pycom15g03640

LRR receptor-like serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr15
Physical Location & Seq
Forward (+)
2219955 .. 2221165
1211 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom15g03640.3

Sequence Viewer

Length: 870 bp
ATGGAGACAATGTTAAATATTCTATCTTCCATCTCGCTGGCTCATAATCCATTGTTCCATAGTCATACTAAACACGTGGAGATTGATGTGCATTTTGTTCATGAAAGAGTTCGGTGTCAAGATCTTCAAGCTCATCACAATTCTTGCTCTGAACAACTTGCATACATCATGACAAAAATACTGCATTCTCCTCGGTACTTATATCTTCGAAACAGTCTCATGATAGAGAGTCCTAGTATGAGATTGAGGGAGGGTGGTGTCTGTTTAACTATAGCTATGTTAGTCATTCAGGAAAGTGTACACACACACACACACACACACACACACACATATAGTCTGCCTTCAGTTGTAAATACTGATTTAGTTTTAATGAGAAGAAGCTTTGTTATAAGCCCTAGAATTTCTTTGAATTCGTTTAAAGATCATAAACGTCAATCAGTAAGTTTGGTTGTTTTCTTAGGTCAACTATACATCCGGGGAGTTGGCGTGAAATATGCTTATAGCTATATATATGGAAGGGAAGCTTTGGAATCACTTATGAGATTAAGGCCTGCTTCTGACTGTTTCTTTGATGATTCAGGAGCTGATATATACACATATATAATCCAAATTGTTGTGAAAATATTGCAGGATACTATTGATTCATCACCACAATATATAATATATCACATCTGGCTGTTTGACATTCCCCCTTTTTTTTTTATTCGAGCGGGGGATCTGTATTTGCCACTTTCCGTAGGTTTTGAGAGCGTGAAGTTCGACCAGAAATGCTTTCCCAGATTTTTGGAACCCACCTTCTTCATATTTAGTTCATCCTCTCTGCAATATTCATTATTATTTATTGATAAATGCCTTTTTTACAAGATTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

290

Amino Acids

33.61

Weight (kDa)

7.73

Isoelectric Point (pI)

