MD17G1197900.v1.1

NatA auxiliary

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr17
OG0012120
Physical Location & Seq
Forward (+)
23714688 .. 23735485
20798 bp
Loading structure...
UTR
Exon/CDS
Intron
MD17G1197900.v1.1.491

Sequence Viewer

Length: 2694 bp
ATGGGTGCCTCACTCCCCCCCAAAGAGGCCAACCTCTTCAAGCTCATAGTCAAATCATATGAAACTAAACAATATAAGAAGGGACTGAAGGCAGCAGACGCCATATTGAAAAAGTTTCCAGACCATGGAGAAACATTATCAATGAAGGGGCTAACATTAAATTGCATGGACCGCAAATCTGAAGCATATGAACTTGTCCGGATAGGACTGAAGAATGACCTGAAAAGTCATGTTTGCTGGCATGTTTATGGTCTTCTTTATCGGTCAGACAGAGAATACAGGGAGGCAATAAAATGCTACAGAAATGCTCTGAGGATAGATCCAGACAATATTGAAATACTCCGTGATCTGTCACTCCTACAGGCTCAAATGCGGGATTTGAGCGGTTTTGTTGAGACAAGGCAGCAACTTCTGACTTTGAAACCAAATCATCGCATGAATTGGATTGGCTTTGCTGTTTCCCATCATTTAAATTCAAATGCTTTAAAAGCTGTTGAAATTCTGGAAGCATATGAAGGGACTCTAGAAGATGATTATCCTCCAGATAATGAGCGTTGTGAGCATGGGGAGATGCTTTTATATAAGATTTCGTTGTTAGAGGAATGTAGCTTAATTGAGAGAGCTCTTGAGGAATTGCACAAGAAAGAGTCAAGAATTGTTGATAGGTTGGATTATAAAGAACAAGAGGTTTCTCTTTTGGTGAAGCTTGGTTACCTAGAAGAAGGTGCTGAATTGTATAGGGTGTTGCTTAAAATGAATCCTGACAACTATCGATATTATCAAGGCCTGCAAAAATGTCTTGGGCTGTATGCAGAGAATGCCCAGTATTCACTTGATGAAATTGAACACTTGGATGCCTTGTACAAATCCCTTGCACAGAAATACAGTTGGTCGTCGGCTGTTAAGAGAATACCACTTGATTTCTTACAAGGTGACAAGTTTCGAGAAGCTGCAGATAATTATATCAGGCCTCTCCTTACTAAGGGAGTTCCTTCATTATTCTCTGATCTTTCTCCTCTGTATGATCACCCTGGAAAGGCAGACATTCTGGAACAACTTATTCTTGAGTTGGAACAGTCAGTTAGGATGACTGGTCGATACCCTGGGAGGGTAGAGAAGGAGCCCCCATCGACCCTTTTGTGGGCCTTGTTTTTATTGGCTCAGCATTATGATAGACGAGGTCAATATGACATGGCTCTATCGAAAATTGATGAGGCCATAGAGCACACTCCAACTGTGATTGATTTATATTCTGCAAAGAGTCGGGTTTTGAAGCATGCTGGTGATTTGCCTGCTGCTGCTGCATTAGCAGATGAAGCTAGATGTATGGATCTTGCGGATCGCTATATAAATAGTGACTGTGTTAAGCGTATGCTGCAGGCTGATCAGGTTCCTTTGGCAGACAAAACTGCTGTACTGTTCACAAAAGATGGTGATCAGCACAACAACCTTCATGATATGCAGTGCATGTGGTATGAACTTGCTTCCGGTGAGAGTTATTTCCGCCAAGGTGATCTTGGACGAGCCTTAAAAAAATTTTTAGGTGTGGAGAAGCATTATGCTGATATTACAGAAGATCAGTTTGACTTCCATTCTTATTGCTTAAGGAAAATGACGCTGCGTGCCTATGTTGAAATGCTTAAATTTCAAGATCGGTTGCATTCACATGCTTATTTTCACAAAGCAGCAGTTGGTGCAATCAGATGCTATTTGAAGTTGTATGATTCGCCTTTGAAATCTACATCCGAAGAAGATGATGAGATGTCTAAGTTGCCCGCTTCTCAAAAAAAGAAGCTGAGGCAAAAACAGAGAAAGGCAGAAGCACGAGCTAAGAAGGAGGCAGAGGGAAAAAATGAAGAATCCAGTGCAGGTGGTGTTTCTAAGTCTGGGAAACGAAATGTAAAGCCTGTTGATCCTGATCCGCATGGGGAGAAGTTGTTGCAGGTTGAGGATCCGATGTTAGAAGCTACGAAGTACTTGAAGCTGCTTCAGAAGAACTCGCCTGAGTCCTTGGAGACGCACTTGCTTTCTTTTGAAGTAAATATGAGGAAGCAGAAGATTTTGCTTGCCTTTCAGGCTTTGAAGCAGCTTCTGAGGTTAAATGCTGAACACCCAGACTCGCATCGGTCCTTGATTAAATTCTTCCATAAAGTGGGTTCAATGCCTGCTCCTGTGACGGATGGTGAGAAACTCATTTGGAGTGTCTTGGAAGCTGAGCGCCCAATGATCAGTCAATTGCAAAATAAGTCTTTGGTGGAGGCAAACAAGAATTTCTTGGAGAAACATCAAGATTCTTTAATGCATAGAGCTGCAGTTGCAGAAATGCTATATGCTCTGGAATCTGACAAGAAATCTGAGGCTATTAAATTAATAGAAGAGTCAACCAACAATATGGTGCCCAAAAATGGAGCGCTTGGACCTGTCAGAGAGTGGACACTCAAAGATTGTATTACAGTCAACAAACTCCTTGAAACTATTCTTGGTGACCCTGCTGCTGCTTTGAGATGGAAAAAACGGTGTGCTGAGTACTTCCCTTACTCAACATACTTTGAAGGTAAATGCAGCTCTGCCGTACCCAACTCACCATACAACCAAAATGGAATAGCGAACCATACGGAAGGGGAGCAAAGTGCAGATTCCATTGCAGTAAATGGAAATTTAGAGGCATTCAAAGGCCTTACTGTCCAATCATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
NARP1 TPR_11 TPR_2

