Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr2A

Orthogroup ID

OG0012780

Physical Location & Seq

Genomic Coordinates Forward (+)

48983941 .. 48989076

Gene Structure 5136 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh2AG337700.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1749 bp

ATGCCCCAGGCAGGCAAATCCACCCAAGAACCGGGTTTCGACTCGCTCCCGACTCGCTTCCGTGACTCAGTCACTTGCAATGACGACCATAATAAGAACAAGCCCGATTTCAAAGAGCTCGATCTGGGCGGCTCACCCGTCTCGCCCTTGATGACCAGGACCTCAGTGAACGGCGTTAACAACAATGGAGGTGGCGCCGCCACTACTTCCAGCTCCAGTTCGAGCTCTTCCGGTTCGGTTTCCAGCAAAACCCAGCTGGGGAGAAGATCCGACGGCAGTAGACCCAACAACCACTCCGGCGAGCTAACTGTCTCCTCCGAAATGAGCCCCAGAGCTTCCGAGAGCGCCCGATCCGGTACCACGCCGCGTAATTGGAAGCCGGAGCATCGGAGATCGGTCTCCGCCGGACCGCCGTTGATCTACTCCGGCAAAACGTTCACCGGCGGTAGTAACGTTAGTGCCGGGGGTAGTGTTGGTAATGCTTGTGGAAATGTAGCAACCAATAATTCATCTTCAACCTCCACAACCGTGTTCCCCAGCGGCAATATATGCCCTTCCGGGAAAATTACGAAGTCTGGAATTGTGTGGAGAGCCAGCAGTAAGACTGATGTTTTGGGTTCGGGGTGCGGCAACTACGGCCACGGTAGCATAGTTCGAGGGGTTTCGAAATCGGATGCTACTAGTTCGAATGTGGGTGGCAACTTGCAGATTGGTGGGGAGCCTGTGGTGGTTAAGAGGGCAATGGGGAACTCTGATCCAGAGGAGGTGAAGAAGGCTGGGAATGAGATGTATAAGAAAGGCCATTTTGCGGAGGCATTGACAATGTATGATCGCGCTGTGTCTTTGTCTCCGGACAATGCTGCTTACCGGAGTAACAGGGCGGCGGCATTGACCGCTCTGGGGCGGCTGGCCGAGGCTGTGAGGGAGTGTGAGGAGGCTGTCAGGTTGGACCCTGGTTATGGGAGGGCGCATCAACGGCTTGGTTCGCTTTATCTTCGTTTTGGGCTAGCGGAAAATGCCTCCCACCACCTCTCATTTCCTGGACAAAGGCCAGAACAGTCTGAGTTGCAGAAGTTGAAGTCACTGGAGAAGCATCTGAAACAATGTTCAGATGCCCGTAAGCTTGGTGATTGGAAGAATGTGCTAAGGGAATCGGATGCAGCCATAGAAATGGGACTGGAGTCCTCCCCTCAGCTTGTGGCGTCCAAGGCAGAAGCTCTATTGAAGCTCCATAAACTCGAAGATGCAGAATCCATCCTATCAAATATACCTAAGTTTGAAAATTACCCTTCTTCCTGCTTGCAAACCAAATTATTTGGCATGCTCGTTGAAGCTTATGTACTCTATGTAAGGGCCCAGGTTGAAATGGCATTCGGAAGGTTTGAGAATGCAGTAGCAGCTGTAGAGAAGGCTGGTGTAATCGATTACAGCAATGTTGAAGTTACAAGGGTATCAAATATTGTGAAAATGGTTGCGAAAGCTCGTTCTCAAGGTAACGATCTTTTTAGCTCTGGAAGGTTTGCTGAAGCCTGCGCTGCTTATGGGGAGGGCCTCAAGTATGATAGTTCCAATTCTGTTCTATACTGCAATAGAGCAGTTTGCTGGTCTAAGCTTGGACAATGGGAACAGTCTGTTGAAGACTGCAACCAAGCCCTCAAGATTCAGCCTCATTACACCAAAGCCCTTCTAAGAAGGGCTGTGTCGAATGCAAAGGTAATTTTTCCTTCATACGTGCATGTGAGTAGGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003002 GO:0006950 GO:0006970 GO:0007154 GO:0007165 GO:0007275 GO:0007389 GO:0008150 GO:0009628 GO:0009719 GO:0009725 GO:0009733 GO:0009734 GO:0009741 GO:0009742 GO:0009755 GO:0009987 GO:0010033 GO:0010051 GO:0010305 GO:0014070 GO:0023052 GO:0032501 GO:0032502 GO:0032870 GO:0033993 GO:0042221 GO:0043401 GO:0048545 GO:0048856 GO:0050789 GO:0050794 GO:0050896 GO:0051716 GO:0065007 GO:0070887 GO:0071310 GO:0071365 GO:0071367 GO:0071383 GO:0071396 GO:0071407 GO:0071495 GO:1901700 GO:1901701

