Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr17

Orthogroup ID

OG0005044

Physical Location & Seq

Genomic Coordinates Reverse (-)

14244378 .. 14249425

Gene Structure 5048 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom17g15940.3

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2514 bp

ATGTGGTTTTTGGGTCCATGGATCGATCTCGAAAAAGCAGTACTTATATTGTTTGATGAGTCGGGCACCGTTGATTCTGAGCTGAAACAGAAGGCAAAAGATTACTGTGATAAAATTAAGGAACAACAGGCGATATGTAGTGTCTGTATTGAGAGGTTGTGCTTTTCGAATTTAGTTCAAGTTCAGTTTTGGTGCTTACAGGCTCTACATGAGGTTATTAGAGTCCGGTACTCGTCGATGAGTGTAGATGAGAAGTTTTTTATCAGGAAATCGGTGTTTTCGATTGCATGTCTTGGTGGGTTTGATGATAAGAGTACTGTTAGGGTTTTAGAAGGTCCTGCATTTATAAAGAATAAACTTGCTCAGGTTTTGGTGACTTTGATTTACCATGAGTACCCATTGATTTGGTCGTCGGTGTTTGTTGATTTTTTGTCACAACTGAATAAAGGGGCAGTGTTGATTGATATGTTCTGCCGGATTTTGAATGCTTTGGATGAGGAAGTGATTAATTTGGACTACCCTCGGACACCGGAGGAACTATCAGTGGCAGCGGGGATTAAGGATGCTATGAGGCAGCAGTGTGTAGAACAAATAGTTAGAGCCTGGTACGAGATTGTGTCTATGTATAGGAAGTCTGATGAAGAGCTTTGTGCTAGTGTATTAGAATCAATGAGGAGGTTTATCTCTTGGATTGATATTGGATTAATTGTGAATGATGCCTTTATCCCGTTATTGTTTGAGTTGGTTTTGGTTGATGGGCTCTCCGAACAACTCCGTAGTGCTGCAGCTGGATGTTTGTCAGCAGTAGTATCGAAAAGGATGGATCCACAGGCAAAACTACCGCTTTTGCAAAGTCTTCAAATGCATCGAGTTTTTGGACTGGTAGCTCAAGATCGTGACTCAGAGTTGGTATCTAATGTAGCTGCATTACTTACTGGGTATGCGGTTGAGGTTCTTGAGTGCTTTAAACGGTTGAATTCTGAGGATGCCAAGGGTATTTCAATGGAGCTCTTGAATGAAGTTTTGCCCTCTGTATTTTATGTTATGCAGAACTGTGAGTTGGACTCGGCATTTAGCATTGTGCAATTTCTTTCAGGTTATGTTGGCACAATGAAGACTCTTTCCCCATTGAGGGAAACACAGCTGGGTCATGTAGGTCATATTTTGGAAGTGATCCGTTCACAGATCCGCTATGATCCTATGTACCGTGAAAATCTAGATATTTTGGATAAAATTGGAAAAGAGGAGGAAGATAGGATGGTGGAGTTTAGAAAAGATTTGTTTATGCTGCTGCGTAATGTAGGTCGGGTAGCACCTGATATCACTCAGATATTTATTAGAAACTCATTGGCTACTGCTGTTGGATCATCCCTAGACTGGAATGTTGAAGAGGTGGAAGTTGCACTTTCTCTTTTCTATGCATTTGGTGAGTCAATAAATGGTGAGGCAATTAGAACTGGGAGTGGTCTATTGGGTGAATTGGTACCGATGCTTTTATCTACAAGGTTCCTTTGCCATTCAAATAGGCTAGTTGCACTTGTGTATCTAGAGACAGTAATGAGATACATGAAGTTTGTTCAGGAGAATACCCAATATATTCACTTGGTTTTGGCTGCCTTTCTTGATGAAAGGGGTATACACCATCCAAACGTCAATGTGAGTAGAAGGGCAAGTTATCTGTTTATGAGGGTTGTGAAATTGCTGAGAGTGAAGCTTGTGCCTTTCATAGAAAATATTTTGCAGAATTTACAAGATACAGTTGCTGGGTTTACAAGAATGGATTATACATCAAAAGAGCTTTCAGGATCTGAAGATGGTAGTCACATTTTTGAGGCAATTGGTTTATTGATTGGCATGGAGGATGTACCACCAGCAAAGCAGTCTGATTATCTCTCTTCACTTCTCACTCCTCTTTGTCAACAGGTTGAAGCATTGCTCATGAATGGCAAAGTACCGACTCCAGAAGAGGCACCTCAAAAATTTGCTAATATTAAGCAGATAATCGTGGCGATCAATTCTCTCAGCAAGGGCTTCAGCGAGCGTCTTGTGACTGCTAGTCGCCCTGCACTTGGTCTCATGTTCATGCAGACATTAGATGTTCTTCTTCAAGTACTCGTCGTGTTTCCTAATGTTGAGACTTTGCGCAGTAAGGTAACATCATTTGTACACCGCATGGTGGACACTCTAGGAGCATCTATTTTTCCTTACCTCCCAAAGGCACTGGAGCACTTGCTTGTGGATAGTGAGCCAAAGGAATTGGTTGGTTTGCTTCTATTGCTCAATCAACTGATATGCAAGTTCAACATATTATTCCGTGACATACTGGATGAAGTATTTCCTGCTATAACTGGTAGGATATTAAATATTATTCCGGTAGACACACTCCCTTCAGGACCTGGATCCAATACTGAGGAAAATCGGGAATTGCAAGAACTTCAGCGAACATTATATACGTTTCTTCATGTGATAACTACACATCGATCTATCTTCTGTATTCCTATCCCCCAAGAGTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0000049 GO:0003006 GO:0003674 GO:0003676 GO:0003723 GO:0005049 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005635 GO:0005643 GO:0005737 GO:0005829 GO:0006403 GO:0006405 GO:0006409 GO:0006611 GO:0006810 GO:0006886 GO:0006913 GO:0007275 GO:0008104 GO:0008150 GO:0008536 GO:0009653 GO:0009791 GO:0009888 GO:0009908 GO:0009933 GO:0010014 GO:0012505 GO:0015031 GO:0015833 GO:0015931 GO:0016363 GO:0017016 GO:0019899 GO:0022414 GO:0031267 GO:0031503 GO:0031967 GO:0031974 GO:0031975 GO:0031981 GO:0032501 GO:0032502 GO:0032991 GO:0033036 GO:0034399 GO:0034613 GO:0042886 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0044422 GO:0044424 GO:0044428 GO:0044444 GO:0044446 GO:0044464 GO:0045184 GO:0046907 GO:0048367 GO:0048507 GO:0048532 GO:0048608 GO:0048731 GO:0048856 GO:0050657 GO:0050658 GO:0051020 GO:0051031 GO:0051168 GO:0051169 GO:0051179 GO:0051234 GO:0051236 GO:0051641 GO:0051649 GO:0061458 GO:0070013 GO:0070727 GO:0071166 GO:0071426 GO:0071431 GO:0071528 GO:0071702 GO:0071705 GO:0090567 GO:0097064 GO:0097159 GO:0140104 GO:0140142 GO:1901363

