MD09G1215200.v1.1

NatA auxiliary

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr09
OG0012120
Physical Location & Seq
Forward (+)
21247872 .. 21260020
12149 bp
Loading structure...
UTR
Exon/CDS
Intron
MD09G1215200.v1.1.491

Sequence Viewer

Length: 2697 bp
ATGGGTGCCTCACTCCCCCCCAAAGAGGCCAACCTCTTCAAGCTCATCGTCAAATCATATGAAACTAAACAATATAAGAAGGGACTGAAGGCAGCAGATGCCATATTGAAAAAGTTTCCAGACCATGGAGAAACTTTATCAATGAAGGGATTAACATTAAATTGCATGGACCGCAAATCTGAAGCATATGAACTTGTCCGGATAGGACTCAAGAATGACCTCAAAAGTCATGTTTGCTGGCATGTTTATGGTCTTCTTTACCGGTCAGACAGAGAATACAGGGAGGCAATAAAATGCTACAGAAATGCTCTGAGGATAGATCCAGACAATATTGAAATACTACGGGATCTGTCACTCCTACAGGCTCAAATGCGGGATTTGACTGGTTTTGTTGAGACAAGACAGCAACTTCTGACTTTGAAACCAAATCATCGCATGAATTGGATTGGCTTTGCTGTTTCCCATCATTTAAATTCAAATGCTTTAAAAGCTGTTGAAATCCTGGAAGCATATGAAGGGACTCTTGAAGATGATTACCCTCCAGATAATGAGCGTTGTGAGCATGGGGAGATGCTTTTATATAAGATTTCGTTGTTGGAGGAATGTAGCTTAATTGAGAGAGCTCTTGAGGAGTTGCACAAGAAAGAGTTGAGAATTGTTGATAAGTTAGACTATAAAGAGCAAGAGGTTTCTCTTTTGGTGAAGCTTGGTCACCTAGAAGAAGGTGGTAAATTGTATAGGGTATTGCTTTCCATGAATCCCGACAACTATGGATATTATCAAGGCCTGCAAAAATGTCTTGGGCTGTATGCAGAGAATGGCCAGTATTCCCCTGATGAAATCAAACGCTTGGATACCTTGTACAAATCCCTTGCGCAGAAATACAATTGGTCGTCTGCCGTTAAGAGAATTCCACTTGATTTCTTACAAGGTGACAAATTTCGAGAAGCAGCAGATAATTATATCAGGCCTCTCCTTACTAAGGGAGTTCCTTCATTATTCTCCGATCTTTCTCCTCTGTATGATCACCCTGGAAAGGCAGACATTCTGGAACAACTTATTCTTGAGTTGGAACATTCTGTTTGTACGACTGGTCGATACCCTGGGAGGGAAGATAAGGAGCCCCCTTCGACACTTTTGTGGGCCTTGTTTTTGTTGGCTCAGCATTATGATAGACGAGGTCAATATGACATGGCTCTATCTAAAATTGATGAGGCCATACAGCACACTCCAACTGTGATTGATTTATACTCTGCAAAGAGTCGGGTTTTGAAGCATGCTGGTGATTTGCCTGCTGCTGCTGCACTGGCAGATGAAGCTAGATGCATGGATCTTGCAGATCGTTATATAAATAGTGACTGCGTTAAGCGTATGCTGCAGGCTGATCAGGTTCCTTTGGCAGATAGAACTGCTGTATTGTTCACAAAAGATGGTGATCAGCACAACAACCTTCATGATATGCAGTGCATGTGGTATGAACTTGCTTCTGGTGAGAGTTATTTCCGCCAAGGTGATCTTGGACGAGCCTTGAAAAGATTTTTAGGTGTGGAGAAGCACTATGCTGATATTACAGAAGATCAGTTTGACTTCCATTCTTATTGCTTAAGGAAAATGACGCTGCGGGCCTATGTTGAAATGCTTAAATTTCAAGATCGGTTGCATTCACATGCATATTTTCACAAAGCAGCGGTTGGTGCAATCAGATGCTATTTGAAGCTGTATGATACTCCTTTGAAATCTACATCCGAAGAAGATGATGAGATGTCTAAGTTGCCCTCTTCTCAGAAAAAGAAGCTGAGGCAAAAACAGAGAAAGGCAGAAGCACGAGCTAAGAAGGAGGCAGAGGGGAAAAATGAAGAATCTAATGCAGGTGGTGTTTCTAAGTCTGGGAAACGACATGTAAAGCCTGTCGACCCTGATCCGCATGGGGAGAAGTTGTTGCAGGTTGAGGATCCCATGTTAGAAGCTACTAAGTACTTGAAACTGCTTCAGAAGAACTCGCCCGAGTCCTTGGAGACACACTTGCTTTCTTTTGAAGTAAATATGAGGAAGCAGAAGATTTTGCTTGCCTTTCAGGCTTTGAAGCAGCTTCTGAGGTTAAATGCTGAACACCCAGACTCACATCGCTCCTTGATTAAATTCTTCCATAAAGTGGCTTCAATGCCAGCTCCTGTGACTGATAGTGAGAAACTCGTTTGGAGTGTCTTGGAAGCTGAGCGCCCAATGATCAGTCAATTGCAGAATAAATCTTTGGTGGAGGCAAACAAGAATTTCTTGGAGAAACATCAAGATTCTTTGATGCATAGAGCTGCAGTTGCAGAAATGCTATATGCTCTGGAACCTCACAAGAAATCTGAGGCTATTAAATTAATAGAAGAGTCGACCAACAATATGGTTCCCAAAAATGGAGCACTTGGACCTGTCGGAGAGTGGACACTCAAAGATTGTATTACTGTCAGCAAACTCCTTGAAACAATTGTTGGTGACCCTGCGGCTGCTTTGAGATGGAAAGGGCGATGTGCCGAGTACTTCCCTTACTCAACATACTTTGAAGGTAAATGTAGCTCTGCTGTACCCAACTCAGCATACAACCAAAAGGGAAGGGCGAAACATTCGGAAGAGCAGCATCCAAGTGCAGATTCCATTGCAGTAAATGGAAAATTAGAGGCCTTCAAAGGCCTCAGTGTCCAATCATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
NARP1 TPR_2 TPR_8

Protein Analysis

899

Amino Acids

102.45

Weight (kDa)

7.38

Isoelectric Point (pI)

37.18

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
TPR_2 PF07719 79 - 110 8.4e-06 Tetratricopeptide repeat
TPR_1 PF00515 84 - 110 9.6e-06 Tetratricopeptide repeat
TPR_11 PF13414 84 - 123 6.7e-07 TPR repeat
NatA_aux_su PF12569 187 - 696 2e-200 N-terminal acetyltransferase A, auxiliary subunit
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Orthologous Genes (Group: OG0012120)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G80410 AT1G80410
fragaria_vesca FvH4_6g30900 FvH4_6g30900
malus_domestica MD09G1215200.v1.1 MD17G1197900.v1.1
prunus_persica Prupe.3G074300_v2.0.a1
pyrus_communis pycom09g13200 pycom17g20280
rosa_chinensis RchiOBHm_Chr2g0137391
rosa_laevigata RLG00000019656
rosa_multiflora Rmu_ssc0000312.1_g000014
rosa_roxburghii Rroxscaffold_2G00107080
rosa_rugosa Rorug02G0342200
rosa_samantha Rh2AG390300 Rh2BG397700 Rh2CG377600 Rh2DG413000
rosa_wichuraiana Rw2G031980

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 1859
