MD09G1288100.v1.1

Belongs to the glycosyltransferase 8 family

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr09
Physical Location & Seq
Reverse (-)
36789422 .. 36792275
2854 bp
Loading structure...
UTR
Exon/CDS
Intron
MD09G1288100.v1.1.491

Sequence Viewer

Length: 1092 bp
ATGGCTCCCGAACTCATCCCCACCAGCGTCCCCAAATTGGGTTTCACTAAAACCGCCACCCTGCCGAGTCGGGCATACGTGACTTTCTTGGCCGGCAACGGCGACTACGTGAAGGGCGTCGTCGGGTTGGCCAAGGGATTGAGGAAGGTCAATGCGGCGTACCCATTGGTCGTTGCAGTCTTGCCCGACGTCCCGGAGGAGCACCGCCGCATTCTTCAATCGCAGGGTTGCATCGTCCGTGAGATCGAACCCGTTTACCCACCCGAGAACCAGACCCAGTTCGCCATGGCCTATTACGTCATCAACTACTCGAAGCTGCGGATTTGGGAGAGAAGTGGAAAACCAACCCATCAGGTTGGCTGCTGTGCTGAAGGTTTTCAAACAGTGGGGTGGTTTTCAAAAAGTGAAGTTTGTGGAGTACGAGAAGATGATATACTTGGACGGGACATTCAGGTGTACGACAACATAGACCACCTCTTTGACTTGCCAGATGGACATTTCTACGCCGTGATGGATTGTTTCTGTAAGAAAACGTGGAGTCACACGCCGCAATACCAAATCGGGTACTGCCAGCAGTGCCCGGAGAAGGTCCAGTGGCTCACATCGGAGCTTGGCCCACCGCCGTCGCTCTACTTCAACGCGGGCATGTTCGTGTTCGAGCCCGGCCTCGAGACCTACCATGACCTTTTGAGGACTCTCAGAGGGACCCCTCCGACCCCGTTTGCAGAACAGGACTTGTTAAATATGTATTTCCGGAAAATATACAAGCCAATTCCTTTGGTTTACAATTTGGTCCTGGCCATGCTGTGGCGTCACCCGGAGAATGTGGAGCTAGACAAAGTCAAAGTCGGATCGAAGCCGTGGAGGTATACAGGGAAGGAGGAGAACATGCAGAGGGAGGACATTAAGATGCTAGTGAAGAAATGGTGGGGTATATACTACGACGAGTCGTTGGACTACAAGAAGGCAGCTGGAGGAGTTGTGGGTCCAGCAGCAGCTTCAGGTGGTGAAGGGGTGAACATGCAGCCTTTCATGGAGGCTCTGTCGGAAGCAGCTGCGGTCCAGTGCATGACAGCCCCCTCAGCGGCTTAG

Protein Analysis

364

Amino Acids

40.88

Weight (kDa)

6.2

Isoelectric Point (pI)

41.01

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Glyco_transf_8 PF01501 28 - 110 5.3e-07 Glycosyl transferase family 8
Glyco_transf_8 PF01501 148 - 291 4.2e-16 Glycosyl transferase family 8
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0016492)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G47180
fragaria_vesca FvH4_1g26560
malus_domestica MD09G1288100.v1.1 MD17G1280400.v1.1
prunus_persica Prupe.3G005100_v2.0.a1
pyrus_communis pycom09g19550 pycom17g27830
rosa_chinensis RchiOBHm_Chr3g0486641
rosa_laevigata RLG00000023070
rosa_multiflora Rmu_sc0000261.1_g000006
rosa_rugosa Rorug03G0226200
rosa_samantha Rh3AG275700 Rh3DG306800
rosa_wichuraiana Rw3G024570

