NatA auxiliary
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G80410 AT1G80410 |
| fragaria_vesca | FvH4_6g30900 FvH4_6g30900 |
| malus_domestica | MD09G1215200.v1.1 MD17G1197900.v1.1 |
| prunus_persica | Prupe.3G074300_v2.0.a1 |
| pyrus_communis | pycom09g13200 pycom17g20280 |
| rosa_chinensis | RchiOBHm_Chr2g0137391 |
| rosa_laevigata | RLG00000019656 |
| rosa_multiflora | Rmu_ssc0000312.1_g000014 |
| rosa_roxburghii | Rroxscaffold_2G00107080 |
| rosa_rugosa | Rorug02G0342200 |
| rosa_samantha | Rh2AG390300 Rh2BG397700 Rh2CG377600 Rh2DG413000 |
| rosa_wichuraiana | Rw2G031980 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc36I | ACCTGC | 1 cut(s) | 1894 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 86 |
| AccI | GTMKAC | 1 cut(s) | 2115 |
| AccII | CGCG | 1 cut(s) | 906 |
| AccIII | TCCGGA | 3 cut(s) | 159, 502, 2131 |
| AciI | CCGC | 5 cut(s) | 334, 904, 914, 1215, 1257 |
| AclI | AACGTT | 1 cut(s) | 514 |
| AclWI | GGATC | 7 cut(s) | 275, 865, 878, 1299, 1868, 1874, 1907 |
| AcsI | RAATTY | 7 cut(s) | 459, 778, 1496, 1604, 1957, 2099, 2230 |
| AcuI | CTGAAG | 6 cut(s) | 68, 162, 840, 1728, 1934, 2063 |
| AcyI | GRCGYC | 1 cut(s) | 60 |
| AfaI | GTAC | 4 cut(s) | 239, 824, 1937, 2474 |
| AflII | CTTAAG | 2 cut(s) | 1564, 2432 |
| AjiI | CACGTC | 1 cut(s) | 1153 |
| AjnI | CCWGG | 3 cut(s) | 588, 991, 1063 |
| AleI | CACNNNNGTG | 1 cut(s) | 1099 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 1005, 1037 |
| Alw21I | GWGCWC | 3 cut(s) | 586, 1188, 1489 |
| Alw26I | GTCTC | 4 cut(s) | 350, 424, 1970, 2129 |
| AlwI | GGATC | 7 cut(s) | 275, 865, 878, 1299, 1868, 1874, 1907 |
| AlwNI | CAGNNNCTG | 3 cut(s) | 1652, 2041, 2053 |
| Ama87I | CYCGRG | 1 cut(s) | 761 |
| Aor13HI | TCCGGA | 3 cut(s) | 159, 502, 2131 |
| AoxI | GGCC | 4 cut(s) | 929, 1104, 1141, 1176 |
| ApoI | RAATTY | 7 cut(s) | 459, 778, 1496, 1604, 1957, 2099, 2230 |
| AseI | ATTAAT | 1 cut(s) | 2330 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 74 |
| AspLEI | GCGC | 2 cut(s) | 1332, 2181 |
| AspS9I | GGNCC | 2 cut(s) | 130, 1104 |
| AsuHPI | GGTGA | 9 cut(s) | 673, 783, 905, 980, 1060, 1256, 1406, 1463, 1484 |
| AsuNHI | GCTAGC | 1 cut(s) | 2026 |
| AvaI | CYCGRG | 1 cut(s) | 761 |
| AvaII | GGWCC | 1 cut(s) | 130 |
