Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr09

Orthogroup ID

OG0015114

Physical Location & Seq

Genomic Coordinates Forward (+)

34175298 .. 34176797

Gene Structure 1500 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD09G1267500.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1500 bp

ATGCTAATCAGACAAAGAACAAGGCCCCTCCTAATCCTAAATTTCTTCCGCCGGTTCACGACAACCGAATCGACTCAGCCCCAACTCGCCACCGCCGCCCCATCCCCGGTCGACCCGGCCCACCTCCTCCGGGTCTGCACCATTCTCTACCAGCAACAGAACTCGCCCGAGTCACGTCTCCACTCGAACCTCAACTCCTCCGCCTTCCAACTCACCCACGAGTTCTTCCTCCAGGTCTGCAACTCCTTCCCCCTTTCATGGCGGCCCGTCTACCTCTTCTTCCGCTACACTCAGTCCCACCACCCCCGTTTCACCCACACCGCCGTCTCCTTCAACAAAATGCTCGACGTCATCGGCAAGTCCAGGAACATCCAGCTCTTCTGGGACACCCTCCATGAGATGGGACGTCGTCGTTTGGTGAATCGCAAGACTTTTCTGATTGCTGTCAGGACGCTGGCCAAGGCCAGGGAGTTGAACAAGTGTGTAGATTTCTTTCACGCCATGAATGGGTTTGGATTCGGGTACGATTTGGGGAATTTGAATATGGTGGTTGAGGATTTGTGTGGGTCGAAGCTCGTCGTTGAGGCGAGATTTCTGGTTTTGAAGCTGAAGGAATCGATTCGGCCCGATGGGTTTACTTACAGGTGTTTGATTCAAGGTTTTTGCGATGTGGGTGATTTGATCGAGGCTTCAAAGATTTGGAATTTGATGGTGGAAGAAGGGTTCGACCCGGATATCGATGCCGTTGAGAAGATGATGGAGACCCTTTTCAAGACGAATCGATACGGCGAGGCGCTGAAGGTTTTCCAAATGATGAGGGTGAGCAGAATGGAGGATTTGGGTCTCTCAACTTACAGGCTTGTGATTGAGTGGATGTGTAAAAGGGGCAAGATTGAGGAAGCACATGAGGTGTTCGAGGAAATGCACAAGAGAAGGATTGAGGCAGATAATTTGACATTGGCGTCACTGGTTTACGGGCTTTTAGCAAGAGGACGAGTTACAATGGCGTTCAAGGCTGTGGAAGGGATCGAAAAGCCAGATATTAGCTTGTACCATGGGTTGATCAAGGGGCTTTTGAGGTTGAGAAAGGCGCGCGACGCGACGGAAGTGTTTAGGGAGATGATCAGAAGACGGTGTGAGCCTAACATGCACACTTATATCATGCTATTGCAAGGACATCTGGGGAAGAGGGGGAGGAAGGGATCGGATCCTCTGGTGAATTTCGACACCATTTTTGTTGGGGGTTTGGTGAAGGCAGGGAAGTCGTTGGAAGCCACCAAGTATGTGGAGAGGGTGATTAAAAGAGGACTCGAGGTCCCTAGATTTGATTACAACAAGTTTTTGCACTATTACTCAAATGAAGAAGGGGTGGAGATGTTTGAGGAGGTGGGGAAGAAGTTCAGGGAGGTCGGGTTGGTGGATTTGGCGGATATTTTTCAGAGGTACGGGGAGAAAATGGCGACGAGAGATGGAAGAAGAAATAGGGCAGGAGAGACGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003723 GO:0003824 GO:0004518 GO:0004519 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0006139 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009451 GO:0009987 GO:0016070 GO:0016787 GO:0016788 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044424 GO:0044464 GO:0046483 GO:0071704 GO:0090304 GO:0090305 GO:0097159 GO:1901360 GO:1901363

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

PPR PPR_1 PPR_2

Protein Analysis

500

Amino Acids

57.98

Weight (kDa)

