Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr4B

Orthogroup ID

OG0015114

Physical Location & Seq

Genomic Coordinates Forward (+)

52975394 .. 52986893

Gene Structure 11500 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh4BG373000.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1506 bp

ATGATACTCGGACAAAGAAGGAGCCTCACAAAACCCCTGCAAAACCTCGTCCGCTTCCTCACAACCGAGTCAACCCACCCCAACCCGCCATCCCCAGTGAACCAGGCCCACCTCCTCCGCGTCTGCACCATCCTCTACCAGCAGCAGCAGCAGAACTCGCCCGAGTCACGTCTCCACTCCAATCTCAACTCCCTCAGCTTCAATCTCACCCACGAGTTCTTCCTCCAGGTCTGCAACAACTTCCCACTCTCATGGCGACCCGTCTATCTCTTCTACCAGTACACCCAGACCAATCCCAGTTTCACCCACACCGCCGTATCACTGAACAAAATGGTCGACGTCGTCGGAAAGTCCCGGAACATGGAGCTGTTCTGGGACTTGGTTAATGAGATGGGACGGCGCCGTTTGGTGAATGACAGGACTTTTGTTATTGGGTTGAGGACTCTGGCCAAGGCCAGAGAGTTGAACAAGTGTGTGGAGTTTTTTCATGTGATGAGTGGGTGTGGGATTGAGTGTAATGTGGAGACTTTGAACAAGGTGATCAAGAGTCTTTGTGGGTTGAAACTTGTTGAAGAGGCCAAGTTTGTGGTGTTTAAGTTGAAGGAGAGGATTAGGCCTGATGGGGTTACTTTTAAGTGTTTGATTCAAGGGTTTTGTGATGTGGGGGATTTGGTTGAGGCTTCCAAGATTTGGAATTTGATGGTGGATCAAGGGTTTGATCCTTGCGTTGGTGTTGTTGACAAGATGATGGAGACTCTTTTCAAGACGAATCGGGATGCTGAGGCGATGAAGCTGTTCCAGATGATGAGGTTGAAGAGGATGGAGGAGTTGGGGCTTTCGAGTTATAGGCTTGTGATTGAGTGGATGTGTAAGAAGGGGAAGGTGGAGAATGCACATGTGGTTTATGATGAAATGCGCAAGAGAGGGATCAAAGCAGATAACTTGACATGGGGGTCGCTGGTTTATGGTCTTTTGTCGAGAAGGAGAGTAAATGAAGCTTATGGGATTGTGGAAGGGATTGAGAAGCCGGATATCAGTGTGTACCATGGCTTGATGAAGGGGCTGTTGAGGTTAAAAAGGCCGGGGGAAGCGACACAAGTGTTTAGGGAGATGATCAAGAGGGGGTGTGAGCCTAACATGCACACATATGTCATGTTATTGCAAGGGCATTTGGGAAAGAGAGGGAGGAAGGGAAAGGATCCGCTTGTGAATTTCGACACCATTTTTGTTGGGGGTTTGGTTAAGGCAGGGAAGTCATTGGAAGCCACCAAGTATGTGGAGAGAGCGACTAAAAGAGGGCTTGAGGTGCCTAGATTCGATTATAACAAGTTTTTGCATTACTACTCGAACGAGGAAGGGGTGGCAATGTTTGAGGAGGTGGGGAAGAAATTAAGGAAGGCCGGAATGGTTGATTTGGCGGATATTTTCCAGAGATATGGGGAGAAAATGGCCACGAGAGATAGAAGAAGAGATAGAGCTGTCGAGCCATTAGTAGAGCGTTCATAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003723 GO:0003824 GO:0004518 GO:0004519 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0006139 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009451 GO:0009987 GO:0016070 GO:0016787 GO:0016788 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044424 GO:0044464 GO:0046483 GO:0071704 GO:0090304 GO:0090305 GO:0097159 GO:1901360 GO:1901363

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

PPR PPR_1 PPR_2

Protein Analysis

501

Amino Acids

57.83

Weight (kDa)

9.53

Isoelectric Point (pI)

39.94

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PPR_1	PF12854	204 - 235	1.5e-06	PPR repeat
PPR_2	PF13041	281 - 324	4.3e-10	PPR repeat family
PPR_2	PF13041	343 - 390	2.7e-11	PPR repeat family