| BamHI | GGATCC | 1 cut(s) | 870 |
| BanII | GRGCYC | 4 cut(s) | 586, 1086, 1489, 2377 |
| BauI | CACGAG | 1 cut(s) | 1785 |
| BbsI | GAAGAC | 2 cut(s) | 846, 1542 |
| Bbv12I | GWGCWC | 3 cut(s) | 586, 1188, 1489 |
| BccI | CCATC | 2 cut(s) | 432, 1385 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 1025, 1059 |
| BciT130I | CCWGG | 3 cut(s) | 590, 993, 1065 |
| BclI | TGATCA | 4 cut(s) | 493, 985, 1345, 1396 |
| BcoDI | GTCTC | 4 cut(s) | 350, 424, 1970, 2129 |
| BfaI | CTAG | 6 cut(s) | 485, 557, 677, 1281, 2027, 2482 |
| BfmI | CTRYAG | 4 cut(s) | 259, 1337, 1869, 2271 |
| BfoI | RGCGCY | 1 cut(s) | 2182 |
| BfrI | CTTAAG | 2 cut(s) | 1564, 2432 |
| BfuAI | ACCTGC | 1 cut(s) | 1894 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 2036 |
| BlpI | GCTNAGC | 1 cut(s) | 1122 |
| BmcAI | AGTACT | 1 cut(s) | 1937 |
| Bme1390I | CCNGG | 3 cut(s) | 590, 993, 1065 |
| Bme18I | GGWCC | 1 cut(s) | 130 |
| BmeT110I | CYCGRG | 1 cut(s) | 761 |
| BmgBI | CACGTC | 1 cut(s) | 1153 |
| BmgT120I | GGNCC | 2 cut(s) | 130, 1104 |
| BmiI | GGNNCC | 6 cut(s) | 872, 1083, 1353, 2301, 2358, 2374 |
| BmrFI | CCNGG | 3 cut(s) | 590, 993, 1065 |
| BmrI | ACTGGG | 1 cut(s) | 778 |
| BmsI | GCATC | 8 cut(s) | 760, 1454, 1655, 2053, 2092, 2112, 2250, 2440 |
| BmtI | GCTAGC | 1 cut(s) | 2030 |
| BmuI | ACTGGG | 1 cut(s) | 778 |
| BpiI | GAAGAC | 2 cut(s) | 846, 1542 |
| BpmI | CTGGAG | 1 cut(s) | 572 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 1122 |
| BpuEI | CTTGAG | 2 cut(s) | 1046, 2387 |
| Bsa29I | ATCGAT | 1 cut(s) | 223 |
| BsaAI | YACGTR | 1 cut(s) | 305 |
| BsaBI | GATNNNNATC | 4 cut(s) | 495, 1395, 1878, 2082 |
| BsaHI | GRCGYC | 1 cut(s) | 60 |
| BsaJI | CCNNGG | 7 cut(s) | 85, 760, 991, 1063, 1064, 1971, 2377 |
| BsaWI | WCCGGW | 3 cut(s) | 159, 502, 2131 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 354, 384, 1883, 1913 |
| Bse1I | ACTGG | 3 cut(s) | 784, 1057, 1540 |
| Bse3DI | GCAATG | 1 cut(s) | 551 |
| Bse8I | GATNNNNATC | 4 cut(s) | 495, 1395, 1878, 2082 |
| BseAI | TCCGGA | 3 cut(s) | 159, 502, 2131 |
| BseBI | CCWGG | 3 cut(s) | 590, 993, 1065 |
| BseCI | ATCGAT | 1 cut(s) | 223 |
| BseDI | CCNNGG | 7 cut(s) | 85, 760, 991, 1063, 1064, 1971, 2377 |
| BseGI | GGATG | 3 cut(s) | 496, 775, 2068 |
