Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000002

Orthogroup ID

OG0005044

Physical Location & Seq

Genomic Coordinates Reverse (-)

22303789 .. 22311909

Gene Structure 8121 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_2G00100450.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2907 bp

ATGGCTGATCTTGAGAAAGCTATACTGATTGTTTTTGATCAATCGGGCACCGTTCATTCCGAGCTGAAACAGAAGGCGACGGAATACTGTGATAAAATTAAGGATGAACAAGCGATTTGTAGCATCTGCATTGAAAGGATATGTTTTTCGAATTTATATCAAGTCCAGTTTTGGTGTTTGCAGACGCTGCACGAGGTTGTTAAGGTCCGGTACTCATCAATTAGTCCAGACGAGAGGTATTTGATCCGAAAGTCGGTGTTTTCAATTGCATGTTTTGGTGCTATTGATGATAACAATGTTGTTGTTAGGGTTTTAGAAGGTCCTGCATTTATAAAGAACAAACTTGCTCAGGTCCTGGTAACTTTGATTTATTTCGAGTACCCGTTAATTTGGTCATCTGTGTTTGTGGATTTCTTGTCACAATTGAGTAAAGGGGCATTGGTGATTGATATGTTTTGTCGGGTTTTGAATGCTTTGGACGATGAACTGATCAATGTGGATTACCCTCGGACACCTGAAGAACTATCAGTGGCAACCCGGGTTAAGGATGCAATGAGGCAGCAGTGTGTAGCTCAAATAGTTAGAGCTTGGTATGATATTGTGTCTATGTATAGGAACTCTGATGAAGAGCTGTGTGCTAGTGTATTAGATGCAATGAGGAGGTTTATTGCTTGGATTGATATTGGTTTAATTGTAAATGATGCGTTCATCCCGTTATTGTTTGATTTGGTGTTGGCTGATGGGCTGTCTGAACAACTCCGAGGTGCTGCAGCTGGGTGTTTGACAGCAGTGGTATCCAAAAGGATGGAGCCGCAATCAAAACTACCACTATTGCAGAGTCTTCAAATCCGTCGAGTGTTTGCGCTAGTAGCCAAGGATAGCGACTCAGAGTTGGTTTCCAAAGTAGCTGCATTGCTTACTGGATATGCGGTTGAGGCTCTTGAATGCTTTAAAAGCTTGAATTCCGAGGATGCAAAGGGTGTTTCAATGGAGCTCTTGAATGAAGTTCTGCCCTCCGTATTCTATGTGATGCAGAATTGTGAGTTGGAATCTACATTTAGTATTGTGCAATTTCTTTTAAGTTATGTTGCCACAATGAAGAATCTTTCTCCATTGAGGGAAACACAGCTGCTTCATGTGGGTCAGATTTTGGAAGTAATTCGTACAGAGATCCGCTATGATCCTATGTACCGTGATAATCTTGATACATTGGATAAGATTGGAAAGGAAGAAGAAGATAGAATGGTGGAGTTCAGAAAGGATTTGTTTGTGCTGTTGCGCAATATAGGTCGGGTAGCTCCAGATGTTTGTCAGATATTCATTAGAAACTCATTGGCTGCTTCTGTTGCGTCCTCGTCAGACTGGAATGTTGAAGAGGTGGAAGCTGCACTTTCTCTTTTCTATGCATTTAGTGAGTCAATGAATGGTGAGGCAATGAAAAGTGGCAGTGGCCTCTTAGGTGAATTGGTCCCAATGCTTTTATCTACAAGGTTCCCTTGCCATTCAAATAGGCTAGTTGCACTTGTGTATCTGGAAACAGTTACAAGATATATGAAGTTTGTACAGGAGAATACCCAATACATTCACATGGTTTTGGCTGTCTTTCTTGATGAAAGAGGTATACACCATCCAAATGTCAATGTGAGTCGAAGAGCAAGTTATCTGTTTATGAAGGCTGTGAGATTGCTAAAATTGAAGCTTGTGCCTTTTATAGAGAATATTCTGCAGAGTCTGCAAGACAGAGTCGCTGGATTTACAAGTATGGATTATACAAAAGATCTTTCTGCATCTGAAGATGGTAGTCACATTTTTGAGGCAATTGGTGTATTAATAGGTATGGAAGATGTGGCACCAGCAAAGCAGTCTGATTATCTCTCCTCACTTCTGACACCTCTTTGTCAACAGGTCGAAGCGTTGCTTATAAATGCCAAATTATTGACTCCTGAAGAGGCGCCACAAAAAATTGCTAATATTCAGCAGATAATTGTGGCGATTAATTCTCTCAGCAAGGGCTTCAGTGAGCGACTTGTAACTACTTGTCGTCCTGCAATAGGTCTCATGTTCAAGCAGGTAACGTCATTTATACACCGAATGGTGGAGACTTTAGGAGCATCCGTTTTCCCATACCTCCCAAAGGCACTGGAGCAATTGCTTGTGGATAGCCAGCCGAAGGAATTGGTTGGTCTGCTTGTATTGCTTAATCAACTGATATGCAAGTTCAACACATTATTTAGTGACATATTGGATGAAGTATTTCCTGCTATTGCTGGTAGGATATTGAACATTATTACAATAGATGCATTCCCTTCAGGACCTGGATCCAATACTGAGGAAAATCGGGAGCTGCAAGAAGTTCAGCGAACATTATATACATTTCTTCATGTGATAACTACACATGATCTATCATCTGTTTTCCTATCCCCCAAAAGTAGGAGCTACTTGCAGCCAATTATGCAGTTGCTTTTGTTCACGTCTTGTAAACACAAGGACATTCTTGTAAGAAAGGCATGTGTACAGATATTCATTAGATTAATTAAAGATTGGTGTACCATGCCTAATGGTGAAGAAAAGGTACCGGGTTTCCAGAGTTTTATAATAGAGACCTTTGCTACAAACTGTTGTTTGTACAGCCTGCTTGACAACTCCTTCGAGTTTCGTGACGCAAATACTCTTGTTTTGTTTGGAGAAATTGTACTGGCTCAGAAGGTCATGTATGAAAAGTTTGGCAATGATTTCCTAGTTCATTTTGTCTCGAAAGGCTTTCCAGCAGCACATTGCCCCCAAGATCTGGCTGAGAAATATTGCCAGCAGTTGCAGGGAAGTGATATCAAGGCATTGAAATCATTTTACCAGTCACTCATTGAAAACTTAAGGCTTCAGCAGAACGGGAACCTTCCTGTAAGATAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0000049 GO:0003006 GO:0003674 GO:0003676 GO:0003723 GO:0005049 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005635 GO:0005643 GO:0005737 GO:0005829 GO:0006403 GO:0006405 GO:0006409 GO:0006611 GO:0006810 GO:0006886 GO:0006913 GO:0007275 GO:0008104 GO:0008150 GO:0008536 GO:0009653 GO:0009791 GO:0009888 GO:0009908 GO:0009933 GO:0010014 GO:0012505 GO:0015031 GO:0015833 GO:0015931 GO:0016363 GO:0017016 GO:0019899 GO:0022414 GO:0031267 GO:0031503 GO:0031967 GO:0031974 GO:0031975 GO:0031981 GO:0032501 GO:0032502 GO:0032991 GO:0033036 GO:0034399 GO:0034613 GO:0042886 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0044422 GO:0044424 GO:0044428 GO:0044444 GO:0044446 GO:0044464 GO:0045184 GO:0046907 GO:0048367 GO:0048507 GO:0048532 GO:0048608 GO:0048731 GO:0048856 GO:0050657 GO:0050658 GO:0051020 GO:0051031 GO:0051168 GO:0051169 GO:0051179 GO:0051234 GO:0051236 GO:0051641 GO:0051649 GO:0061458 GO:0070013 GO:0070727 GO:0071166 GO:0071426 GO:0071431 GO:0071528 GO:0071702 GO:0071705 GO:0090567 GO:0097064 GO:0097159 GO:0140104 GO:0140142 GO:1901363