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0015114)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G26500
fragaria_vesca	FvH4_4g30220
malus_domestica	MD09G1267500.v1.1
prunus_persica	Prupe.1G285700_v2.0.a1
pyrus_communis	pycom09g18040
rosa_chinensis	RchiOBHm_Chr4g0438541
rosa_laevigata	RLG00000006353
rosa_multiflora	Rmu_sc0002327.1_g000006
rosa_roxburghii	Rroxscaffold_5G00379540
rosa_rugosa	Rorug04G0311200
rosa_samantha	Rh4AG361700 Rh4BG373000 Rh4CG387000 Rh4DG367700
rosa_wichuraiana	Rw0G006630 Rw0G016580

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1323
AasI	GACNNNNNNGTC	1 cut(s)	952
AatII	GACGTC	1 cut(s)	342
Acc16I	TGCGCA	1 cut(s)	917
AccB1I	GGYRCC	2 cut(s)	399, 1306
AccB7I	CCANNNNNTGG	1 cut(s)	690
AccI	GTMKAC	1 cut(s)	336
AccII	CGCG	1 cut(s)	120
AciI	CCGC	6 cut(s)	52, 86, 118, 312, 1202, 1418
AclWI	GGATC	5 cut(s)	713, 714, 935, 1193, 1206
AcoI	YGGCCR	2 cut(s)	447, 1449
AcsI	RAATTY	2 cut(s)	694, 1210
AcyI	GRCGYC	2 cut(s)	339, 400
AfaI	GTAC	2 cut(s)	281, 1043
AfiI	CCNNNNNNNGG	3 cut(s)	361, 690, 728
AflIII	ACRYGT	1 cut(s)	895
AgsI	TTSAA	9 cut(s)	202, 466, 532, 562, 572, 601, 647, 763, 814
AjiI	CACGTC	1 cut(s)	170
AjnI	CCWGG	2 cut(s)	102, 225
AjuI	GAANNNNNNNTTGG	2 cut(s)	284, 316
AluBI	AGCT	5 cut(s)	198, 367, 793, 998, 1478
AluI	AGCT	5 cut(s)	198, 367, 793, 998, 1478
Alw26I	GTCTC	3 cut(s)	176, 518, 746
AlwI	GGATC	5 cut(s)	713, 714, 935, 1193, 1206
Ama87I	CYCGRG	1 cut(s)	161
AoxI	GGCC	8 cut(s)	105, 447, 453, 576, 614, 1079, 1398, 1449
ApeKI	GCWGC	3 cut(s)	142, 145, 148
ApoI	RAATTY	2 cut(s)	694, 1210
ArsI	GACNNNNNNTTYG	4 cut(s)	407, 439, 1208, 1240
Asp700I	GAANNNNTTC	1 cut(s)	794
AspLEI	GCGC	2 cut(s)	402, 918
AspS9I	GGNCC	1 cut(s)	106
AsuC2I	CCSGG	2 cut(s)	355, 1083
AsuHPI	GGTGA	4 cut(s)	199, 295, 421, 550
AvaI	CYCGRG	1 cut(s)	161
BaeI	ACNNNNGTAYC	2 cut(s)	300, 333
BalI	TGGCCA	2 cut(s)	449, 1451
BamHI	GGATCC	1 cut(s)	1198
BanI	GGYRCC	2 cut(s)	399, 1306
BauI	CACGAG	2 cut(s)	212, 1453
BbvCI	CCTCAGC	2 cut(s)	194, 780
BbvI	GCAGC	3 cut(s)	154, 157, 160
BccI	CCATC	7 cut(s)	97, 137, 385, 614, 694, 742, 814
BceAI	ACGGC	3 cut(s)	299, 387, 413
BciT130I	CCWGG	2 cut(s)	104, 227
BclI	TGATCA	2 cut(s)	540, 1113
BcnI	CCSGG	2 cut(s)	355, 1083
BcoDI	GTCTC	3 cut(s)	176, 518, 746
BfaI	CTAG	1 cut(s)	1311
BfoI	RGCGCY	1 cut(s)	403
BisI	GCNGC	3 cut(s)	143, 146, 149