Acc16I TGCGCA 1 cut(s) 876
Acc36I ACCTGC 2 cut(s) 1859, 1933
AccB1I GGYRCC 1 cut(s) 5
AccB7I CCANNNNNTGG 2 cut(s) 125, 2152
AccI GTMKAC 2 cut(s) 1911, 2381
AccIII TCCGGA 1 cut(s) 198
AciI CCGC 7 cut(s) 172, 373, 1504, 1621, 1688, 1922, 2492
AclWI GGATC 6 cut(s) 314, 354, 1338, 1913, 1946, 1959
AcoI YGGCCR 1 cut(s) 820
AcsI RAATTY 6 cut(s) 472, 909, 938, 1643, 2138, 2269
AcuI CTGAAG 3 cut(s) 107, 201, 1973
AfaI GTAC 5 cut(s) 863, 1087, 1976, 2528, 2574
AfiI CCNNNNNNNGG 7 cut(s) 25, 125, 982, 1036, 1108, 2152, 2405
AflII CTTAAG 1 cut(s) 1603
AflIII ACRYGT 1 cut(s) 1897
AgeI ACCGGT 1 cut(s) 261
AjnI CCWGG 3 cut(s) 501, 1030, 1102
AjuI GAANNNNNNNTTGG 6 cut(s) 2234, 2266, 2463, 2495, 2623, 2655
AleI CACNNNNGTG 1 cut(s) 1138
Alw21I GWGCWC 2 cut(s) 625, 2413
Alw26I GTCTC 2 cut(s) 389, 2009
AlwI GGATC 6 cut(s) 314, 354, 1338, 1913, 1946, 1959
AlwNI CAGNNNCTG 2 cut(s) 2092, 2171
Ama87I CYCGRG 1 cut(s) 2003
Aor13HI TCCGGA 1 cut(s) 198
AoxI GGCC 9 cut(s) 27, 784, 820, 968, 1143, 1215, 1623, 2667, 2677
ApoI RAATTY 6 cut(s) 472, 909, 938, 1643, 2138, 2269
AseI ATTAAT 1 cut(s) 2369
AsiGI ACCGGT 1 cut(s) 261
AspLEI GCGC 2 cut(s) 877, 2220
AspS9I GGNCC 4 cut(s) 169, 1143, 1623, 2417
AsuHPI GGTGA 9 cut(s) 704, 712, 944, 1019, 1295, 1445, 1502, 1523, 2495
AvaI CYCGRG 1 cut(s) 2003
AvaII GGWCC 2 cut(s) 169, 2417
BalI TGGCCA 1 cut(s) 822
BamHI GGATCC 1 cut(s) 1951
BanI GGYRCC 1 cut(s) 5
BanII GRGCYC 2 cut(s) 625, 1125
BauI CACGAG 1 cut(s) 1824
BbsI GAAGAC 1 cut(s) 245
Bbv12I GWGCWC 2 cut(s) 625, 2413
BbvCI CCTCAGC 1 cut(s) 1796
BccI CCATC 3 cut(s) 471, 1424, 2499
BceAI ACGGC 1 cut(s) 884
BciT130I CCWGG 3 cut(s) 503, 1032, 1104
BciVI GTATCC 1 cut(s) 847
BclI TGATCA 4 cut(s) 1024, 1384, 1435, 2226
BcoDI GTCTC 2 cut(s) 389, 2009
BfaI CTAG 2 cut(s) 716, 1320
BfmI CTRYAG 4 cut(s) 298, 359, 1376, 2310
BfoI RGCGCY 1 cut(s) 2221
BfrI CTTAAG 1 cut(s) 1603
BfuAI ACCTGC 2 cut(s) 1859, 1933
BfuI GTATCC 1 cut(s) 847
BglI GCCNNNNNGGC 1 cut(s) 2075
BlpI GCTNAGC 2 cut(s) 1161, 2214
BmcAI AGTACT 2 cut(s) 1976, 2528