KEGG Pathways

Metabolic & Signaling

ko03013 map03013

Pfam Domains

Protein Families

Xpo1

Protein Analysis

968

Amino Acids

109.29

Weight (kDa)

5.34

Isoelectric Point (pI)

43.65

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Xpo1	PF08389	108 - 261	9.3e-37	Exportin 1-like protein
Exportin-T	PF19282	329 - 692	9.1e-39	Exportin-T
Exportin-T	PF19282	696 - 956	5.5e-40	Exportin-T

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

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Orthologous Genes (Group: OG0005044)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G72560 AT1G72560 AT1G72560 AT1G72560 AT1G72560 AT1G72560 AT1G72560
fragaria_vesca	FvH4_6g34890 FvH4_6g34890 FvH4_6g34890 FvH4_6g34890 FvH4_6g34890 FvH4_6g34890 FvH4_6g34890
malus_domestica	MD09G1181500.v1.1 MD17G1167700.v1.1
prunus_persica	Prupe.3G039600_v2.0.a1 Prupe.3G039600_v2.0.a1 Prupe.3G039600_v2.0.a1
pyrus_communis	pycom09g09910 pycom17g15940
rosa_chinensis	RchiOBHm_Chr2g0145781
rosa_laevigata	RLG00000020167
rosa_multiflora	Rmu_sc0000473.1_g000003
rosa_roxburghii	Rroxscaffold_152G00434750 Rroxscaffold_2G00100450
rosa_rugosa	Rorug02G0393200
rosa_samantha	Rh2BG459800 Rh2CG434400
rosa_wichuraiana	Rw2G036570