BlsI	GCNGC	3 cut(s)	144, 147, 150
Bme1390I	CCNGG	4 cut(s)	104, 227, 355, 1083
BmeT110I	CYCGRG	1 cut(s)	161
BmgBI	CACGTC	1 cut(s)	170
BmgT120I	GGNCC	1 cut(s)	106
BmiI	GGNNCC	4 cut(s)	23, 401, 1200, 1308
BmrFI	CCNGG	4 cut(s)	104, 227, 355, 1083
BmrI	ACTGGG	2 cut(s)	89, 291
BmsI	GCATC	1 cut(s)	766
BmuI	ACTGGG	2 cut(s)	89, 291
BpmI	CTGGAG	1 cut(s)	209
Bpu10I	CCTNAGC	2 cut(s)	194, 780
BpuEI	CTTGAG	1 cut(s)	1322
BpuMI	CCSGG	2 cut(s)	355, 1083
BsaHI	GRCGYC	2 cut(s)	339, 400
BsaJI	CCNNGG	3 cut(s)	450, 1045, 1082
Bsc4I	CCNNNNNNNGG	3 cut(s)	361, 690, 728
Bse1I	ACTGG	3 cut(s)	95, 277, 297
Bse3DI	GCAATG	1 cut(s)	1371
BseBI	CCWGG	2 cut(s)	104, 227
BseDI	CCNNGG	3 cut(s)	450, 1045, 1082
BseGI	GGATG	5 cut(s)	89, 129, 781, 825, 870
BseLI	CCNNNNNNNGG	3 cut(s)	361, 690, 728
BseMI	GCAATG	1 cut(s)	1371
BseMII	CTCAG	2 cut(s)	208, 771
BseNI	ACTGG	3 cut(s)	95, 277, 297
BseRI	GAGGAG	3 cut(s)	104, 839, 1388
BseXI	GCAGC	3 cut(s)	154, 157, 160
BsgI	GTGCAG	1 cut(s)	109
Bsh1236I	CGCG	1 cut(s)	120
BshFI	GGCC	8 cut(s)	107, 449, 455, 578, 616, 1081, 1400, 1451
BshNI	GGYRCC	2 cut(s)	399, 1306
BsiHKCI	CYCGRG	1 cut(s)	161
BsiSI	CCGG	4 cut(s)	355, 1028, 1082, 1401
BslFI	GGGAC	3 cut(s)	337, 389, 408
BslI	CCNNNNNNNGG	3 cut(s)	361, 690, 728
BsmAI	GTCTC	3 cut(s)	176, 518, 746
BsmBI	CGTCTC	1 cut(s)	176
BsmFI	GGGAC	3 cut(s)	337, 389, 408
BsmI	GAATGC	1 cut(s)	895
BsnI	GGCC	8 cut(s)	107, 449, 455, 578, 616, 1081, 1400, 1451
BsoBI	CYCGRG	1 cut(s)	161
Bsp143I	GATC	6 cut(s)	540, 706, 718, 927, 1113, 1198
Bsp19I	CCATGG	1 cut(s)	1045
BspACI	CCGC	6 cut(s)	52, 86, 118, 312, 1202, 1418
BspANI	GGCC	8 cut(s)	107, 449, 455, 578, 616, 1081, 1400, 1451
BspCNI	CTCAG	2 cut(s)	207, 772
BspFNI	CGCG	1 cut(s)	120
BspLI	GGNNCC	4 cut(s)	23, 401, 1200, 1308
BspPI	GGATC	5 cut(s)	713, 714, 935, 1193, 1206
BspT107I	GGYRCC	2 cut(s)	399, 1306
BsrDI	GCAATG	1 cut(s)	1371
BsrI	ACTGG	3 cut(s)	95, 277, 297
BssECI	CCNNGG	3 cut(s)	450, 1045, 1082
BssMI	GATC	6 cut(s)	540, 706, 718, 927, 1113, 1198
BssNI	GRCGYC	2 cut(s)	339, 400
BssSI	CACGAG	2 cut(s)	212, 1453
BssT1I	CCWWGG	2 cut(s)	450, 1045
Bst2BI	CACGAG	2 cut(s)	212, 1453
Bst2UI	CCWGG	2 cut(s)	104, 227
Bst6I	CTCTTC	4 cut(s)	275, 567, 809, 1462
BstACI	GRCGYC	2 cut(s)	339, 400
BstDEI	CTNAG	2 cut(s)	194, 780
BstDSI	CCRYGG	1 cut(s)	1045
BstF5I	GGATG	5 cut(s)	89, 129, 781, 825, 870
BstFNI	CGCG	1 cut(s)	120