| BseJI | GATNNNNATC | 4 cut(s) | 495, 1395, 1878, 2082 |
| BseMI | GCAATG | 1 cut(s) | 551 |
| BseMII | CTCAG | 5 cut(s) | 1136, 1757, 1956, 2045, 2136 |
| BseNI | ACTGG | 3 cut(s) | 784, 1057, 1540 |
| BseRI | GAGGAG | 1 cut(s) | 966 |
| Bsh1236I | CGCG | 1 cut(s) | 906 |
| BshFI | GGCC | 4 cut(s) | 931, 1106, 1143, 1178 |
| BshVI | ATCGAT | 1 cut(s) | 223 |
| BsiHKAI | GWGCWC | 3 cut(s) | 586, 1188, 1489 |
| BsiHKCI | CYCGRG | 1 cut(s) | 761 |
| BsiSI | CCGG | 4 cut(s) | 160, 503, 1465, 2132 |
| BslFI | GGGAC | 1 cut(s) | 298 |
| BsmAI | GTCTC | 4 cut(s) | 350, 424, 1970, 2129 |
| BsmFI | GGGAC | 1 cut(s) | 298 |
| BsmI | GAATGC | 2 cut(s) | 1036, 1621 |
| BsnI | GGCC | 4 cut(s) | 931, 1106, 1143, 1178 |
| BsoBI | CYCGRG | 1 cut(s) | 761 |
| Bsp1286I | GDGCHC | 5 cut(s) | 586, 1086, 1188, 1489, 2377 |
| Bsp13I | TCCGGA | 3 cut(s) | 159, 502, 2131 |
| Bsp1407I | TGTACA | 1 cut(s) | 822 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 1122 |
| Bsp19I | CCATGG | 1 cut(s) | 85 |
| BspACI | CCGC | 5 cut(s) | 334, 904, 914, 1215, 1257 |
| BspANI | GGCC | 4 cut(s) | 931, 1106, 1143, 1178 |
| BspCNI | CTCAG | 5 cut(s) | 1135, 1756, 1957, 2046, 2137 |
| BspDI | ATCGAT | 1 cut(s) | 223 |
| BspEI | TCCGGA | 3 cut(s) | 159, 502, 2131 |
| BspFNI | CGCG | 1 cut(s) | 906 |
| BspHI | TCATGA | 1 cut(s) | 1414 |
| BspLI | GGNNCC | 6 cut(s) | 872, 1083, 1353, 2301, 2358, 2374 |
| BspMAI | CTGCAG | 2 cut(s) | 1341, 2275 |
| BspMI | ACCTGC | 1 cut(s) | 1894 |
| BspOI | GCTAGC | 1 cut(s) | 2030 |
| BspPI | GGATC | 7 cut(s) | 275, 865, 878, 1299, 1868, 1874, 1907 |
| BspTI | CTTAAG | 2 cut(s) | 1564, 2432 |
| BsrDI | GCAATG | 1 cut(s) | 551 |
| BsrGI | TGTACA | 1 cut(s) | 822 |
| BsrI | ACTGG | 3 cut(s) | 784, 1057, 1540 |
| BssECI | CCNNGG | 7 cut(s) | 85, 760, 991, 1063, 1064, 1971, 2377 |
| BssNI | GRCGYC | 1 cut(s) | 60 |
| BssSI | CACGAG | 1 cut(s) | 1785 |
| BssT1I | CCWWGG | 3 cut(s) | 85, 1971, 2377 |
| Bst2BI | CACGAG | 1 cut(s) | 1785 |
| Bst2UI | CCWGG | 3 cut(s) | 590, 993, 1065 |
| Bst4CI | ACNGT | 5 cut(s) | 134, 696, 1198, 1316, 2419 |
| BstACI | GRCGYC | 1 cut(s) | 60 |
| BstAFI | CTTAAG | 2 cut(s) | 1564, 2432 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 1655 |
| BstAUI | TGTACA | 1 cut(s) | 822 |