Bme1390I CCNGG 3 cut(s) 503, 1032, 1104
Bme18I GGWCC 2 cut(s) 169, 2417
BmeT110I CYCGRG 1 cut(s) 2003
BmgT120I GGNCC 4 cut(s) 169, 1143, 1623, 2417
BmiI GGNNCC 6 cut(s) 7, 1122, 1392, 1953, 2340, 2397
BmrFI CCNGG 3 cut(s) 503, 1032, 1104
BmsI GCATC 6 cut(s) 88, 561, 1313, 1694, 2289, 2635
BpiI GAAGAC 1 cut(s) 245
BpmI CTGGAG 1 cut(s) 525
Bpu10I CCTNAGC 1 cut(s) 1796
Bpu1102I GCTNAGC 2 cut(s) 1161, 2214
BpuEI CTTGAG 3 cut(s) 194, 647, 1085
BsaBI GATNNNNATC 1 cut(s) 1434
BsaJI CCNNGG 6 cut(s) 124, 1030, 1102, 1103, 1507, 2010
BsaWI WCCGGW 2 cut(s) 198, 261
BsaXI ACNNNNNCTCC 2 cut(s) 1922, 1952
Bsc4I CCNNNNNNNGG 7 cut(s) 25, 125, 982, 1036, 1108, 2152, 2405
Bse118I RCCGGY 1 cut(s) 261
Bse1I ACTGG 4 cut(s) 388, 823, 1096, 1311
Bse3DI GCAATG 1 cut(s) 2643
Bse8I GATNNNNATC 1 cut(s) 1434
BseAI TCCGGA 1 cut(s) 198
BseBI CCWGG 3 cut(s) 503, 1032, 1104
BseDI CCNNGG 6 cut(s) 124, 1030, 1102, 1103, 1507, 2010
BseGI GGATG 2 cut(s) 1742, 2626
BseJI GATNNNNATC 1 cut(s) 1434
BseLI CCNNNNNNNGG 7 cut(s) 25, 125, 982, 1036, 1108, 2152, 2405
BseMI GCAATG 1 cut(s) 2643
BseMII CTCAG 9 cut(s) 302, 1175, 1787, 1796, 2084, 2205, 2346, 2595, 2695
BseNI ACTGG 4 cut(s) 388, 823, 1096, 1311
BseRI GAGGAG 2 cut(s) 644, 1005
BsgI GTGCAG 2 cut(s) 1287, 2655
BshFI GGCC 9 cut(s) 29, 786, 822, 970, 1145, 1217, 1625, 2669, 2679
BshNI GGYRCC 1 cut(s) 5
BshTI ACCGGT 1 cut(s) 261
BsiHKAI GWGCWC 2 cut(s) 625, 2413
BsiHKCI CYCGRG 1 cut(s) 2003
BsiSI CCGG 2 cut(s) 199, 262
BslFI GGGAC 2 cut(s) 96, 532
BslI CCNNNNNNNGG 7 cut(s) 25, 125, 982, 1036, 1108, 2152, 2405
BsmAI GTCTC 2 cut(s) 389, 2009
BsmFI GGGAC 2 cut(s) 96, 532
BsmI GAATGC 1 cut(s) 1660
BsnI GGCC 9 cut(s) 29, 786, 822, 970, 1145, 1217, 1625, 2669, 2679
BsoBI CYCGRG 1 cut(s) 2003
Bsp1286I GDGCHC 3 cut(s) 625, 1125, 2413
Bsp13I TCCGGA 1 cut(s) 198
Bsp1407I TGTACA 1 cut(s) 861
Bsp1720I GCTNAGC 2 cut(s) 1161, 2214
Bsp19I CCATGG 1 cut(s) 124
BspACI CCGC 7 cut(s) 172, 373, 1504, 1621, 1688, 1922, 2492
BspANI GGCC 9 cut(s) 29, 786, 822, 970, 1145, 1217, 1625, 2669, 2679