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 192
AccB7I CCANNNNNTGG 1 cut(s) 807
AccI GTMKAC 1 cut(s) 869
AccII CGCG 1 cut(s) 641
AccIII TCCGGA 1 cut(s) 753
AclWI GGATC 1 cut(s) 859
AcoI YGGCCR 3 cut(s) 90, 129, 798
AcuI CTGAAG 2 cut(s) 390, 984
AcyI GRCGYC 3 cut(s) 117, 189, 811
AfaI GTAC 4 cut(s) 161, 420, 458, 566
AfiI CCNNNNNNNGG 5 cut(s) 37, 38, 586, 807, 1084
AgsI TTSAA 4 cut(s) 218, 380, 399, 637
AjnI CCWGG 1 cut(s) 795
AjuI GAANNNNNNNTTGG 2 cut(s) 26, 58
AluBI AGCT 6 cut(s) 316, 610, 832, 971, 998, 1055
AluI AGCT 6 cut(s) 316, 610, 832, 971, 998, 1055
Alw21I GWGCWC 1 cut(s) 204
Alw26I GTCTC 1 cut(s) 665
AlwI GGATC 1 cut(s) 859
Ama87I CYCGRG 2 cut(s) 263, 668
Aor13HI TCCGGA 1 cut(s) 753
AoxI GGCC 6 cut(s) 90, 129, 288, 613, 664, 798
ApeKI GCWGC 8 cut(s) 316, 360, 968, 992, 995, 1024, 1052, 1055
ArsI GACNNNNNNTTYG 4 cut(s) 461, 493, 831, 863
Asp700I GAANNNNTTC 1 cut(s) 375
AspS9I GGNCC 6 cut(s) 589, 614, 705, 793, 986, 1060
AsuC2I CCSGG 4 cut(s) 194, 581, 663, 818
AsuHPI GGTGA 3 cut(s) 806, 1019, 1027
AvaI CYCGRG 2 cut(s) 263, 668
AvaII GGWCC 5 cut(s) 589, 705, 793, 986, 1060
BaeGI GKGCMC 1 cut(s) 581
BalI TGGCCA 2 cut(s) 131, 800
BanII GRGCYC 1 cut(s) 663
BarI GAAGNNNNNNTAC 2 cut(s) 417, 449
Bbv12I GWGCWC 1 cut(s) 204
BbvCI CCTCAGC 1 cut(s) 1081
BbvI GCAGC 8 cut(s) 303, 347, 980, 1004, 1007, 1036, 1042, 1064
BccI CCATC 3 cut(s) 357, 485, 505
BceAI ACGGC 4 cut(s) 115, 491, 607, 844
BciT130I CCWGG 1 cut(s) 797
BcnI CCSGG 4 cut(s) 194, 581, 663, 818
BcoDI GTCTC 1 cut(s) 665
BfaI CTAG 2 cut(s) 833, 914
Bme1390I CCNGG 5 cut(s) 194, 581, 663, 797, 818
Bme18I GGWCC 5 cut(s) 589, 705, 793, 986, 1060
BmeT110I CYCGRG 2 cut(s) 263, 668
BmgT120I GGNCC 6 cut(s) 589, 614, 705, 793, 986, 1060
BmiI GGNNCC 4 cut(s) 6, 706, 707, 987
BmrFI CCNGG 5 cut(s) 194, 581, 663, 797, 818
BmrI ACTGGG 1 cut(s) 271
BmsI GCATC 2 cut(s) 240, 900
BmuI ACTGGG 1 cut(s) 271
BpmI CTGGAG 1 cut(s) 993
Bpu10I CCTNAGC 1 cut(s) 1081
BpuMI CCSGG 4 cut(s) 194, 581, 663, 818
BsaAI YACGTR 2 cut(s) 79, 109
BsaHI GRCGYC 3 cut(s) 117, 189, 811
BsaI GGTCTC 1 cut(s) 665