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	3 cut(s)	332, 1922, 2594
Acc16I	TGCGCA	1 cut(s)	1280
Acc36I	ACCTGC	1 cut(s)	2059
Acc65I	GGTACC	1 cut(s)	2572
AccB1I	GGYRCC	4 cut(s)	47, 1849, 1951, 2572
AccB7I	CCANNNNNTGG	1 cut(s)	2788
AccI	GTMKAC	1 cut(s)	1621
AciI	CCGC	3 cut(s)	812, 929, 1174
AclWI	GGATC	5 cut(s)	238, 1165, 1175, 2313, 2326
AcsI	RAATTY	2 cut(s)	151, 961
AcuI	CTGAAG	6 cut(s)	537, 1812, 1965, 1999, 2292, 2861
AcyI	GRCGYC	1 cut(s)	1952
AfiI	CCNNNNNNNGG	8 cut(s)	253, 544, 2051, 2095, 2134, 2170, 2430, 2788
AflII	CTTAAG	1 cut(s)	2869
AjiI	CACGTC	1 cut(s)	2472
AjnI	CCWGG	2 cut(s)	354, 2314
AjuI	GAANNNNNNNTTGG	2 cut(s)	1028, 1060
Alw21I	GWGCWC	1 cut(s)	996
Alw26I	GTCTC	4 cut(s)	2060, 2093, 2594, 2755
AlwI	GGATC	5 cut(s)	238, 1165, 1175, 2313, 2326
AlwNI	CAGNNNCTG	4 cut(s)	187, 355, 1732, 2315
Ama87I	CYCGRG	1 cut(s)	537
AoxI	GGCC	1 cut(s)	1450
ApoI	RAATTY	2 cut(s)	151, 961
ArsI	GACNNNNNNTTYG	2 cut(s)	2630, 2662
AseI	ATTAAT	3 cut(s)	1829, 1995, 2531
Asp700I	GAANNNNTTC	2 cut(s)	1158, 2253
Asp718I	GGTACC	1 cut(s)	2572
AspLEI	GCGC	3 cut(s)	865, 1281, 1954
AspS9I	GGNCC	5 cut(s)	205, 320, 352, 1468, 2312
AsuC2I	CCSGG	3 cut(s)	538, 539, 2577
AsuHPI	GGTGA	4 cut(s)	454, 1439, 1472, 2573
AsuII	TTCGAA	1 cut(s)	149
AvaI	CYCGRG	1 cut(s)	537
AvaII	GGWCC	5 cut(s)	205, 320, 352, 1468, 2312
BaeGI	GKGCMC	1 cut(s)	50
BaeI	ACNNNNGTAYC	2 cut(s)	1511, 1544
BamHI	GGATCC	1 cut(s)	2318
BanI	GGYRCC	4 cut(s)	47, 1849, 1951, 2572
BanII	GRGCYC	1 cut(s)	996
BarI	GAAGNNNNNNTAC	2 cut(s)	2556, 2588
BauI	CACGAG	1 cut(s)	191
BbsI	GAAGAC	1 cut(s)	833
Bbv12I	GWGCWC	1 cut(s)	996
BccI	CCATC	4 cut(s)	734, 799, 1635, 1790
BciT130I	CCWGG	2 cut(s)	356, 2316
BciVI	GTATCC	1 cut(s)	805
BclI	TGATCA	2 cut(s)	37, 489
BcnI	CCSGG	3 cut(s)	538, 539, 2577
BcoDI	GTCTC	4 cut(s)	2060, 2093, 2594, 2755
BfaI	CTAG	4 cut(s)	639, 866, 1514, 2738
BfmI	CTRYAG	2 cut(s)	768, 1724
BfoI	RGCGCY	1 cut(s)	1955
BfrI	CTTAAG	1 cut(s)	2869
BfuAI	ACCTGC	1 cut(s)	2059
BfuI	GTATCC	1 cut(s)	805
BglII	AGATCT	2 cut(s)	1777, 2785
Bme1390I	CCNGG	5 cut(s)	356, 538, 539, 2316, 2577
Bme18I	GGWCC	5 cut(s)	205, 320, 352, 1468, 2312
BmeT110I	CYCGRG	1 cut(s)	537
BmgBI	CACGTC	1 cut(s)	2472
BmgT120I	GGNCC	5 cut(s)	205, 320, 352, 1468, 2312