BstH2I	RGCGCY	1 cut(s)	403
BstHHI	GCGC	2 cut(s)	402, 918
BstKTI	GATC	6 cut(s)	543, 709, 721, 930, 1116, 1201
BstMAI	GTCTC	3 cut(s)	176, 518, 746
BstMBI	GATC	6 cut(s)	540, 706, 718, 927, 1113, 1198
BstMWI	GCNNNNNNNGC	4 cut(s)	148, 157, 1138, 1306
BstNI	CCWGG	2 cut(s)	104, 227
BstNSI	RCATGY	2 cut(s)	899, 1141
BstSCI	CCNGG	4 cut(s)	102, 225, 353, 1081
BstUI	CGCG	1 cut(s)	120
BstV1I	GCAGC	3 cut(s)	154, 157, 160
BstX2I	RGATCY	1 cut(s)	1198
BstXI	CCANNNNNNTGG	4 cut(s)	252, 586, 1276, 1436
BstYI	RGATCY	1 cut(s)	1198
BsuRI	GGCC	8 cut(s)	107, 449, 455, 578, 616, 1081, 1400, 1451
BtgI	CCRYGG	1 cut(s)	1045
BtgZI	GCGATG	1 cut(s)	800
BtrI	CACGTC	1 cut(s)	170
BtsCI	GGATG	5 cut(s)	89, 129, 781, 825, 870
BtsIMutI	CAGTG	3 cut(s)	102, 320, 1042
CfoI	GCGC	2 cut(s)	402, 918
Cfr13I	GGNCC	1 cut(s)	106
CseI	GACGC	1 cut(s)	109
Csp6I	GTAC	2 cut(s)	280, 1042
CviAII	CATG	8 cut(s)	252, 361, 488, 896, 948, 1046, 1138, 1153
CviQI	GTAC	2 cut(s)	280, 1042
DdeI	CTNAG	2 cut(s)	194, 780
DinI	GGCGCC	1 cut(s)	401
DpnI	GATC	6 cut(s)	542, 708, 720, 929, 1115, 1200
DpnII	GATC	6 cut(s)	540, 706, 718, 927, 1113, 1198
DrdI	GACNNNNNNGTC	1 cut(s)	952
DseDI	GACNNNNNNGTC	1 cut(s)	952
EaeI	YGGCCR	2 cut(s)	447, 1449
Eam1104I	CTCTTC	4 cut(s)	275, 567, 809, 1462
EarI	CTCTTC	4 cut(s)	275, 567, 809, 1462
EciI	GGCGGA	1 cut(s)	1433
Eco130I	CCWWGG	2 cut(s)	450, 1045
Eco147I	AGGCCT	1 cut(s)	616
Eco32I	GATATC	1 cut(s)	1033
Eco88I	CYCGRG	1 cut(s)	161
EcoRII	CCWGG	2 cut(s)	102, 225
EcoRV	GATATC	1 cut(s)	1033
EcoT14I	CCWWGG	2 cut(s)	450, 1045
EgeI	GGCGCC	1 cut(s)	401
EheI	GGCGCC	1 cut(s)	401
ErhI	CCWWGG	2 cut(s)	450, 1045
Esp3I	CGTCTC	1 cut(s)	176
FaeI	CATG	8 cut(s)	255, 364, 491, 899, 951, 1049, 1141, 1156
FaqI	GGGAC	3 cut(s)	337, 389, 408
FatI	CATG	8 cut(s)	251, 360, 487, 895, 947, 1045, 1137, 1152
FauI	CCCGC	1 cut(s)	93
FauNDI	CATATG	1 cut(s)	1147
FbaI	TGATCA	2 cut(s)	540, 1113
FblI	GTMKAC	1 cut(s)	336
Fnu4HI	GCNGC	3 cut(s)	143, 146, 149
FokI	GGATG	5 cut(s)	76, 116, 788, 832, 877
Fsp4HI	GCNGC	3 cut(s)	143, 146, 149
FspBI	CTAG	1 cut(s)	1311
FspI	TGCGCA	1 cut(s)	917
GlaI	GCGC	2 cut(s)	401, 917
GluI	GCNGC	3 cut(s)	143, 146, 149
GsuI	CTGGAG	1 cut(s)	209
HaeII	RGCGCY	1 cut(s)	403
HaeIII	GGCC	8 cut(s)	107, 449, 455, 578, 616, 1081, 1400, 1451
HapII	CCGG	4 cut(s)	355, 1028, 1082, 1401
HgaI	GACGC	1 cut(s)	109