BsaJI CCNNGG 3 cut(s) 132, 285, 860
BsaWI WCCGGW 1 cut(s) 753
BsaXI ACNNNNNCTCC 4 cut(s) 966, 996, 1028, 1058
Bsc4I CCNNNNNNNGG 5 cut(s) 37, 38, 586, 807, 1084
Bse118I RCCGGY 1 cut(s) 92
Bse1I ACTGG 3 cut(s) 277, 592, 1063
BseAI TCCGGA 1 cut(s) 753
BseBI CCWGG 1 cut(s) 797
BseDI CCNNGG 3 cut(s) 132, 285, 860
BseGI GGATG 1 cut(s) 15
BseLI CCNNNNNNNGG 5 cut(s) 37, 38, 586, 807, 1084
BseMII CTCAG 1 cut(s) 712
BseNI ACTGG 3 cut(s) 277, 592, 1063
BseRI GAGGAG 3 cut(s) 212, 896, 990
BseSI GKGCMC 1 cut(s) 581
BseXI GCAGC 8 cut(s) 303, 347, 980, 1004, 1007, 1036, 1042, 1064
Bsh1236I CGCG 1 cut(s) 641
BshFI GGCC 6 cut(s) 92, 131, 290, 615, 666, 800
BsiHKAI GWGCWC 1 cut(s) 204
BsiHKCI CYCGRG 2 cut(s) 263, 668
BsiSI CCGG 6 cut(s) 93, 194, 581, 663, 754, 818
BslFI GGGAC 4 cut(s) 14, 176, 458, 718
BslI CCNNNNNNNGG 5 cut(s) 37, 38, 586, 807, 1084
BsmAI GTCTC 1 cut(s) 665
BsmFI GGGAC 4 cut(s) 14, 176, 458, 718
BsmI GAATGC 1 cut(s) 210
BsnI GGCC 6 cut(s) 92, 131, 290, 615, 666, 800
Bso31I GGTCTC 1 cut(s) 665
BsoBI CYCGRG 2 cut(s) 263, 668
Bsp1286I GDGCHC 3 cut(s) 204, 581, 663
Bsp13I TCCGGA 1 cut(s) 753
Bsp143I GATC 2 cut(s) 243, 851
Bsp19I CCATGG 1 cut(s) 285
BspANI GGCC 6 cut(s) 92, 131, 290, 615, 666, 800
BspCNI CTCAG 1 cut(s) 711
BspEI TCCGGA 1 cut(s) 753
BspFNI CGCG 1 cut(s) 641
BspLI GGNNCC 4 cut(s) 6, 706, 707, 987
BspPI GGATC 1 cut(s) 859
BspTNI GGTCTC 1 cut(s) 665
BsrFI RCCGGY 1 cut(s) 92
BsrI ACTGG 3 cut(s) 277, 592, 1063
BssAI RCCGGY 1 cut(s) 92
BssECI CCNNGG 3 cut(s) 132, 285, 860
BssMI GATC 2 cut(s) 243, 851
BssNAI GTATAC 1 cut(s) 870
BssNI GRCGYC 3 cut(s) 117, 189, 811
BssT1I CCWWGG 2 cut(s) 132, 285
Bst1107I GTATAC 1 cut(s) 870
Bst2UI CCWGG 1 cut(s) 797
Bst4CI ACNGT 1 cut(s) 385
BstACI GRCGYC 3 cut(s) 117, 189, 811
BstBAI YACGTR 2 cut(s) 79, 109
BstC8I GCNNGC 3 cut(s) 94, 572, 643
BstDEI CTNAG 3 cut(s) 698, 1081, 1089
BstDSI CCRYGG 2 cut(s) 285, 860
BstF5I GGATG 1 cut(s) 15
BstFNI CGCG 1 cut(s) 641
BstKTI GATC 2 cut(s) 246, 854
BstMAI GTCTC 1 cut(s) 665
BstMBI GATC 2 cut(s) 243, 851
BstMWI GCNNNNNNNGC 2 cut(s) 576, 1082