BmiI	GGNNCC	9 cut(s)	49, 810, 1470, 1493, 1851, 1953, 2320, 2574, 2891
BmrFI	CCNGG	5 cut(s)	356, 538, 539, 2316, 2577
BmsI	GCATC	9 cut(s)	132, 538, 640, 691, 961, 1020, 1796, 2120, 2287
BpiI	GAAGAC	1 cut(s)	833
BpmI	CTGGAG	2 cut(s)	1284, 2162
Bpu10I	CCTNAGC	1 cut(s)	348
Bpu14I	TTCGAA	1 cut(s)	149
BpuEI	CTTGAG	1 cut(s)	32
BpuMI	CCSGG	3 cut(s)	538, 539, 2577
BsaHI	GRCGYC	1 cut(s)	1952
BsaI	GGTCTC	2 cut(s)	2060, 2594
BsaJI	CCNNGG	5 cut(s)	506, 537, 760, 873, 966
BsaWI	WCCGGW	1 cut(s)	207
BsaXI	ACNNNNNCTCC	4 cut(s)	2100, 2130, 2676, 2706
Bsc4I	CCNNNNNNNGG	8 cut(s)	253, 544, 2051, 2095, 2134, 2170, 2430, 2788
Bse1I	ACTGG	6 cut(s)	166, 925, 1367, 2145, 2700, 2851
Bse3DI	GCAATG	6 cut(s)	558, 660, 911, 1440, 2734, 2773
BseBI	CCWGG	2 cut(s)	356, 2316
BseDI	CCNNGG	5 cut(s)	506, 537, 760, 873, 966
BseGI	GGATG	8 cut(s)	109, 553, 708, 810, 976, 1627, 2111, 2251
BseLI	CCNNNNNNNGG	8 cut(s)	253, 544, 2051, 2095, 2134, 2170, 2430, 2788
BseMI	GCAATG	6 cut(s)	558, 660, 911, 1440, 2734, 2773
BseMII	CTCAG	6 cut(s)	362, 900, 2017, 2319, 2714, 2784
BseNI	ACTGG	6 cut(s)	166, 925, 1367, 2145, 2700, 2851
BseRI	GAGGAG	2 cut(s)	673, 1867
BseSI	GKGCMC	1 cut(s)	50
BseYI	CCCAGC	1 cut(s)	773
BsgI	GTGCAG	2 cut(s)	173, 1371
BshFI	GGCC	1 cut(s)	1452
BshNI	GGYRCC	4 cut(s)	47, 1849, 1951, 2572
BsiHKAI	GWGCWC	1 cut(s)	996
BsiHKCI	CYCGRG	1 cut(s)	537
BsiSI	CCGG	3 cut(s)	208, 538, 2576
BslFI	GGGAC	1 cut(s)	1454
BslI	CCNNNNNNNGG	8 cut(s)	253, 544, 2051, 2095, 2134, 2170, 2430, 2788
BsmAI	GTCTC	4 cut(s)	2060, 2093, 2594, 2755
BsmFI	GGGAC	1 cut(s)	1454
BsmI	GAATGC	3 cut(s)	475, 950, 2300
BsnI	GGCC	1 cut(s)	1452
Bso31I	GGTCTC	2 cut(s)	2060, 2594
BsoBI	CYCGRG	1 cut(s)	537
Bsp119I	TTCGAA	1 cut(s)	149
Bsp1286I	GDGCHC	2 cut(s)	50, 996
Bsp1407I	TGTACA	3 cut(s)	1561, 2512, 2625
BspACI	CCGC	3 cut(s)	812, 929, 1174
BspANI	GGCC	1 cut(s)	1452
BspCNI	CTCAG	6 cut(s)	361, 899, 2016, 2320, 2713, 2785
BspLI	GGNNCC	9 cut(s)	49, 810, 1470, 1493, 1851, 1953, 2320, 2574, 2891
BspMAI	CTGCAG	2 cut(s)	772, 1728
BspMI	ACCTGC	1 cut(s)	2059
BspPI	GGATC	5 cut(s)	238, 1165, 1175, 2313, 2326
BspQI	GCTCTTC	2 cut(s)	621, 1645
BspT104I	TTCGAA	1 cut(s)	149
BspT107I	GGYRCC	4 cut(s)	47, 1849, 1951, 2572
BspTI	CTTAAG	1 cut(s)	2869