HhaI	GCGC	2 cut(s)	402, 918
Hin1I	GRCGYC	2 cut(s)	339, 400
Hin1II	CATG	8 cut(s)	255, 364, 491, 899, 951, 1049, 1141, 1156
Hin6I	GCGC	2 cut(s)	400, 916
HinP1I	GCGC	2 cut(s)	400, 916
HincII	GTYRAC	3 cut(s)	72, 337, 739
HindII	GTYRAC	3 cut(s)	72, 337, 739
HindIII	AAGCTT	1 cut(s)	996
HinfI	GANTC	8 cut(s)	68, 164, 442, 547, 643, 754, 769, 1314
HpaII	CCGG	4 cut(s)	355, 1028, 1082, 1401
HphI	GGTGA	4 cut(s)	199, 295, 421, 550
Hpy166II	GTNNAC	6 cut(s)	72, 100, 282, 337, 739, 1042
Hpy188I	TCNGA	2 cut(s)	11, 347
Hpy188III	TCNNGA	7 cut(s)	544, 763, 773, 799, 978, 1117, 1429
Hpy8I	GTNNAC	6 cut(s)	72, 100, 282, 337, 739, 1042
Hpy99I	CGWCG	3 cut(s)	341, 344, 347
HpyCH4IV	ACGT	2 cut(s)	169, 339
HpyCH4V	TGCA	7 cut(s)	40, 126, 234, 893, 1141, 1162, 1336
HpyF10VI	GCNNNNNNNGC	4 cut(s)	148, 157, 1138, 1306
HpyF3I	CTNAG	2 cut(s)	194, 780
HpySE526I	ACGT	2 cut(s)	169, 339
Hsp92I	GRCGYC	2 cut(s)	339, 400
Hsp92II	CATG	8 cut(s)	255, 364, 491, 899, 951, 1049, 1141, 1156
HspAI	GCGC	2 cut(s)	400, 916
KasI	GGCGCC	1 cut(s)	399
Ksp22I	TGATCA	2 cut(s)	540, 1113
Kzo9I	GATC	6 cut(s)	540, 706, 718, 927, 1113, 1198
LmnI	GCTCC	2 cut(s)	21, 364
Lsp1109I	GCAGC	3 cut(s)	154, 157, 160
LweI	GCATC	1 cut(s)	766
MaeI	CTAG	1 cut(s)	1311
MaeII	ACGT	2 cut(s)	169, 339
MaeIII	GTNAC	2 cut(s)	165, 625
MalI	GATC	6 cut(s)	542, 708, 720, 929, 1115, 1200
MboI	GATC	6 cut(s)	540, 706, 718, 927, 1113, 1198
MboII	GAAGA	7 cut(s)	211, 262, 584, 826, 1396, 1476, 1479
MflI	RGATCY	1 cut(s)	1198
MlsI	TGGCCA	2 cut(s)	449, 1451
MluCI	AATT	3 cut(s)	694, 1210, 1388
MluNI	TGGCCA	2 cut(s)	449, 1451
Mly113I	GGCGCC	1 cut(s)	400
MlyI	GAGTC	5 cut(s)	77, 173, 436, 556, 748
MmeI	TCCRAC	1 cut(s)	325
Mox20I	TGGCCA	2 cut(s)	449, 1451
MroXI	GAANNNNTTC	1 cut(s)	794
MscI	TGGCCA	2 cut(s)	449, 1451
MseI	TTAA	6 cut(s)	384, 594, 633, 1073, 1242, 1391
MslI	CAYNNNNRTG	2 cut(s)	250, 1146
Msp20I	TGGCCA	2 cut(s)	449, 1451
MspI	CCGG	4 cut(s)	355, 1028, 1082, 1401
MspR9I	CCNGG	4 cut(s)	104, 227, 355, 1083
Mva1269I	GAATGC	1 cut(s)	895
MvaI	CCWGG	2 cut(s)	104, 227
MvnI	CGCG	1 cut(s)	120
MwoI	GCNNNNNNNGC	4 cut(s)	148, 157, 1138, 1306
NarI	GGCGCC	1 cut(s)	400
NciI	CCSGG	2 cut(s)	355, 1083
NcoI	CCATGG	1 cut(s)	1045
NdeI	CATATG	1 cut(s)	1147
NdeII	GATC	6 cut(s)	540, 706, 718, 927, 1113, 1198
NlaIII	CATG	8 cut(s)	255, 364, 491, 899, 951, 1049, 1141, 1156
NlaIV	GGNNCC	4 cut(s)	23, 401, 1200, 1308