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

TPR_1 TPR_11 TPR_16 TPR_19 TPR_2 TPR_6 TPR_8 Thioredoxin

Protein Analysis

582

Amino Acids

62.27

Weight (kDa)

9.16

Isoelectric Point (pI)

50.33

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
TPR_16	PF13432	259 - 320	6.4e-09	Tetratricopeptide repeat
TPR_11	PF13414	260 - 301	2.9e-07	TPR repeat
TPR_1	PF00515	527 - 558	1.3e-07	Tetratricopeptide repeat

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0012780)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G42580 AT3G58620 AT3G58620
malus_domestica	MD09G1238500.v1.1
prunus_persica	Prupe.3G121600_v2.0.a1 Prupe.3G121600_v2.0.a1
pyrus_communis	pycom09g15720
rosa_chinensis	RchiOBHm_Chr2g0129261
rosa_laevigata	RLG00000019069
rosa_multiflora	Rmu_sc0005230.1_g000009
rosa_roxburghii	Rroxscaffold_1G00034740 Rroxscaffold_2G00114720
rosa_rugosa	Rorug02G0285900
rosa_samantha	Rh2AG337700 Rh2BG345500 Rh2CG325100 Rh2DG363000
rosa_wichuraiana	Rw2G027390

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc65I	GGTACC	1 cut(s)	356
AccB1I	GGYRCC	2 cut(s)	194, 356
AccBSI	CCGCTC	1 cut(s)	896
AccI	GTMKAC	1 cut(s)	280
AccII	CGCG	2 cut(s)	367, 834
AccIII	TCCGGA	1 cut(s)	850
AclI	AACGTT	2 cut(s)	434, 453
AclWI	GGATC	3 cut(s)	261, 345, 749
AcoI	YGGCCR	2 cut(s)	637, 909
AcuI	CTGAAG	1 cut(s)	1545
AcyI	GRCGYC	2 cut(s)	195, 1202
AfaI	GTAC	2 cut(s)	358, 1341
AfiI	CCNNNNNNNGG	6 cut(s)	11, 31, 258, 808, 900, 959
AgsI	TTSAA	9 cut(s)	112, 516, 1078, 1225, 1280, 1331, 1364, 1439, 1637
AhlI	ACTAGT	1 cut(s)	680
AjnI	CCWGG	5 cut(s)	6, 155, 952, 1039, 1356
AleI	CACNNNNGTG	1 cut(s)	527
Alw21I	GWGCWC	2 cut(s)	120, 227
Alw26I	GTCTC	4 cut(s)	145, 316, 403, 852
AlwI	GGATC	3 cut(s)	261, 345, 749
Aor13HI	TCCGGA	1 cut(s)	850
AoxI	GGCC	6 cut(s)	637, 799, 909, 1049, 1353, 1549
ApaI	GGGCCC	1 cut(s)	1357
ApeKI	GCWGC	4 cut(s)	860, 1160, 1397, 1535
ArsI	GACNNNNNNTTYG	2 cut(s)	595, 627
Asp718I	GGTACC	1 cut(s)	356
AspLEI	GCGC	5 cut(s)	197, 347, 836, 970, 1535
AspS9I	GGNCC	6 cut(s)	159, 407, 949, 1353, 1354, 1549