9.42

Isoelectric Point (pI)

43.85

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PPR_1	PF12854	207 - 238	3.9e-06	PPR repeat
PPR_2	PF13041	209 - 246	3.6e-06	PPR repeat family
PPR	PF01535	283 - 313	9.4e-06	PPR repeat
PPR_2	PF13041	284 - 327	1.2e-09	PPR repeat family
PPR_3	PF13812	345 - 390	6.1e-06	Pentatricopeptide repeat domain
PPR_2	PF13041	346 - 392	8.8e-10	PPR repeat family

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

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Publication-ready

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Orthologous Genes (Group: OG0015114)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G26500
fragaria_vesca	FvH4_4g30220
malus_domestica	MD09G1267500.v1.1
prunus_persica	Prupe.1G285700_v2.0.a1
pyrus_communis	pycom09g18040
rosa_chinensis	RchiOBHm_Chr4g0438541
rosa_laevigata	RLG00000006353
rosa_multiflora	Rmu_sc0002327.1_g000006
rosa_roxburghii	Rroxscaffold_5G00379540
rosa_rugosa	Rorug04G0311200
rosa_samantha	Rh4AG361700 Rh4BG373000 Rh4CG387000 Rh4DG367700
rosa_wichuraiana	Rw0G006630 Rw0G016580