BspTNI	GGTCTC	2 cut(s)	2060, 2594
BsrDI	GCAATG	6 cut(s)	558, 660, 911, 1440, 2734, 2773
BsrGI	TGTACA	3 cut(s)	1561, 2512, 2625
BsrI	ACTGG	6 cut(s)	166, 925, 1367, 2145, 2700, 2851
BssECI	CCNNGG	5 cut(s)	506, 537, 760, 873, 966
BssNAI	GTATAC	1 cut(s)	1622
BssNI	GRCGYC	1 cut(s)	1952
BssSI	CACGAG	1 cut(s)	191
BssT1I	CCWWGG	1 cut(s)	873
Bst1107I	GTATAC	1 cut(s)	1622
Bst2BI	CACGAG	1 cut(s)	191
Bst2UI	CCWGG	2 cut(s)	356, 2316
Bst4CI	ACNGT	5 cut(s)	52, 89, 1193, 1540, 2618
Bst6I	CTCTTC	4 cut(s)	621, 1368, 1645, 1941
BstACI	GRCGYC	1 cut(s)	1952
BstAFI	CTTAAG	1 cut(s)	2869
BstAPI	GCANNNNNTGC	2 cut(s)	187, 1732
BstAUI	TGTACA	3 cut(s)	1561, 2512, 2625
BstBI	TTCGAA	1 cut(s)	149
BstC8I	GCNNGC	3 cut(s)	2165, 2633, 2807
BstDEI	CTNAG	7 cut(s)	348, 886, 1456, 2003, 2328, 2700, 2793
BstENI	CCTNNNNNAGG	2 cut(s)	2049, 2132
BstF5I	GGATG	8 cut(s)	109, 553, 708, 810, 976, 1627, 2111, 2251
BstH2I	RGCGCY	1 cut(s)	1955
BstHHI	GCGC	3 cut(s)	865, 1281, 1954
BstMAI	GTCTC	4 cut(s)	2060, 2093, 2594, 2755
BstMWI	GCNNNNNNNGC	8 cut(s)	187, 869, 935, 954, 1346, 1732, 2194, 2452
BstNI	CCWGG	2 cut(s)	356, 2316
BstNSI	RCATGY	2 cut(s)	273, 2511
BstSCI	CCNGG	5 cut(s)	354, 536, 537, 2314, 2575
BstSFI	CTRYAG	2 cut(s)	768, 1724
BstSLI	GKGCMC	1 cut(s)	50
BstV2I	GAAGAC	1 cut(s)	833
BstX2I	RGATCY	4 cut(s)	1170, 1777, 2318, 2785
BstXI	CCANNNNNNTGG	1 cut(s)	805
BstYI	RGATCY	4 cut(s)	1170, 1777, 2318, 2785
BstZ17I	GTATAC	1 cut(s)	1622
BsuI	GTATCC	1 cut(s)	805
BsuRI	GGCC	1 cut(s)	1452
BtrI	CACGTC	1 cut(s)	2472
BtsCI	GGATG	8 cut(s)	109, 553, 708, 810, 976, 1627, 2111, 2251
BtsI	GCAGTG	3 cut(s)	569, 795, 1453
BtsIMutI	CAGTG	6 cut(s)	534, 569, 795, 1453, 2023, 2138
BveI	ACCTGC	1 cut(s)	2059
Cac8I	GCNNGC	3 cut(s)	2165, 2633, 2807
CaiI	CAGNNNCTG	4 cut(s)	187, 355, 1732, 2315
CfoI	GCGC	3 cut(s)	865, 1281, 1954
Cfr13I	GGNCC	5 cut(s)	205, 320, 352, 1468, 2312
Cfr9I	CCCGGG	1 cut(s)	537
CseI	GACGC	3 cut(s)	193, 1338, 2669
CviAII	CATG	9 cut(s)	270, 1136, 1588, 2059, 2381, 2396, 2508, 2551, 2710
DdeI	CTNAG	7 cut(s)	348, 886, 1456, 2003, 2328, 2700, 2793
DinI	GGCGCC	1 cut(s)	1953
DraI	TTTAAA	1 cut(s)	952
Eam1104I	CTCTTC	4 cut(s)	621, 1368, 1645, 1941
EarI	CTCTTC	4 cut(s)	621, 1368, 1645, 1941
Ecl136II	GAGCTC	1 cut(s)	994
