Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr9

Orthogroup ID

OG0015114

Physical Location & Seq

Genomic Coordinates Forward (+)

18636268 .. 18638017

Gene Structure 1750 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom09g18040.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1707 bp

ATGAAGCAACATTCTGTGCAAGGGTGCGATGTTCGCACAATTTGGATTTTATATCAATATTATCATAAATTTAGGGTATTAAATTTGGTTATTTTATCAAAATTCCCCCGACGAAATGAGACTAAAGTAAGGGGTAGGTGTTTTCATTCAGGACAAACATGCGGCCGCGGGAAAAAAAAACTACCTGAGAGAAATGGCAGGATGCTAATCAGACAAAGAACAAGGCGCCTCCTAATCCTAAATTTCTTCCGCCGGTTCACGACAACCGAGTCGACTCAGCCCCAACTCGCCGCCGCCGCCGCCGTTCCATCCCCGGTCGACCCGGCCCACCTCCTCCGGGTCTGTACCATTCTCTACCAGCAACAGAATTCGCCCGAGTCACGTCTCCACTCGAACCTCAACTCCTCCGCCTTCCAACTCACCCACGAGTTCTTCCTCCAGGTCTGCAACTCCTTCCCCCTTTCATGGCGGCCCGTCTACCTCTTCTTCCGCTACACTCAGTCCCACCACCCCGATTTCACCCACACCGCCGTCTCCTTCAACAAAATGCTCGACGTCATCGGCAAGTCCAGGAACATCCAGCTCTTCTGGGAAACCCTCCATGAGATGGGACGTCGTCATTTGGTGAATCGCAAGACTTTTCTGATTGCTCTCAGGACGCTGGCCCAGGCCAGGGAGTTGAACAAGTGTGTCGATTTCTTTCACGCCATGAATGGGTTTGGATTTGGGTACGATTTGGGGAATTTGAATATGGTGGTTGAGGATTTGTGTGGGTCGAAGCTCGTCGTTGAGGCGAGATTTCTGGTTTTGAAGCTGAAGGAATCGATTCGGCCCGATGGGTTTACTTACAGGTGTTTGATTCAAGGTTTTTGCGATGTGGGTGATTTGATCGAGGCTTCAAAGATTTGGAATTTGATGGTGGATGAAGGGTTCGACCCGGATATCGATGCCGTTGAGAAGATGATGGAGACCCTTTTCAAGACGAATCGATACGGCGAGGCGCTGAAGGTTTTCCAGATGATGAGGGTGAACAGAATGGAGGATTTGGGTCTCTCAACTTACAGGCTTGTGATTGAGTGGATGTGTAAAAGGGGCAAGATAGAGGAAGCACATGAGGTGTTTGAGGAAATGCACAAGAGAAGGATTGAGGCAGATAATTCGACATTGGCGTCACTGGTTTACGGGCTTTTAGCAAGAGGACGAGTTACAATGGCGTTCAAGGTTGTGGAAGGGATCGAAAAGCCGGATATTAGCTTGTACCATGGGTTGATCAAGGGGCTTTTGAGGTTGAGAAAGGCGCGCGACGCGACGGAAGTGTTTAGGGAGATGATCAGAAGACGGTGTGAGCCTAACATGCACACTTATATCATGCTATTGCAAGGGCATCTGGGGAAGAGAGGGAGGAAGGGATCGGATCCTCTGGTGAATTTCGACACCATTTTTGTTGGGGGTTTGGTGAAGGCAGGGAAGTCGTTGGAAGCCACCAAGTATGTGGAGAGGGTGATTAAAAGAGGACTCGAGGTCCCTAGATTTGATTACAACAAGTTTTTGCACTATTACTCAAATGAAGAAGGGGTGGAGATGTTTGAGGAGGTGGGGAAGAAGTTCAGGGAGGTCGGGTTGGTGGATTTGGCGGATATTTTTCAGAGGTACGGGGAGAAAATGGCGACAAGAGATAGAAGAAGAAATAGGGCAGTAGAGACGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003723 GO:0003824 GO:0004518 GO:0004519 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0006139 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009451 GO:0009987 GO:0016070 GO:0016787 GO:0016788 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044424 GO:0044464 GO:0046483 GO:0071704 GO:0090304 GO:0090305 GO:0097159 GO:1901360 GO:1901363

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

PPR PPR_1 PPR_2

Protein Analysis

569

Amino Acids

66.3

Weight (kDa)

