MD09G1281800.v1.1

Belongs to the cytochrome P450 family

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr09
Physical Location & Seq
Forward (+)
35875020 .. 35877124
2105 bp
Loading structure...
UTR
Exon/CDS
Intron
MD09G1281800.v1.1.491

Sequence Viewer

Length: 291 bp
ATGCTCATTCAAGTGCTACTCCTCCACAACCTCCTTTGTTACCTGTCCTTGATCCAAGTCATCTTCAGTACAAATCTTGTATTTCACTCTCGGATTAAGCACCTCGATATTGACTATCACTTTGTCAGAGAGAAGGTTCAAAAAGGGGATCTTTTGGTTCAATACATAACTACAAAGGAGCAACTGGCAGATTTGTTCACGAAGGGCTACAAAATTCTGATTTTATTAGACATTGCTGCAATCTTAACCTTGGGAACCCACGTTAAGATTGAGGGGAGTAATAACAGATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
Pfam Domains
Protein Families

Protein Analysis

97

Amino Acids

11.09

Weight (kDa)

8.79

Isoelectric Point (pI)

14.99

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes (Group: OG0017871)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AclWI GGATC 2 cut(s) 46, 156
AcsI RAATTY 1 cut(s) 213
AcuI CTGAAG 1 cut(s) 49
AfaI GTAC 1 cut(s) 70
AgsI TTSAA 3 cut(s) 11, 140, 161
AlwI GGATC 2 cut(s) 46, 156
ApeKI GCWGC 1 cut(s) 236
ApoI RAATTY 1 cut(s) 213
ArsI GACNNNNNNTTYG 2 cut(s) 104, 136
BbvI GCAGC 1 cut(s) 223
BisI GCNGC 1 cut(s) 237
BlsI GCNGC 1 cut(s) 238
BmiI GGNNCC 1 cut(s) 256
BsaJI CCNNGG 1 cut(s) 249
Bse1I ACTGG 1 cut(s) 189
Bse3DI GCAATG 1 cut(s) 231
BseDI CCNNGG 1 cut(s) 249
BseMI GCAATG 1 cut(s) 231
BseNI ACTGG 1 cut(s) 189
BseRI GAGGAG 1 cut(s) 11
BseXI GCAGC 1 cut(s) 223
Bsp143I GATC 2 cut(s) 51, 148
BspLI GGNNCC 1 cut(s) 256
BspPI GGATC 2 cut(s) 46, 156
BsrDI GCAATG 1 cut(s) 231
BsrI ACTGG 1 cut(s) 189
BssECI CCNNGG 1 cut(s) 249
BssMI GATC 2 cut(s) 51, 148
BssT1I CCWWGG 1 cut(s) 249
BstKTI GATC 2 cut(s) 54, 151
BstMBI GATC 2 cut(s) 51, 148
BstV1I GCAGC 1 cut(s) 223
BstX2I RGATCY 1 cut(s) 148
BstYI RGATCY 1 cut(s) 148
Csp6I GTAC 1 cut(s) 69
CviJI RGCY 1 cut(s) 207
CviKI_1 RGCY 1 cut(s) 207
CviQI GTAC 1 cut(s) 69
DpnI GATC 2 cut(s) 53, 150
DpnII GATC 2 cut(s) 51, 148
Eco130I CCWWGG 1 cut(s) 249
Eco57I CTGAAG 1 cut(s) 49
EcoT14I CCWWGG 1 cut(s) 249
ErhI CCWWGG 1 cut(s) 249
FaiI YATR 1 cut(s) 167
FalI AAGNNNNNCTT 2 cut(s) 135, 167
Fnu4HI GCNGC 1 cut(s) 237
Fsp4HI GCNGC 1 cut(s) 237
GluI GCNGC 1 cut(s) 237
Hpy166II GTNNAC 1 cut(s) 198
Hpy188I TCNGA 3 cut(s) 93, 128, 219
Hpy188III TCNNGA 1 cut(s) 199
Hpy8I GTNNAC 1 cut(s) 198
HpyAV CCTTC 2 cut(s) 127, 196
HpyCH4IV ACGT 1 cut(s) 261
HpyCH4V TGCA 1 cut(s) 239
HpySE526I ACGT 1 cut(s) 261
Kzo9I GATC 2 cut(s) 51, 148
LmnI GCTCC 1 cut(s) 178
LpnPI CCDG 2 cut(s) 56, 170
Lsp1109I GCAGC 1 cut(s) 223
MaeII ACGT 1 cut(s) 261
MaeIII GTNAC 1 cut(s) 38
MalI GATC 2 cut(s) 53, 150
MboI GATC 2 cut(s) 51, 148
MboII GAAGA 1 cut(s) 55
MflI RGATCY 1 cut(s) 148
MluCI AATT 1 cut(s) 213
MnlI CCTC 4 cut(s) 32, 41, 113, 265
MseI TTAA 3 cut(s) 96, 245, 264
MslI CAYNNNNRTG 1 cut(s) 11
NdeII GATC 2 cut(s) 51, 148
NlaIV GGNNCC 1 cut(s) 256
PkrI GCNGC 1 cut(s) 238
PspN4I GGNNCC 1 cut(s) 256
PsuI RGATCY 1 cut(s) 148
RsaI GTAC 1 cut(s) 70
RsaNI GTAC 1 cut(s) 69
RseI CAYNNNNRTG 1 cut(s) 11
SaqAI TTAA 3 cut(s) 96, 245, 264
SatI GCNGC 1 cut(s) 237
Sau3AI GATC 2 cut(s) 51, 148
SetI ASST 6 cut(s) 33, 45, 105, 138, 251, 264
SmiMI CAYNNNNRTG 1 cut(s) 11
Sse9I AATT 1 cut(s) 213
StyI CCWWGG 1 cut(s) 249
TaiI ACGT 1 cut(s) 264
TaqI TCGA 1 cut(s) 105
TasI AATT 1 cut(s) 213
TatI WGTACW 1 cut(s) 68
Tru1I TTAA 3 cut(s) 96, 245, 264
Tru9I TTAA 3 cut(s) 96, 245, 264
TseI GCWGC 1 cut(s) 236
XapI RAATTY 1 cut(s) 213
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.