Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr09

Orthogroup ID

OG0012780

Physical Location & Seq

Genomic Coordinates Reverse (-)

30335351 .. 30339279

Gene Structure 3929 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD09G1238500.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2169 bp

ATGCCCCACACCAGTGCCAAATCTCTGCAAGAAATGGGCTTTGATTCCCTCACGAACCGATTCCGTGACTCACTGAGTTACAACGACACCACTACCATCACCAACGACCACAGCAACAAGCCAGATGTCAAACAGCTCGATCTGGGTTCGCCCGTCTCGCCATTGATGACTCGGAGTTCAGCCAATGGCTGCAATGGACTCGGCCACAGCGGTGGGGCAGCAGTAACCAGTTCAAGCTGCAGTTCAGGTACTTCTTCTGGTTCAGTTTCGAGCAAAACCAGCAATACCCAGCTGGGCAGAAGATCGGATTCCAAACCCAACAACCACTCCGGCGAGCTCTCGGTTTCGTCCGAAACAAGCCCGAGAGCCTCCGAGGCGGTCCGATCCGGTACGACGCCGAGGAATTGGAAGCCGGTTCACCGGAGATCGGTGTCTGCTGGACCCCCATTGATCTACTCTGGTGCAAGCTTCAATACCAGCTTCAGTACTAATGCGAGTAGTAATACTAATACAGCAACTTCATCTTCTTCTGCTTCAATGGCGTCGACCACCACTGTTTTTCCGAGTGGCAACATTTGCCCATCTGGGAAAATCGCCAAGTCTGGATTGGTCTGTAGAGGAATCAACAAGACCGATGTTTTGGGGTCTGGCGGTGGCAACTATGGCCACGGCAGCATAGTCAGAGGAGGCGGTGGGGGTGCGAATGGCGGCGAGTCTGCGATGGCAAAGAGGGCAACTGGGAACTCTGATCCAGAGGAGGTAAAGAAATCTGCTAATGAGCTTTATAGAAGAGGCCAGTTTCTTGAGGCATTGGCATTGTATGATCGTGCCATATCCTTGTCTCCGGACAATGCTGCCTACCGGAGTAACCGTGCCGCAGCGTTAACAGCGCTGGGGAGACTTCCGGAGGCAGTGAGGGAGTGTGAGGAGGCTGTCAGGTTGGACCCTGGTTATGGGAGGGCGCATCAGCGCTTGGGTTCTCTTTATCTTCGTTTTGGGCTAGTTGAAAATGCCTACCATCACCTCTGTATTCCTGGGCAACGGCCGGATCAGTCTGAGTTGCAGAAGTTGAAGTCATTGGAGAAGCATCTGAAACAATGTGAAGATGCCCGTAAGCTTGGCGATTGGAAAAGTGTGCTAAGGGAATCTGAGGCAGCCATAGCAACTGGAGCAGAGTCCTCTCCTCAGCTTGTTGCTTGTAAAGTTGAAGCTCTACTGAAGCTACATCAGCTCGAAGATGCAGAATCTAGCCTAGCAGATATACCCAAGTTTGAAAATTACCCTCCTTACTTGCAAACCAAACTCTTTGGCATGCTTGTTGAAGCTTATGTTCTGTATGTCAGAGCCCAGGTTGAGATGGCATTAGGAAGGTTTGAGAATGCAGTAGCAGCGGTAGGGAAGGCAGGACTGATTGACTACAGTAATGTTGAAGTAATGAGGGTTTCGAATAAAGTGAAGAAGGTTGCAAATGCTCGTTCTCAGGGTAAAGATCTTTTTAGCTCTGGAAGATTTGATGAAGCCTGCTCTGCTTATGGGGAGGGCCTCAAATATGATAGTTCCAACTCTGTTCTCTATTGCAATAGAGCAGTTTGTCGGTCCAAGCTCGGACAATGGGAACAGTCTGTTGAAGACTGCAACCAAGCCCTAAAGATTCAACCTAATTACATCAAAGCTCTTCTTCGAAGGGCTGCCTCAAATGCAAAGCTTGAACGATGGGCAGAGGCAGTGAGAGATTATGAGGCCTTAAGGAGGGACCTTCCTGGAGACAATGAGGTTGCTGAGTCTCTACACCGGGCACGAGTTGCATTAAACAAGTCTCGTGGAGAGGAATTTCATAATGTGAAGTTTGATGGTGAAGTGGAAGAAGTCTCTAGTTTGGATAAATTTAAAGCTGCGATATCATCACCCGGTGTTTCCGTCGTCCATTTCAAAGTTGAATCCAACGAACAATGCGCAGAAATATCGCCATTCATAAATATGCTTTGTGTTCGATATCCATATGTTCACTTTTTTAAGGTGGACGTAGAGGAGAGCTTATCCGTAGCAAAAGCGGAGAGCATAAGAACCGTTCCAGCGTTTAAAATTTACAAAAATGGAGAAAAGGTGAGGGAGATGGTCCGTCCAACCCATCAATTCCTGGAAGAATCGGTGAGAAGCTGCAATCTCTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003002 GO:0006950 GO:0006970 GO:0007154 GO:0007165 GO:0007275 GO:0007389 GO:0008150 GO:0009628 GO:0009719 GO:0009725 GO:0009733 GO:0009734 GO:0009741 GO:0009742 GO:0009755 GO:0009987 GO:0010033 GO:0010051 GO:0010305 GO:0014070 GO:0023052 GO:0032501 GO:0032502 GO:0032870 GO:0033993 GO:0042221 GO:0043401 GO:0048545 GO:0048856 GO:0050789 GO:0050794 GO:0050896 GO:0051716 GO:0065007 GO:0070887 GO:0071310 GO:0071365 GO:0071367 GO:0071383 GO:0071396 GO:0071407 GO:0071495 GO:1901700 GO:1901701