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	961
AatII	GACGTC	2 cut(s)	351, 409
AccB7I	CCANNNNNTGG	1 cut(s)	400
AccI	GTMKAC	2 cut(s)	111, 270
AccII	CGCG	3 cut(s)	1093, 1095, 1100
AciI	CCGC	8 cut(s)	49, 93, 96, 201, 262, 283, 321, 1427
AclWI	GGATC	4 cut(s)	1034, 1202, 1210, 1215
AcoI	YGGCCR	1 cut(s)	456
AcsI	RAATTY	4 cut(s)	40, 535, 703, 1219
AcuI	CTGAAG	2 cut(s)	629, 818
AcyI	GRCGYC	3 cut(s)	348, 406, 962
AfaI	GTAC	3 cut(s)	524, 1052, 1445
AfiI	CCNNNNNNNGG	6 cut(s)	106, 130, 258, 400, 465, 507
AgsI	TTSAA	8 cut(s)	334, 475, 541, 604, 656, 693, 772, 1012
AhdI	GACNNNNNGTC	1 cut(s)	1313
AjiI	CACGTC	2 cut(s)	176, 1497
AjnI	CCWGG	3 cut(s)	231, 362, 464
AloI	GAACNNNNNNTCC	4 cut(s)	179, 211, 707, 739
AluBI	AGCT	4 cut(s)	376, 574, 607, 1047
AluI	AGCT	4 cut(s)	376, 574, 607, 1047
Alw26I	GTCTC	5 cut(s)	182, 331, 755, 848, 1487
AlwI	GGATC	4 cut(s)	1034, 1202, 1210, 1215
Ama87I	CYCGRG	2 cut(s)	167, 1310
AoxI	GGCC	6 cut(s)	23, 117, 263, 456, 462, 623
ApoI	RAATTY	4 cut(s)	40, 535, 703, 1219
ArsI	GACNNNNNNTTYG	2 cut(s)	1217, 1249
Asp700I	GAANNNNTTC	3 cut(s)	618, 803, 1397
AspLEI	GCGC	3 cut(s)	796, 1093, 1095
AspS9I	GGNCC	5 cut(s)	24, 118, 264, 624, 1315
AsuC2I	CCSGG	4 cut(s)	107, 116, 131, 731
AsuHPI	GGTGA	8 cut(s)	205, 304, 430, 686, 832, 1228, 1261, 1306
AvaI	CYCGRG	2 cut(s)	167, 1310
AvaII	GGWCC	1 cut(s)	1315
BalI	TGGCCA	1 cut(s)	458
BamHI	GGATCC	1 cut(s)	1207
BauI	CACGAG	1 cut(s)	218
BbsI	GAAGAC	1 cut(s)	1135
BccI	CCATC	6 cut(s)	109, 394, 623, 703, 751, 1463
BceAI	ACGGC	3 cut(s)	308, 728, 802
BcgI	CGANNNNNNTGC	2 cut(s)	1245, 1279
BciT130I	CCWGG	3 cut(s)	233, 364, 466
BclI	TGATCA	2 cut(s)	1062, 1122
BcnI	CCSGG	4 cut(s)	107, 116, 131, 731
BcoDI	GTCTC	5 cut(s)	182, 331, 755, 848, 1487
BfaI	CTAG	1 cut(s)	1320
BfoI	RGCGCY	1 cut(s)	797
BisI	GCNGC	2 cut(s)	96, 263
BlsI	GCNGC	2 cut(s)	97, 264
Bme1390I	CCNGG	7 cut(s)	107, 116, 131, 233, 364, 466, 731
Bme18I	GGWCC	1 cut(s)	1315
BmeRI	GACNNNNNGTC	1 cut(s)	1313
BmeT110I	CYCGRG	2 cut(s)	167, 1310
BmgBI	CACGTC	2 cut(s)	176, 1497
BmgT120I	GGNCC	5 cut(s)	24, 118, 264, 624, 1315
BmiI	GGNNCC	3 cut(s)	26, 1209, 1317
BmrFI	CCNGG	7 cut(s)	107, 116, 131, 233, 364, 466, 731
BmsI	GCATC	1 cut(s)	730
BpiI	GAAGAC	1 cut(s)	1135
BpmI	CTGGAG	1 cut(s)	215
BpuMI	CCSGG	4 cut(s)	107, 116, 131, 731
Bsa29I	ATCGAT	3 cut(s)	617, 738, 781