| BstBAI | YACGTR | 1 cut(s) | 305 |
| BstC8I | GCNNGC | 7 cut(s) | 200, 1239, 1334, 1341, 1443, 2028, 2127 |
| BstDEI | CTNAG | 8 cut(s) | 942, 1122, 1743, 1791, 1965, 2054, 2145, 2367 |
| BstDSI | CCRYGG | 1 cut(s) | 85 |
| BstENI | CCTNNNNNAGG | 2 cut(s) | 320, 941 |
| BstF5I | GGATG | 3 cut(s) | 496, 775, 2068 |
| BstFNI | CGCG | 1 cut(s) | 906 |
| BstH2I | RGCGCY | 1 cut(s) | 2182 |
| BstHHI | GCGC | 2 cut(s) | 1332, 2181 |
| BstMAI | GTCTC | 4 cut(s) | 350, 424, 1970, 2129 |
| BstNI | CCWGG | 3 cut(s) | 590, 993, 1065 |
| BstNSI | RCATGY | 5 cut(s) | 206, 1241, 1336, 1432, 1631 |
| BstSCI | CCNGG | 3 cut(s) | 588, 991, 1063 |
| BstSFI | CTRYAG | 4 cut(s) | 259, 1337, 1869, 2271 |
| BstUI | CGCG | 1 cut(s) | 906 |
| BstV2I | GAAGAC | 2 cut(s) | 846, 1542 |
| BstX2I | RGATCY | 5 cut(s) | 280, 870, 1291, 1873, 1879 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 2353 |
| BstYI | RGATCY | 5 cut(s) | 280, 870, 1291, 1873, 1879 |
| Bsu15I | ATCGAT | 1 cut(s) | 223 |
| BsuRI | GGCC | 4 cut(s) | 931, 1106, 1143, 1178 |
| BsuTUI | ATCGAT | 1 cut(s) | 223 |
| BtgI | CCRYGG | 1 cut(s) | 85 |
| BtgZI | GCGATG | 2 cut(s) | 377, 2069 |
| BtrI | CACGTC | 1 cut(s) | 1153 |
| BtsCI | GGATG | 3 cut(s) | 496, 775, 2068 |
| BtsI | GCAGTG | 1 cut(s) | 1430 |
| BtsIMutI | CAGTG | 2 cut(s) | 1321, 1430 |
| BveI | ACCTGC | 1 cut(s) | 1894 |
| Cac8I | GCNNGC | 7 cut(s) | 200, 1239, 1334, 1341, 1443, 2028, 2127 |
| CaiI | CAGNNNCTG | 3 cut(s) | 1652, 2041, 2053 |
| CciI | TCATGA | 1 cut(s) | 1414 |
| CfoI | GCGC | 2 cut(s) | 1332, 2181 |
| Cfr13I | GGNCC | 2 cut(s) | 130, 1104 |
| ClaI | ATCGAT | 1 cut(s) | 223 |
| CseI | GACGC | 1 cut(s) | 68 |
| Csp6I | GTAC | 4 cut(s) | 238, 823, 1936, 2473 |
| CviQI | GTAC | 4 cut(s) | 238, 823, 1936, 2473 |
| DdeI | CTNAG | 8 cut(s) | 942, 1122, 1743, 1791, 1965, 2054, 2145, 2367 |
| DraI | TTTAAA | 1 cut(s) | 432 |
| EciI | GGCGGA | 1 cut(s) | 1204 |
| Ecl136II | GAGCTC | 2 cut(s) | 584, 1487 |
| Eco130I | CCWWGG | 3 cut(s) | 85, 1971, 2377 |
| Eco147I | AGGCCT | 1 cut(s) | 931 |
| Eco24I | GRGCYC | 4 cut(s) | 586, 1086, 1489, 2377 |
| Eco47I | GGWCC | 1 cut(s) | 130 |
| Eco53kI | GAGCTC | 2 cut(s) | 584, 1487 |
| Eco57I | CTGAAG | 6 cut(s) | 68, 162, 840, 1728, 1934, 2063 |
| Eco88I | CYCGRG | 1 cut(s) | 761 |