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

TPR_1 TPR_11 TPR_16 TPR_19 TPR_2 TPR_6 TPR_8 Thioredoxin

Protein Analysis

723

Amino Acids

78.25

Weight (kDa)

8.76

Isoelectric Point (pI)

43.52

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
TPR_16	PF13432	258 - 318	1.1e-08	Tetratricopeptide repeat
TPR_11	PF13414	259 - 295	3.6e-07	TPR repeat
TPR_1	PF00515	524 - 555	1.2e-07	Tetratricopeptide repeat
Thioredoxin	PF00085	626 - 709	7.7e-10	Thioredoxin

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0012780)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G42580 AT3G58620 AT3G58620
malus_domestica	MD09G1238500.v1.1
prunus_persica	Prupe.3G121600_v2.0.a1 Prupe.3G121600_v2.0.a1
pyrus_communis	pycom09g15720
rosa_chinensis	RchiOBHm_Chr2g0129261
rosa_laevigata	RLG00000019069
rosa_multiflora	Rmu_sc0005230.1_g000009
rosa_roxburghii	Rroxscaffold_1G00034740 Rroxscaffold_2G00114720
rosa_rugosa	Rorug02G0285900
rosa_samantha	Rh2AG337700 Rh2BG345500 Rh2CG325100 Rh2DG363000
rosa_wichuraiana	Rw2G027390