BsaHI	GRCGYC	3 cut(s)	348, 406, 962
BsaI	GGTCTC	2 cut(s)	755, 848
BsaJI	CCNNGG	4 cut(s)	105, 459, 465, 1054
BsaXI	ACNNNNNCTCC	4 cut(s)	179, 209, 1397, 1427
Bsc4I	CCNNNNNNNGG	6 cut(s)	106, 130, 258, 400, 465, 507
Bse118I	RCCGGY	1 cut(s)	51
Bse1I	ACTGG	1 cut(s)	972
BseBI	CCWGG	3 cut(s)	233, 364, 466
BseCI	ATCGAT	3 cut(s)	617, 738, 781
BseDI	CCNNGG	4 cut(s)	105, 459, 465, 1054
BseGI	GGATG	3 cut(s)	101, 369, 879
BseLI	CCNNNNNNNGG	6 cut(s)	106, 130, 258, 400, 465, 507
BseMII	CTCAG	2 cut(s)	89, 305
BseNI	ACTGG	1 cut(s)	972
BsePI	GCGCGC	1 cut(s)	1091
BseRI	GAGGAG	3 cut(s)	116, 187, 1397
BsgI	GTGCAG	1 cut(s)	121
Bsh1236I	CGCG	3 cut(s)	1093, 1095, 1100
Bsh1285I	CGRYCG	1 cut(s)	111
BshFI	GGCC	6 cut(s)	25, 119, 265, 458, 464, 625
BshVI	ATCGAT	3 cut(s)	617, 738, 781
BsiEI	CGRYCG	1 cut(s)	111
BsiHKCI	CYCGRG	2 cut(s)	167, 1310
BsiSI	CCGG	5 cut(s)	52, 107, 116, 130, 731
BslFI	GGGAC	4 cut(s)	280, 398, 417, 1301
BslI	CCNNNNNNNGG	6 cut(s)	106, 130, 258, 400, 465, 507
BsmAI	GTCTC	5 cut(s)	182, 331, 755, 848, 1487
BsmBI	CGTCTC	3 cut(s)	182, 331, 1487
BsmFI	GGGAC	4 cut(s)	280, 398, 417, 1301
BsnI	GGCC	6 cut(s)	25, 119, 265, 458, 464, 625
Bso31I	GGTCTC	2 cut(s)	755, 848
BsoBI	CYCGRG	2 cut(s)	167, 1310
Bsp143I	GATC	6 cut(s)	681, 1026, 1062, 1122, 1202, 1207
Bsp19I	CCATGG	1 cut(s)	1054
BspACI	CCGC	8 cut(s)	49, 93, 96, 201, 262, 283, 321, 1427
BspANI	GGCC	6 cut(s)	25, 119, 265, 458, 464, 625
BspCNI	CTCAG	2 cut(s)	88, 304
BspDI	ATCGAT	3 cut(s)	617, 738, 781
BspFNI	CGCG	3 cut(s)	1093, 1095, 1100
BspLI	GGNNCC	3 cut(s)	26, 1209, 1317
BspPI	GGATC	4 cut(s)	1034, 1202, 1210, 1215
BspQI	GCTCTTC	1 cut(s)	383
BspTNI	GGTCTC	2 cut(s)	755, 848
BsrFI	RCCGGY	1 cut(s)	51
BsrI	ACTGG	1 cut(s)	972
BssAI	RCCGGY	1 cut(s)	51
BssECI	CCNNGG	4 cut(s)	105, 459, 465, 1054
BssHII	GCGCGC	1 cut(s)	1091
BssMI	GATC	6 cut(s)	681, 1026, 1062, 1122, 1202, 1207
BssNI	GRCGYC	3 cut(s)	348, 406, 962
BssSI	CACGAG	1 cut(s)	218
BssT1I	CCWWGG	2 cut(s)	459, 1054
Bst2BI	CACGAG	1 cut(s)	218
Bst2UI	CCWGG	3 cut(s)	233, 364, 466
Bst4CI	ACNGT	1 cut(s)	1134
Bst6I	CTCTTC	3 cut(s)	281, 383, 1181
BstACI	GRCGYC	3 cut(s)	348, 406, 962
BstC8I	GCNNGC	2 cut(s)	456, 1093
BstDEI	CTNAG	2 cut(s)	75, 291
BstDSI	CCRYGG	1 cut(s)	1054
BstF5I	GGATG	3 cut(s)	101, 369, 879
BstFNI	CGCG	3 cut(s)	1093, 1095, 1100
BstH2I	RGCGCY	1 cut(s)	797
BstHHI	GCGC	3 cut(s)	796, 1093, 1095