Protein Analysis

898

Amino Acids

102.44

Weight (kDa)

6.66

Isoelectric Point (pI)

39.49

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
TPR_2 PF07719 79 - 110 8.4e-06 Tetratricopeptide repeat
TPR_11 PF13414 84 - 123 6.6e-07 TPR repeat
TPR_1 PF00515 84 - 110 9.6e-06 Tetratricopeptide repeat
NatA_aux_su PF12569 187 - 696 3.9e-201 N-terminal acetyltransferase A, auxiliary subunit
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0012120)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G80410 AT1G80410
fragaria_vesca FvH4_6g30900 FvH4_6g30900
malus_domestica MD09G1215200.v1.1 MD17G1197900.v1.1
prunus_persica Prupe.3G074300_v2.0.a1
pyrus_communis pycom09g13200 pycom17g20280
rosa_chinensis RchiOBHm_Chr2g0137391
rosa_laevigata RLG00000019656
rosa_multiflora Rmu_ssc0000312.1_g000014
rosa_roxburghii Rroxscaffold_2G00107080
rosa_rugosa Rorug02G0342200
rosa_samantha Rh2AG390300 Rh2BG397700 Rh2CG377600 Rh2DG413000
rosa_wichuraiana Rw2G031980

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 675
AarI CACCTGC 1 cut(s) 1859
Acc36I ACCTGC 2 cut(s) 1859, 1933
AccB1I GGYRCC 2 cut(s) 5, 2395
AccB7I CCANNNNNTGG 2 cut(s) 125, 2152
AccBSI CCGCTC 1 cut(s) 384
AccIII TCCGGA 1 cut(s) 198
AciI CCGC 7 cut(s) 172, 373, 384, 1337, 1504, 1776, 1922
AclWI GGATC 7 cut(s) 314, 1338, 1347, 1907, 1913, 1946, 1959
AcsI RAATTY 7 cut(s) 472, 498, 1535, 1643, 2138, 2269, 2656
AcuI CTGAAG 4 cut(s) 107, 201, 230, 1973
AcyI GRCGYC 1 cut(s) 99
AfaI GTAC 5 cut(s) 863, 1416, 1976, 2528, 2574
AfeI AGCGCT 1 cut(s) 2412
AfiI CCNNNNNNNGG 9 cut(s) 25, 125, 982, 1036, 1108, 1140, 1141, 2152, 2405
AflII CTTAAG 1 cut(s) 1603
AjnI CCWGG 2 cut(s) 1030, 1102
AjuI GAANNNNNNNTTGG 2 cut(s) 2463, 2495
Alw21I GWGCWC 2 cut(s) 625, 1227
Alw26I GTCTC 2 cut(s) 389, 2009
AlwI GGATC 7 cut(s) 314, 1338, 1347, 1907, 1913, 1946, 1959
AlwNI CAGNNNCTG 1 cut(s) 2092
Aor13HI TCCGGA 1 cut(s) 198
Aor51HI AGCGCT 1 cut(s) 2412
AoxI GGCC 6 cut(s) 27, 784, 968, 1143, 1215, 2674
ApoI RAATTY 7 cut(s) 472, 498, 1535, 1643, 2138, 2269, 2656
AseI ATTAAT 1 cut(s) 2369
Asp700I GAANNNNTTC 1 cut(s) 2475
AspLEI GCGC 2 cut(s) 2220, 2413