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc16I	TGCGCA	1 cut(s)	1954
AccI	GTMKAC	1 cut(s)	545
AccIII	TCCGGA	2 cut(s)	844, 904
AciI	CCGC	8 cut(s)	210, 377, 651, 690, 708, 876, 1391, 2051
AclWI	GGATC	3 cut(s)	378, 743, 1056
AcoI	YGGCCR	3 cut(s)	202, 664, 1043
AcsI	RAATTY	3 cut(s)	1829, 1883, 2082
AcuI	CTGAAG	2 cut(s)	466, 1238
AcyI	GRCGYC	2 cut(s)	395, 542
AdeI	CACNNNGTG	1 cut(s)	1910
AfaI	GTAC	3 cut(s)	250, 391, 487
AfeI	AGCGCT	2 cut(s)	891, 971
AfiI	CCNNNNNNNGG	3 cut(s)	427, 953, 1749
AflII	CTTAAG	1 cut(s)	1744
AjnI	CCWGG	5 cut(s)	946, 1033, 1347, 1759, 2136
AleI	CACNNNNGTG	2 cut(s)	12, 210
Alw21I	GWGCWC	1 cut(s)	339
Alw26I	GTCTC	7 cut(s)	160, 846, 892, 1758, 1788, 1821, 1873
AlwI	GGATC	3 cut(s)	378, 743, 1056
Ama87I	CYCGRG	1 cut(s)	361
Aor13HI	TCCGGA	2 cut(s)	844, 904
Aor51HI	AGCGCT	2 cut(s)	891, 971
AoxI	GGCC	6 cut(s)	202, 664, 793, 1043, 1540, 1740
ApoI	RAATTY	3 cut(s)	1829, 1883, 2082
ArsI	GACNNNNNNTTYG	2 cut(s)	622, 654
Asp700I	GAANNNNTTC	1 cut(s)	59
AspLEI	GCGC	4 cut(s)	892, 964, 972, 1955
AspS9I	GGNCC	7 cut(s)	379, 440, 943, 1540, 1596, 1753, 2116
AsuC2I	CCSGG	2 cut(s)	1793, 1908
AsuHPI	GGTGA	7 cut(s)	91, 410, 1013, 1865, 1896, 2116, 2161
AsuII	TTCGAA	2 cut(s)	1445, 1681
AvaI	CYCGRG	1 cut(s)	361
AvaII	GGWCC	6 cut(s)	379, 440, 943, 1596, 1753, 2116
BaeGI	GKGCMC	1 cut(s)	1798
BalI	TGGCCA	1 cut(s)	666
BanII	GRGCYC	2 cut(s)	339, 1348
BauI	CACGAG	2 cut(s)	1797, 1818
BbsI	GAAGAC	1 cut(s)	1635
Bbv12I	GWGCWC	1 cut(s)	339
BbvCI	CCTCAGC	1 cut(s)	1185
BccI	CCATC	9 cut(s)	104, 589, 715, 1026, 1351, 1707, 1844, 2107, 2136
BceAI	ACGGC	2 cut(s)	685, 1058
BcgI	CGANNNNNNTGC	4 cut(s)	181, 215, 1944, 1978
BciT130I	CCWGG	5 cut(s)	948, 1035, 1349, 1761, 2138
BcnI	CCSGG	2 cut(s)	1793, 1908
BcoDI	GTCTC	7 cut(s)	160, 846, 892, 1758, 1788, 1821, 1873
BfaI	CTAG	5 cut(s)	1001, 1248, 1253, 1872, 2167
BfmI	CTRYAG	3 cut(s)	238, 613, 1417
BfoI	RGCGCY	2 cut(s)	893, 973
BfrI	CTTAAG	1 cut(s)	1744
BglI	GCCNNNNNGGC	1 cut(s)	374
BglII	AGATCT	1 cut(s)	1489
BmcAI	AGTACT	1 cut(s)	487
Bme1390I	CCNGG	7 cut(s)	948, 1035, 1349, 1761, 1793, 1908, 2138
Bme18I	GGWCC	6 cut(s)	379, 440, 943, 1596, 1753, 2116
BmeT110I	CYCGRG	1 cut(s)	361
BmgT120I	GGNCC	7 cut(s)	379, 440, 943, 1540, 1596, 1753, 2116