BstKTI	GATC	6 cut(s)	684, 1029, 1065, 1125, 1205, 1210
BstMAI	GTCTC	5 cut(s)	182, 331, 755, 848, 1487
BstMBI	GATC	6 cut(s)	681, 1026, 1062, 1122, 1202, 1207
BstMCI	CGRYCG	1 cut(s)	111
BstMWI	GCNNNNNNNGC	4 cut(s)	95, 1013, 1097, 1147
BstNI	CCWGG	3 cut(s)	233, 364, 466
BstNSI	RCATGY	1 cut(s)	1150
BstSCI	CCNGG	7 cut(s)	105, 114, 129, 231, 362, 464, 729
BstUI	CGCG	3 cut(s)	1093, 1095, 1100
BstV2I	GAAGAC	1 cut(s)	1135
BstX2I	RGATCY	1 cut(s)	1207
BstXI	CCANNNNNNTGG	1 cut(s)	1285
BstYI	RGATCY	1 cut(s)	1207
Bsu15I	ATCGAT	3 cut(s)	617, 738, 781
BsuRI	GGCC	6 cut(s)	25, 119, 265, 458, 464, 625
BsuTUI	ATCGAT	3 cut(s)	617, 738, 781
BtgI	CCRYGG	1 cut(s)	1054
BtgZI	GCGATG	1 cut(s)	681
BtrI	CACGTC	2 cut(s)	176, 1497
BtsCI	GGATG	3 cut(s)	101, 369, 879
BtsIMutI	CAGTG	1 cut(s)	965
Cac8I	GCNNGC	2 cut(s)	456, 1093
CfoI	GCGC	3 cut(s)	796, 1093, 1095
Cfr10I	RCCGGY	1 cut(s)	51
Cfr13I	GGNCC	5 cut(s)	24, 118, 264, 624, 1315
ClaI	ATCGAT	3 cut(s)	617, 738, 781
CseI	GACGC	3 cut(s)	460, 951, 1106
Csp6I	GTAC	3 cut(s)	523, 1051, 1444
CviAII	CATG	7 cut(s)	258, 395, 502, 905, 1055, 1147, 1162
CviQI	GTAC	3 cut(s)	523, 1051, 1444
DdeI	CTNAG	2 cut(s)	75, 291
DpnI	GATC	6 cut(s)	683, 1028, 1064, 1124, 1204, 1209
DpnII	GATC	6 cut(s)	681, 1026, 1062, 1122, 1202, 1207
DrdI	GACNNNNNNGTC	1 cut(s)	961
DriI	GACNNNNNGTC	1 cut(s)	1313
DseDI	GACNNNNNNGTC	1 cut(s)	961
EaeI	YGGCCR	1 cut(s)	456
Eam1104I	CTCTTC	3 cut(s)	281, 383, 1181
Eam1105I	GACNNNNNGTC	1 cut(s)	1313
EarI	CTCTTC	3 cut(s)	281, 383, 1181
EciI	GGCGGA	3 cut(s)	38, 190, 1442
Eco130I	CCWWGG	2 cut(s)	459, 1054
Eco31I	GGTCTC	2 cut(s)	755, 848
Eco32I	GATATC	1 cut(s)	736
Eco47I	GGWCC	1 cut(s)	1315
Eco57I	CTGAAG	2 cut(s)	629, 818
Eco88I	CYCGRG	2 cut(s)	167, 1310
EcoO109I	RGGNCCY	2 cut(s)	24, 1315
EcoRII	CCWGG	3 cut(s)	231, 362, 464
EcoRV	GATATC	1 cut(s)	736
EcoT14I	CCWWGG	2 cut(s)	459, 1054
ErhI	CCWWGG	2 cut(s)	459, 1054
Esp3I	CGTCTC	3 cut(s)	182, 331, 1487
FaeI	CATG	7 cut(s)	261, 398, 505, 908, 1058, 1150, 1165
FaqI	GGGAC	4 cut(s)	280, 398, 417, 1301
FatI	CATG	7 cut(s)	257, 394, 501, 904, 1054, 1146, 1161
FbaI	TGATCA	2 cut(s)	1062, 1122
FblI	GTMKAC	2 cut(s)	111, 270
Fnu4HI	GCNGC	2 cut(s)	96, 263
FokI	GGATG	3 cut(s)	88, 356, 886
Fsp4HI	GCNGC	2 cut(s)	96, 263
FspBI	CTAG	1 cut(s)	1320
GlaI	GCGC	3 cut(s)	795, 1092, 1094
GluI	GCNGC	2 cut(s)	96, 263