AsuC2I	CCSGG	3 cut(s)	33, 463, 559
AsuHPI	GGTGA	4 cut(s)	126, 430, 778, 1139
AsuII	TTCGAA	2 cut(s)	665, 686
AsuNHI	GCTAGC	1 cut(s)	1006
AvaII	GGWCC	3 cut(s)	159, 407, 949
BaeGI	GKGCMC	1 cut(s)	1357
BaeI	ACNNNNGTAYC	2 cut(s)	1434, 1467
BanI	GGYRCC	2 cut(s)	194, 356
BanII	GRGCYC	4 cut(s)	120, 227, 329, 1357
BarI	GAAGNNNNNNTAC	2 cut(s)	1323, 1355
BbsI	GAAGAC	1 cut(s)	1644
Bbv12I	GWGCWC	2 cut(s)	120, 227
BbvCI	CCTCAGC	1 cut(s)	1191
BbvI	GCAGC	4 cut(s)	847, 1172, 1409, 1522
BccI	CCATC	1 cut(s)	1262
BceAI	ACGGC	5 cut(s)	187, 289, 397, 652, 992
BciT130I	CCWGG	5 cut(s)	8, 157, 954, 1041, 1358
BcnI	CCSGG	3 cut(s)	33, 463, 559
BcoDI	GTCTC	4 cut(s)	145, 316, 403, 852
BcuI	ACTAGT	1 cut(s)	680
BfaI	CTAG	2 cut(s)	681, 1007
BfmI	CTRYAG	1 cut(s)	1401
BfoI	RGCGCY	2 cut(s)	198, 348
Bme1390I	CCNGG	8 cut(s)	8, 33, 157, 463, 559, 954, 1041, 1358
Bme18I	GGWCC	3 cut(s)	159, 407, 949
BmgT120I	GGNCC	6 cut(s)	159, 407, 949, 1353, 1354, 1549
BmiI	GGNNCC	5 cut(s)	196, 358, 720, 951, 1355
BmrFI	CCNGG	8 cut(s)	8, 33, 157, 463, 559, 954, 1041, 1358
BmsI	GCATC	7 cut(s)	394, 664, 979, 1102, 1102, 1147, 1234
BmtI	GCTAGC	1 cut(s)	1010
BoxI	GACNNNNGTC	1 cut(s)	1180
BpiI	GAAGAC	1 cut(s)	1644
BpmI	CTGGAG	3 cut(s)	199, 1106, 1199
Bpu10I	CCTNAGC	2 cut(s)	1145, 1191
Bpu14I	TTCGAA	2 cut(s)	665, 686
BpuEI	CTTGAG	3 cut(s)	1473, 1538, 1640
BpuMI	CCSGG	3 cut(s)	33, 463, 559
Bsa29I	ATCGAT	1 cut(s)	1422
BsaAI	YACGTR	1 cut(s)	1732
BsaHI	GRCGYC	2 cut(s)	195, 1202
BsaI	GGTCTC	1 cut(s)	403
BsaJI	CCNNGG	7 cut(s)	6, 462, 640, 912, 952, 1206, 1356
BsaWI	WCCGGW	4 cut(s)	230, 353, 850, 867
BsaXI	ACNNNNNCTCC	2 cut(s)	278, 308
Bsc4I	CCNNNNNNNGG	6 cut(s)	11, 31, 258, 808, 900, 959
Bse118I	RCCGGY	1 cut(s)	440
Bse1I	ACTGG	3 cut(s)	216, 1089, 1182
Bse3DI	GCAATG	3 cut(s)	85, 747, 1438
BseAI	TCCGGA	1 cut(s)	850
BseBI	CCWGG	5 cut(s)	8, 157, 954, 1041, 1358
BseCI	ATCGAT	1 cut(s)	1422
BseDI	CCNNGG	7 cut(s)	6, 462, 640, 912, 952, 1206, 1356
BseGI	GGATG	3 cut(s)	679, 1162, 1254
BseLI	CCNNNNNNNGG	6 cut(s)	11, 31, 258, 808, 900, 959