BmiI	GGNNCC	3 cut(s)	442, 945, 1754
BmrFI	CCNGG	7 cut(s)	948, 1035, 1349, 1761, 1793, 1908, 2138
BmrI	ACTGGG	1 cut(s)	747
BmsI	GCATC	4 cut(s)	973, 1096, 1096, 1228
BmuI	ACTGGG	1 cut(s)	747
BpiI	GAAGAC	1 cut(s)	1635
BpmI	CTGGAG	2 cut(s)	1188, 1782
Bpu10I	CCTNAGC	2 cut(s)	1139, 1185
Bpu14I	TTCGAA	2 cut(s)	1445, 1681
BpuEI	CTTGAG	1 cut(s)	824
BpuMI	CCSGG	2 cut(s)	1793, 1908
BsaHI	GRCGYC	2 cut(s)	395, 542
BsaJI	CCNNGG	6 cut(s)	372, 398, 667, 946, 1034, 1347
BsaWI	WCCGGW	5 cut(s)	386, 420, 844, 861, 904
BsaXI	ACNNNNNCTCC	6 cut(s)	311, 341, 856, 886, 2088, 2118
Bsc4I	CCNNNNNNNGG	3 cut(s)	427, 953, 1749
Bse118I	RCCGGY	1 cut(s)	412
Bse1I	ACTGG	5 cut(s)	12, 228, 742, 796, 1171
Bse3DI	GCAATG	1 cut(s)	199
BseAI	TCCGGA	2 cut(s)	844, 904
BseBI	CCWGG	5 cut(s)	948, 1035, 1349, 1761, 2138
BseDI	CCNNGG	6 cut(s)	372, 398, 667, 946, 1034, 1347
BseLI	CCNNNNNNNGG	3 cut(s)	427, 953, 1749
BseMI	GCAATG	1 cut(s)	199
BseMII	CTCAG	6 cut(s)	65, 1047, 1140, 1199, 1493, 1770
BseNI	ACTGG	5 cut(s)	12, 228, 742, 796, 1171
BseRI	GAGGAG	5 cut(s)	699, 770, 941, 1173, 2042
BseSI	GKGCMC	1 cut(s)	1798
BseX3I	CGGCCG	1 cut(s)	1043
BseYI	CCCAGC	3 cut(s)	288, 292, 892
Bsh1285I	CGRYCG	1 cut(s)	1046
BshFI	GGCC	6 cut(s)	204, 666, 795, 1045, 1542, 1742
BsiEI	CGRYCG	1 cut(s)	1046
BsiHKAI	GWGCWC	1 cut(s)	339
BsiHKCI	CYCGRG	1 cut(s)	361
BslFI	GGGAC	1 cut(s)	1766
BslI	CCNNNNNNNGG	3 cut(s)	427, 953, 1749
BsmAI	GTCTC	7 cut(s)	160, 846, 892, 1758, 1788, 1821, 1873
BsmBI	CGTCTC	1 cut(s)	160
BsmFI	GGGAC	1 cut(s)	1766
BsmI	GAATGC	1 cut(s)	1384
BsnI	GGCC	6 cut(s)	204, 666, 795, 1045, 1542, 1742
BsoBI	CYCGRG	1 cut(s)	361
Bsp119I	TTCGAA	2 cut(s)	1445, 1681
Bsp1286I	GDGCHC	3 cut(s)	339, 1348, 1798
Bsp13I	TCCGGA	2 cut(s)	844, 904
Bsp143I	GATC	9 cut(s)	139, 302, 383, 425, 450, 748, 823, 1048, 1489
BspACI	CCGC	8 cut(s)	210, 377, 651, 690, 708, 876, 1391, 2051
BspANI	GGCC	6 cut(s)	204, 666, 795, 1045, 1542, 1742
BspCNI	CTCAG	6 cut(s)	66, 1048, 1141, 1198, 1492, 1771
BspEI	TCCGGA	2 cut(s)	844, 904
BspLI	GGNNCC	3 cut(s)	442, 945, 1754
BspMAI	CTGCAG	1 cut(s)	242
BspPI	GGATC	3 cut(s)	378, 743, 1056
BspQI	GCTCTTC	1 cut(s)	1680
BspT104I	TTCGAA	2 cut(s)	1445, 1681
BspTI	CTTAAG	1 cut(s)	1744
BsrDI	GCAATG	1 cut(s)	199
BsrFI	RCCGGY	1 cut(s)	412