KEGG Pathways

Metabolic & Signaling

ko03013 map03013

Pfam Domains

Protein Families

Xpo1

Protein Analysis

838

Amino Acids

94.66

Weight (kDa)

5.25

Isoelectric Point (pI)

43.07

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0005044)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G72560 AT1G72560 AT1G72560 AT1G72560 AT1G72560 AT1G72560 AT1G72560
fragaria_vesca	FvH4_6g34890 FvH4_6g34890 FvH4_6g34890 FvH4_6g34890 FvH4_6g34890 FvH4_6g34890 FvH4_6g34890
malus_domestica	MD09G1181500.v1.1 MD17G1167700.v1.1
prunus_persica	Prupe.3G039600_v2.0.a1 Prupe.3G039600_v2.0.a1 Prupe.3G039600_v2.0.a1
pyrus_communis	pycom09g09910 pycom17g15940
rosa_chinensis	RchiOBHm_Chr2g0145781
rosa_laevigata	RLG00000020167
rosa_multiflora	Rmu_sc0000473.1_g000003
rosa_roxburghii	Rroxscaffold_152G00434750 Rroxscaffold_2G00100450
rosa_rugosa	Rorug02G0393200
rosa_samantha	Rh2BG459800 Rh2CG434400
rosa_wichuraiana	Rw2G036570