9.66

Isoelectric Point (pI)

43.33

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PPR_1	PF12854	276 - 307	4.5e-06	PPR repeat
PPR_2	PF13041	278 - 315	5.6e-06	PPR repeat family
PPR_2	PF13041	353 - 396	2e-09	PPR repeat family
PPR_3	PF13812	414 - 459	6.5e-06	Pentatricopeptide repeat domain
PPR_2	PF13041	415 - 461	1e-09	PPR repeat family

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

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Orthologous Genes (Group: OG0015114)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G26500
fragaria_vesca	FvH4_4g30220
malus_domestica	MD09G1267500.v1.1
prunus_persica	Prupe.1G285700_v2.0.a1
pyrus_communis	pycom09g18040
rosa_chinensis	RchiOBHm_Chr4g0438541
rosa_laevigata	RLG00000006353
rosa_multiflora	Rmu_sc0002327.1_g000006
rosa_roxburghii	Rroxscaffold_5G00379540
rosa_rugosa	Rorug04G0311200
rosa_samantha	Rh4AG361700 Rh4BG373000 Rh4CG387000 Rh4DG367700
rosa_wichuraiana	Rw0G006630 Rw0G016580

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	2 cut(s)	268, 1168
AatII	GACGTC	2 cut(s)	558, 616
AccB1I	GGYRCC	1 cut(s)	225
AccB7I	CCANNNNNTGG	1 cut(s)	607
AccI	GTMKAC	3 cut(s)	272, 318, 477
AccII	CGCG	4 cut(s)	168, 1300, 1302, 1307
AclWI	GGATC	4 cut(s)	1241, 1409, 1417, 1422
AcoI	YGGCCR	1 cut(s)	163
AcsI	RAATTY	8 cut(s)	68, 82, 101, 241, 367, 742, 910, 1426
AcuI	CTGAAG	2 cut(s)	836, 1025
AcyI	GRCGYC	4 cut(s)	226, 555, 613, 1169
AfaI	GTAC	4 cut(s)	346, 731, 1259, 1652
AfiI	CCNNNNNNNGG	6 cut(s)	337, 465, 607, 672, 673, 714
AgsI	TTSAA	8 cut(s)	541, 682, 748, 811, 863, 900, 979, 1219
AhdI	GACNNNNNGTC	1 cut(s)	1520
AjiI	CACGTC	2 cut(s)	383, 1704
AjnI	CCWGG	4 cut(s)	438, 569, 666, 671
AloI	GAACNNNNNNTCC	4 cut(s)	386, 418, 914, 946
AluBI	AGCT	4 cut(s)	583, 781, 814, 1254
AluI	AGCT	4 cut(s)	583, 781, 814, 1254
Alw26I	GTCTC	6 cut(s)	113, 389, 538, 962, 1055, 1694
AlwI	GGATC	4 cut(s)	1241, 1409, 1417, 1422
Ama87I	CYCGRG	2 cut(s)	374, 1517
AoxI	GGCC	6 cut(s)	163, 324, 470, 663, 669, 830
ApoI	RAATTY	8 cut(s)	68, 82, 101, 241, 367, 742, 910, 1426
ArsI	GACNNNNNNTTYG	2 cut(s)	1424, 1456
Asp700I	GAANNNNTTC	3 cut(s)	825, 1010, 1604
AspLEI	GCGC	4 cut(s)	228, 1003, 1300, 1302
AspS9I	GGNCC	5 cut(s)	325, 471, 664, 831, 1522
AsuC2I	CCSGG	4 cut(s)	314, 323, 338, 938
AsuHPI	GGTGA	8 cut(s)	412, 511, 637, 893, 1039, 1435, 1468, 1513
AvaI	CYCGRG	2 cut(s)	374, 1517