53.17

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0017871)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 389
AccBSI CCGCTC 1 cut(s) 710
AciI CCGC 1 cut(s) 710
AclWI GGATC 1 cut(s) 723
AcsI RAATTY 2 cut(s) 399, 409
AcuI CTGAAG 1 cut(s) 327
AcvI CACGTG 1 cut(s) 76
AfaI GTAC 2 cut(s) 197, 300
AflIII ACRYGT 1 cut(s) 73
AgsI TTSAA 2 cut(s) 128, 409
AluBI AGCT 6 cut(s) 131, 275, 381, 504, 524, 584
AluI AGCT 6 cut(s) 131, 275, 381, 504, 524, 584
Alw26I GTCTC 1 cut(s) 221
AlwI GGATC 1 cut(s) 723
AlwNI CAGNNNCTG 1 cut(s) 584
AoxI GGCC 1 cut(s) 548
ApoI RAATTY 2 cut(s) 399, 409
ArsI GACNNNNNNTTYG 2 cut(s) 551, 583
Asp700I GAANNNNTTC 1 cut(s) 108
AsuC2I CCSGG 1 cut(s) 476
AsuHPI GGTGA 1 cut(s) 639
AsuII TTCGAA 1 cut(s) 208
BbrPI CACGTG 1 cut(s) 76
BccI CCATC 1 cut(s) 38
BcgI CGANNNNNNTGC 2 cut(s) 173, 207
BciVI GTATCC 1 cut(s) 625
BcnI CCSGG 1 cut(s) 476
BcoDI GTCTC 1 cut(s) 221
BfaI CTAG 2 cut(s) 234, 396
BfmI CTRYAG 1 cut(s) 270
BfuI GTATCC 1 cut(s) 625
BglII AGATCT 1 cut(s) 121
Bme1390I CCNGG 1 cut(s) 476
BmiI GGNNCC 1 cut(s) 789
BmrFI CCNGG 1 cut(s) 476
Bpu14I TTCGAA 1 cut(s) 208
BpuMI CCSGG 1 cut(s) 476
BsaAI YACGTR 1 cut(s) 76
BsaJI CCNNGG 2 cut(s) 191, 475
BsaXI ACNNNNNCTCC 3 cut(s) 26, 471, 501
BseDI CCNNGG 2 cut(s) 191, 475
BseGI GGATG 2 cut(s) 471, 812
BseRI GAGGAG 1 cut(s) 180
BshFI GGCC 1 cut(s) 550
BsiSI CCGG 1 cut(s) 475
BsmAI GTCTC 1 cut(s) 221
BsmI GAATGC 1 cut(s) 184
BsnI GGCC 1 cut(s) 550
Bsp119I TTCGAA 1 cut(s) 208
Bsp1407I TGTACA 1 cut(s) 298
Bsp143I GATC 3 cut(s) 121, 421, 715
BspACI CCGC 1 cut(s) 710
BspANI GGCC 1 cut(s) 550
BspHI TCATGA 3 cut(s) 100, 168, 219
BspLI GGNNCC 1 cut(s) 789
BspPI GGATC 1 cut(s) 723
BspT104I TTCGAA 1 cut(s) 208
BsrBI CCGCTC 1 cut(s) 710
BsrGI TGTACA 1 cut(s) 298
BssECI CCNNGG 2 cut(s) 191, 475
BssMI GATC 3 cut(s) 121, 421, 715
Bst4CI ACNGT 2 cut(s) 215, 563
BstAUI TGTACA 1 cut(s) 298
BstBAI YACGTR 1 cut(s) 76
BstBI TTCGAA 1 cut(s) 208
BstC8I GCNNGC 2 cut(s) 39, 552
BstDEI CTNAG 1 cut(s) 457
BstF5I GGATG 2 cut(s) 471, 812
BstKTI GATC 3 cut(s) 124, 424, 718
BstMAI GTCTC 1 cut(s) 221
BstMBI GATC 3 cut(s) 121, 421, 715
BstSCI CCNGG 1 cut(s) 474
BstSFI CTRYAG 1 cut(s) 270
BstX2I RGATCY 2 cut(s) 121, 715
BstXI CCANNNNNNTGG 2 cut(s) 37, 784
BstYI RGATCY 2 cut(s) 121, 715
BsuI GTATCC 1 cut(s) 625
BsuRI GGCC 1 cut(s) 550
BtsCI GGATG 2 cut(s) 471, 812
Cac8I GCNNGC 2 cut(s) 39, 552
CaiI CAGNNNCTG 1 cut(s) 584
CciI TCATGA 3 cut(s) 100, 168, 219
Csp6I GTAC 2 cut(s) 196, 299
CviAII CATG 3 cut(s) 101, 169, 220
CviQI GTAC 2 cut(s) 196, 299
DdeI CTNAG 1 cut(s) 457
DpnI GATC 3 cut(s) 123, 423, 717
DpnII GATC 3 cut(s) 121, 421, 715
DraI TTTAAA 1 cut(s) 418
Eco147I AGGCCT 1 cut(s) 550
Eco57I CTGAAG 1 cut(s) 327
Eco72I CACGTG 1 cut(s) 76
EcoRI GAATTC 1 cut(s) 409
FaeI CATG 3 cut(s) 104, 172, 223
FalI AAGNNNNNCTT 4 cut(s) 508, 540, 538, 570
FatI CATG 3 cut(s) 100, 168, 219