BseMI	GCAATG	3 cut(s)	85, 747, 1438
BseMII	CTCAG	4 cut(s)	81, 177, 1053, 1205
BseNI	ACTGG	3 cut(s)	216, 1089, 1182
BseRI	GAGGAG	3 cut(s)	304, 776, 947
BseSI	GKGCMC	1 cut(s)	1357
BseXI	GCAGC	4 cut(s)	847, 1172, 1409, 1522
BseYI	CCCAGC	4 cut(s)	252, 256, 536, 776
Bsh1236I	CGCG	2 cut(s)	367, 834
BshFI	GGCC	6 cut(s)	639, 801, 911, 1051, 1355, 1551
BshNI	GGYRCC	2 cut(s)	194, 356
BshVI	ATCGAT	1 cut(s)	1422
BsiHKAI	GWGCWC	2 cut(s)	120, 227
BslFI	GGGAC	1 cut(s)	1188
BslI	CCNNNNNNNGG	6 cut(s)	11, 31, 258, 808, 900, 959
BsmAI	GTCTC	4 cut(s)	145, 316, 403, 852
BsmBI	CGTCTC	1 cut(s)	145
BsmFI	GGGAC	1 cut(s)	1188
BsmI	GAATGC	3 cut(s)	1370, 1393, 1711
BsnI	GGCC	6 cut(s)	639, 801, 911, 1051, 1355, 1551
Bso31I	GGTCTC	1 cut(s)	403
Bsp119I	TTCGAA	2 cut(s)	665, 686
Bsp120I	GGGCCC	1 cut(s)	1353
Bsp1286I	GDGCHC	4 cut(s)	120, 227, 329, 1357
Bsp13I	TCCGGA	1 cut(s)	850
Bsp143I	GATC	8 cut(s)	121, 266, 350, 392, 417, 754, 829, 1498
BspANI	GGCC	6 cut(s)	639, 801, 911, 1051, 1355, 1551
BspCNI	CTCAG	4 cut(s)	80, 176, 1054, 1204
BspDI	ATCGAT	1 cut(s)	1422
BspEI	TCCGGA	1 cut(s)	850
BspFNI	CGCG	2 cut(s)	367, 834
BspLI	GGNNCC	5 cut(s)	196, 358, 720, 951, 1355
BspOI	GCTAGC	1 cut(s)	1010
BspPI	GGATC	3 cut(s)	261, 345, 749
BspQI	GCTCTTC	1 cut(s)	232
BspT104I	TTCGAA	2 cut(s)	665, 686
BspT107I	GGYRCC	2 cut(s)	194, 356
BspTNI	GGTCTC	1 cut(s)	403
BsrBI	CCGCTC	1 cut(s)	896
BsrDI	GCAATG	3 cut(s)	85, 747, 1438
BsrFI	RCCGGY	1 cut(s)	440
BsrI	ACTGG	3 cut(s)	216, 1089, 1182
BssAI	RCCGGY	1 cut(s)	440
BssECI	CCNNGG	7 cut(s)	6, 462, 640, 912, 952, 1206, 1356
BssMI	GATC	8 cut(s)	121, 266, 350, 392, 417, 754, 829, 1498
BssNI	GRCGYC	2 cut(s)	195, 1202
BssT1I	CCWWGG	1 cut(s)	1206
Bst2UI	CCWGG	5 cut(s)	8, 157, 954, 1041, 1358
Bst4CI	ACNGT	5 cut(s)	310, 529, 644, 1059, 1629
Bst6I	CTCTTC	1 cut(s)	232
BstACI	GRCGYC	2 cut(s)	195, 1202
BstAPI	GCANNNNNTGC	1 cut(s)	549
BstBAI	YACGTR	1 cut(s)	1732
BstBI	TTCGAA	2 cut(s)	665, 686
BstC8I	GCNNGC	8 cut(s)	13, 302, 595, 909, 1008, 1301, 1322, 1531
BstDEI	CTNAG	8 cut(s)	67, 163, 1062, 1145, 1191, 1272, 1608, 1688