AspS9I GGNCC 4 cut(s) 169, 1143, 2127, 2417
AvaII GGWCC 3 cut(s) 169, 2127, 2417
BaeGI GKGCMC 1 cut(s) 2400
BamHI GGATCC 1 cut(s) 1951
BanI GGYRCC 2 cut(s) 5, 2395
BanII GRGCYC 2 cut(s) 625, 1125
BarI GAAGNNNNNNTAC 2 cut(s) 695, 727
BauI CACGAG 1 cut(s) 1824
BbsI GAAGAC 1 cut(s) 245
Bbv12I GWGCWC 2 cut(s) 625, 1227
BbvCI CCTCAGC 1 cut(s) 1796
BccI CCATC 5 cut(s) 471, 1135, 1424, 2174, 2499
BceAI ACGGC 1 cut(s) 2555
BciT130I CCWGG 2 cut(s) 1032, 1104
BclI TGATCA 4 cut(s) 1024, 1384, 1435, 2226
BcoDI GTCTC 2 cut(s) 389, 2009
BfaI CTAG 3 cut(s) 524, 716, 1320
BfmI CTRYAG 5 cut(s) 298, 359, 951, 1376, 2310
BfoI RGCGCY 2 cut(s) 2221, 2414
BfrI CTTAAG 1 cut(s) 1603
BfuAI ACCTGC 2 cut(s) 1859, 1933
BglI GCCNNNNNGGC 1 cut(s) 2075
BlpI GCTNAGC 2 cut(s) 1161, 2214
BmcAI AGTACT 2 cut(s) 1976, 2528
Bme1390I CCNGG 2 cut(s) 1032, 1104
Bme18I GGWCC 3 cut(s) 169, 2127, 2417
BmgT120I GGNCC 4 cut(s) 169, 1143, 2127, 2417
BmiI GGNNCC 5 cut(s) 7, 1122, 1392, 1953, 2397
BmrFI CCNGG 2 cut(s) 1032, 1104
BmrI ACTGGG 1 cut(s) 817
BmsI GCATC 4 cut(s) 561, 844, 1694, 2131
BmuI ACTGGG 1 cut(s) 817
BpiI GAAGAC 1 cut(s) 245
BpmI CTGGAG 1 cut(s) 525
Bpu10I CCTNAGC 1 cut(s) 1796
Bpu1102I GCTNAGC 2 cut(s) 1161, 2214
BpuEI CTTGAG 2 cut(s) 647, 1085
Bsa29I ATCGAT 1 cut(s) 772
BsaBI GATNNNNATC 3 cut(s) 534, 1434, 1917
BsaHI GRCGYC 1 cut(s) 99
BsaJI CCNNGG 6 cut(s) 124, 1030, 1102, 1103, 1507, 2010
BsaWI WCCGGW 2 cut(s) 198, 1487
BsaXI ACNNNNNCTCC 2 cut(s) 1922, 1952
Bsc4I CCNNNNNNNGG 9 cut(s) 25, 125, 982, 1036, 1108, 1140, 1141, 2152, 2405
Bse1I ACTGG 3 cut(s) 823, 1096, 1863
Bse3DI GCAATG 1 cut(s) 2640
Bse8I GATNNNNATC 3 cut(s) 534, 1434, 1917
BseAI TCCGGA 1 cut(s) 198
BseBI CCWGG 2 cut(s) 1032, 1104
BseCI ATCGAT 1 cut(s) 772
BseDI CCNNGG 6 cut(s) 124, 1030, 1102, 1103, 1507, 2010
BseGI GGATG 4 cut(s) 859, 1092, 1742, 2185
BseJI GATNNNNATC 3 cut(s) 534, 1434, 1917
BseLI CCNNNNNNNGG 9 cut(s) 25, 125, 982, 1036, 1108, 1140, 1141, 2152, 2405
BseMI GCAATG 1 cut(s) 2640
BseMII CTCAG 8 cut(s) 302, 1175, 1787, 1995, 2084, 2205, 2346, 2514
BseNI ACTGG 3 cut(s) 823, 1096, 1863
BseRI GAGGAG 1 cut(s) 1005
BseSI GKGCMC 1 cut(s) 2400
BsgI GTGCAG 2 cut(s) 1887, 2652