AvaII	GGWCC	1 cut(s)	1522
BamHI	GGATCC	1 cut(s)	1414
BanI	GGYRCC	1 cut(s)	225
BauI	CACGAG	1 cut(s)	425
BbsI	GAAGAC	1 cut(s)	1342
BccI	CCATC	5 cut(s)	316, 601, 830, 910, 958
BceAI	ACGGC	4 cut(s)	287, 515, 935, 1009
BcgI	CGANNNNNNTGC	4 cut(s)	1140, 1174, 1452, 1486
BciT130I	CCWGG	4 cut(s)	440, 571, 668, 673
BclI	TGATCA	2 cut(s)	1269, 1329
BcnI	CCSGG	4 cut(s)	314, 323, 338, 938
BcoDI	GTCTC	6 cut(s)	113, 389, 538, 962, 1055, 1694
BfaI	CTAG	1 cut(s)	1527
BfoI	RGCGCY	2 cut(s)	229, 1004
BisI	GCNGC	7 cut(s)	163, 166, 291, 294, 297, 300, 470
BlsI	GCNGC	7 cut(s)	164, 167, 292, 295, 298, 301, 471
Bme1390I	CCNGG	8 cut(s)	314, 323, 338, 440, 571, 668, 673, 938
Bme18I	GGWCC	1 cut(s)	1522
BmeRI	GACNNNNNGTC	1 cut(s)	1520
BmeT110I	CYCGRG	2 cut(s)	374, 1517
BmgBI	CACGTC	2 cut(s)	383, 1704
BmgT120I	GGNCC	5 cut(s)	325, 471, 664, 831, 1522
BmiI	GGNNCC	3 cut(s)	227, 1416, 1524
BmrFI	CCNGG	8 cut(s)	314, 323, 338, 440, 571, 668, 673, 938
BmsI	GCATC	3 cut(s)	192, 937, 1393
BpiI	GAAGAC	1 cut(s)	1342
BpmI	CTGGAG	1 cut(s)	422
BpuMI	CCSGG	4 cut(s)	314, 323, 338, 938
Bsa29I	ATCGAT	3 cut(s)	824, 945, 988
BsaBI	GATNNNNATC	1 cut(s)	206
BsaHI	GRCGYC	4 cut(s)	226, 555, 613, 1169
BsaI	GGTCTC	2 cut(s)	962, 1055
BsaJI	CCNNGG	5 cut(s)	166, 312, 666, 672, 1261
BsaXI	ACNNNNNCTCC	4 cut(s)	386, 416, 1604, 1634
Bsc4I	CCNNNNNNNGG	6 cut(s)	337, 465, 607, 672, 673, 714
Bse118I	RCCGGY	1 cut(s)	252
Bse1I	ACTGG	1 cut(s)	1179
Bse8I	GATNNNNATC	1 cut(s)	206
BseBI	CCWGG	4 cut(s)	440, 571, 668, 673
BseCI	ATCGAT	3 cut(s)	824, 945, 988
BseDI	CCNNGG	5 cut(s)	166, 312, 666, 672, 1261
BseGI	GGATG	5 cut(s)	207, 308, 576, 928, 1086
BseJI	GATNNNNATC	1 cut(s)	206
BseLI	CCNNNNNNNGG	6 cut(s)	337, 465, 607, 672, 673, 714
BseMII	CTCAG	4 cut(s)	177, 290, 512, 667
BseNI	ACTGG	1 cut(s)	1179
BsePI	GCGCGC	1 cut(s)	1298
BseRI	GAGGAG	3 cut(s)	323, 394, 1604
BseX3I	CGGCCG	1 cut(s)	163
Bsh1236I	CGCG	4 cut(s)	168, 1300, 1302, 1307
Bsh1285I	CGRYCG	2 cut(s)	166, 318
BshFI	GGCC	6 cut(s)	165, 326, 472, 665, 671, 832
BshNI	GGYRCC	1 cut(s)	225
BshVI	ATCGAT	3 cut(s)	824, 945, 988
BsiEI	CGRYCG	2 cut(s)	166, 318
BsiHKCI	CYCGRG	2 cut(s)	374, 1517
BsiSI	CCGG	6 cut(s)	253, 314, 323, 337, 938, 1244
BslFI	GGGAC	3 cut(s)	487, 624, 1508
BslI	CCNNNNNNNGG	6 cut(s)	337, 465, 607, 672, 673, 714
BsmAI	GTCTC	6 cut(s)	113, 389, 538, 962, 1055, 1694