BstNI CCWGG 1 cut(s) 797
BstNSI RCATGY 3 cut(s) 649, 892, 1024
BstSCI CCNGG 5 cut(s) 192, 579, 661, 795, 816
BstSLI GKGCMC 1 cut(s) 581
BstUI CGCG 1 cut(s) 641
BstV1I GCAGC 8 cut(s) 303, 347, 980, 1004, 1007, 1036, 1042, 1064
BstXI CCANNNNNNTGG 1 cut(s) 356
BstZ17I GTATAC 1 cut(s) 870
BsuRI GGCC 6 cut(s) 92, 131, 290, 615, 666, 800
BtgI CCRYGG 2 cut(s) 285, 860
BtsCI GGATG 1 cut(s) 15
BtsI GCAGTG 1 cut(s) 581
BtsIMutI CAGTG 4 cut(s) 390, 581, 599, 1070
Cac8I GCNNGC 3 cut(s) 94, 572, 643
Cfr10I RCCGGY 1 cut(s) 92
Cfr13I GGNCC 6 cut(s) 589, 614, 705, 793, 986, 1060
CseI GACGC 3 cut(s) 16, 106, 800
Csp6I GTAC 4 cut(s) 160, 419, 457, 565
CviAII CATG 8 cut(s) 286, 646, 680, 802, 889, 1021, 1033, 1069
CviQI GTAC 4 cut(s) 160, 419, 457, 565
DdeI CTNAG 3 cut(s) 698, 1081, 1089
DpnI GATC 2 cut(s) 245, 853
DpnII GATC 2 cut(s) 243, 851
EaeI YGGCCR 3 cut(s) 90, 129, 798
Eco130I CCWWGG 2 cut(s) 132, 285
Eco24I GRGCYC 1 cut(s) 663
Eco31I GGTCTC 1 cut(s) 665
Eco47I GGWCC 5 cut(s) 589, 705, 793, 986, 1060
Eco57I CTGAAG 2 cut(s) 390, 984
Eco88I CYCGRG 2 cut(s) 263, 668
EcoO109I RGGNCCY 1 cut(s) 705
EcoRII CCWGG 1 cut(s) 795
EcoT14I CCWWGG 2 cut(s) 132, 285
EcoT38I GRGCYC 1 cut(s) 663
ErhI CCWWGG 2 cut(s) 132, 285
FaeI CATG 8 cut(s) 289, 649, 683, 805, 892, 1024, 1036, 1072
FaqI GGGAC 4 cut(s) 14, 176, 458, 718
FatI CATG 8 cut(s) 285, 645, 679, 801, 888, 1020, 1032, 1068
FauI CCCGC 1 cut(s) 634
FblI GTMKAC 1 cut(s) 869
FokI GGATG 1 cut(s) 2
FriOI GRGCYC 1 cut(s) 663
FspBI CTAG 2 cut(s) 833, 914
GsuI CTGGAG 1 cut(s) 993
HaeIII GGCC 6 cut(s) 92, 131, 290, 615, 666, 800
HapII CCGG 6 cut(s) 93, 194, 581, 663, 754, 818
HgaI GACGC 3 cut(s) 16, 106, 800
Hin1I GRCGYC 3 cut(s) 117, 189, 811
Hin1II CATG 8 cut(s) 289, 649, 683, 805, 892, 1024, 1036, 1072
HinfI GANTC 4 cut(s) 67, 538, 694, 947
HpaII CCGG 6 cut(s) 93, 194, 581, 663, 754, 818
HphI GGTGA 3 cut(s) 806, 1019, 1027
Hpy166II GTNNAC 5 cut(s) 256, 457, 784, 870, 1018
Hpy188I TCNGA 5 cut(s) 607, 701, 714, 851, 1048
Hpy188III TCNNGA 3 cut(s) 8, 670, 754
Hpy8I GTNNAC 5 cut(s) 256, 457, 784, 870, 1018