BshFI GGCC 6 cut(s) 29, 786, 970, 1145, 1217, 2676
BshNI GGYRCC 2 cut(s) 5, 2395
BshVI ATCGAT 1 cut(s) 772
BsiHKAI GWGCWC 2 cut(s) 625, 1227
BsiSI CCGG 2 cut(s) 199, 1488
BslFI GGGAC 2 cut(s) 96, 532
BslI CCNNNNNNNGG 9 cut(s) 25, 125, 982, 1036, 1108, 1140, 1141, 2152, 2405
BsmAI GTCTC 2 cut(s) 389, 2009
BsmBI CGTCTC 1 cut(s) 2009
BsmFI GGGAC 2 cut(s) 96, 532
BsmI GAATGC 3 cut(s) 823, 1660, 2666
BsnI GGCC 6 cut(s) 29, 786, 970, 1145, 1217, 2676
Bsp1286I GDGCHC 4 cut(s) 625, 1125, 1227, 2400
Bsp13I TCCGGA 1 cut(s) 198
Bsp1407I TGTACA 1 cut(s) 861
Bsp1720I GCTNAGC 2 cut(s) 1161, 2214
Bsp19I CCATGG 1 cut(s) 124
BspACI CCGC 7 cut(s) 172, 373, 384, 1337, 1504, 1776, 1922
BspANI GGCC 6 cut(s) 29, 786, 970, 1145, 1217, 2676
BspCNI CTCAG 8 cut(s) 303, 1174, 1788, 1996, 2085, 2206, 2347, 2515
BspDI ATCGAT 1 cut(s) 772
BspEI TCCGGA 1 cut(s) 198
BspHI TCATGA 2 cut(s) 1453, 2690
BspLI GGNNCC 5 cut(s) 7, 1122, 1392, 1953, 2397
BspMAI CTGCAG 3 cut(s) 955, 1380, 2314
BspMI ACCTGC 2 cut(s) 1859, 1933
BspPI GGATC 7 cut(s) 314, 1338, 1347, 1907, 1913, 1946, 1959
BspT107I GGYRCC 2 cut(s) 5, 2395
BspTI CTTAAG 1 cut(s) 1603
BsrBI CCGCTC 1 cut(s) 384
BsrDI GCAATG 1 cut(s) 2640
BsrGI TGTACA 1 cut(s) 861
BsrI ACTGG 3 cut(s) 823, 1096, 1863
BssECI CCNNGG 6 cut(s) 124, 1030, 1102, 1103, 1507, 2010
BssNI GRCGYC 1 cut(s) 99
BssSI CACGAG 1 cut(s) 1824
BssT1I CCWWGG 3 cut(s) 124, 1507, 2010
Bst2BI CACGAG 1 cut(s) 1824
Bst2UI CCWGG 2 cut(s) 1032, 1104
Bst4CI ACNGT 8 cut(s) 887, 1077, 1237, 1361, 1419, 2455, 2517, 2683
Bst6I CTCTTC 2 cut(s) 41, 2370
BstACI GRCGYC 1 cut(s) 99
BstAFI CTTAAG 1 cut(s) 1603
BstAPI GCANNNNNTGC 2 cut(s) 818, 1694
BstAUI TGTACA 1 cut(s) 861
BstC8I GCNNGC 9 cut(s) 239, 788, 1278, 1293, 1380, 1623, 1776, 2067, 2166
BstDSI CCRYGG 1 cut(s) 124
BstEII GGTNACC 2 cut(s) 710, 2483
BstENI CCTNNNNNAGG 1 cut(s) 980
BstF5I GGATG 4 cut(s) 859, 1092, 1742, 2185
BstH2I RGCGCY 2 cut(s) 2221, 2414
BstHHI GCGC 2 cut(s) 2220, 2413
BstMAI GTCTC 2 cut(s) 389, 2009
BstNI CCWGG 2 cut(s) 1032, 1104
BstNSI RCATGY 4 cut(s) 245, 1280, 1471, 1670
BstPI GGTNACC 2 cut(s) 710, 2483
BstSCI CCNGG 2 cut(s) 1030, 1102