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	347
Acc16I	TGCGCA	1 cut(s)	2144
Acc65I	GGTACC	1 cut(s)	1483
AccB1I	GGYRCC	3 cut(s)	65, 1483, 1969
AccI	GTMKAC	2 cut(s)	1636, 2376
AciI	CCGC	5 cut(s)	551, 842, 944, 1189, 2170
AcsI	RAATTY	4 cut(s)	169, 976, 1744, 1979
AcuI	CTGAAG	4 cut(s)	1830, 2017, 2373, 2420
AfiI	CCNNNNNNNGG	6 cut(s)	1131, 1132, 1377, 2069, 2176, 2215
AhdI	GACNNNNNGTC	1 cut(s)	2055
AjnI	CCWGG	2 cut(s)	602, 2395
AjuI	GAANNNNNNNTTGG	2 cut(s)	1043, 1075
AluBI	AGCT	9 cut(s)	82, 646, 788, 887, 923, 1009, 1144, 1714, 1798
AluI	AGCT	9 cut(s)	82, 646, 788, 887, 923, 1009, 1144, 1714, 1798
Alw21I	GWGCWC	2 cut(s)	1011, 2229
Alw26I	GTCTC	3 cut(s)	1544, 2078, 2129
AlwNI	CAGNNNCTG	3 cut(s)	1763, 1808, 2396
ApeKI	GCWGC	8 cut(s)	548, 574, 782, 785, 923, 1288, 1291, 1613
ApoI	RAATTY	4 cut(s)	169, 976, 1744, 1979
AseI	ATTAAT	2 cut(s)	507, 704
Asp700I	GAANNNNTTC	1 cut(s)	2334
Asp718I	GGTACC	1 cut(s)	1483
AspLEI	GCGC	1 cut(s)	2145
AspS9I	GGNCC	3 cut(s)	14, 335, 2393
AsuHPI	GGTGA	4 cut(s)	385, 1439, 1454, 1487
AsuII	TTCGAA	1 cut(s)	167
AvaII	GGWCC	3 cut(s)	14, 335, 2393
BaeGI	GKGCMC	1 cut(s)	68
BaeI	ACNNNNGTAYC	2 cut(s)	1526, 1559
BamHI	GGATCC	2 cut(s)	823, 2399
BanI	GGYRCC	3 cut(s)	65, 1483, 1969
BanII	GRGCYC	2 cut(s)	762, 1011
BbsI	GAAGAC	2 cut(s)	848, 1121
Bbv12I	GWGCWC	2 cut(s)	1011, 2229
BbvI	GCAGC	8 cut(s)	560, 586, 769, 797, 910, 1275, 1278, 1600
BccI	CCATC	5 cut(s)	749, 814, 1252, 1650, 1808
BcgI	CGANNNNNNTGC	2 cut(s)	792, 826
BciT130I	CCWGG	2 cut(s)	604, 2397
BcoDI	GTCTC	3 cut(s)	1544, 2078, 2129
BfaI	CTAG	7 cut(s)	654, 1217, 1373, 1529, 1547, 2055, 2186
BfmI	CTRYAG	1 cut(s)	783
BisI	GCNGC	8 cut(s)	549, 575, 783, 786, 924, 1289, 1292, 1614
BlsI	GCNGC	8 cut(s)	550, 576, 784, 787, 925, 1290, 1293, 1615
BmcAI	AGTACT	3 cut(s)	42, 316, 2112
Bme1390I	CCNGG	2 cut(s)	604, 2397
Bme18I	GGWCC	3 cut(s)	14, 335, 2393
BmeRI	GACNNNNNGTC	1 cut(s)	2055
BmgT120I	GGNCC	3 cut(s)	14, 335, 2393
BmiI	GGNNCC	7 cut(s)	15, 67, 825, 1485, 1508, 1971, 2401
BmrFI	CCNGG	2 cut(s)	604, 2397
BmrI	ACTGGG	2 cut(s)	945, 1467
BmsI	GCATC	6 cut(s)	553, 706, 874, 976, 1479, 2201
BmuI	ACTGGG	2 cut(s)	945, 1467
BpiI	GAAGAC	2 cut(s)	848, 1121
BplI	GAGNNNNNCTC	2 cut(s)	1049, 1081
BpmI	CTGGAG	2 cut(s)	1944, 2243
Bpu10I	CCTNAGC	1 cut(s)	363
Bpu14I	TTCGAA	1 cut(s)	167
BpuEI	CTTGAG	2 cut(s)	873, 977