BsrI	ACTGG	5 cut(s)	12, 228, 742, 796, 1171
BssAI	RCCGGY	1 cut(s)	412
BssECI	CCNNGG	6 cut(s)	372, 398, 667, 946, 1034, 1347
BssMI	GATC	9 cut(s)	139, 302, 383, 425, 450, 748, 823, 1048, 1489
BssNI	GRCGYC	2 cut(s)	395, 542
BssSI	CACGAG	2 cut(s)	1797, 1818
Bst2BI	CACGAG	2 cut(s)	1797, 1818
Bst2UI	CCWGG	5 cut(s)	948, 1035, 1349, 1761, 2138
Bst4CI	ACNGT	5 cut(s)	556, 872, 1421, 1620, 2068
Bst6I	CTCTTC	2 cut(s)	784, 1680
BstACI	GRCGYC	2 cut(s)	395, 542
BstAFI	CTTAAG	1 cut(s)	1744
BstAPI	GCANNNNNTGC	2 cut(s)	576, 1802
BstBI	TTCGAA	2 cut(s)	1445, 1681
BstC8I	GCNNGC	4 cut(s)	335, 466, 1313, 1522
BstDEI	CTNAG	7 cut(s)	74, 1056, 1139, 1149, 1185, 1479, 1779
BstDSI	CCRYGG	1 cut(s)	667
BstENI	CCTNNNNNAGG	1 cut(s)	1747
BstH2I	RGCGCY	2 cut(s)	893, 973
BstHHI	GCGC	4 cut(s)	892, 964, 972, 1955
BstKTI	GATC	9 cut(s)	142, 305, 386, 428, 453, 751, 826, 1051, 1492
BstMAI	GTCTC	7 cut(s)	160, 846, 892, 1758, 1788, 1821, 1873
BstMBI	GATC	9 cut(s)	139, 302, 383, 425, 450, 748, 823, 1048, 1489
BstMCI	CGRYCG	1 cut(s)	1046
BstNI	CCWGG	5 cut(s)	948, 1035, 1349, 1761, 2138
BstNSI	RCATGY	1 cut(s)	1315
BstSCI	CCNGG	7 cut(s)	946, 1033, 1347, 1759, 1791, 1906, 2136
BstSFI	CTRYAG	3 cut(s)	238, 613, 1417
BstSLI	GKGCMC	1 cut(s)	1798
BstV2I	GAAGAC	1 cut(s)	1635
BstX2I	RGATCY	1 cut(s)	1489
BstXI	CCANNNNNNTGG	1 cut(s)	212
BstYI	RGATCY	1 cut(s)	1489
BstZI	CGGCCG	1 cut(s)	1043
BsuRI	GGCC	6 cut(s)	204, 666, 795, 1045, 1542, 1742
BtgI	CCRYGG	1 cut(s)	667
BtgZI	GCGATG	1 cut(s)	734
BtsI	GCAGTG	2 cut(s)	918, 1731
BtsIMutI	CAGTG	5 cut(s)	19, 71, 552, 918, 1731
Cac8I	GCNNGC	4 cut(s)	335, 466, 1313, 1522
CfoI	GCGC	4 cut(s)	892, 964, 972, 1955
Cfr10I	RCCGGY	1 cut(s)	412
Cfr13I	GGNCC	7 cut(s)	379, 440, 943, 1540, 1596, 1753, 2116
CpoI	CGGWCCG	1 cut(s)	379
CseI	GACGC	2 cut(s)	403, 531
Csp6I	GTAC	3 cut(s)	249, 390, 486
CspCI	CAANNNNNGTGG	2 cut(s)	1801, 1836
CspI	CGGWCCG	1 cut(s)	379
CviAII	CATG	1 cut(s)	1312
CviQI	GTAC	3 cut(s)	249, 390, 486
DdeI	CTNAG	7 cut(s)	74, 1056, 1139, 1149, 1185, 1479, 1779
DpnI	GATC	9 cut(s)	141, 304, 385, 427, 452, 750, 825, 1050, 1491
DpnII	GATC	9 cut(s)	139, 302, 383, 425, 450, 748, 823, 1048, 1489
DraI	TTTAAA	2 cut(s)	1888, 2080
DraIII	CACNNNGTG	1 cut(s)	1910
EaeI	YGGCCR	3 cut(s)	202, 664, 1043