GsuI	CTGGAG	1 cut(s)	215
HaeII	RGCGCY	1 cut(s)	797
HaeIII	GGCC	6 cut(s)	25, 119, 265, 458, 464, 625
HapII	CCGG	5 cut(s)	52, 107, 116, 130, 731
HgaI	GACGC	3 cut(s)	460, 951, 1106
HhaI	GCGC	3 cut(s)	796, 1093, 1095
Hin1I	GRCGYC	3 cut(s)	348, 406, 962
Hin1II	CATG	7 cut(s)	261, 398, 505, 908, 1058, 1150, 1165
Hin6I	GCGC	3 cut(s)	794, 1091, 1093
HinP1I	GCGC	3 cut(s)	794, 1091, 1093
HincII	GTYRAC	1 cut(s)	112
HindII	GTYRAC	1 cut(s)	112
HpaII	CCGG	5 cut(s)	52, 107, 116, 130, 731
HphI	GGTGA	8 cut(s)	205, 304, 430, 686, 832, 1228, 1261, 1306
Hpy166II	GTNNAC	5 cut(s)	57, 112, 271, 636, 973
Hpy188I	TCNGA	5 cut(s)	11, 438, 1127, 1207, 1440
Hpy188III	TCNNGA	3 cut(s)	58, 448, 772
Hpy8I	GTNNAC	5 cut(s)	57, 112, 271, 636, 973
Hpy99I	CGWCG	7 cut(s)	350, 411, 414, 581, 1100, 1105, 1465
HpyCH4III	ACNGT	1 cut(s)	1134
HpyCH4IV	ACGT	4 cut(s)	175, 348, 406, 1496
HpyCH4V	TGCA	6 cut(s)	138, 240, 925, 1150, 1171, 1345
HpyF10VI	GCNNNNNNNGC	4 cut(s)	95, 1013, 1097, 1147
HpyF3I	CTNAG	2 cut(s)	75, 291
HpySE526I	ACGT	4 cut(s)	175, 348, 406, 1496
Hsp92I	GRCGYC	3 cut(s)	348, 406, 962
Hsp92II	CATG	7 cut(s)	261, 398, 505, 908, 1058, 1150, 1165
HspAI	GCGC	3 cut(s)	794, 1091, 1093
Ksp22I	TGATCA	2 cut(s)	1062, 1122
Kzo9I	GATC	6 cut(s)	681, 1026, 1062, 1122, 1202, 1207
LguI	GCTCTTC	1 cut(s)	383
LweI	GCATC	1 cut(s)	730
MaeI	CTAG	1 cut(s)	1320
MaeII	ACGT	4 cut(s)	175, 348, 406, 1496
MaeIII	GTNAC	3 cut(s)	171, 963, 997
MalI	GATC	6 cut(s)	683, 1028, 1064, 1124, 1204, 1209
MboI	GATC	6 cut(s)	681, 1026, 1062, 1122, 1202, 1207
MflI	RGATCY	1 cut(s)	1207
MlsI	TGGCCA	1 cut(s)	458
MluCI	AATT	5 cut(s)	40, 535, 703, 949, 1219
MluNI	TGGCCA	1 cut(s)	458
MlyI	GAGTC	3 cut(s)	67, 179, 1302
MmeI	TCCRAC	2 cut(s)	232, 1248
Mox20I	TGGCCA	1 cut(s)	458
MroXI	GAANNNNTTC	3 cut(s)	618, 803, 1397
MscI	TGGCCA	1 cut(s)	458
MseI	TTAA	1 cut(s)	1299
Msp20I	TGGCCA	1 cut(s)	458
MspI	CCGG	5 cut(s)	52, 107, 116, 130, 731
MspR9I	CCNGG	7 cut(s)	107, 116, 131, 233, 364, 466, 731
MvaI	CCWGG	3 cut(s)	233, 364, 466
MvnI	CGCG	3 cut(s)	1093, 1095, 1100
MwoI	GCNNNNNNNGC	4 cut(s)	95, 1013, 1097, 1147
NciI	CCSGG	4 cut(s)	107, 116, 131, 731
NcoI	CCATGG	1 cut(s)	1054
NdeII	GATC	6 cut(s)	681, 1026, 1062, 1122, 1202, 1207
NlaIII	CATG	7 cut(s)	261, 398, 505, 908, 1058, 1150, 1165
NlaIV	GGNNCC	3 cut(s)	26, 1209, 1317
NmuCI	GTSAC	2 cut(s)	171, 963