Bsa29I	ATCGAT	2 cut(s)	24, 2479
BsaI	GGTCTC	1 cut(s)	2078
BsaJI	CCNNGG	3 cut(s)	17, 521, 990
BsaWI	WCCGGW	3 cut(s)	225, 529, 2371
Bsc4I	CCNNNNNNNGG	6 cut(s)	1131, 1132, 1377, 2069, 2176, 2215
Bse1I	ACTGG	7 cut(s)	885, 940, 1382, 1462, 2226, 2328, 2353
Bse3DI	GCAATG	1 cut(s)	1931
BseBI	CCWGG	2 cut(s)	604, 2397
BseCI	ATCGAT	2 cut(s)	24, 2479
BseDI	CCNNGG	3 cut(s)	17, 521, 990
BseLI	CCNNNNNNNGG	6 cut(s)	1131, 1132, 1377, 2069, 2176, 2215
BseMI	GCAATG	1 cut(s)	1931
BseMII	CTCAG	8 cut(s)	69, 377, 915, 972, 1340, 1694, 2035, 2400
BseNI	ACTGG	7 cut(s)	885, 940, 1382, 1462, 2226, 2328, 2353
BseRI	GAGGAG	3 cut(s)	688, 1259, 1899
BseSI	GKGCMC	1 cut(s)	68
BseXI	GCAGC	8 cut(s)	560, 586, 769, 797, 910, 1275, 1278, 1600
BseYI	CCCAGC	2 cut(s)	1144, 1763
BsgI	GTGCAG	1 cut(s)	2049
BshNI	GGYRCC	3 cut(s)	65, 1483, 1969
BshVI	ATCGAT	2 cut(s)	24, 2479
BsiHKAI	GWGCWC	2 cut(s)	1011, 2229
BsiSI	CCGG	4 cut(s)	226, 475, 530, 2372
BslI	CCNNNNNNNGG	6 cut(s)	1131, 1132, 1377, 2069, 2176, 2215
BsmAI	GTCTC	3 cut(s)	1544, 2078, 2129
BsmI	GAATGC	1 cut(s)	490
Bso31I	GGTCTC	1 cut(s)	2078
Bsp119I	TTCGAA	1 cut(s)	167
Bsp1286I	GDGCHC	4 cut(s)	68, 762, 1011, 2229
Bsp1407I	TGTACA	1 cut(s)	2164
Bsp19I	CCATGG	1 cut(s)	17
BspACI	CCGC	5 cut(s)	551, 842, 944, 1189, 2170
BspCNI	CTCAG	8 cut(s)	70, 376, 914, 973, 1339, 1695, 2034, 2401
BspDI	ATCGAT	2 cut(s)	24, 2479
BspHI	TCATGA	1 cut(s)	1938
BspLI	GGNNCC	7 cut(s)	15, 67, 825, 1485, 1508, 1971, 2401
BspMAI	CTGCAG	1 cut(s)	787
BspQI	GCTCTTC	1 cut(s)	636
BspT104I	TTCGAA	1 cut(s)	167
BspT107I	GGYRCC	3 cut(s)	65, 1483, 1969
BspTNI	GGTCTC	1 cut(s)	2078
BsrDI	GCAATG	1 cut(s)	1931
BsrGI	TGTACA	1 cut(s)	2164
BsrI	ACTGG	7 cut(s)	885, 940, 1382, 1462, 2226, 2328, 2353
BssECI	CCNNGG	3 cut(s)	17, 521, 990
BssNAI	GTATAC	1 cut(s)	1637
BssT1I	CCWWGG	2 cut(s)	17, 990
Bst1107I	GTATAC	1 cut(s)	1637
Bst2UI	CCWGG	2 cut(s)	604, 2397
Bst4CI	ACNGT	8 cut(s)	70, 107, 319, 972, 1055, 1208, 1555, 1759
Bst6I	CTCTTC	4 cut(s)	636, 1383, 1900, 1959
BstAUI	TGTACA	1 cut(s)	2164
BstBI	TTCGAA	1 cut(s)	167
BstC8I	GCNNGC	1 cut(s)	2039
BstDEI	CTNAG	8 cut(s)	78, 363, 901, 981, 1326, 1703, 2021, 2409
BstDSI	CCRYGG	1 cut(s)	17
BstENI	CCTNNNNNAGG	1 cut(s)	2213
BstHHI	GCGC	1 cut(s)	2145
BstMAI	GTCTC	3 cut(s)	1544, 2078, 2129
BstMWI	GCNNNNNNNGC	1 cut(s)	2275
BstNI	CCWGG	2 cut(s)	604, 2397
BstNSI	RCATGY	1 cut(s)	291