BstDSI	CCRYGG	1 cut(s)	640
BstF5I	GGATG	3 cut(s)	679, 1162, 1254
BstFNI	CGCG	2 cut(s)	367, 834
BstH2I	RGCGCY	2 cut(s)	198, 348
BstHHI	GCGC	5 cut(s)	197, 347, 836, 970, 1535
BstKTI	GATC	8 cut(s)	124, 269, 353, 395, 420, 757, 832, 1501
BstMAI	GTCTC	4 cut(s)	145, 316, 403, 852
BstMBI	GATC	8 cut(s)	121, 266, 350, 392, 417, 754, 829, 1498
BstNI	CCWGG	5 cut(s)	8, 157, 954, 1041, 1358
BstNSI	RCATGY	2 cut(s)	1324, 1739
BstPAI	GACNNNNGTC	1 cut(s)	1180
BstSCI	CCNGG	8 cut(s)	6, 31, 155, 461, 557, 952, 1039, 1356
BstSFI	CTRYAG	1 cut(s)	1401
BstSLI	GKGCMC	1 cut(s)	1357
BstUI	CGCG	2 cut(s)	367, 834
BstV1I	GCAGC	4 cut(s)	847, 1172, 1409, 1522
BstV2I	GAAGAC	1 cut(s)	1644
BstX2I	RGATCY	1 cut(s)	266
BstXI	CCANNNNNNTGG	1 cut(s)	1171
BstYI	RGATCY	1 cut(s)	266
Bsu15I	ATCGAT	1 cut(s)	1422
BsuRI	GGCC	6 cut(s)	639, 801, 911, 1051, 1355, 1551
BsuTUI	ATCGAT	1 cut(s)	1422
BtgI	CCRYGG	1 cut(s)	640
BtsCI	GGATG	3 cut(s)	679, 1162, 1254
BtsIMutI	CAGTG	2 cut(s)	171, 1082
Cac8I	GCNNGC	8 cut(s)	13, 302, 595, 909, 1008, 1301, 1322, 1531
CfoI	GCGC	5 cut(s)	197, 347, 836, 970, 1535
Cfr10I	RCCGGY	1 cut(s)	440
Cfr13I	GGNCC	6 cut(s)	159, 407, 949, 1353, 1354, 1549
ClaI	ATCGAT	1 cut(s)	1422
CpoI	CGGWCCG	1 cut(s)	407
CseI	GACGC	1 cut(s)	1191
Csp6I	GTAC	2 cut(s)	357, 1340
CspCI	CAANNNNNGTGG	2 cut(s)	172, 207
CspI	CGGWCCG	1 cut(s)	407
CviAII	CATG	2 cut(s)	1321, 1736
CviQI	GTAC	2 cut(s)	357, 1340
DdeI	CTNAG	8 cut(s)	67, 163, 1062, 1145, 1191, 1272, 1608, 1688
DinI	GGCGCC	1 cut(s)	196
DpnI	GATC	8 cut(s)	123, 268, 352, 394, 419, 756, 831, 1500
DpnII	GATC	8 cut(s)	121, 266, 350, 392, 417, 754, 829, 1498
EaeI	YGGCCR	2 cut(s)	637, 909
Eam1104I	CTCTTC	1 cut(s)	232
EarI	CTCTTC	1 cut(s)	232
EciI	GGCGGA	1 cut(s)	391
Ecl136II	GAGCTC	2 cut(s)	118, 225
Eco130I	CCWWGG	1 cut(s)	1206
Eco24I	GRGCYC	4 cut(s)	120, 227, 329, 1357
Eco31I	GGTCTC	1 cut(s)	403
Eco47I	GGWCC	3 cut(s)	159, 407, 949
Eco53kI	GAGCTC	2 cut(s)	118, 225
Eco57I	CTGAAG	1 cut(s)	1545
EcoICRI	GAGCTC	2 cut(s)	118, 225
EcoO109I	RGGNCCY	3 cut(s)	159, 1353, 1549