BstSFI CTRYAG 5 cut(s) 298, 359, 951, 1376, 2310
BstSLI GKGCMC 1 cut(s) 2400
BstV2I GAAGAC 1 cut(s) 245
BstX2I RGATCY 3 cut(s) 319, 1330, 1951
BstXI CCANNNNNNTGG 1 cut(s) 2392
BstYI RGATCY 3 cut(s) 319, 1330, 1951
Bsu15I ATCGAT 1 cut(s) 772
BsuRI GGCC 6 cut(s) 29, 786, 970, 1145, 1217, 2676
BsuTUI ATCGAT 1 cut(s) 772
BtgI CCRYGG 1 cut(s) 124
BtgZI GCGATG 1 cut(s) 416
BtsCI GGATG 4 cut(s) 859, 1092, 1742, 2185
BtsI GCAGTG 1 cut(s) 1469
BtsIMutI CAGTG 2 cut(s) 1469, 1870
BveI ACCTGC 2 cut(s) 1859, 1933
Cac8I GCNNGC 9 cut(s) 239, 788, 1278, 1293, 1380, 1623, 1776, 2067, 2166
CaiI CAGNNNCTG 1 cut(s) 2092
CciI TCATGA 2 cut(s) 1453, 2690
CfoI GCGC 2 cut(s) 2220, 2413
Cfr13I GGNCC 4 cut(s) 169, 1143, 2127, 2417
ClaI ATCGAT 1 cut(s) 772
CseI GACGC 3 cut(s) 107, 1624, 2026
Csp6I GTAC 5 cut(s) 862, 1415, 1975, 2527, 2573
CviQI GTAC 5 cut(s) 862, 1415, 1975, 2527, 2573
DraI TTTAAA 2 cut(s) 471, 486
Eam1104I CTCTTC 2 cut(s) 41, 2370
EarI CTCTTC 2 cut(s) 41, 2370
EciI GGCGGA 1 cut(s) 1493
Ecl136II GAGCTC 1 cut(s) 623
Eco130I CCWWGG 3 cut(s) 124, 1507, 2010
Eco147I AGGCCT 3 cut(s) 786, 970, 2676
Eco24I GRGCYC 2 cut(s) 625, 1125
Eco47I GGWCC 3 cut(s) 169, 2127, 2417
Eco47III AGCGCT 1 cut(s) 2412
Eco53kI GAGCTC 1 cut(s) 623
Eco57I CTGAAG 4 cut(s) 107, 201, 230, 1973
Eco91I GGTNACC 2 cut(s) 710, 2483
EcoICRI GAGCTC 1 cut(s) 623
EcoNI CCTNNNNNAGG 1 cut(s) 980
EcoO65I GGTNACC 2 cut(s) 710, 2483
EcoRII CCWGG 2 cut(s) 1030, 1102
EcoT14I CCWWGG 3 cut(s) 124, 1507, 2010
EcoT22I ATGCAT 1 cut(s) 2304
EcoT38I GRGCYC 2 cut(s) 625, 1125
ErhI CCWWGG 3 cut(s) 124, 1507, 2010
Esp3I CGTCTC 1 cut(s) 2009
FalI AAGNNNNNCTT 4 cut(s) 1500, 1532, 2258, 2290
FaqI GGGAC 2 cut(s) 96, 532
FauI CCCGC 2 cut(s) 366, 1783
FauNDI CATATG 3 cut(s) 58, 187, 511
FbaI TGATCA 4 cut(s) 1024, 1384, 1435, 2226
FokI GGATG 4 cut(s) 866, 1099, 1729, 2192
FriOI GRGCYC 2 cut(s) 625, 1125
FspBI CTAG 3 cut(s) 524, 716, 1320
GlaI GCGC 2 cut(s) 2219, 2412
GsuI CTGGAG 1 cut(s) 525
HaeII RGCGCY 2 cut(s) 2221, 2414
HaeIII GGCC 6 cut(s) 29, 786, 970, 1145, 1217, 2676
HapII CCGG 2 cut(s) 199, 1488
HgaI GACGC 3 cut(s) 107, 1624, 2026
HhaI GCGC 2 cut(s) 2220, 2413