FauI CCCGC 1 cut(s) 703
FokI GGATG 2 cut(s) 458, 799
FspBI CTAG 2 cut(s) 234, 396
HaeIII GGCC 1 cut(s) 550
HapII CCGG 1 cut(s) 475
Hin1II CATG 3 cut(s) 104, 172, 223
HincII GTYRAC 1 cut(s) 464
HindII GTYRAC 1 cut(s) 464
HindIII AAGCTT 2 cut(s) 379, 522
HinfI GANTC 4 cut(s) 229, 530, 575, 641
HpaII CCGG 1 cut(s) 475
HphI GGTGA 1 cut(s) 639
Hpy166II GTNNAC 3 cut(s) 299, 301, 464
Hpy188I TCNGA 2 cut(s) 151, 559
Hpy188III TCNNGA 6 cut(s) 101, 119, 169, 220, 290, 579
Hpy8I GTNNAC 3 cut(s) 299, 301, 464
HpyAV CCTTC 3 cut(s) 351, 510, 805
HpyCH4III ACNGT 2 cut(s) 215, 563
HpyCH4IV ACGT 2 cut(s) 75, 430
HpyCH4V TGCA 5 cut(s) 91, 161, 184, 628, 823
HpyF3I CTNAG 1 cut(s) 457
HpySE526I ACGT 2 cut(s) 75, 430
Hsp92II CATG 3 cut(s) 104, 172, 223
Kzo9I GATC 3 cut(s) 121, 421, 715
LmnI GCTCC 1 cut(s) 581
LpnPI CCDG 9 cut(s) 23, 275, 488, 564, 564, 614, 658, 776, 790
MaeI CTAG 2 cut(s) 234, 396
MaeII ACGT 2 cut(s) 75, 430
MalI GATC 3 cut(s) 123, 423, 717
MbiI CCGCTC 1 cut(s) 710
MboI GATC 3 cut(s) 121, 421, 715
MboII GAAGA 5 cut(s) 18, 116, 197, 387, 790
MflI RGATCY 2 cut(s) 121, 715
MluCI AATT 4 cut(s) 139, 399, 409, 609
MlyI GAGTC 1 cut(s) 238
MnlI CCTC 4 cut(s) 201, 240, 244, 826
MroXI GAANNNNTTC 1 cut(s) 108
MseI TTAA 6 cut(s) 14, 266, 368, 417, 545, 868
MspI CCGG 1 cut(s) 475
MspR9I CCNGG 1 cut(s) 476
Mva1269I GAATGC 1 cut(s) 184
NciI CCSGG 1 cut(s) 476
NdeII GATC 3 cut(s) 121, 421, 715
NlaIII CATG 3 cut(s) 104, 172, 223
NlaIV GGNNCC 1 cut(s) 789
NspV TTCGAA 1 cut(s) 208
PagI TCATGA 3 cut(s) 100, 168, 219
PceI AGGCCT 1 cut(s) 550
PctI GAATGC 1 cut(s) 184
PdmI GAANNNNTTC 1 cut(s) 108
PfeI GAWTC 3 cut(s) 530, 575, 641
PleI GAGTC 1 cut(s) 237
PmaCI CACGTG 1 cut(s) 76
PmlI CACGTG 1 cut(s) 76
PpsI GAGTC 1 cut(s) 237
Ppu21I YACGTR 1 cut(s) 76
PsiI TTATAA 1 cut(s) 389
PspCI CACGTG 1 cut(s) 76
PspN4I GGNNCC 1 cut(s) 789
PstNI CAGNNNCTG 1 cut(s) 584
PsuI RGATCY 2 cut(s) 121, 715
RsaI GTAC 2 cut(s) 197, 300
RsaNI GTAC 2 cut(s) 196, 299
SaqAI TTAA 6 cut(s) 14, 266, 368, 417, 545, 868
Sau3AI GATC 3 cut(s) 121, 421, 715
SchI GAGTC 1 cut(s) 238
ScrFI CCNGG 1 cut(s) 476
SfcI CTRYAG 1 cut(s) 270
SfuI TTCGAA 1 cut(s) 208
Sse9I AATT 4 cut(s) 139, 399, 409, 609
SseBI AGGCCT 1 cut(s) 550
SsiI CCGC 1 cut(s) 710
SspI AATATT 3 cut(s) 19, 624, 827
SspMI CTAG 2 cut(s) 234, 396
StuI AGGCCT 1 cut(s) 550
StyD4I CCNGG 1 cut(s) 474
TaaI ACNGT 2 cut(s) 215, 563
TaiI ACGT 2 cut(s) 78, 433
TaqI TCGA 3 cut(s) 208, 706, 759
TasI AATT 4 cut(s) 139, 399, 409, 609
TatI WGTACW 1 cut(s) 298
TfiI GAWTC 3 cut(s) 530, 575, 641
Tru1I TTAA 6 cut(s) 14, 266, 368, 417, 545, 868
Tru9I TTAA 6 cut(s) 14, 266, 368, 417, 545, 868
TspDTI ATGAA 6 cut(s) 89, 117, 633, 790, 801, 819
TspGWI ACGGA 1 cut(s) 724
XapI RAATTY 2 cut(s) 399, 409
XmnI GAANNNNTTC 1 cut(s) 108
XspI CTAG 2 cut(s) 234, 396
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.