EcoRII	CCWGG	5 cut(s)	6, 155, 952, 1039, 1356
EcoT14I	CCWWGG	1 cut(s)	1206
EcoT38I	GRGCYC	4 cut(s)	120, 227, 329, 1357
EgeI	GGCGCC	1 cut(s)	196
EheI	GGCGCC	1 cut(s)	196
ErhI	CCWWGG	1 cut(s)	1206
Esp3I	CGTCTC	1 cut(s)	145
FaeI	CATG	2 cut(s)	1324, 1739
FaqI	GGGAC	1 cut(s)	1188
FatI	CATG	2 cut(s)	1320, 1735
FblI	GTMKAC	1 cut(s)	280
FokI	GGATG	3 cut(s)	686, 1169, 1241
FriOI	GRGCYC	4 cut(s)	120, 227, 329, 1357
FspBI	CTAG	2 cut(s)	681, 1007
GlaI	GCGC	5 cut(s)	196, 346, 835, 969, 1534
GsaI	CCCAGC	4 cut(s)	256, 260, 540, 780
GsuI	CTGGAG	3 cut(s)	199, 1106, 1199
HaeII	RGCGCY	2 cut(s)	198, 348
HaeIII	GGCC	6 cut(s)	639, 801, 911, 1051, 1355, 1551
HgaI	GACGC	1 cut(s)	1191
HhaI	GCGC	5 cut(s)	197, 347, 836, 970, 1535
Hin1I	GRCGYC	2 cut(s)	195, 1202
Hin1II	CATG	2 cut(s)	1324, 1739
Hin6I	GCGC	5 cut(s)	195, 345, 834, 968, 1533
HinP1I	GCGC	5 cut(s)	195, 345, 834, 968, 1533
HincII	GTYRAC	1 cut(s)	178
HindII	GTYRAC	1 cut(s)	178
HindIII	AAGCTT	3 cut(s)	1121, 1332, 1610
HinfI	GANTC	7 cut(s)	41, 52, 65, 1151, 1181, 1250, 1660
HpaI	GTTAAC	1 cut(s)	178
HphI	GGTGA	4 cut(s)	126, 430, 778, 1139
Hpy166II	GTNNAC	4 cut(s)	169, 178, 281, 438
Hpy188III	TCNNGA	6 cut(s)	49, 576, 758, 851, 1512, 1657
Hpy8I	GTNNAC	4 cut(s)	169, 178, 281, 438
Hpy99I	CGWCG	1 cut(s)	275
HpyAV	CCTTC	9 cut(s)	564, 766, 1299, 1371, 1402, 1509, 1686, 1694, 1734
HpyCH4III	ACNGT	5 cut(s)	310, 529, 644, 1059, 1629
HpyCH4IV	ACGT	3 cut(s)	434, 453, 1731
HpyF3I	CTNAG	8 cut(s)	67, 163, 1062, 1145, 1191, 1272, 1608, 1688
HpySE526I	ACGT	3 cut(s)	434, 453, 1731
Hsp92I	GRCGYC	2 cut(s)	195, 1202
Hsp92II	CATG	2 cut(s)	1324, 1739
HspAI	GCGC	5 cut(s)	195, 345, 834, 968, 1533
KasI	GGCGCC	1 cut(s)	194
Kpn2I	TCCGGA	1 cut(s)	850
KpnI	GGTACC	1 cut(s)	360
KspAI	GTTAAC	1 cut(s)	178
Kzo9I	GATC	8 cut(s)	121, 266, 350, 392, 417, 754, 829, 1498
LguI	GCTCTTC	1 cut(s)	232
LmnI	GCTCC	5 cut(s)	51, 218, 382, 718, 1233
Lsp1109I	GCAGC	4 cut(s)	847, 1172, 1409, 1522
LweI	GCATC	7 cut(s)	394, 664, 979, 1102, 1102, 1147, 1234
MaeI	CTAG	2 cut(s)	681, 1007