BsmBI	CGTCTC	3 cut(s)	389, 538, 1694
BsmFI	GGGAC	3 cut(s)	487, 624, 1508
BsnI	GGCC	6 cut(s)	165, 326, 472, 665, 671, 832
Bso31I	GGTCTC	2 cut(s)	962, 1055
BsoBI	CYCGRG	2 cut(s)	374, 1517
Bsp143I	GATC	6 cut(s)	888, 1233, 1269, 1329, 1409, 1414
Bsp19I	CCATGG	1 cut(s)	1261
BspANI	GGCC	6 cut(s)	165, 326, 472, 665, 671, 832
BspCNI	CTCAG	4 cut(s)	178, 289, 511, 666
BspDI	ATCGAT	3 cut(s)	824, 945, 988
BspFNI	CGCG	4 cut(s)	168, 1300, 1302, 1307
BspLI	GGNNCC	3 cut(s)	227, 1416, 1524
BspPI	GGATC	4 cut(s)	1241, 1409, 1417, 1422
BspQI	GCTCTTC	1 cut(s)	590
BspT107I	GGYRCC	1 cut(s)	225
BspTNI	GGTCTC	2 cut(s)	962, 1055
BsrFI	RCCGGY	1 cut(s)	252
BsrI	ACTGG	1 cut(s)	1179
BssAI	RCCGGY	1 cut(s)	252
BssECI	CCNNGG	5 cut(s)	166, 312, 666, 672, 1261
BssHII	GCGCGC	1 cut(s)	1298
BssMI	GATC	6 cut(s)	888, 1233, 1269, 1329, 1409, 1414
BssNI	GRCGYC	4 cut(s)	226, 555, 613, 1169
BssSI	CACGAG	1 cut(s)	425
BssT1I	CCWWGG	1 cut(s)	1261
Bst2BI	CACGAG	1 cut(s)	425
Bst2UI	CCWGG	4 cut(s)	440, 571, 668, 673
Bst4CI	ACNGT	1 cut(s)	1341
Bst6I	CTCTTC	3 cut(s)	488, 590, 1388
BstACI	GRCGYC	4 cut(s)	226, 555, 613, 1169
BstC8I	GCNNGC	2 cut(s)	663, 1300
BstDEI	CTNAG	4 cut(s)	186, 276, 498, 653
BstDSI	CCRYGG	2 cut(s)	166, 1261
BstF5I	GGATG	5 cut(s)	207, 308, 576, 928, 1086
BstFNI	CGCG	4 cut(s)	168, 1300, 1302, 1307
BstH2I	RGCGCY	2 cut(s)	229, 1004
BstHHI	GCGC	4 cut(s)	228, 1003, 1300, 1302
BstKTI	GATC	6 cut(s)	891, 1236, 1272, 1332, 1412, 1417
BstMAI	GTCTC	6 cut(s)	113, 389, 538, 962, 1055, 1694
BstMBI	GATC	6 cut(s)	888, 1233, 1269, 1329, 1409, 1414
BstMCI	CGRYCG	2 cut(s)	166, 318
BstMWI	GCNNNNNNNGC	5 cut(s)	33, 296, 299, 1304, 1354
BstNI	CCWGG	4 cut(s)	440, 571, 668, 673
BstNSI	RCATGY	2 cut(s)	162, 1357
BstSCI	CCNGG	8 cut(s)	312, 321, 336, 438, 569, 666, 671, 936
BstUI	CGCG	4 cut(s)	168, 1300, 1302, 1307
BstV2I	GAAGAC	1 cut(s)	1342
BstX2I	RGATCY	1 cut(s)	1414
BstXI	CCANNNNNNTGG	1 cut(s)	1492
BstYI	RGATCY	1 cut(s)	1414
BstZI	CGGCCG	1 cut(s)	163
Bsu15I	ATCGAT	3 cut(s)	824, 945, 988
BsuRI	GGCC	6 cut(s)	165, 326, 472, 665, 671, 832
BsuTUI	ATCGAT	3 cut(s)	824, 945, 988
BtgI	CCRYGG	2 cut(s)	166, 1261
BtgZI	GCGATG	2 cut(s)	42, 888
BtrI	CACGTC	2 cut(s)	383, 1704
BtsCI	GGATG	5 cut(s)	207, 308, 576, 928, 1086
BtsIMutI	CAGTG	1 cut(s)	1172
Cac8I	GCNNGC	2 cut(s)	663, 1300
CciNI	GCGGCCGC	1 cut(s)	163
CfoI	GCGC	4 cut(s)	228, 1003, 1300, 1302
