1 cut(s)	1694
HpaII	CCGG	4 cut(s)	208, 457, 512, 2354
HphI	GGTGA	3 cut(s)	367, 1436, 1469
Hpy166II	GTNNAC	8 cut(s)	219, 1619, 1752, 2064, 2149, 2161, 2359, 2532
Hpy8I	GTNNAC	8 cut(s)	219, 1619, 1752, 2064, 2149, 2161, 2359, 2532
Hpy99I	CGWCG	3 cut(s)	220, 223, 397
HpyAV	CCTTC	6 cut(s)	67, 308, 1641, 2379, 2560, 2761
HpyCH4III	ACNGT	9 cut(s)	52, 89, 301, 954, 1037, 1190, 1537, 1741, 2681
HpyCH4IV	ACGT	2 cut(s)	2534, 2938
HpyF10VI	GCNNNNNNNGC	1 cut(s)	2257
HpySE526I	ACGT	2 cut(s)	2534, 2938
Hsp92I	GRCGYC	1 cut(s)	2938
HspAI	GCGC	2 cut(s)	2125, 2610
KpnI	GGTACC	2 cut(s)	1469, 2639
Kzo9I	GATC	9 cut(s)	7, 805, 1155, 1167, 1177, 1346, 1787, 2461, 2496
LguI	GCTCTTC	1 cut(s)	618
LmnI	GCTCC	4 cut(s)	988, 2171, 2206, 2952
LweI	GCATC	7 cut(s)	535, 688, 856, 958, 2183, 2604, 2713
MabI	ACCWGGT	1 cut(s)	2638
MaeII	ACGT	2 cut(s)	2534, 2938
MaeIII	GTNAC	8 cut(s)	355, 414, 1303, 1802, 2029, 2134, 2297, 2916
MalI	GATC	9 cut(s)	9, 807, 1157, 1169, 1179, 1348, 1789, 2463, 2498
MboI	GATC	9 cut(s)	7, 805, 1155, 1167, 1177, 1346, 1787, 2461, 2496
MfeI	CAATTG	1 cut(s)	1818
MflI	RGATCY	4 cut(s)	805, 1167, 1787, 2496
MhlI	GDGCHC	4 cut(s)	50, 744, 993, 2211
MlyI	GAGTC	8 cut(s)	50, 213, 232, 875, 1040, 1093, 1421, 1933
MmeI	TCCRAC	2 cut(s)	1023, 1324
Mph1103I	ATGCAT	2 cut(s)	849, 1405
MroXI	GAANNNNTTC	2 cut(s)	2316, 2906
MseI	TTAA	9 cut(s)	99, 489, 540, 686, 948, 1974, 1995, 2342, 2598
MslI	CAYNNNNRTG	1 cut(s)	1629
MspA1I	CMGCKG	3 cut(s)	533, 770, 2875
MspI	CCGG	4 cut(s)	208, 457, 512, 2354
MspR9I	CCNGG	4 cut(s)	458, 586, 2379, 2640
MunI	CAATTG	1 cut(s)	1818
Mva1269I	GAATGC	2 cut(s)	472, 1930
MvaI	CCWGG	3 cut(s)	586, 2379, 2640
MvnI	CGCG	1 cut(s)	2612
MwoI	GCNNNNNNNGC	1 cut(s)	2257
NciI	CCSGG	1 cut(s)	458
NdeII	GATC	9 cut(s)	7, 805, 1155, 1167, 1177, 1346, 1787, 2461, 2496
NlaIV	GGNNCC	7 cut(s)	49, 807, 1467, 1490, 1953, 2637, 2954
NmeAIII	GCCGAG	1 cut(s)	1028
NmuCI	GTSAC	7 cut(s)	355, 414, 1303, 1802, 2029, 2297, 2916
NsbI	TGCGCA	1 cut(s)	2126
NsiI	ATGCAT	2 cut(s)	849, 1405
NspI	RCATGY	2 cut(s)	273, 2574
NspV	TTCGAA	2 cut(s)	149, 2712
PaeI	GCATGC	1 cut(s)	2574
PagI	TCATGA	1 cut(s)	1920
PciSI	GCTCTTC	1 cut(s)	618
PcsI	WCGNNNNNNNCGW	1 cut(s)	260
PctI	GAATGC	2 cut(s)	472, 1930
PdmI	GAANNNNTTC	2 cut(s)	2316, 2906
PfeI	GAWTC	3 cut(s)	56, 647, 2382
PflMI	CCANNNNNTGG	1 cut(s)	2851
PleI	GAGTC	8 cut(s)	49, 212, 231, 875, 1040, 1093, 1420, 1933
PpsI	GAGTC	8 cut(s)	49, 212, 231, 875, 1040, 1093, 1420, 1933
PpuMI	RGGWCCY	2 cut(s)	317, 2375
PshBI	ATTAAT	2 cut(s)	489, 1995
PsiI	TTATAA	2 cut(s)	329, 2657
Psp124BI	GAGCTC	1 cut(s)	993
Psp5II	RGGWCCY	2 cut(s)	317, 2375