| EcoICRI | GAGCTC | 2 cut(s) | 584, 1487 |
| EcoNI | CCTNNNNNAGG | 2 cut(s) | 320, 941 |
| EcoRI | GAATTC | 1 cut(s) | 1957 |
| EcoRII | CCWGG | 3 cut(s) | 588, 991, 1063 |
| EcoT14I | CCWWGG | 3 cut(s) | 85, 1971, 2377 |
| EcoT22I | ATGCAT | 2 cut(s) | 1633, 2265 |
| EcoT38I | GRGCYC | 4 cut(s) | 586, 1086, 1489, 2377 |
| ErhI | CCWWGG | 3 cut(s) | 85, 1971, 2377 |
| FaqI | GGGAC | 1 cut(s) | 298 |
| FauI | CCCGC | 1 cut(s) | 327 |
| FauNDI | CATATG | 3 cut(s) | 19, 148, 472 |
| FbaI | TGATCA | 4 cut(s) | 493, 985, 1345, 1396 |
| FblI | GTMKAC | 1 cut(s) | 2115 |
| FokI | GGATG | 3 cut(s) | 483, 782, 2075 |
| FriOI | GRGCYC | 4 cut(s) | 586, 1086, 1489, 2377 |
| FspBI | CTAG | 6 cut(s) | 485, 557, 677, 1281, 2027, 2482 |
| GlaI | GCGC | 2 cut(s) | 1331, 2180 |
| GsuI | CTGGAG | 1 cut(s) | 572 |
| HaeII | RGCGCY | 1 cut(s) | 2182 |
| HaeIII | GGCC | 4 cut(s) | 931, 1106, 1143, 1178 |
| HapII | CCGG | 4 cut(s) | 160, 503, 1465, 2132 |
| HgaI | GACGC | 1 cut(s) | 68 |
| HhaI | GCGC | 2 cut(s) | 1332, 2181 |
| Hin1I | GRCGYC | 1 cut(s) | 60 |
| Hin6I | GCGC | 2 cut(s) | 1330, 2179 |
| HinP1I | GCGC | 2 cut(s) | 1330, 2179 |
| HincII | GTYRAC | 4 cut(s) | 114, 1909, 2116, 2422 |
| HindII | GTYRAC | 4 cut(s) | 114, 1909, 2116, 2422 |
| HindIII | AAGCTT | 1 cut(s) | 665 |
| HinfI | GANTC | 9 cut(s) | 718, 1222, 1576, 1685, 1820, 1967, 2078, 2252, 2339 |
| HpaI | GTTAAC | 1 cut(s) | 114 |
| HpaII | CCGG | 4 cut(s) | 160, 503, 1465, 2132 |
| HphI | GGTGA | 9 cut(s) | 673, 783, 905, 980, 1060, 1256, 1406, 1463, 1484 |
| Hpy166II | GTNNAC | 5 cut(s) | 114, 1383, 1909, 2116, 2422 |
| Hpy8I | GTNNAC | 5 cut(s) | 114, 1383, 1909, 2116, 2422 |
| HpyCH4III | ACNGT | 5 cut(s) | 134, 696, 1198, 1316, 2419 |
| HpyCH4IV | ACGT | 3 cut(s) | 304, 514, 1152 |
| HpyF3I | CTNAG | 8 cut(s) | 942, 1122, 1743, 1791, 1965, 2054, 2145, 2367 |
| HpySE526I | ACGT | 3 cut(s) | 304, 514, 1152 |
| Hsp92I | GRCGYC | 1 cut(s) | 60 |
| HspAI | GCGC | 2 cut(s) | 1330, 2179 |
| Kpn2I | TCCGGA | 3 cut(s) | 159, 502, 2131 |
| Ksp22I | TGATCA | 4 cut(s) | 493, 985, 1345, 1396 |
| KspAI | GTTAAC | 1 cut(s) | 114 |
| LmnI | GCTCC | 6 cut(s) | 1033, 1081, 2134, 2160, 2171, 2372 |
| LweI | GCATC | 8 cut(s) | 760, 1454, 1655, 2053, 2092, 2112, 2250, 2440 |