Hin1I GRCGYC 1 cut(s) 99
Hin6I GCGC 2 cut(s) 2218, 2411
HinP1I GCGC 2 cut(s) 2218, 2411
HincII GTYRAC 2 cut(s) 2382, 2458
HindII GTYRAC 2 cut(s) 2382, 2458
HindIII AAGCTT 1 cut(s) 704
HpaII CCGG 2 cut(s) 199, 1488
Hpy166II GTNNAC 4 cut(s) 1422, 2382, 2433, 2458
Hpy8I GTNNAC 4 cut(s) 1422, 2382, 2433, 2458
Hpy99I CGWCG 1 cut(s) 898
HpyCH4III ACNGT 8 cut(s) 887, 1077, 1237, 1361, 1419, 2455, 2517, 2683
Hsp92I GRCGYC 1 cut(s) 99
HspAI GCGC 2 cut(s) 2218, 2411
Kpn2I TCCGGA 1 cut(s) 198
Ksp22I TGATCA 4 cut(s) 1024, 1384, 1435, 2226
LmnI GCTCC 4 cut(s) 1120, 2173, 2408, 2623
LweI GCATC 4 cut(s) 561, 844, 1694, 2131
MaeI CTAG 3 cut(s) 524, 716, 1320
MaeIII GTNAC 6 cut(s) 351, 710, 932, 1355, 2173, 2483
MbiI CCGCTC 1 cut(s) 384
MfeI CAATTG 1 cut(s) 2234
MflI RGATCY 3 cut(s) 319, 1330, 1951
MhlI GDGCHC 4 cut(s) 625, 1125, 1227, 2400
MlyI GAGTC 6 cut(s) 514, 656, 1270, 2015, 2111, 2387
MmeI TCCRAC 3 cut(s) 648, 1050, 1256
Mph1103I ATGCAT 1 cut(s) 2304
MroI TCCGGA 1 cut(s) 198
MroXI GAANNNNTTC 1 cut(s) 2475
MslI CAYNNNNRTG 4 cut(s) 246, 852, 1281, 1665
MspCI CTTAAG 1 cut(s) 1603
MspI CCGG 2 cut(s) 199, 1488
MspR9I CCNGG 2 cut(s) 1032, 1104
MunI CAATTG 1 cut(s) 2234
Mva1269I GAATGC 3 cut(s) 823, 1660, 2666
MvaI CCWGG 2 cut(s) 1032, 1104
NcoI CCATGG 1 cut(s) 124
NdeI CATATG 3 cut(s) 58, 187, 511
NlaIV GGNNCC 5 cut(s) 7, 1122, 1392, 1953, 2397
NmuCI GTSAC 5 cut(s) 351, 932, 1355, 2173, 2483
NsiI ATGCAT 1 cut(s) 2304
NspI RCATGY 4 cut(s) 245, 1280, 1471, 1670
PaeI GCATGC 1 cut(s) 1280
PagI TCATGA 2 cut(s) 1453, 2690
PaqCI CACCTGC 1 cut(s) 1859
PasI CCCWGGG 1 cut(s) 1103
PceI AGGCCT 3 cut(s) 786, 970, 2676
PctI GAATGC 3 cut(s) 823, 1660, 2666
PdmI GAANNNNTTC 1 cut(s) 2475
PfeI GAWTC 6 cut(s) 757, 1724, 1859, 2291, 2339, 2636
PflFI GACNNNGTC 1 cut(s) 1179
PflMI CCANNNNNTGG 2 cut(s) 125, 2152
PleI GAGTC 6 cut(s) 514, 655, 1269, 2014, 2111, 2386
PpsI GAGTC 6 cut(s) 514, 655, 1269, 2014, 2111, 2386
PshBI ATTAAT 1 cut(s) 2369
PsiI TTATAA 1 cut(s) 675
Psp124BI GAGCTC 1 cut(s) 625
Psp6I CCWGG 2 cut(s) 1030, 1102
PspEI GGTNACC 2 cut(s) 710, 2483
PspGI CCWGG 2 cut(s) 1030, 1102
PspN4I GGNNCC 5 cut(s) 7, 1122, 1392, 1953, 2397