Eco130I	CCWWGG	1 cut(s)	873
Eco24I	GRGCYC	1 cut(s)	996
Eco31I	GGTCTC	2 cut(s)	2060, 2594
Eco32I	GATATC	1 cut(s)	2827
Eco47I	GGWCC	5 cut(s)	205, 320, 352, 1468, 2312
Eco53kI	GAGCTC	1 cut(s)	994
Eco57I	CTGAAG	6 cut(s)	537, 1812, 1965, 1999, 2292, 2861
Eco88I	CYCGRG	1 cut(s)	537
EcoICRI	GAGCTC	1 cut(s)	994
EcoNI	CCTNNNNNAGG	2 cut(s)	2049, 2132
EcoO109I	RGGNCCY	3 cut(s)	320, 352, 2312
EcoRI	GAATTC	1 cut(s)	961
EcoRII	CCWGG	2 cut(s)	354, 2314
EcoRV	GATATC	1 cut(s)	2827
EcoT14I	CCWWGG	1 cut(s)	873
EcoT22I	ATGCAT	2 cut(s)	1408, 2302
EcoT38I	GRGCYC	1 cut(s)	996
EgeI	GGCGCC	1 cut(s)	1953
EheI	GGCGCC	1 cut(s)	1953
ErhI	CCWWGG	1 cut(s)	873
FaeI	CATG	9 cut(s)	273, 1139, 1591, 2062, 2384, 2399, 2511, 2554, 2713
FalI	AAGNNNNNCTT	6 cut(s)	1374, 1406, 1480, 1512, 1902, 1934
FaqI	GGGAC	1 cut(s)	1454
FatI	CATG	9 cut(s)	269, 1135, 1587, 2058, 2380, 2395, 2507, 2550, 2709
FbaI	TGATCA	2 cut(s)	37, 489
FblI	GTMKAC	1 cut(s)	1621
FokI	GGATG	8 cut(s)	116, 560, 695, 817, 983, 1614, 2098, 2258
FriOI	GRGCYC	1 cut(s)	996
FspBI	CTAG	4 cut(s)	639, 866, 1514, 2738
FspI	TGCGCA	1 cut(s)	1280
GlaI	GCGC	3 cut(s)	864, 1280, 1953
GsaI	CCCAGC	1 cut(s)	777
GsuI	CTGGAG	2 cut(s)	1284, 2162
HaeII	RGCGCY	1 cut(s)	1955
HaeIII	GGCC	1 cut(s)	1452
HapII	CCGG	3 cut(s)	208, 538, 2576
HgaI	GACGC	3 cut(s)	193, 1338, 2669
HhaI	GCGC	3 cut(s)	865, 1281, 1954
Hin1I	GRCGYC	1 cut(s)	1952
Hin1II	CATG	9 cut(s)	273, 1139, 1591, 2062, 2384, 2399, 2511, 2554, 2713
Hin6I	GCGC	3 cut(s)	863, 1279, 1952
HinP1I	GCGC	3 cut(s)	863, 1279, 1952
HincII	GTYRAC	1 cut(s)	1901
HindII	GTYRAC	1 cut(s)	1901
HindIII	AAGCTT	2 cut(s)	955, 1697
HinfI	GANTC	9 cut(s)	838, 884, 1049, 1102, 1415, 1645, 1729, 1743, 1939
HpaII	CCGG	3 cut(s)	208, 538, 2576
HphI	GGTGA	4 cut(s)	454, 1439, 1472, 2573
Hpy166II	GTNNAC	6 cut(s)	1622, 1901, 2469, 2480, 2513, 2547
Hpy8I	GTNNAC	6 cut(s)	1622, 1901, 2469, 2480, 2513, 2547
Hpy99I	CGWCG	2 cut(s)	82, 855
HpyAV	CCTTC	8 cut(s)	67, 311, 1666, 2164, 2316, 2656, 2698, 2903
HpyCH4III	ACNGT	5 cut(s)	52, 89, 1193, 1540, 2618
HpyCH4IV	ACGT	2 cut(s)	2075, 2471
HpyF10VI	GCNNNNNNNGC	8 cut(s)	187, 869, 935, 954, 1346, 1732, 2194, 2452
HpyF3I	CTNAG	7 cut(s)	348, 886, 1456, 2003, 2328, 2700, 2793
HpySE526I	ACGT	2 cut(s)	2075, 2471