| MaeI | CTAG | 6 cut(s) | 485, 557, 677, 1281, 2027, 2482 |
| MaeII | ACGT | 3 cut(s) | 304, 514, 1152 |
| MaeIII | GTNAC | 3 cut(s) | 3, 305, 1048 |
| MflI | RGATCY | 5 cut(s) | 280, 870, 1291, 1873, 1879 |
| MhlI | GDGCHC | 5 cut(s) | 586, 1086, 1188, 1489, 2377 |
| MlyI | GAGTC | 3 cut(s) | 1231, 1570, 1976 |
| MmeI | TCCRAC | 2 cut(s) | 1011, 1217 |
| Mph1103I | ATGCAT | 2 cut(s) | 1633, 2265 |
| MroI | TCCGGA | 3 cut(s) | 159, 502, 2131 |
| MroXI | GAANNNNTTC | 1 cut(s) | 74 |
| MslI | CAYNNNNRTG | 4 cut(s) | 207, 1099, 1242, 1626 |
| MspA1I | CMGCKG | 5 cut(s) | 849, 860, 914, 1259, 1652 |
| MspCI | CTTAAG | 2 cut(s) | 1564, 2432 |
| MspI | CCGG | 4 cut(s) | 160, 503, 1465, 2132 |
| MspR9I | CCNGG | 3 cut(s) | 590, 993, 1065 |
| Mva1269I | GAATGC | 2 cut(s) | 1036, 1621 |
| MvaI | CCWGG | 3 cut(s) | 590, 993, 1065 |
| MvnI | CGCG | 1 cut(s) | 906 |
| NcoI | CCATGG | 1 cut(s) | 85 |
| NdeI | CATATG | 3 cut(s) | 19, 148, 472 |
| NheI | GCTAGC | 1 cut(s) | 2026 |
| NlaIV | GGNNCC | 6 cut(s) | 872, 1083, 1353, 2301, 2358, 2374 |
| NmuCI | GTSAC | 3 cut(s) | 3, 305, 1048 |
| NsiI | ATGCAT | 2 cut(s) | 1633, 2265 |
| NspI | RCATGY | 5 cut(s) | 206, 1241, 1336, 1432, 1631 |
| OliI | CACNNNNGTG | 1 cut(s) | 1099 |
| PaeI | GCATGC | 2 cut(s) | 1241, 1336 |
| PagI | TCATGA | 1 cut(s) | 1414 |
| PasI | CCCWGGG | 1 cut(s) | 1064 |
| PceI | AGGCCT | 1 cut(s) | 931 |
| PctI | GAATGC | 2 cut(s) | 1036, 1621 |
| PdmI | GAANNNNTTC | 1 cut(s) | 74 |
| PfeI | GAWTC | 6 cut(s) | 718, 1685, 1820, 2078, 2252, 2339 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 86 |
| PfoI | TCCNGGA | 1 cut(s) | 588 |
| PleI | GAGTC | 3 cut(s) | 1230, 1570, 1975 |
| PpsI | GAGTC | 3 cut(s) | 1230, 1570, 1975 |
| Ppu21I | YACGTR | 1 cut(s) | 305 |
| PshBI | ATTAAT | 1 cut(s) | 2330 |
| Psp124BI | GAGCTC | 2 cut(s) | 586, 1489 |
| Psp1406I | AACGTT | 1 cut(s) | 514 |
| Psp6I | CCWGG | 3 cut(s) | 588, 991, 1063 |
| PspGI | CCWGG | 3 cut(s) | 588, 991, 1063 |
| PspN4I | GGNNCC | 6 cut(s) | 872, 1083, 1353, 2301, 2358, 2374 |
| PspPI | GGNCC | 2 cut(s) | 130, 1104 |
| PstI | CTGCAG | 2 cut(s) | 1341, 2275 |
| PstNI | CAGNNNCTG | 3 cut(s) | 1652, 2041, 2053 |
| PsuI | RGATCY | 5 cut(s) | 280, 870, 1291, 1873, 1879 |
| PvuII | CAGCTG | 3 cut(s) | 849, 860, 1652 |