MaeII	ACGT	3 cut(s)	434, 453, 1731
MaeIII	GTNAC	7 cut(s)	62, 70, 449, 872, 1080, 1441, 1493
MalI	GATC	8 cut(s)	123, 268, 352, 394, 419, 756, 831, 1500
MbiI	CCGCTC	1 cut(s)	896
MboI	GATC	8 cut(s)	121, 266, 350, 392, 417, 754, 829, 1498
MboII	GAAGA	9 cut(s)	219, 276, 504, 781, 986, 1147, 1253, 1284, 1649
MflI	RGATCY	1 cut(s)	266
MhlI	GDGCHC	4 cut(s)	120, 227, 329, 1357
MluCI	AATT	8 cut(s)	370, 505, 564, 579, 1282, 1310, 1570, 1716
Mly113I	GGCGCC	1 cut(s)	195
MlyI	GAGTC	4 cut(s)	35, 46, 59, 1190
MmeI	TCCRAC	2 cut(s)	294, 927
MroI	TCCGGA	1 cut(s)	850
MseI	TTAA	2 cut(s)	177, 732
MslI	CAYNNNNRTG	2 cut(s)	527, 1169
MspA1I	CMGCKG	3 cut(s)	256, 540, 1400
MspR9I	CCNGG	8 cut(s)	8, 33, 157, 463, 559, 954, 1041, 1358
Mva1269I	GAATGC	3 cut(s)	1370, 1393, 1711
MvaI	CCWGG	5 cut(s)	8, 157, 954, 1041, 1358
MvnI	CGCG	2 cut(s)	367, 834
NarI	GGCGCC	1 cut(s)	195
NciI	CCSGG	3 cut(s)	33, 463, 559
NdeII	GATC	8 cut(s)	121, 266, 350, 392, 417, 754, 829, 1498
NheI	GCTAGC	1 cut(s)	1006
NlaIII	CATG	2 cut(s)	1324, 1739
NlaIV	GGNNCC	5 cut(s)	196, 358, 720, 951, 1355
NmeAIII	GCCGAG	1 cut(s)	937
NmuCI	GTSAC	3 cut(s)	62, 70, 1080
NspI	RCATGY	2 cut(s)	1324, 1739
NspV	TTCGAA	2 cut(s)	665, 686
OliI	CACNNNNGTG	1 cut(s)	527
PaeI	GCATGC	1 cut(s)	1324
PciSI	GCTCTTC	1 cut(s)	232
PctI	GAATGC	3 cut(s)	1370, 1393, 1711
PfeI	GAWTC	3 cut(s)	1151, 1250, 1660
PflFI	GACNNNGTC	1 cut(s)	68
PfoI	TCCNGGA	2 cut(s)	557, 1039
PleI	GAGTC	4 cut(s)	35, 46, 59, 1189
PluTI	GGCGCC	1 cut(s)	198
PpsI	GAGTC	4 cut(s)	35, 46, 59, 1189
Ppu21I	YACGTR	1 cut(s)	1732
PpuMI	RGGWCCY	1 cut(s)	159
PshAI	GACNNNNGTC	1 cut(s)	1180
Psp124BI	GAGCTC	2 cut(s)	120, 227
Psp1406I	AACGTT	2 cut(s)	434, 453
Psp5II	RGGWCCY	1 cut(s)	159
Psp6I	CCWGG	5 cut(s)	6, 155, 952, 1039, 1356
PspFI	CCCAGC	4 cut(s)	252, 256, 536, 776
PspGI	CCWGG	5 cut(s)	6, 155, 952, 1039, 1356
PspN4I	GGNNCC	5 cut(s)	196, 358, 720, 951, 1355
PspOMI	GGGCCC	1 cut(s)	1353
PspPI	GGNCC	6 cut(s)	159, 407, 949, 1353, 1354, 1549
PspPPI	RGGWCCY	1 cut(s)	159
PsuI	RGATCY	1 cut(s)	266
PsyI	GACNNNGTC	1 cut(s)	68