BstSCI	CCNGG	2 cut(s)	602, 2395
BstSFI	CTRYAG	1 cut(s)	783
BstSLI	GKGCMC	1 cut(s)	68
BstV1I	GCAGC	8 cut(s)	560, 586, 769, 797, 910, 1275, 1278, 1600
BstV2I	GAAGAC	2 cut(s)	848, 1121
BstX2I	RGATCY	4 cut(s)	823, 1185, 1805, 2399
BstXI	CCANNNNNNTGG	1 cut(s)	405
BstYI	RGATCY	4 cut(s)	823, 1185, 1805, 2399
BstZ17I	GTATAC	1 cut(s)	1637
Bsu15I	ATCGAT	2 cut(s)	24, 2479
BsuTUI	ATCGAT	2 cut(s)	24, 2479
BtgI	CCRYGG	1 cut(s)	17
BtsI	GCAGTG	2 cut(s)	459, 584
BtsIMutI	CAGTG	4 cut(s)	459, 549, 584, 2219
Cac8I	GCNNGC	1 cut(s)	2039
CaiI	CAGNNNCTG	3 cut(s)	1763, 1808, 2396
CciI	TCATGA	1 cut(s)	1938
CfoI	GCGC	1 cut(s)	2145
Cfr13I	GGNCC	3 cut(s)	14, 335, 2393
ClaI	ATCGAT	2 cut(s)	24, 2479
CseI	GACGC	1 cut(s)	2030
DdeI	CTNAG	8 cut(s)	78, 363, 901, 981, 1326, 1703, 2021, 2409
DraI	TTTAAA	1 cut(s)	967
DriI	GACNNNNNGTC	1 cut(s)	2055
Eam1104I	CTCTTC	4 cut(s)	636, 1383, 1900, 1959
Eam1105I	GACNNNNNGTC	1 cut(s)	2055
EarI	CTCTTC	4 cut(s)	636, 1383, 1900, 1959
Ecl136II	GAGCTC	1 cut(s)	1009
Eco130I	CCWWGG	2 cut(s)	17, 990
Eco24I	GRGCYC	2 cut(s)	762, 1011
Eco31I	GGTCTC	1 cut(s)	2078
Eco32I	GATATC	1 cut(s)	1321
Eco47I	GGWCC	3 cut(s)	14, 335, 2393
Eco53kI	GAGCTC	1 cut(s)	1009
Eco57I	CTGAAG	4 cut(s)	1830, 2017, 2373, 2420
EcoICRI	GAGCTC	1 cut(s)	1009
EcoNI	CCTNNNNNAGG	1 cut(s)	2213
EcoO109I	RGGNCCY	2 cut(s)	335, 2393
EcoRI	GAATTC	1 cut(s)	976
EcoRII	CCWGG	2 cut(s)	602, 2395
EcoRV	GATATC	1 cut(s)	1321
EcoT14I	CCWWGG	2 cut(s)	17, 990
EcoT22I	ATGCAT	2 cut(s)	867, 1423
EcoT38I	GRGCYC	2 cut(s)	762, 1011
ErhI	CCWWGG	2 cut(s)	17, 990
FalI	AAGNNNNNCTT	4 cut(s)	27, 59, 1389, 1421
FauI	CCCGC	1 cut(s)	544
FblI	GTMKAC	2 cut(s)	1636, 2376
Fnu4HI	GCNGC	8 cut(s)	549, 575, 783, 786, 924, 1289, 1292, 1614
FriOI	GRGCYC	2 cut(s)	762, 1011
Fsp4HI	GCNGC	8 cut(s)	549, 575, 783, 786, 924, 1289, 1292, 1614
FspBI	CTAG	7 cut(s)	654, 1217, 1373, 1529, 1547, 2055, 2186
FspI	TGCGCA	1 cut(s)	2144
GlaI	GCGC	1 cut(s)	2144
GluI	GCNGC	8 cut(s)	549, 575, 783, 786, 924, 1289, 1292, 1614
GsaI	CCCAGC	2 cut(s)	1148, 1767
GsuI	CTGGAG	2 cut(s)	1944, 2243
HapII	CCGG	4 cut(s)	226, 475, 530, 2372
HgaI	GACGC	1 cut(s)	2030
HhaI	GCGC	1 cut(s)	2145
Hin6I	GCGC	1 cut(s)	2143
HinP1I	GCGC	1 cut(s)	2143
HincII	GTYRAC	1 cut(s)	1919
HindII	GTYRAC	1 cut(s)	1919
HindIII	AAGCTT	1 cut(s)	1712
HinfI	GANTC	9 cut(s)	59, 74, 222, 665, 899, 1064, 1117, 1430, 1957