PspPI GGNCC 4 cut(s) 169, 1143, 2127, 2417
PstI CTGCAG 3 cut(s) 955, 1380, 2314
PstNI CAGNNNCTG 1 cut(s) 2092
PsuI RGATCY 3 cut(s) 319, 1330, 1951
PsyI GACNNNGTC 1 cut(s) 1179
RsaI GTAC 5 cut(s) 863, 1416, 1976, 2528, 2574
RsaNI GTAC 5 cut(s) 862, 1415, 1975, 2527, 2573
RseI CAYNNNNRTG 4 cut(s) 246, 852, 1281, 1665
SacI GAGCTC 1 cut(s) 625
Sau96I GGNCC 4 cut(s) 169, 1143, 2127, 2417
ScaI AGTACT 2 cut(s) 1976, 2528
SchI GAGTC 6 cut(s) 514, 656, 1270, 2015, 2111, 2387
ScrFI CCNGG 2 cut(s) 1032, 1104
SduI GDGCHC 4 cut(s) 625, 1125, 1227, 2400
SfaNI GCATC 4 cut(s) 561, 844, 1694, 2131
SfcI CTRYAG 5 cut(s) 298, 359, 951, 1376, 2310
SinI GGWCC 3 cut(s) 169, 2127, 2417
SmiI ATTTAAAT 1 cut(s) 471
SmiMI CAYNNNNRTG 4 cut(s) 246, 852, 1281, 1665
SmlI CTYRAG 3 cut(s) 626, 1064, 1603
SmoI CTYRAG 3 cut(s) 626, 1064, 1603
SphI GCATGC 1 cut(s) 1280
SseBI AGGCCT 3 cut(s) 786, 970, 2676
SsiI CCGC 7 cut(s) 172, 373, 384, 1337, 1504, 1776, 1922
SspI AATATT 1 cut(s) 331
SspMI CTAG 3 cut(s) 524, 716, 1320
SstI GAGCTC 1 cut(s) 625
StuI AGGCCT 3 cut(s) 786, 970, 2676
StyD4I CCNGG 2 cut(s) 1030, 1102
StyI CCWWGG 3 cut(s) 124, 1507, 2010
SwaI ATTTAAAT 1 cut(s) 471
TaaI ACNGT 8 cut(s) 887, 1077, 1237, 1361, 1419, 2455, 2517, 2683
TaqI TCGA 5 cut(s) 772, 943, 1096, 1130, 1202
TaqII GACCGA 2 cut(s) 252, 2115
TatI WGTACW 4 cut(s) 861, 1414, 1974, 2526
TfiI GAWTC 6 cut(s) 757, 1724, 1859, 2291, 2339, 2636
TscAI CASTG 2 cut(s) 1469, 1870
TseFI GTSAC 5 cut(s) 351, 932, 1355, 2173, 2483
Tsp45I GTSAC 5 cut(s) 351, 932, 1355, 2173, 2483
TspGWI ACGGA 3 cut(s) 332, 2192, 2630
TspRI CASTG 2 cut(s) 1469, 1870
Tth111I GACNNNGTC 1 cut(s) 1179
Van91I CCANNNNNTGG 2 cut(s) 125, 2152
Vha464I CTTAAG 1 cut(s) 1603
VpaK11BI GGWCC 3 cut(s) 169, 2127, 2417
VspI ATTAAT 1 cut(s) 2369
XagI CCTNNNNNAGG 1 cut(s) 980
XapI RAATTY 7 cut(s) 472, 498, 1535, 1643, 2138, 2269, 2656
XbaI TCTAGA 1 cut(s) 523
XceI RCATGY 4 cut(s) 245, 1280, 1471, 1670
XcmI CCANNNNNNNNNTGG 1 cut(s) 1514
XmnI GAANNNNTTC 1 cut(s) 2475
XspI CTAG 3 cut(s) 524, 716, 1320
ZrmI AGTACT 2 cut(s) 1976, 2528
Zsp2I ATGCAT 1 cut(s) 2304
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.