PvuII	CAGCTG	2 cut(s)	256, 1400
RsaI	GTAC	2 cut(s)	358, 1341
RsaNI	GTAC	2 cut(s)	357, 1340
RseI	CAYNNNNRTG	2 cut(s)	527, 1169
Rsr2I	CGGWCCG	1 cut(s)	407
RsrII	CGGWCCG	1 cut(s)	407
SacI	GAGCTC	2 cut(s)	120, 227
SapI	GCTCTTC	1 cut(s)	232
SaqAI	TTAA	2 cut(s)	177, 732
Sau3AI	GATC	8 cut(s)	121, 266, 350, 392, 417, 754, 829, 1498
Sau96I	GGNCC	6 cut(s)	159, 407, 949, 1353, 1354, 1549
SchI	GAGTC	4 cut(s)	35, 46, 59, 1190
ScrFI	CCNGG	8 cut(s)	8, 33, 157, 463, 559, 954, 1041, 1358
SduI	GDGCHC	4 cut(s)	120, 227, 329, 1357
SfaNI	GCATC	7 cut(s)	394, 664, 979, 1102, 1102, 1147, 1234
SfcI	CTRYAG	1 cut(s)	1401
SfoI	GGCGCC	1 cut(s)	196
SfuI	TTCGAA	2 cut(s)	665, 686
SgrAI	CRCCGGYG	1 cut(s)	440
SinI	GGWCC	3 cut(s)	159, 407, 949
SmiMI	CAYNNNNRTG	2 cut(s)	527, 1169
SmlI	CTYRAG	3 cut(s)	1488, 1553, 1655
SmoI	CTYRAG	3 cut(s)	1488, 1553, 1655
SpeI	ACTAGT	1 cut(s)	680
SphI	GCATGC	1 cut(s)	1324
Sse9I	AATT	8 cut(s)	370, 505, 564, 579, 1282, 1310, 1570, 1716
SspDI	GGCGCC	1 cut(s)	194
SspI	AATATT	1 cut(s)	1459
SspMI	CTAG	2 cut(s)	681, 1007
SstI	GAGCTC	2 cut(s)	120, 227
StyD4I	CCNGG	8 cut(s)	6, 31, 155, 461, 557, 952, 1039, 1356
StyI	CCWWGG	1 cut(s)	1206
TaaI	ACNGT	5 cut(s)	310, 529, 644, 1059, 1629
TaiI	ACGT	3 cut(s)	437, 456, 1734
TaqI	TCGA	9 cut(s)	39, 120, 221, 655, 665, 686, 1239, 1422, 1703
TaqII	GACCGA	1 cut(s)	385
TasI	AATT	8 cut(s)	370, 505, 564, 579, 1282, 1310, 1570, 1716
TatI	WGTACW	1 cut(s)	1339
TauI	GCSGC	8 cut(s)	132, 200, 367, 543, 630, 884, 887, 907
TfiI	GAWTC	3 cut(s)	1151, 1250, 1660
Tru1I	TTAA	2 cut(s)	177, 732
Tru9I	TTAA	2 cut(s)	177, 732
TscAI	CASTG	2 cut(s)	171, 1089
TseFI	GTSAC	3 cut(s)	62, 70, 1080
TseI	GCWGC	4 cut(s)	860, 1160, 1397, 1535
Tsp45I	GTSAC	3 cut(s)	62, 70, 1080
TspDTI	ATGAA	2 cut(s)	498, 1716
TspGWI	ACGGA	1 cut(s)	50
TspRI	CASTG	2 cut(s)	171, 1089
Tth111I	GACNNNGTC	1 cut(s)	68
VpaK11BI	GGWCC	3 cut(s)	159, 407, 949
XceI	RCATGY	2 cut(s)	1324, 1739
XmiI	GTMKAC	1 cut(s)	280
XspI	CTAG	2 cut(s)	681, 1007

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.