HpaII	CCGG	4 cut(s)	226, 475, 530, 2372
HphI	GGTGA	4 cut(s)	385, 1439, 1454, 1487
Hpy166II	GTNNAC	7 cut(s)	1181, 1637, 1770, 1919, 2167, 2179, 2377
Hpy188I	TCNGA	9 cut(s)	79, 525, 637, 766, 904, 982, 1329, 1810, 1885
Hpy8I	GTNNAC	7 cut(s)	1181, 1637, 1770, 1919, 2167, 2179, 2377
Hpy99I	CGWCG	3 cut(s)	238, 415, 2120
HpyAV	CCTTC	4 cut(s)	85, 326, 1659, 2397
HpyCH4III	ACNGT	8 cut(s)	70, 107, 319, 972, 1055, 1208, 1555, 1759
HpyCH4IV	ACGT	2 cut(s)	1650, 2453
HpyF10VI	GCNNNNNNNGC	1 cut(s)	2275
HpyF3I	CTNAG	8 cut(s)	78, 363, 901, 981, 1326, 1703, 2021, 2409
HpySE526I	ACGT	2 cut(s)	1650, 2453
HspAI	GCGC	1 cut(s)	2143
KpnI	GGTACC	1 cut(s)	1487
LguI	GCTCTTC	1 cut(s)	636
LmnI	GCTCC	3 cut(s)	1006, 2189, 2224
Lsp1109I	GCAGC	8 cut(s)	560, 586, 769, 797, 910, 1275, 1278, 1600
LweI	GCATC	6 cut(s)	553, 706, 874, 976, 1479, 2201
MaeI	CTAG	7 cut(s)	654, 1217, 1373, 1529, 1547, 2055, 2186
MaeII	ACGT	2 cut(s)	1650, 2453
MaeIII	GTNAC	7 cut(s)	373, 432, 896, 1820, 2047, 2152, 2315
MfeI	CAATTG	1 cut(s)	1836
MflI	RGATCY	4 cut(s)	823, 1185, 1805, 2399
MhlI	GDGCHC	4 cut(s)	68, 762, 1011, 2229
MlyI	GAGTC	7 cut(s)	68, 231, 893, 1058, 1111, 1439, 1951
MmeI	TCCRAC	2 cut(s)	1041, 1342
Mph1103I	ATGCAT	2 cut(s)	867, 1423
MroXI	GAANNNNTTC	1 cut(s)	2334
MseI	TTAA	7 cut(s)	117, 507, 558, 704, 966, 1992, 2360
MslI	CAYNNNNRTG	1 cut(s)	2081
MspA1I	CMGCKG	3 cut(s)	551, 788, 1144
MspI	CCGG	4 cut(s)	226, 475, 530, 2372
MspR9I	CCNGG	2 cut(s)	604, 2397
MunI	CAATTG	1 cut(s)	1836
Mva1269I	GAATGC	1 cut(s)	490
MvaI	CCWGG	2 cut(s)	604, 2397
MwoI	GCNNNNNNNGC	1 cut(s)	2275
NcoI	CCATGG	1 cut(s)	17
NlaIV	GGNNCC	7 cut(s)	15, 67, 825, 1485, 1508, 1971, 2401
NmeAIII	GCCGAG	1 cut(s)	1046
NmuCI	GTSAC	6 cut(s)	373, 432, 896, 1820, 2047, 2315
NsbI	TGCGCA	1 cut(s)	2144
NsiI	ATGCAT	2 cut(s)	867, 1423
NspI	RCATGY	1 cut(s)	291
NspV	TTCGAA	1 cut(s)	167
PagI	TCATGA	1 cut(s)	1938
PciSI	GCTCTTC	1 cut(s)	636
PcsI	WCGNNNNNNNCGW	1 cut(s)	278
PctI	GAATGC	1 cut(s)	490
PdmI	GAANNNNTTC	1 cut(s)	2334
PfeI	GAWTC	2 cut(s)	74, 665
PkrI	GCNGC	8 cut(s)	550, 576, 784, 787, 925, 1290, 1293, 1615
PleI	GAGTC	7 cut(s)	67, 230, 893, 1058, 1111, 1438, 1951
PpsI	GAGTC	7 cut(s)	67, 230, 893, 1058, 1111, 1438, 1951
PpuMI	RGGWCCY	2 cut(s)	335, 2393
PshBI	ATTAAT	2 cut(s)	507, 704
PsiI	TTATAA	1 cut(s)	347
Psp124BI	GAGCTC	1 cut(s)	1011
Psp5II	RGGWCCY	2 cut(s)	335, 2393