EagI	CGGCCG	1 cut(s)	1043
Eam1104I	CTCTTC	2 cut(s)	784, 1680
EarI	CTCTTC	2 cut(s)	784, 1680
Ecl136II	GAGCTC	1 cut(s)	337
EclXI	CGGCCG	1 cut(s)	1043
Eco147I	AGGCCT	1 cut(s)	1742
Eco24I	GRGCYC	2 cut(s)	339, 1348
Eco32I	GATATC	2 cut(s)	1899, 1994
Eco47I	GGWCC	6 cut(s)	379, 440, 943, 1596, 1753, 2116
Eco47III	AGCGCT	2 cut(s)	891, 971
Eco52I	CGGCCG	1 cut(s)	1043
Eco53kI	GAGCTC	1 cut(s)	337
Eco57I	CTGAAG	2 cut(s)	466, 1238
Eco88I	CYCGRG	1 cut(s)	361
EcoICRI	GAGCTC	1 cut(s)	337
EcoNI	CCTNNNNNAGG	1 cut(s)	1747
EcoO109I	RGGNCCY	2 cut(s)	1540, 1753
EcoRII	CCWGG	5 cut(s)	946, 1033, 1347, 1759, 2136
EcoRV	GATATC	2 cut(s)	1899, 1994
EcoT38I	GRGCYC	2 cut(s)	339, 1348
Esp3I	CGTCTC	1 cut(s)	160
FaeI	CATG	1 cut(s)	1315
FalI	AAGNNNNNCTT	2 cut(s)	1662, 1694
FaqI	GGGAC	1 cut(s)	1766
FatI	CATG	1 cut(s)	1311
FauNDI	CATATG	1 cut(s)	1999
FblI	GTMKAC	1 cut(s)	545
FriOI	GRGCYC	2 cut(s)	339, 1348
FspBI	CTAG	5 cut(s)	1001, 1248, 1253, 1872, 2167
FspI	TGCGCA	1 cut(s)	1954
GlaI	GCGC	4 cut(s)	891, 963, 971, 1954
GsaI	CCCAGC	3 cut(s)	292, 296, 896
GsuI	CTGGAG	2 cut(s)	1188, 1782
HaeII	RGCGCY	2 cut(s)	893, 973
HaeIII	GGCC	6 cut(s)	204, 666, 795, 1045, 1542, 1742
HgaI	GACGC	2 cut(s)	403, 531
HhaI	GCGC	4 cut(s)	892, 964, 972, 1955
Hin1I	GRCGYC	2 cut(s)	395, 542
Hin1II	CATG	1 cut(s)	1315
Hin6I	GCGC	4 cut(s)	890, 962, 970, 1953
HinP1I	GCGC	4 cut(s)	890, 962, 970, 1953
HincII	GTYRAC	2 cut(s)	546, 885
HindII	GTYRAC	2 cut(s)	546, 885
HindIII	AAGCTT	4 cut(s)	466, 1115, 1323, 1703
HpaI	GTTAAC	1 cut(s)	885
HphI	GGTGA	7 cut(s)	91, 410, 1013, 1865, 1896, 2116, 2161
Hpy166II	GTNNAC	5 cut(s)	418, 546, 885, 2005, 2020
Hpy188III	TCNNGA	7 cut(s)	52, 603, 752, 803, 845, 905, 1503
Hpy8I	GTNNAC	5 cut(s)	418, 546, 885, 2005, 2020
Hpy99I	CGWCG	3 cut(s)	397, 547, 1922
HpyAV	CCTTC	5 cut(s)	1362, 1393, 1453, 1677, 1766
HpyCH4III	ACNGT	5 cut(s)	556, 872, 1421, 1620, 2068
HpyCH4IV	ACGT	1 cut(s)	2022
HpyF3I	CTNAG	7 cut(s)	74, 1056, 1139, 1149, 1185, 1479, 1779
HpySE526I	ACGT	1 cut(s)	2022
Hsp92I	GRCGYC	2 cut(s)	395, 542
Hsp92II	CATG	1 cut(s)	1315
HspAI	GCGC	4 cut(s)	890, 962, 970, 1953
Kpn2I	TCCGGA	2 cut(s)	844, 904
KspAI	GTTAAC	1 cut(s)	885
Kzo9I	GATC	9 cut(s)	139, 302, 383, 425, 450, 748, 823, 1048, 1489