Hpy99I CGWCG 5 cut(s) 122, 125, 191, 628, 947
HpyAV CCTTC 7 cut(s) 106, 139, 365, 580, 871, 958, 1004
HpyCH4III ACNGT 1 cut(s) 385
HpyCH4IV ACGT 5 cut(s) 78, 108, 189, 297, 533
HpyCH4V TGCA 6 cut(s) 176, 231, 725, 892, 1024, 1068
HpyF10VI GCNNNNNNNGC 2 cut(s) 576, 1082
HpyF3I CTNAG 3 cut(s) 698, 1081, 1089
HpySE526I ACGT 5 cut(s) 78, 108, 189, 297, 533
Hsp92I GRCGYC 3 cut(s) 117, 189, 811
Hsp92II CATG 8 cut(s) 289, 649, 683, 805, 892, 1024, 1036, 1072
KflI GGGWCCC 1 cut(s) 705
Kpn2I TCCGGA 1 cut(s) 753
KroI GCCGGC 1 cut(s) 92
KroNI GCCGGC 1 cut(s) 94
Kzo9I GATC 2 cut(s) 243, 851
LmnI GCTCC 4 cut(s) 10, 199, 607, 829
Lsp1109I GCAGC 8 cut(s) 303, 347, 980, 1004, 1007, 1036, 1042, 1064
LweI GCATC 2 cut(s) 240, 900
MaeI CTAG 2 cut(s) 833, 914
MaeII ACGT 5 cut(s) 78, 108, 189, 297, 533
MaeIII GTNAC 3 cut(s) 79, 539, 812
MalI GATC 2 cut(s) 245, 853
MboI GATC 2 cut(s) 243, 851
MboII GAAGA 3 cut(s) 206, 437, 931
MhlI GDGCHC 3 cut(s) 204, 581, 663
MlsI TGGCCA 2 cut(s) 131, 800
MluCI AATT 3 cut(s) 35, 771, 787
MluNI TGGCCA 2 cut(s) 131, 800
MlyI GAGTC 4 cut(s) 76, 547, 688, 956
MmeI TCCRAC 4 cut(s) 737, 829, 933, 1026
Mox20I TGGCCA 2 cut(s) 131, 800
MroI TCCGGA 1 cut(s) 753
MroNI GCCGGC 1 cut(s) 92
MroXI GAANNNNTTC 1 cut(s) 375
MscI TGGCCA 2 cut(s) 131, 800
MseI TTAA 2 cut(s) 740, 906
MslI CAYNNNNRTG 3 cut(s) 452, 650, 908
Msp20I TGGCCA 2 cut(s) 131, 800
MspA1I CMGCKG 3 cut(s) 971, 1055, 1085
MspI CCGG 6 cut(s) 93, 194, 581, 663, 754, 818
MspR9I CCNGG 5 cut(s) 194, 581, 663, 797, 818
Mva1269I GAATGC 1 cut(s) 210
MvaI CCWGG 1 cut(s) 797
MvnI CGCG 1 cut(s) 641
MwoI GCNNNNNNNGC 2 cut(s) 576, 1082
NaeI GCCGGC 1 cut(s) 94
NciI CCSGG 4 cut(s) 194, 581, 663, 818
NcoI CCATGG 1 cut(s) 285
NdeII GATC 2 cut(s) 243, 851
NgoMIV GCCGGC 1 cut(s) 92
NlaIII CATG 8 cut(s) 289, 649, 683, 805, 892, 1024, 1036, 1072
NlaIV GGNNCC 4 cut(s) 6, 706, 707, 987
NmeAIII GCCGAG 1 cut(s) 90
NmuCI GTSAC 3 cut(s) 79, 539, 812
NspI RCATGY 3 cut(s) 649, 892, 1024
PaeR7I CTCGAG 1 cut(s) 668
PcsI WCGNNNNNNNCGW 2 cut(s) 105, 114
PctI GAATGC 1 cut(s) 210