| RsaI | GTAC | 4 cut(s) | 239, 824, 1937, 2474 |
| RsaNI | GTAC | 4 cut(s) | 238, 823, 1936, 2473 |
| RseI | CAYNNNNRTG | 4 cut(s) | 207, 1099, 1242, 1626 |
| SacI | GAGCTC | 2 cut(s) | 586, 1489 |
| SalI | GTCGAC | 1 cut(s) | 2114 |
| Sau96I | GGNCC | 2 cut(s) | 130, 1104 |
| ScaI | AGTACT | 1 cut(s) | 1937 |
| SchI | GAGTC | 3 cut(s) | 1231, 1570, 1976 |
| ScrFI | CCNGG | 3 cut(s) | 590, 993, 1065 |
| SduI | GDGCHC | 5 cut(s) | 586, 1086, 1188, 1489, 2377 |
| SfaNI | GCATC | 8 cut(s) | 760, 1454, 1655, 2053, 2092, 2112, 2250, 2440 |
| SfcI | CTRYAG | 4 cut(s) | 259, 1337, 1869, 2271 |
| SinI | GGWCC | 1 cut(s) | 130 |
| SmiMI | CAYNNNNRTG | 4 cut(s) | 207, 1099, 1242, 1626 |
| SmlI | CTYRAG | 4 cut(s) | 1025, 1564, 2402, 2432 |
| SmoI | CTYRAG | 4 cut(s) | 1025, 1564, 2402, 2432 |
| SphI | GCATGC | 2 cut(s) | 1241, 1336 |
| SseBI | AGGCCT | 1 cut(s) | 931 |
| SsiI | CCGC | 5 cut(s) | 334, 904, 914, 1215, 1257 |
| SspI | AATATT | 1 cut(s) | 292 |
| SspMI | CTAG | 6 cut(s) | 485, 557, 677, 1281, 2027, 2482 |
| SstI | GAGCTC | 2 cut(s) | 586, 1489 |
| StuI | AGGCCT | 1 cut(s) | 931 |
| StyD4I | CCNGG | 3 cut(s) | 588, 991, 1063 |
| StyI | CCWWGG | 3 cut(s) | 85, 1971, 2377 |
| TaaI | ACNGT | 5 cut(s) | 134, 696, 1198, 1316, 2419 |
| TaiI | ACGT | 3 cut(s) | 307, 517, 1155 |
| TaqI | TCGA | 5 cut(s) | 223, 621, 2115, 2194, 2342 |
| TatI | WGTACW | 3 cut(s) | 237, 822, 1935 |
| TauI | GCSGC | 1 cut(s) | 1259 |
| TfiI | GAWTC | 6 cut(s) | 718, 1685, 1820, 2078, 2252, 2339 |
| TscAI | CASTG | 2 cut(s) | 1321, 1430 |
| TseFI | GTSAC | 3 cut(s) | 3, 305, 1048 |
| Tsp45I | GTSAC | 3 cut(s) | 3, 305, 1048 |
| TspRI | CASTG | 2 cut(s) | 1321, 1430 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 86 |
| Vha464I | CTTAAG | 2 cut(s) | 1564, 2432 |
| VpaK11BI | GGWCC | 1 cut(s) | 130 |
| VspI | ATTAAT | 1 cut(s) | 2330 |
| XagI | CCTNNNNNAGG | 2 cut(s) | 320, 941 |
| XapI | RAATTY | 7 cut(s) | 459, 778, 1496, 1604, 1957, 2099, 2230 |
| XceI | RCATGY | 5 cut(s) | 206, 1241, 1336, 1432, 1631 |
| XmiI | GTMKAC | 1 cut(s) | 2115 |
| XmnI | GAANNNNTTC | 1 cut(s) | 74 |
| XspI | CTAG | 6 cut(s) | 485, 557, 677, 1281, 2027, 2482 |
| ZrmI | AGTACT | 1 cut(s) | 1937 |
| Zsp2I | ATGCAT | 2 cut(s) | 1633, 2265 |