BspCNI CTCAG 9 cut(s) 303, 1174, 1788, 1795, 2085, 2206, 2347, 2594, 2694
BspEI TCCGGA 1 cut(s) 198
BspHI TCATGA 2 cut(s) 1453, 2693
BspLI GGNNCC 6 cut(s) 7, 1122, 1392, 1953, 2340, 2397
BspMAI CTGCAG 2 cut(s) 1380, 2314
BspMI ACCTGC 2 cut(s) 1859, 1933
BspPI GGATC 6 cut(s) 314, 354, 1338, 1913, 1946, 1959
BspQI GCTCTTC 1 cut(s) 2613
BspT107I GGYRCC 1 cut(s) 5
BspTI CTTAAG 1 cut(s) 1603
BsrDI GCAATG 1 cut(s) 2643
BsrFI RCCGGY 1 cut(s) 261
BsrGI TGTACA 1 cut(s) 861
BsrI ACTGG 4 cut(s) 388, 823, 1096, 1311
BssAI RCCGGY 1 cut(s) 261
BssECI CCNNGG 6 cut(s) 124, 1030, 1102, 1103, 1507, 2010
BssSI CACGAG 1 cut(s) 1824
BssT1I CCWWGG 3 cut(s) 124, 1507, 2010
Bst2BI CACGAG 1 cut(s) 1824
Bst2UI CCWGG 3 cut(s) 503, 1032, 1104
Bst4CI ACNGT 2 cut(s) 1237, 2455
Bst6I CTCTTC 4 cut(s) 41, 1783, 2370, 2613
BstAFI CTTAAG 1 cut(s) 1603
BstAPI GCANNNNNTGC 1 cut(s) 98
BstAUI TGTACA 1 cut(s) 861
BstC8I GCNNGC 8 cut(s) 239, 788, 1278, 1293, 1380, 1623, 2067, 2166
BstDSI CCRYGG 1 cut(s) 124
BstEII GGTNACC 2 cut(s) 710, 2483
BstENI CCTNNNNNAGG 1 cut(s) 980
BstF5I GGATG 2 cut(s) 1742, 2626
BstH2I RGCGCY 1 cut(s) 2221
BstHHI GCGC 2 cut(s) 877, 2220
BstMAI GTCTC 2 cut(s) 389, 2009
BstNI CCWGG 3 cut(s) 503, 1032, 1104
BstNSI RCATGY 5 cut(s) 245, 1280, 1471, 1670, 1901
BstPI GGTNACC 2 cut(s) 710, 2483
BstSCI CCNGG 3 cut(s) 501, 1030, 1102
BstSFI CTRYAG 4 cut(s) 298, 359, 1376, 2310
BstV2I GAAGAC 1 cut(s) 245
BstX2I RGATCY 4 cut(s) 319, 346, 1330, 1951
BstXI CCANNNNNNTGG 1 cut(s) 2392
BstYI RGATCY 4 cut(s) 319, 346, 1330, 1951
BsuI GTATCC 1 cut(s) 847
BsuRI GGCC 9 cut(s) 29, 786, 822, 970, 1145, 1217, 1625, 2669, 2679
BtgI CCRYGG 1 cut(s) 124
BtgZI GCGATG 3 cut(s) 416, 2108, 2530
BtsCI GGATG 2 cut(s) 1742, 2626
BtsI GCAGTG 1 cut(s) 1469
BtsIMutI CAGTG 3 cut(s) 1304, 1469, 2689
BveI ACCTGC 2 cut(s) 1859, 1933
Cac8I GCNNGC 8 cut(s) 239, 788, 1278, 1293, 1380, 1623, 2067, 2166
CaiI CAGNNNCTG 2 cut(s) 2092, 2171
CciI TCATGA 2 cut(s) 1453, 2693
CfoI GCGC 2 cut(s) 877, 2220
Cfr10I RCCGGY 1 cut(s) 261
Cfr13I GGNCC 4 cut(s) 169, 1143, 1623, 2417