LguI	GCTCTTC	1 cut(s)	1680
LmnI	GCTCC	1 cut(s)	1169
LweI	GCATC	4 cut(s)	973, 1096, 1096, 1228
MaeI	CTAG	5 cut(s)	1001, 1248, 1253, 1872, 2167
MaeII	ACGT	1 cut(s)	2022
MaeIII	GTNAC	4 cut(s)	65, 77, 223, 866
MalI	GATC	9 cut(s)	141, 304, 385, 427, 452, 750, 825, 1050, 1491
MboI	GATC	9 cut(s)	139, 302, 383, 425, 450, 748, 823, 1048, 1489
MflI	RGATCY	1 cut(s)	1489
MhlI	GDGCHC	3 cut(s)	339, 1348, 1798
MlsI	TGGCCA	1 cut(s)	666
MluCI	AATT	7 cut(s)	403, 1276, 1660, 1829, 1883, 2082, 2132
MluNI	TGGCCA	1 cut(s)	666
MlyI	GAGTC	6 cut(s)	62, 163, 192, 722, 1184, 1790
MmeI	TCCRAC	4 cut(s)	921, 1584, 1965, 2147
Mox20I	TGGCCA	1 cut(s)	666
MroI	TCCGGA	2 cut(s)	844, 904
MroXI	GAANNNNTTC	1 cut(s)	59
MscI	TGGCCA	1 cut(s)	666
MseI	TTAA	6 cut(s)	884, 1745, 1808, 1887, 2013, 2079
MslI	CAYNNNNRTG	3 cut(s)	12, 210, 1976
Msp20I	TGGCCA	1 cut(s)	666
MspA1I	CMGCKG	3 cut(s)	210, 292, 1391
MspCI	CTTAAG	1 cut(s)	1744
MspR9I	CCNGG	7 cut(s)	948, 1035, 1349, 1761, 1793, 1908, 2138
Mva1269I	GAATGC	1 cut(s)	1384
MvaI	CCWGG	5 cut(s)	948, 1035, 1349, 1761, 2138
NciI	CCSGG	2 cut(s)	1793, 1908
NdeI	CATATG	1 cut(s)	1999
NdeII	GATC	9 cut(s)	139, 302, 383, 425, 450, 748, 823, 1048, 1489
NlaIII	CATG	1 cut(s)	1315
NlaIV	GGNNCC	3 cut(s)	442, 945, 1754
NmeAIII	GCCGAG	2 cut(s)	180, 423
NmuCI	GTSAC	1 cut(s)	65
NsbI	TGCGCA	1 cut(s)	1954
NspI	RCATGY	1 cut(s)	1315
NspV	TTCGAA	2 cut(s)	1445, 1681
OliI	CACNNNNGTG	2 cut(s)	12, 210
PaeI	GCATGC	1 cut(s)	1315
PceI	AGGCCT	1 cut(s)	1742
PciSI	GCTCTTC	1 cut(s)	1680
PctI	GAATGC	1 cut(s)	1384
PdmI	GAANNNNTTC	1 cut(s)	59
PfeI	GAWTC	9 cut(s)	44, 60, 308, 621, 1145, 1244, 1651, 1937, 2144
PfoI	TCCNGGA	2 cut(s)	1759, 2136
PleI	GAGTC	6 cut(s)	62, 163, 192, 721, 1183, 1789
PpsI	GAGTC	6 cut(s)	62, 163, 192, 721, 1183, 1789
PpuMI	RGGWCCY	1 cut(s)	1753
Psp124BI	GAGCTC	1 cut(s)	339
Psp5II	RGGWCCY	1 cut(s)	1753
Psp6I	CCWGG	5 cut(s)	946, 1033, 1347, 1759, 2136
PspFI	CCCAGC	3 cut(s)	288, 292, 892
PspGI	CCWGG	5 cut(s)	946, 1033, 1347, 1759, 2136
PspN4I	GGNNCC	3 cut(s)	442, 945, 1754
PspPI	GGNCC	7 cut(s)	379, 440, 943, 1540, 1596, 1753, 2116
PspPPI	RGGWCCY	1 cut(s)	1753
PstI	CTGCAG	1 cut(s)	242
PsuI	RGATCY	1 cut(s)	1489
PvuII	CAGCTG	1 cut(s)	292
RsaI	GTAC	3 cut(s)	250, 391, 487
RsaNI	GTAC	3 cut(s)	249, 390, 486