Hsp92I	GRCGYC	1 cut(s)	1952
Hsp92II	CATG	9 cut(s)	273, 1139, 1591, 2062, 2384, 2399, 2511, 2554, 2713
HspAI	GCGC	3 cut(s)	863, 1279, 1952
KasI	GGCGCC	1 cut(s)	1951
KpnI	GGTACC	1 cut(s)	2576
Ksp22I	TGATCA	2 cut(s)	37, 489
LguI	GCTCTTC	2 cut(s)	621, 1645
LmnI	GCTCC	7 cut(s)	808, 991, 1303, 2108, 2143, 2341, 2433
LweI	GCATC	9 cut(s)	132, 538, 640, 691, 961, 1020, 1796, 2120, 2287
MaeI	CTAG	4 cut(s)	639, 866, 1514, 2738
MaeII	ACGT	2 cut(s)	2075, 2471
MaeIII	GTNAC	9 cut(s)	358, 417, 1540, 1802, 2029, 2071, 2234, 2657, 2853
MfeI	CAATTG	4 cut(s)	264, 422, 1818, 2147
MflI	RGATCY	4 cut(s)	1170, 1777, 2318, 2785
MhlI	GDGCHC	2 cut(s)	50, 996
Mly113I	GGCGCC	1 cut(s)	1952
MlyI	GAGTC	7 cut(s)	847, 878, 1424, 1654, 1738, 1752, 1933
MmeI	TCCRAC	1 cut(s)	1026
Mph1103I	ATGCAT	2 cut(s)	1408, 2302
MroXI	GAANNNNTTC	2 cut(s)	1158, 2253
MslI	CAYNNNNRTG	2 cut(s)	1586, 1632
MspA1I	CMGCKG	2 cut(s)	773, 1129
MspCI	CTTAAG	1 cut(s)	2869
MspI	CCGG	3 cut(s)	208, 538, 2576
MspR9I	CCNGG	5 cut(s)	356, 538, 539, 2316, 2577
MunI	CAATTG	4 cut(s)	264, 422, 1818, 2147
Mva1269I	GAATGC	3 cut(s)	475, 950, 2300
MvaI	CCWGG	2 cut(s)	356, 2316
MwoI	GCNNNNNNNGC	8 cut(s)	187, 869, 935, 954, 1346, 1732, 2194, 2452
NarI	GGCGCC	1 cut(s)	1952
NciI	CCSGG	3 cut(s)	538, 539, 2577
NlaIII	CATG	9 cut(s)	273, 1139, 1591, 2062, 2384, 2399, 2511, 2554, 2713
NlaIV	GGNNCC	9 cut(s)	49, 810, 1470, 1493, 1851, 1953, 2320, 2574, 2891
NmuCI	GTSAC	5 cut(s)	417, 1802, 2234, 2657, 2853
NsbI	TGCGCA	1 cut(s)	1280
NsiI	ATGCAT	2 cut(s)	1408, 2302
NspI	RCATGY	2 cut(s)	273, 2511
NspV	TTCGAA	1 cut(s)	149
PacI	TTAATTAA	1 cut(s)	2535
PciSI	GCTCTTC	2 cut(s)	621, 1645
PctI	GAATGC	3 cut(s)	475, 950, 2300
PdmI	GAANNNNTTC	2 cut(s)	1158, 2253
PfeI	GAWTC	2 cut(s)	1049, 1102
PflFI	GACNNNGTC	1 cut(s)	1742
PflMI	CCANNNNNTGG	1 cut(s)	2788
PleI	GAGTC	7 cut(s)	846, 878, 1423, 1653, 1737, 1751, 1933
PluTI	GGCGCC	1 cut(s)	1955
PpsI	GAGTC	7 cut(s)	846, 878, 1423, 1653, 1737, 1751, 1933
PpuMI	RGGWCCY	3 cut(s)	320, 352, 2312
PshBI	ATTAAT	3 cut(s)	1829, 1995, 2531
PsiI	TTATAA	3 cut(s)	332, 1922, 2594
Psp124BI	GAGCTC	1 cut(s)	996
Psp5II	RGGWCCY	3 cut(s)	320, 352, 2312
Psp6I	CCWGG	2 cut(s)	354, 2314
PspFI	CCCAGC	1 cut(s)	773
PspGI	CCWGG	2 cut(s)	354, 2314