CseI GACGC 1 cut(s) 1624
Csp6I GTAC 5 cut(s) 862, 1086, 1975, 2527, 2573
CspAI ACCGGT 1 cut(s) 261
CviQI GTAC 5 cut(s) 862, 1086, 1975, 2527, 2573
DraI TTTAAA 2 cut(s) 471, 486
EaeI YGGCCR 1 cut(s) 820
Eam1104I CTCTTC 4 cut(s) 41, 1783, 2370, 2613
EarI CTCTTC 4 cut(s) 41, 1783, 2370, 2613
EciI GGCGGA 1 cut(s) 1493
Ecl136II GAGCTC 1 cut(s) 623
Eco130I CCWWGG 3 cut(s) 124, 1507, 2010
Eco147I AGGCCT 4 cut(s) 786, 970, 2669, 2679
Eco24I GRGCYC 2 cut(s) 625, 1125
Eco47I GGWCC 2 cut(s) 169, 2417
Eco53kI GAGCTC 1 cut(s) 623
Eco57I CTGAAG 3 cut(s) 107, 201, 1973
Eco88I CYCGRG 1 cut(s) 2003
Eco91I GGTNACC 2 cut(s) 710, 2483
EcoICRI GAGCTC 1 cut(s) 623
EcoNI CCTNNNNNAGG 1 cut(s) 980
EcoO65I GGTNACC 2 cut(s) 710, 2483
EcoRI GAATTC 1 cut(s) 909
EcoRII CCWGG 3 cut(s) 501, 1030, 1102
EcoT14I CCWWGG 3 cut(s) 124, 1507, 2010
EcoT22I ATGCAT 3 cut(s) 1328, 1672, 2304
EcoT38I GRGCYC 2 cut(s) 625, 1125
ErhI CCWWGG 3 cut(s) 124, 1507, 2010
FalI AAGNNNNNCTT 6 cut(s) 507, 539, 1500, 1532, 2258, 2290
FaqI GGGAC 2 cut(s) 96, 532
FauI CCCGC 2 cut(s) 366, 1614
FauNDI CATATG 3 cut(s) 58, 187, 511
FbaI TGATCA 4 cut(s) 1024, 1384, 1435, 2226
FblI GTMKAC 2 cut(s) 1911, 2381
FokI GGATG 2 cut(s) 1729, 2613
FriOI GRGCYC 2 cut(s) 625, 1125
FspBI CTAG 2 cut(s) 716, 1320
FspI TGCGCA 1 cut(s) 876
GlaI GCGC 2 cut(s) 876, 2219
GsuI CTGGAG 1 cut(s) 525
HaeII RGCGCY 1 cut(s) 2221
HaeIII GGCC 9 cut(s) 29, 786, 822, 970, 1145, 1217, 1625, 2669, 2679
HapII CCGG 2 cut(s) 199, 262
HgaI GACGC 1 cut(s) 1624
HhaI GCGC 2 cut(s) 877, 2220
Hin6I GCGC 2 cut(s) 875, 2218
HinP1I GCGC 2 cut(s) 875, 2218
HincII GTYRAC 2 cut(s) 1912, 2382
HindII GTYRAC 2 cut(s) 1912, 2382
HindIII AAGCTT 1 cut(s) 704
HpaII CCGG 2 cut(s) 199, 262
HphI GGTGA 9 cut(s) 704, 712, 944, 1019, 1295, 1445, 1502, 1523, 2495
Hpy166II GTNNAC 4 cut(s) 1422, 1912, 2382, 2433
Hpy8I GTNNAC 4 cut(s) 1422, 1912, 2382, 2433
HpyCH4III ACNGT 2 cut(s) 1237, 2455
HspAI GCGC 2 cut(s) 875, 2218
Kpn2I TCCGGA 1 cut(s) 198
Ksp22I TGATCA 4 cut(s) 1024, 1384, 1435, 2226
LguI GCTCTTC 1 cut(s) 2613