Cfr10I	RCCGGY	1 cut(s)	252
Cfr13I	GGNCC	5 cut(s)	325, 471, 664, 831, 1522
Cfr42I	CCGCGG	1 cut(s)	169
ClaI	ATCGAT	3 cut(s)	824, 945, 988
CseI	GACGC	3 cut(s)	667, 1158, 1313
Csp6I	GTAC	4 cut(s)	345, 730, 1258, 1651
CviAII	CATG	8 cut(s)	159, 465, 602, 709, 1112, 1262, 1354, 1369
CviQI	GTAC	4 cut(s)	345, 730, 1258, 1651
DdeI	CTNAG	4 cut(s)	186, 276, 498, 653
DinI	GGCGCC	1 cut(s)	227
DpnI	GATC	6 cut(s)	890, 1235, 1271, 1331, 1411, 1416
DpnII	GATC	6 cut(s)	888, 1233, 1269, 1329, 1409, 1414
DrdI	GACNNNNNNGTC	2 cut(s)	268, 1168
DriI	GACNNNNNGTC	1 cut(s)	1520
DseDI	GACNNNNNNGTC	2 cut(s)	268, 1168
EaeI	YGGCCR	1 cut(s)	163
EagI	CGGCCG	1 cut(s)	163
Eam1104I	CTCTTC	3 cut(s)	488, 590, 1388
Eam1105I	GACNNNNNGTC	1 cut(s)	1520
EarI	CTCTTC	3 cut(s)	488, 590, 1388
EciI	GGCGGA	3 cut(s)	239, 397, 1649
EclXI	CGGCCG	1 cut(s)	163
Eco130I	CCWWGG	1 cut(s)	1261
Eco31I	GGTCTC	2 cut(s)	962, 1055
Eco32I	GATATC	1 cut(s)	943
Eco47I	GGWCC	1 cut(s)	1522
Eco52I	CGGCCG	1 cut(s)	163
Eco57I	CTGAAG	2 cut(s)	836, 1025
Eco88I	CYCGRG	2 cut(s)	374, 1517
EcoO109I	RGGNCCY	1 cut(s)	1522
EcoRI	GAATTC	1 cut(s)	367
EcoRII	CCWGG	4 cut(s)	438, 569, 666, 671
EcoRV	GATATC	1 cut(s)	943
EcoT14I	CCWWGG	1 cut(s)	1261
EgeI	GGCGCC	1 cut(s)	227
EheI	GGCGCC	1 cut(s)	227
ErhI	CCWWGG	1 cut(s)	1261
Esp3I	CGTCTC	3 cut(s)	389, 538, 1694
FaeI	CATG	8 cut(s)	162, 468, 605, 712, 1115, 1265, 1357, 1372
FaqI	GGGAC	3 cut(s)	487, 624, 1508
FatI	CATG	8 cut(s)	158, 464, 601, 708, 1111, 1261, 1353, 1368
FauI	CCCGC	1 cut(s)	161
FbaI	TGATCA	2 cut(s)	1269, 1329
FblI	GTMKAC	3 cut(s)	272, 318, 477
Fnu4HI	GCNGC	7 cut(s)	163, 166, 291, 294, 297, 300, 470
FokI	GGATG	5 cut(s)	214, 295, 563, 935, 1093
Fsp4HI	GCNGC	7 cut(s)	163, 166, 291, 294, 297, 300, 470
FspBI	CTAG	1 cut(s)	1527
GlaI	GCGC	4 cut(s)	227, 1002, 1299, 1301
GluI	GCNGC	7 cut(s)	163, 166, 291, 294, 297, 300, 470
GsuI	CTGGAG	1 cut(s)	422
HaeII	RGCGCY	2 cut(s)	229, 1004
HaeIII	GGCC	6 cut(s)	165, 326, 472, 665, 671, 832
HapII	CCGG	6 cut(s)	253, 314, 323, 337, 938, 1244
HgaI	GACGC	3 cut(s)	667, 1158, 1313
HhaI	GCGC	4 cut(s)	228, 1003, 1300, 1302
Hin1I	GRCGYC	4 cut(s)	226, 555, 613, 1169
Hin1II	CATG	8 cut(s)	162, 468, 605, 712, 1115, 1265, 1357, 1372
Hin6I	GCGC	4 cut(s)	226, 1001, 1298, 1300
HinP1I	GCGC	4 cut(s)	226, 1001, 1298, 1300
HincII	GTYRAC	2 cut(s)	273, 319
HindII	GTYRAC	2 cut(s)	273, 319