PdiI GCCGGC 1 cut(s) 94
PdmI GAANNNNTTC 1 cut(s) 375
PflFI GACNNNGTC 1 cut(s) 839
PflMI CCANNNNNTGG 1 cut(s) 807
PfoI TCCNGGA 1 cut(s) 192
PleI GAGTC 4 cut(s) 75, 546, 688, 955
PpsI GAGTC 4 cut(s) 75, 546, 688, 955
Ppu21I YACGTR 2 cut(s) 79, 109
PpuMI RGGWCCY 1 cut(s) 705
Psp5II RGGWCCY 1 cut(s) 705
Psp6I CCWGG 1 cut(s) 795
PspGI CCWGG 1 cut(s) 795
PspN4I GGNNCC 4 cut(s) 6, 706, 707, 987
PspPI GGNCC 6 cut(s) 589, 614, 705, 793, 986, 1060
PspPPI RGGWCCY 1 cut(s) 705
PsyI GACNNNGTC 1 cut(s) 839
PvuII CAGCTG 2 cut(s) 971, 1055
RsaI GTAC 4 cut(s) 161, 420, 458, 566
RsaNI GTAC 4 cut(s) 160, 419, 457, 565
RseI CAYNNNNRTG 3 cut(s) 452, 650, 908
SaqAI TTAA 2 cut(s) 740, 906
Sau3AI GATC 2 cut(s) 243, 851
Sau96I GGNCC 6 cut(s) 589, 614, 705, 793, 986, 1060
SchI GAGTC 4 cut(s) 76, 547, 688, 956
ScrFI CCNGG 5 cut(s) 194, 581, 663, 797, 818
SduI GDGCHC 3 cut(s) 204, 581, 663
SfaNI GCATC 2 cut(s) 240, 900
Sfr274I CTCGAG 1 cut(s) 668
SinI GGWCC 5 cut(s) 589, 705, 793, 986, 1060
SlaI CTCGAG 1 cut(s) 668
SmiMI CAYNNNNRTG 3 cut(s) 452, 650, 908
SmlI CTYRAG 1 cut(s) 668
SmoI CTYRAG 1 cut(s) 668
Sse9I AATT 3 cut(s) 35, 771, 787
SspMI CTAG 2 cut(s) 833, 914
StyD4I CCNGG 5 cut(s) 192, 579, 661, 795, 816
StyI CCWWGG 2 cut(s) 132, 285
TaaI ACNGT 1 cut(s) 385
TaiI ACGT 5 cut(s) 81, 111, 192, 300, 536
TaqI TCGA 5 cut(s) 246, 311, 657, 669, 854
TasI AATT 3 cut(s) 35, 771, 787
TauI GCSGC 4 cut(s) 158, 210, 550, 1088
Tru1I TTAA 2 cut(s) 740, 906
Tru9I TTAA 2 cut(s) 740, 906
TscAI CASTG 4 cut(s) 390, 581, 599, 1070
TseFI GTSAC 3 cut(s) 79, 539, 812
TseI GCWGC 8 cut(s) 316, 360, 968, 992, 995, 1024, 1052, 1055
Tsp45I GTSAC 3 cut(s) 79, 539, 812
TspDTI ATGAA 1 cut(s) 1021
TspGWI ACGGA 1 cut(s) 227
TspRI CASTG 4 cut(s) 390, 581, 599, 1070
Tth111I GACNNNGTC 1 cut(s) 839
Van91I CCANNNNNTGG 1 cut(s) 807
VpaK11BI GGWCC 5 cut(s) 589, 705, 793, 986, 1060
XceI RCATGY 3 cut(s) 649, 892, 1024
XhoI CTCGAG 1 cut(s) 668
XmiI GTMKAC 1 cut(s) 869
XmnI GAANNNNTTC 1 cut(s) 375
XspI CTAG 2 cut(s) 833, 914
ZraI GACGTC 1 cut(s) 190
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.