LmnI GCTCC 4 cut(s) 1120, 2132, 2173, 2408
LweI GCATC 6 cut(s) 88, 561, 1313, 1694, 2289, 2635
MaeI CTAG 2 cut(s) 716, 1320
MaeIII GTNAC 6 cut(s) 351, 710, 932, 1355, 2173, 2483
MfeI CAATTG 3 cut(s) 886, 2234, 2475
MflI RGATCY 4 cut(s) 319, 346, 1330, 1951
MhlI GDGCHC 3 cut(s) 625, 1125, 2413
MlsI TGGCCA 1 cut(s) 822
MluNI TGGCCA 1 cut(s) 822
MlyI GAGTC 6 cut(s) 201, 514, 1270, 2015, 2111, 2387
MmeI TCCRAC 4 cut(s) 576, 1050, 1256, 2404
Mox20I TGGCCA 1 cut(s) 822
Mph1103I ATGCAT 3 cut(s) 1328, 1672, 2304
MroI TCCGGA 1 cut(s) 198
MscI TGGCCA 1 cut(s) 822
MslI CAYNNNNRTG 5 cut(s) 246, 1138, 1281, 1665, 2631
Msp20I TGGCCA 1 cut(s) 822
MspA1I CMGCKG 1 cut(s) 1688
MspCI CTTAAG 1 cut(s) 1603
MspI CCGG 2 cut(s) 199, 262
MspR9I CCNGG 3 cut(s) 503, 1032, 1104
MunI CAATTG 3 cut(s) 886, 2234, 2475
Mva1269I GAATGC 1 cut(s) 1660
MvaI CCWGG 3 cut(s) 503, 1032, 1104
NcoI CCATGG 1 cut(s) 124
NdeI CATATG 3 cut(s) 58, 187, 511
NlaIV GGNNCC 6 cut(s) 7, 1122, 1392, 1953, 2340, 2397
NmeAIII GCCGAG 1 cut(s) 2548
NmuCI GTSAC 6 cut(s) 351, 710, 932, 1355, 2173, 2483
NsbI TGCGCA 1 cut(s) 876
NsiI ATGCAT 3 cut(s) 1328, 1672, 2304
NspI RCATGY 5 cut(s) 245, 1280, 1471, 1670, 1901
OliI CACNNNNGTG 1 cut(s) 1138
PaeI GCATGC 1 cut(s) 1280
PagI TCATGA 2 cut(s) 1453, 2693
PaqCI CACCTGC 1 cut(s) 1859
PasI CCCWGGG 1 cut(s) 1103
PceI AGGCCT 4 cut(s) 786, 970, 2669, 2679
PciI ACATGT 1 cut(s) 1897
PciSI GCTCTTC 1 cut(s) 2613
PctI GAATGC 1 cut(s) 1660
PfeI GAWTC 4 cut(s) 757, 1859, 2291, 2639
PflFI GACNNNGTC 1 cut(s) 1179
PflMI CCANNNNNTGG 2 cut(s) 125, 2152
PfoI TCCNGGA 1 cut(s) 501
PinAI ACCGGT 1 cut(s) 261
PleI GAGTC 6 cut(s) 201, 514, 1269, 2014, 2111, 2386
PpsI GAGTC 6 cut(s) 201, 514, 1269, 2014, 2111, 2386
PscI ACATGT 1 cut(s) 1897
PshBI ATTAAT 1 cut(s) 2369
Psp124BI GAGCTC 1 cut(s) 625
Psp6I CCWGG 3 cut(s) 501, 1030, 1102
PspEI GGTNACC 2 cut(s) 710, 2483
PspGI CCWGG 3 cut(s) 501, 1030, 1102
PspN4I GGNNCC 6 cut(s) 7, 1122, 1392, 1953, 2340, 2397
PspPI GGNCC 4 cut(s) 169, 1143, 1623, 2417
PstI CTGCAG 2 cut(s) 1380, 2314
PstNI CAGNNNCTG 2 cut(s) 2092, 2171