Psp6I	CCWGG	2 cut(s)	602, 2395
PspFI	CCCAGC	2 cut(s)	1144, 1763
PspGI	CCWGG	2 cut(s)	602, 2395
PspN4I	GGNNCC	7 cut(s)	15, 67, 825, 1485, 1508, 1971, 2401
PspPI	GGNCC	3 cut(s)	14, 335, 2393
PspPPI	RGGWCCY	2 cut(s)	335, 2393
PsrI	GAACNNNNNNTAC	2 cut(s)	2434, 2466
PstI	CTGCAG	1 cut(s)	787
PstNI	CAGNNNCTG	3 cut(s)	1763, 1808, 2396
PsuI	RGATCY	4 cut(s)	823, 1185, 1805, 2399
PvuII	CAGCTG	2 cut(s)	788, 1144
RseI	CAYNNNNRTG	1 cut(s)	2081
SacI	GAGCTC	1 cut(s)	1011
SapI	GCTCTTC	1 cut(s)	636
SaqAI	TTAA	7 cut(s)	117, 507, 558, 704, 966, 1992, 2360
SatI	GCNGC	8 cut(s)	549, 575, 783, 786, 924, 1289, 1292, 1614
Sau96I	GGNCC	3 cut(s)	14, 335, 2393
ScaI	AGTACT	3 cut(s)	42, 316, 2112
SchI	GAGTC	7 cut(s)	68, 231, 893, 1058, 1111, 1439, 1951
ScrFI	CCNGG	2 cut(s)	604, 2397
SduI	GDGCHC	4 cut(s)	68, 762, 1011, 2229
SfaNI	GCATC	6 cut(s)	553, 706, 874, 976, 1479, 2201
SfcI	CTRYAG	1 cut(s)	783
SfuI	TTCGAA	1 cut(s)	167
SinI	GGWCC	3 cut(s)	14, 335, 2393
SmiMI	CAYNNNNRTG	1 cut(s)	2081
SmlI	CTYRAG	2 cut(s)	888, 956
SmoI	CTYRAG	2 cut(s)	888, 956
SsiI	CCGC	5 cut(s)	551, 842, 944, 1189, 2170
SspI	AATATT	3 cut(s)	1735, 1990, 2365
SspMI	CTAG	7 cut(s)	654, 1217, 1373, 1529, 1547, 2055, 2186
SstI	GAGCTC	1 cut(s)	1011
StyD4I	CCNGG	2 cut(s)	602, 2395
StyI	CCWWGG	2 cut(s)	17, 990
TaaI	ACNGT	8 cut(s)	70, 107, 319, 972, 1055, 1208, 1555, 1759
TaiI	ACGT	2 cut(s)	1653, 2456
TaqI	TCGA	8 cut(s)	24, 30, 167, 236, 281, 812, 868, 2479
TatI	WGTACW	4 cut(s)	40, 314, 2110, 2164
TfiI	GAWTC	2 cut(s)	74, 665
Tru1I	TTAA	7 cut(s)	117, 507, 558, 704, 966, 1992, 2360
Tru9I	TTAA	7 cut(s)	117, 507, 558, 704, 966, 1992, 2360
TscAI	CASTG	4 cut(s)	459, 549, 584, 2226
TseFI	GTSAC	6 cut(s)	373, 432, 896, 1820, 2047, 2315
TseI	GCWGC	8 cut(s)	548, 574, 782, 785, 923, 1288, 1291, 1613
Tsp45I	GTSAC	6 cut(s)	373, 432, 896, 1820, 2047, 2315
TspGWI	ACGGA	3 cut(s)	764, 1166, 2303
TspRI	CASTG	4 cut(s)	459, 549, 584, 2226
VpaK11BI	GGWCC	3 cut(s)	14, 335, 2393
VspI	ATTAAT	2 cut(s)	507, 704
XagI	CCTNNNNNAGG	1 cut(s)	2213
XapI	RAATTY	4 cut(s)	169, 976, 1744, 1979
XbaI	TCTAGA	2 cut(s)	1216, 1546
XceI	RCATGY	1 cut(s)	291
XmiI	GTMKAC	2 cut(s)	1636, 2376
XmnI	GAANNNNTTC	1 cut(s)	2334
XspI	CTAG	7 cut(s)	654, 1217, 1373, 1529, 1547, 2055, 2186
ZrmI	AGTACT	3 cut(s)	42, 316, 2112
Zsp2I	ATGCAT	2 cut(s)	867, 1423

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.