NmuCI	GTSAC	1 cut(s)	165
NsbI	TGCGCA	1 cut(s)	917
NspI	RCATGY	2 cut(s)	899, 1141
PceI	AGGCCT	1 cut(s)	616
PciI	ACATGT	1 cut(s)	895
PctI	GAATGC	1 cut(s)	895
PdmI	GAANNNNTTC	1 cut(s)	794
PfeI	GAWTC	3 cut(s)	643, 769, 1314
PflFI	GACNNNGTC	1 cut(s)	341
PflMI	CCANNNNNTGG	1 cut(s)	690
PfoI	TCCNGGA	1 cut(s)	353
PkrI	GCNGC	3 cut(s)	144, 147, 150
PleI	GAGTC	5 cut(s)	76, 172, 436, 555, 748
PluTI	GGCGCC	1 cut(s)	403
PpsI	GAGTC	5 cut(s)	76, 172, 436, 555, 748
PscI	ACATGT	1 cut(s)	895
PsiI	TTATAA	1 cut(s)	1323
Psp6I	CCWGG	2 cut(s)	102, 225
PspGI	CCWGG	2 cut(s)	102, 225
PspN4I	GGNNCC	4 cut(s)	23, 401, 1200, 1308
PspPI	GGNCC	1 cut(s)	106
PsuI	RGATCY	1 cut(s)	1198
PsyI	GACNNNGTC	1 cut(s)	341
RsaI	GTAC	2 cut(s)	281, 1043
RsaNI	GTAC	2 cut(s)	280, 1042
RseI	CAYNNNNRTG	2 cut(s)	250, 1146
SalI	GTCGAC	1 cut(s)	335
SaqAI	TTAA	6 cut(s)	384, 594, 633, 1073, 1242, 1391
SatI	GCNGC	3 cut(s)	143, 146, 149
Sau3AI	GATC	6 cut(s)	540, 706, 718, 927, 1113, 1198
Sau96I	GGNCC	1 cut(s)	106
SchI	GAGTC	5 cut(s)	77, 173, 436, 556, 748
ScrFI	CCNGG	4 cut(s)	104, 227, 355, 1083
SfaNI	GCATC	1 cut(s)	766
SfoI	GGCGCC	1 cut(s)	401
SmiMI	CAYNNNNRTG	2 cut(s)	250, 1146
SmlI	CTYRAG	1 cut(s)	1301
SmoI	CTYRAG	1 cut(s)	1301
Sse9I	AATT	3 cut(s)	694, 1210, 1388
SseBI	AGGCCT	1 cut(s)	616
SsiI	CCGC	6 cut(s)	52, 86, 118, 312, 1202, 1418
SspDI	GGCGCC	1 cut(s)	399
SspMI	CTAG	1 cut(s)	1311
StuI	AGGCCT	1 cut(s)	616
StyD4I	CCNGG	4 cut(s)	102, 225, 353, 1081
StyI	CCWWGG	2 cut(s)	450, 1045
TaiI	ACGT	2 cut(s)	172, 342
TaqI	TCGA	7 cut(s)	336, 839, 977, 1215, 1317, 1346, 1482
TasI	AATT	3 cut(s)	694, 1210, 1388
TatI	WGTACW	1 cut(s)	279
TfiI	GAWTC	3 cut(s)	643, 769, 1314
Tru1I	TTAA	6 cut(s)	384, 594, 633, 1073, 1242, 1391
Tru9I	TTAA	6 cut(s)	384, 594, 633, 1073, 1242, 1391
TscAI	CASTG	3 cut(s)	102, 327, 1042
TseFI	GTSAC	1 cut(s)	165
TseI	GCWGC	3 cut(s)	142, 145, 148
Tsp45I	GTSAC	1 cut(s)	165
TspDTI	ATGAA	6 cut(s)	476, 803, 924, 1008, 1070, 1491
TspRI	CASTG	3 cut(s)	102, 327, 1042
Tth111I	GACNNNGTC	1 cut(s)	341
Van91I	CCANNNNNTGG	1 cut(s)	690
XapI	RAATTY	2 cut(s)	694, 1210
XceI	RCATGY	2 cut(s)	899, 1141
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1273
XmiI	GTMKAC	1 cut(s)	336
XmnI	GAANNNNTTC	1 cut(s)	794
XspI	CTAG	1 cut(s)	1311
ZraI	GACGTC	1 cut(s)	340

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.