HinfI	GANTC	9 cut(s)	269, 274, 377, 628, 821, 826, 859, 985, 1515
HpaII	CCGG	6 cut(s)	253, 314, 323, 337, 938, 1244
HphI	GGTGA	8 cut(s)	412, 511, 637, 893, 1039, 1435, 1468, 1513
Hpy166II	GTNNAC	7 cut(s)	258, 273, 319, 478, 843, 1030, 1180
Hpy188I	TCNGA	5 cut(s)	212, 645, 1334, 1414, 1647
Hpy188III	TCNNGA	5 cut(s)	150, 259, 655, 979, 1015
Hpy8I	GTNNAC	7 cut(s)	258, 273, 319, 478, 843, 1030, 1180
Hpy99I	CGWCG	6 cut(s)	114, 557, 618, 788, 1307, 1312
HpyCH4III	ACNGT	1 cut(s)	1341
HpyCH4IV	ACGT	4 cut(s)	382, 555, 613, 1703
HpyCH4V	TGCA	6 cut(s)	19, 447, 1132, 1357, 1378, 1552
HpyF10VI	GCNNNNNNNGC	5 cut(s)	33, 296, 299, 1304, 1354
HpyF3I	CTNAG	4 cut(s)	186, 276, 498, 653
HpySE526I	ACGT	4 cut(s)	382, 555, 613, 1703
Hsp92I	GRCGYC	4 cut(s)	226, 555, 613, 1169
Hsp92II	CATG	8 cut(s)	162, 468, 605, 712, 1115, 1265, 1357, 1372
HspAI	GCGC	4 cut(s)	226, 1001, 1298, 1300
KasI	GGCGCC	1 cut(s)	225
Ksp22I	TGATCA	2 cut(s)	1269, 1329
KspI	CCGCGG	1 cut(s)	169
Kzo9I	GATC	6 cut(s)	888, 1233, 1269, 1329, 1409, 1414
LguI	GCTCTTC	1 cut(s)	590
LweI	GCATC	3 cut(s)	192, 937, 1393
MaeI	CTAG	1 cut(s)	1527
MaeII	ACGT	4 cut(s)	382, 555, 613, 1703
MaeIII	GTNAC	3 cut(s)	378, 1170, 1204
MalI	GATC	6 cut(s)	890, 1235, 1271, 1331, 1411, 1416
MboI	GATC	6 cut(s)	888, 1233, 1269, 1329, 1409, 1414
MflI	RGATCY	1 cut(s)	1414
Mly113I	GGCGCC	1 cut(s)	226
MlyI	GAGTC	4 cut(s)	268, 278, 386, 1509
MmeI	TCCRAC	2 cut(s)	439, 1455
MroXI	GAANNNNTTC	3 cut(s)	825, 1010, 1604
MseI	TTAA	2 cut(s)	80, 1506
MspA1I	CMGCKG	1 cut(s)	168
MspI	CCGG	6 cut(s)	253, 314, 323, 337, 938, 1244
MspR9I	CCNGG	8 cut(s)	314, 323, 338, 440, 571, 668, 673, 938
MvaI	CCWGG	4 cut(s)	440, 571, 668, 673
MvnI	CGCG	4 cut(s)	168, 1300, 1302, 1307
MwoI	GCNNNNNNNGC	5 cut(s)	33, 296, 299, 1304, 1354
NarI	GGCGCC	1 cut(s)	226
NciI	CCSGG	4 cut(s)	314, 323, 338, 938
NcoI	CCATGG	1 cut(s)	1261
NdeII	GATC	6 cut(s)	888, 1233, 1269, 1329, 1409, 1414
NlaIII	CATG	8 cut(s)	162, 468, 605, 712, 1115, 1265, 1357, 1372
NlaIV	GGNNCC	3 cut(s)	227, 1416, 1524
NmuCI	GTSAC	2 cut(s)	378, 1170
NotI	GCGGCCGC	1 cut(s)	163
NspI	RCATGY	2 cut(s)	162, 1357
PaeR7I	CTCGAG	1 cut(s)	1517
PauI	GCGCGC	1 cut(s)	1298
PciSI	GCTCTTC	1 cut(s)	590
PcsI	WCGNNNNNNNCGW	1 cut(s)	1166
PdmI	GAANNNNTTC	3 cut(s)	825, 1010, 1604
PfeI	GAWTC	5 cut(s)	628, 821, 826, 859, 985
PflFI	GACNNNGTC	1 cut(s)	615