PsuI RGATCY 4 cut(s) 319, 346, 1330, 1951
PsyI GACNNNGTC 1 cut(s) 1179
RsaI GTAC 5 cut(s) 863, 1087, 1976, 2528, 2574
RsaNI GTAC 5 cut(s) 862, 1086, 1975, 2527, 2573
RseI CAYNNNNRTG 5 cut(s) 246, 1138, 1281, 1665, 2631
SacI GAGCTC 1 cut(s) 625
SalI GTCGAC 2 cut(s) 1910, 2380
SapI GCTCTTC 1 cut(s) 2613
Sau96I GGNCC 4 cut(s) 169, 1143, 1623, 2417
ScaI AGTACT 2 cut(s) 1976, 2528
SchI GAGTC 6 cut(s) 201, 514, 1270, 2015, 2111, 2387
ScrFI CCNGG 3 cut(s) 503, 1032, 1104
SduI GDGCHC 3 cut(s) 625, 1125, 2413
SfaNI GCATC 6 cut(s) 88, 561, 1313, 1694, 2289, 2635
SfcI CTRYAG 4 cut(s) 298, 359, 1376, 2310
SinI GGWCC 2 cut(s) 169, 2417
SmiI ATTTAAAT 1 cut(s) 471
SmiMI CAYNNNNRTG 5 cut(s) 246, 1138, 1281, 1665, 2631
SmlI CTYRAG 4 cut(s) 209, 626, 1064, 1603
SmoI CTYRAG 4 cut(s) 209, 626, 1064, 1603
SphI GCATGC 1 cut(s) 1280
SseBI AGGCCT 4 cut(s) 786, 970, 2669, 2679
SsiI CCGC 7 cut(s) 172, 373, 1504, 1621, 1688, 1922, 2492
SspI AATATT 1 cut(s) 331
SspMI CTAG 2 cut(s) 716, 1320
SstI GAGCTC 1 cut(s) 625
StuI AGGCCT 4 cut(s) 786, 970, 2669, 2679
StyD4I CCNGG 3 cut(s) 501, 1030, 1102
StyI CCWWGG 3 cut(s) 124, 1507, 2010
SwaI ATTTAAAT 1 cut(s) 471
TaaI ACNGT 2 cut(s) 1237, 2455
TaqI TCGA 5 cut(s) 943, 1096, 1130, 1911, 2381
TatI WGTACW 3 cut(s) 861, 1974, 2526
TauI GCSGC 1 cut(s) 2495
TfiI GAWTC 4 cut(s) 757, 1859, 2291, 2639
TscAI CASTG 3 cut(s) 1311, 1469, 2689
TseFI GTSAC 6 cut(s) 351, 710, 932, 1355, 2173, 2483
Tsp45I GTSAC 6 cut(s) 351, 710, 932, 1355, 2173, 2483
TspRI CASTG 3 cut(s) 1311, 1469, 2689
Tth111I GACNNNGTC 1 cut(s) 1179
Van91I CCANNNNNTGG 2 cut(s) 125, 2152
Vha464I CTTAAG 1 cut(s) 1603
VpaK11BI GGWCC 2 cut(s) 169, 2417
VspI ATTAAT 1 cut(s) 2369
XagI CCTNNNNNAGG 1 cut(s) 980
XapI RAATTY 6 cut(s) 472, 909, 938, 1643, 2138, 2269
XceI RCATGY 5 cut(s) 245, 1280, 1471, 1670, 1901
XcmI CCANNNNNNNNNTGG 1 cut(s) 1514
XmiI GTMKAC 2 cut(s) 1911, 2381
XspI CTAG 2 cut(s) 716, 1320
ZrmI AGTACT 2 cut(s) 1976, 2528
Zsp2I ATGCAT 3 cut(s) 1328, 1672, 2304
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.