Psp6I	CCWGG	3 cut(s)	584, 2377, 2638
PspFI	CCCAGC	1 cut(s)	1745
PspGI	CCWGG	3 cut(s)	584, 2377, 2638
PspN4I	GGNNCC	7 cut(s)	49, 807, 1467, 1490, 1953, 2637, 2954
PspPI	GGNCC	2 cut(s)	317, 2375
PspPPI	RGGWCCY	2 cut(s)	317, 2375
PsrI	GAACNNNNNNTAC	2 cut(s)	2416, 2448
PstI	CTGCAG	2 cut(s)	769, 2880
PstNI	CAGNNNCTG	6 cut(s)	187, 1745, 1790, 2378, 2524, 2875
PsuI	RGATCY	4 cut(s)	805, 1167, 1787, 2496
PvuII	CAGCTG	2 cut(s)	770, 2875
RseI	CAYNNNNRTG	1 cut(s)	1629
SacI	GAGCTC	1 cut(s)	993
SalI	GTCGAC	1 cut(s)	217
SapI	GCTCTTC	1 cut(s)	618
SaqAI	TTAA	9 cut(s)	99, 489, 540, 686, 948, 1974, 1995, 2342, 2598
Sau3AI	GATC	9 cut(s)	7, 805, 1155, 1167, 1177, 1346, 1787, 2461, 2496
Sau96I	GGNCC	2 cut(s)	317, 2375
ScaI	AGTACT	4 cut(s)	24, 298, 1935, 2094
SchI	GAGTC	8 cut(s)	50, 213, 232, 875, 1040, 1093, 1421, 1933
ScrFI	CCNGG	4 cut(s)	458, 586, 2379, 2640
SduI	GDGCHC	4 cut(s)	50, 744, 993, 2211
SexAI	ACCWGGT	1 cut(s)	2638
SfaNI	GCATC	7 cut(s)	535, 688, 856, 958, 2183, 2604, 2713
SfcI	CTRYAG	2 cut(s)	765, 2876
SfuI	TTCGAA	2 cut(s)	149, 2712
SgrDI	CGTCGACG	1 cut(s)	217
SinI	GGWCC	2 cut(s)	317, 2375
SmiMI	CAYNNNNRTG	1 cut(s)	1629
SmlI	CTYRAG	1 cut(s)	938
SmoI	CTYRAG	1 cut(s)	938
SpeI	ACTAGT	2 cut(s)	862, 2095
SphI	GCATGC	1 cut(s)	2574
SsiI	CCGC	6 cut(s)	533, 824, 926, 1171, 1652, 2152
SspI	AATATT	4 cut(s)	1717, 1972, 2347, 2864
SstI	GAGCTC	1 cut(s)	993
StyD4I	CCNGG	4 cut(s)	456, 584, 2377, 2638
StyI	CCWWGG	1 cut(s)	972
TaaI	ACNGT	9 cut(s)	52, 89, 301, 954, 1037, 1190, 1537, 1741, 2681
TaiI	ACGT	2 cut(s)	2537, 2941
TaqI	TCGA	6 cut(s)	12, 149, 218, 263, 2712, 2925
TatI	WGTACW	7 cut(s)	22, 296, 1933, 2092, 2146, 2688, 2755
TfiI	GAWTC	3 cut(s)	56, 647, 2382
Tru1I	TTAA	9 cut(s)	99, 489, 540, 686, 948, 1974, 1995, 2342, 2598
Tru9I	TTAA	9 cut(s)	99, 489, 540, 686, 948, 1974, 1995, 2342, 2598
TscAI	CASTG	5 cut(s)	441, 531, 566, 1524, 2208
TseFI	GTSAC	7 cut(s)	355, 414, 1303, 1802, 2029, 2297, 2916
Tsp45I	GTSAC	7 cut(s)	355, 414, 1303, 1802, 2029, 2297, 2916
TspDTI	ATGAA	9 cut(s)	636, 1014, 1109, 1565, 1623, 1696, 1937, 2325, 2432
TspGWI	ACGGA	3 cut(s)	746, 2081, 2285
TspRI	CASTG	5 cut(s)	441, 531, 566, 1524, 2208
Van91I	CCANNNNNTGG	1 cut(s)	2851
VpaK11BI	GGWCC	2 cut(s)	317, 2375
VspI	ATTAAT	2 cut(s)	489, 1995
XagI	CCTNNNNNAGG	2 cut(s)	1111, 2195
XapI	RAATTY	5 cut(s)	151, 958, 1726, 1961, 2714
XbaI	TCTAGA	3 cut(s)	226, 1198, 1528
XceI	RCATGY	2 cut(s)	273, 2574
XmiI	GTMKAC	3 cut(s)	218, 1618, 2358
XmnI	GAANNNNTTC	2 cut(s)	2316, 2906
ZraI	GACGTC	1 cut(s)	2939
ZrmI	AGTACT	4 cut(s)	24, 298, 1935, 2094
Zsp2I	ATGCAT	2 cut(s)	849, 1405

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.