PflMI	CCANNNNNTGG	1 cut(s)	607
PfoI	TCCNGGA	1 cut(s)	569
PkrI	GCNGC	7 cut(s)	164, 167, 292, 295, 298, 301, 471
PleI	GAGTC	4 cut(s)	268, 277, 385, 1509
PluTI	GGCGCC	1 cut(s)	229
PpsI	GAGTC	4 cut(s)	268, 277, 385, 1509
PpuMI	RGGWCCY	1 cut(s)	1522
Psp5II	RGGWCCY	1 cut(s)	1522
Psp6I	CCWGG	4 cut(s)	438, 569, 666, 671
PspGI	CCWGG	4 cut(s)	438, 569, 666, 671
PspN4I	GGNNCC	3 cut(s)	227, 1416, 1524
PspPI	GGNCC	5 cut(s)	325, 471, 664, 831, 1522
PspPPI	RGGWCCY	1 cut(s)	1522
PspXI	VCTCGAGB	1 cut(s)	1517
PsuI	RGATCY	1 cut(s)	1414
PsyI	GACNNNGTC	1 cut(s)	615
PteI	GCGCGC	1 cut(s)	1298
RsaI	GTAC	4 cut(s)	346, 731, 1259, 1652
RsaNI	GTAC	4 cut(s)	345, 730, 1258, 1651
SacII	CCGCGG	1 cut(s)	169
SalI	GTCGAC	2 cut(s)	271, 317
SapI	GCTCTTC	1 cut(s)	590
SaqAI	TTAA	2 cut(s)	80, 1506
SatI	GCNGC	7 cut(s)	163, 166, 291, 294, 297, 300, 470
Sau3AI	GATC	6 cut(s)	888, 1233, 1269, 1329, 1409, 1414
Sau96I	GGNCC	5 cut(s)	325, 471, 664, 831, 1522
SchI	GAGTC	4 cut(s)	268, 278, 386, 1509
ScrFI	CCNGG	8 cut(s)	314, 323, 338, 440, 571, 668, 673, 938
SfaNI	GCATC	3 cut(s)	192, 937, 1393
SfoI	GGCGCC	1 cut(s)	227
Sfr274I	CTCGAG	1 cut(s)	1517
Sfr303I	CCGCGG	1 cut(s)	169
SgrBI	CCGCGG	1 cut(s)	169
SinI	GGWCC	1 cut(s)	1522
SlaI	CTCGAG	1 cut(s)	1517
SmlI	CTYRAG	1 cut(s)	1517
SmoI	CTYRAG	1 cut(s)	1517
SspDI	GGCGCC	1 cut(s)	225
SspI	AATATT	1 cut(s)	59
SspMI	CTAG	1 cut(s)	1527
StyD4I	CCNGG	8 cut(s)	312, 321, 336, 438, 569, 666, 671, 936
StyI	CCWWGG	1 cut(s)	1261
TaaI	ACNGT	1 cut(s)	1341
TaiI	ACGT	4 cut(s)	385, 558, 616, 1706
TauI	GCSGC	7 cut(s)	165, 168, 293, 296, 299, 302, 472
TfiI	GAWTC	5 cut(s)	628, 821, 826, 859, 985
Tru1I	TTAA	2 cut(s)	80, 1506
Tru9I	TTAA	2 cut(s)	80, 1506
TscAI	CASTG	1 cut(s)	1179
TseFI	GTSAC	2 cut(s)	378, 1170
Tsp45I	GTSAC	2 cut(s)	378, 1170
TspDTI	ATGAA	6 cut(s)	17, 134, 453, 725, 939, 1581
TspGWI	ACGGA	1 cut(s)	1325
TspRI	CASTG	1 cut(s)	1179
Tth111I	GACNNNGTC	1 cut(s)	615
Van91I	CCANNNNNTGG	1 cut(s)	607
VpaK11BI	GGWCC	1 cut(s)	1522
XapI	RAATTY	8 cut(s)	68, 82, 101, 241, 367, 742, 910, 1426
XceI	RCATGY	2 cut(s)	162, 1357
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1489
XhoI	CTCGAG	1 cut(s)	1517
XmiI	GTMKAC	3 cut(s)	272, 318, 477
XmnI	GAANNNNTTC	3 cut(s)	825, 1010, 1604
XspI	CTAG	1 cut(s)	1527
ZraI	GACGTC	2 cut(s)	556, 614

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.