RseI	CAYNNNNRTG	3 cut(s)	12, 210, 1976
Rsr2I	CGGWCCG	1 cut(s)	379
RsrII	CGGWCCG	1 cut(s)	379
SacI	GAGCTC	1 cut(s)	339
SalI	GTCGAC	1 cut(s)	544
SapI	GCTCTTC	1 cut(s)	1680
SaqAI	TTAA	6 cut(s)	884, 1745, 1808, 1887, 2013, 2079
Sau3AI	GATC	9 cut(s)	139, 302, 383, 425, 450, 748, 823, 1048, 1489
Sau96I	GGNCC	7 cut(s)	379, 440, 943, 1540, 1596, 1753, 2116
ScaI	AGTACT	1 cut(s)	487
SchI	GAGTC	6 cut(s)	62, 163, 192, 722, 1184, 1790
ScrFI	CCNGG	7 cut(s)	948, 1035, 1349, 1761, 1793, 1908, 2138
SduI	GDGCHC	3 cut(s)	339, 1348, 1798
SfaNI	GCATC	4 cut(s)	973, 1096, 1096, 1228
SfcI	CTRYAG	3 cut(s)	238, 613, 1417
SfuI	TTCGAA	2 cut(s)	1445, 1681
SinI	GGWCC	6 cut(s)	379, 440, 943, 1596, 1753, 2116
SmiMI	CAYNNNNRTG	3 cut(s)	12, 210, 1976
SmlI	CTYRAG	2 cut(s)	803, 1744
SmoI	CTYRAG	2 cut(s)	803, 1744
SphI	GCATGC	1 cut(s)	1315
Sse9I	AATT	7 cut(s)	403, 1276, 1660, 1829, 1883, 2082, 2132
SseBI	AGGCCT	1 cut(s)	1742
SsiI	CCGC	8 cut(s)	210, 377, 651, 690, 708, 876, 1391, 2051
SspMI	CTAG	5 cut(s)	1001, 1248, 1253, 1872, 2167
SstI	GAGCTC	1 cut(s)	339
StuI	AGGCCT	1 cut(s)	1742
StyD4I	CCNGG	7 cut(s)	946, 1033, 1347, 1759, 1791, 1906, 2136
TaaI	ACNGT	5 cut(s)	556, 872, 1421, 1620, 2068
TaiI	ACGT	1 cut(s)	2025
TaqI	TCGA	7 cut(s)	138, 269, 545, 1233, 1445, 1681, 1990
TaqII	GACCGA	2 cut(s)	647, 1584
TasI	AATT	7 cut(s)	403, 1276, 1660, 1829, 1883, 2082, 2132
TatI	WGTACW	1 cut(s)	485
TauI	GCSGC	2 cut(s)	711, 878
TfiI	GAWTC	9 cut(s)	44, 60, 308, 621, 1145, 1244, 1651, 1937, 2144
Tru1I	TTAA	6 cut(s)	884, 1745, 1808, 1887, 2013, 2079
Tru9I	TTAA	6 cut(s)	884, 1745, 1808, 1887, 2013, 2079
TscAI	CASTG	5 cut(s)	19, 78, 559, 918, 1731
TseFI	GTSAC	1 cut(s)	65
Tsp45I	GTSAC	1 cut(s)	65
TspDTI	ATGAA	4 cut(s)	510, 1530, 1823, 1960
TspGWI	ACGGA	4 cut(s)	53, 1906, 2029, 2108
TspRI	CASTG	5 cut(s)	19, 78, 559, 918, 1731
Vha464I	CTTAAG	1 cut(s)	1744
VpaK11BI	GGWCC	6 cut(s)	379, 440, 943, 1596, 1753, 2116
XagI	CCTNNNNNAGG	1 cut(s)	1747
XapI	RAATTY	3 cut(s)	1829, 1883, 2082
XceI	RCATGY	1 cut(s)	1315
XcmI	CCANNNNNNNNNTGG	1 cut(s)	604
XmiI	GTMKAC	1 cut(s)	545
XmnI	GAANNNNTTC	1 cut(s)	59
XspI	CTAG	5 cut(s)	1001, 1248, 1253, 1872, 2167
ZrmI	AGTACT	1 cut(s)	487

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.