NspI	RCATGY	1 cut(s)	1150
PaeR7I	CTCGAG	1 cut(s)	1310
PauI	GCGCGC	1 cut(s)	1091
PciSI	GCTCTTC	1 cut(s)	383
PdmI	GAANNNNTTC	3 cut(s)	618, 803, 1397
PfeI	GAWTC	7 cut(s)	68, 421, 516, 614, 619, 652, 778
PflFI	GACNNNGTC	1 cut(s)	408
PflMI	CCANNNNNTGG	1 cut(s)	400
PfoI	TCCNGGA	1 cut(s)	362
PkrI	GCNGC	2 cut(s)	97, 264
PleI	GAGTC	3 cut(s)	67, 178, 1302
PpsI	GAGTC	3 cut(s)	67, 178, 1302
PpuMI	RGGWCCY	1 cut(s)	1315
Psp5II	RGGWCCY	1 cut(s)	1315
Psp6I	CCWGG	3 cut(s)	231, 362, 464
PspGI	CCWGG	3 cut(s)	231, 362, 464
PspN4I	GGNNCC	3 cut(s)	26, 1209, 1317
PspPI	GGNCC	5 cut(s)	24, 118, 264, 624, 1315
PspPPI	RGGWCCY	1 cut(s)	1315
PspXI	VCTCGAGB	1 cut(s)	1310
PsuI	RGATCY	1 cut(s)	1207
PsyI	GACNNNGTC	1 cut(s)	408
PteI	GCGCGC	1 cut(s)	1091
RsaI	GTAC	3 cut(s)	524, 1052, 1445
RsaNI	GTAC	3 cut(s)	523, 1051, 1444
SalI	GTCGAC	1 cut(s)	110
SapI	GCTCTTC	1 cut(s)	383
SaqAI	TTAA	1 cut(s)	1299
SatI	GCNGC	2 cut(s)	96, 263
Sau3AI	GATC	6 cut(s)	681, 1026, 1062, 1122, 1202, 1207
Sau96I	GGNCC	5 cut(s)	24, 118, 264, 624, 1315
SchI	GAGTC	3 cut(s)	67, 179, 1302
ScrFI	CCNGG	7 cut(s)	107, 116, 131, 233, 364, 466, 731
SfaNI	GCATC	1 cut(s)	730
Sfr274I	CTCGAG	1 cut(s)	1310
SinI	GGWCC	1 cut(s)	1315
SlaI	CTCGAG	1 cut(s)	1310
SmlI	CTYRAG	1 cut(s)	1310
SmoI	CTYRAG	1 cut(s)	1310
Sse9I	AATT	5 cut(s)	40, 535, 703, 949, 1219
SsiI	CCGC	8 cut(s)	49, 93, 96, 201, 262, 283, 321, 1427
SspMI	CTAG	1 cut(s)	1320
StyD4I	CCNGG	7 cut(s)	105, 114, 129, 231, 362, 464, 729
StyI	CCWWGG	2 cut(s)	459, 1054
TaaI	ACNGT	1 cut(s)	1134
TaiI	ACGT	4 cut(s)	178, 351, 409, 1499
TasI	AATT	5 cut(s)	40, 535, 703, 949, 1219
TauI	GCSGC	2 cut(s)	98, 265
TfiI	GAWTC	7 cut(s)	68, 421, 516, 614, 619, 652, 778
Tru1I	TTAA	1 cut(s)	1299
Tru9I	TTAA	1 cut(s)	1299
TscAI	CASTG	1 cut(s)	972
TseFI	GTSAC	2 cut(s)	171, 963
Tsp45I	GTSAC	2 cut(s)	171, 963
TspDTI	ATGAA	3 cut(s)	246, 518, 1374
TspGWI	ACGGA	1 cut(s)	1118
TspRI	CASTG	1 cut(s)	972
Tth111I	GACNNNGTC	1 cut(s)	408
Van91I	CCANNNNNTGG	1 cut(s)	400
VpaK11BI	GGWCC	1 cut(s)	1315
XapI	RAATTY	4 cut(s)	40, 535, 703, 1219
XceI	RCATGY	1 cut(s)	1150
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1282
XhoI	CTCGAG	1 cut(s)	1310
XmiI	GTMKAC	2 cut(s)	111, 270
XmnI	GAANNNNTTC	3 cut(s)	618, 803, 1397
XspI	CTAG	1 cut(s)	1320
ZraI	GACGTC	2 cut(s)	349, 407

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.