PspN4I	GGNNCC	9 cut(s)	49, 810, 1470, 1493, 1851, 1953, 2320, 2574, 2891
PspPI	GGNCC	5 cut(s)	205, 320, 352, 1468, 2312
PspPPI	RGGWCCY	3 cut(s)	320, 352, 2312
PsrI	GAACNNNNNNTAC	2 cut(s)	2353, 2385
PstI	CTGCAG	2 cut(s)	772, 1728
PstNI	CAGNNNCTG	4 cut(s)	187, 355, 1732, 2315
PsuI	RGATCY	4 cut(s)	1170, 1777, 2318, 2785
PsyI	GACNNNGTC	1 cut(s)	1742
PvuII	CAGCTG	2 cut(s)	773, 1129
RseI	CAYNNNNRTG	2 cut(s)	1586, 1632
SacI	GAGCTC	1 cut(s)	996
SapI	GCTCTTC	2 cut(s)	621, 1645
Sau96I	GGNCC	5 cut(s)	205, 320, 352, 1468, 2312
SchI	GAGTC	7 cut(s)	847, 878, 1424, 1654, 1738, 1752, 1933
ScrFI	CCNGG	5 cut(s)	356, 538, 539, 2316, 2577
SduI	GDGCHC	2 cut(s)	50, 996
SfaNI	GCATC	9 cut(s)	132, 538, 640, 691, 961, 1020, 1796, 2120, 2287
SfcI	CTRYAG	2 cut(s)	768, 1724
SfoI	GGCGCC	1 cut(s)	1953
SfuI	TTCGAA	1 cut(s)	149
SinI	GGWCC	5 cut(s)	205, 320, 352, 1468, 2312
SmaI	CCCGGG	1 cut(s)	539
SmiMI	CAYNNNNRTG	2 cut(s)	1586, 1632
SmlI	CTYRAG	2 cut(s)	11, 2869
SmoI	CTYRAG	2 cut(s)	11, 2869
SsiI	CCGC	3 cut(s)	812, 929, 1174
SspDI	GGCGCC	1 cut(s)	1951
SspI	AATATT	3 cut(s)	1720, 1972, 2801
SspMI	CTAG	4 cut(s)	639, 866, 1514, 2738
SstI	GAGCTC	1 cut(s)	996
StyD4I	CCNGG	5 cut(s)	354, 536, 537, 2314, 2575
StyI	CCWWGG	1 cut(s)	873
TaaI	ACNGT	5 cut(s)	52, 89, 1193, 1540, 2618
TaiI	ACGT	2 cut(s)	2078, 2474
TaqI	TCGA	7 cut(s)	149, 375, 853, 1648, 1908, 2649, 2753
TatI	WGTACW	4 cut(s)	1561, 2512, 2625, 2692
TauI	GCSGC	1 cut(s)	814
TfiI	GAWTC	2 cut(s)	1049, 1102
TscAI	CASTG	6 cut(s)	534, 569, 795, 1453, 2023, 2145
TseFI	GTSAC	5 cut(s)	417, 1802, 2234, 2657, 2853
Tsp45I	GTSAC	5 cut(s)	417, 1802, 2234, 2657, 2853
TspGWI	ACGGA	4 cut(s)	95, 839, 1006, 2104
TspMI	CCCGGG	1 cut(s)	537
TspRI	CASTG	6 cut(s)	534, 569, 795, 1453, 2023, 2145
Tth111I	GACNNNGTC	1 cut(s)	1742
Van91I	CCANNNNNTGG	1 cut(s)	2788
Vha464I	CTTAAG	1 cut(s)	2869
VpaK11BI	GGWCC	5 cut(s)	205, 320, 352, 1468, 2312
VspI	ATTAAT	3 cut(s)	1829, 1995, 2531
XagI	CCTNNNNNAGG	2 cut(s)	2049, 2132
XapI	RAATTY	2 cut(s)	151, 961
XceI	RCATGY	2 cut(s)	273, 2511
XmaI	CCCGGG	1 cut(s)	537
XmiI	GTMKAC	1 cut(s)	1621
XmnI	GAANNNNTTC	2 cut(s)	1158, 2253
XspI	CTAG	4 cut(s)	639, 866, 1514, 2738
Zsp2I	ATGCAT	2 cut(s)	1408, 2302

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.