Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000003

Orthogroup ID

OG0016492

Physical Location & Seq

Genomic Coordinates Reverse (-)

20769930 .. 20772360

Gene Structure 2431 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug03G0226200.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1386 bp

ATGAAGGCAAAGGGCCAAGACCCGCTGCCCAAACCCTACGTTCCCAAACCCTTGCCGACCGGATCTGGAACCTCCAAGAAGCCGTCCACCACCCCCTCGTCAGTCCGGTGGCCTCCCCAGGCAGGGGGCCATAGCAACCATCGCACCGCCTATCAAAACTGCTCACTGCAACTATCTAGCCCTGCAAACACAAACCAAAGCCTTAGTGGACGTCTCCTCCTCGCCGAGCCGCCCGAAGAAGGTCCGCAAGGATCCGAGCCGCCTTCAACTGAACGTCGCAGGTCGTTACGCGCCCTGACAAAACAATCCGAACCGACACCGTCTTCAACCCAACAGCACCGCCTCAGAGGAGACTGTTGTGCCACAGTACGACGATGGAACCAGATCTGCAAACTCCAACCCCAGCACCAAACAGCCCGATCCTATCACAAGTCCGACGCCTCCACCAACAAGCCTGCTACGTTCACCGAAAGAAAACGACGCCGGAAGCGCCCTATAGCGTGCAGAAAACCCTCGGGTCGCCGCCGCCCTGCTACACGAAACCCTCGGTTTCGCTTTCCATTGCCTATTTCACCACTTGGTAAAGTTACAGAAGCAACCATGTCTGGGTTCAAAAGCCAAAGGTGGTCTCTTAAGGGTATGACTGCACTCGTCACCGGTGGAACTAGAGGCATTGGATATGCCATTGTCGAAGAACTAGCAGGACTTGGGGCAACAGTGCATACCTGTGCTCGTAACAGGGAAATGATCGATGAGAGGGTTCGAGAGTGGAAGATTAAGGGATTTACCGTGAGTGGTTCAGTTTGTGACCTCACATCTAAATCTCAAAGGGAGGAGCTCATAAAGACTGTCTCATCTGTTTTTGAAGGCAAGCTTAGCATCCTTGTAAATAATGCTGCAATAGTCACACTCAGAGGAGCTACAGATTATAGTTTAGAAGATTTCTCAAGTATGATGAGCAGCAATGTTGAATCTCCCTACCATCTTTGTCAACTAGCACATCCTCTTCTGAAGGCATCAGGAAATGGAAGCATTATATTTGTCTCCTCTATTGCTGGTATAATAGCTCTGCCTAAACTCTCTGCCTATGCAGCAACCAAAGGAGCTATCATCCAGATTTCAAAGAATTTGGCATGTGAATGGGCAAAAGACAACATTCGGACAAATACTGTAGCACCATGGGCAGTCAACACTGGGGCAGCAGCAGTTGAACCGGATGAGCACCGTGATGATTTCAGAAGGCTAATAGCTCGAACTCCCATTCGTCGCCTTGCAGACCCTAATGAAATTTCATCTCTGGTGACTTTTCTTTGCCTCCCAGCTGCTTCTTACATCAATGGACAAGTTGTTAGCATTGATGGAGGATTTACAGTTGGTGGTTTCTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000271 GO:0000302 GO:0001101 GO:0003674 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0005975 GO:0005976 GO:0005977 GO:0005978 GO:0005996 GO:0006012 GO:0006073 GO:0006091 GO:0006112 GO:0006950 GO:0006970 GO:0006979 GO:0008150 GO:0008152 GO:0008194 GO:0008378 GO:0008466 GO:0009058 GO:0009059 GO:0009250 GO:0009266 GO:0009314 GO:0009408 GO:0009409 GO:0009414 GO:0009415 GO:0009416 GO:0009628 GO:0009636 GO:0009642 GO:0009644 GO:0009651 GO:0009719 GO:0009725 GO:0009737 GO:0009987 GO:0010033 GO:0010035 GO:0015980 GO:0016051 GO:0016740 GO:0016757 GO:0016758 GO:0019318 GO:0033692 GO:0033993 GO:0034637 GO:0034645 GO:0035250 GO:0035251 GO:0042221 GO:0042493 GO:0042542 GO:0043170 GO:0044042 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044262 GO:0044264 GO:0044281 GO:0044424 GO:0044444 GO:0044464 GO:0046527 GO:0046677 GO:0047216 GO:0050896 GO:0055114 GO:0071704 GO:0097305 GO:1901576 GO:1901700

KEGG Pathways

Metabolic & Signaling

ko00052 map00052

Pfam Domains

Protein Families

Glyco_transf_8

Protein Analysis

461

Amino Acids

50.29

Weight (kDa)

10.11

Isoelectric Point (pI)

56.39

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
adh_short	PF00106	215 - 402	3.6e-46	short chain dehydrogenase
KR	PF08659	215 - 367	9.3e-13	KR domain
adh_short_C2	PF13561	223 - 457	3.5e-54	Enoyl-(Acyl carrier protein) reductase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Orthologous Genes (Group: OG0016492)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G47180
fragaria_vesca	FvH4_1g26560
malus_domestica	MD09G1288100.v1.1 MD17G1280400.v1.1
prunus_persica	Prupe.3G005100_v2.0.a1
pyrus_communis	pycom09g19550 pycom17g27830
rosa_chinensis	RchiOBHm_Chr3g0486641
rosa_laevigata	RLG00000023070
rosa_multiflora	Rmu_sc0000261.1_g000006
rosa_rugosa	Rorug03G0226200
rosa_samantha	Rh3AG275700 Rh3DG306800
rosa_wichuraiana	Rw3G024570

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	1 cut(s)	214
Acc36I	ACCTGC	1 cut(s)	270
AccII	CGCG	1 cut(s)	291
AciI	CCGC	8 cut(s)	23, 147, 230, 245, 260, 340, 523, 526
AclWI	GGATC	4 cut(s)	70, 246, 259, 414
AcsI	RAATTY	2 cut(s)	1126, 1287
AcuI	CTGAAG	1 cut(s)	1031
AcyI	GRCGYC	3 cut(s)	211, 438, 481
AfaI	GTAC	1 cut(s)	369
AfiI	CCNNNNNNNGG	5 cut(s)	122, 123, 124, 239, 606
AflII	CTTAAG	1 cut(s)	632
AgeI	ACCGGT	1 cut(s)	656
AgsI	TTSAA	7 cut(s)	267, 327, 613, 866, 971, 1122, 1211
AjnI	CCWGG	1 cut(s)	117
AluBI	AGCT	7 cut(s)	838, 874, 920, 1067, 1106, 1250, 1322
AluI	AGCT	7 cut(s)	838, 874, 920, 1067, 1106, 1250, 1322
Alw21I	GWGCWC	3 cut(s)	733, 840, 1224
Alw26I	GTCTC	5 cut(s)	218, 345, 633, 856, 1048
AlwI	GGATC	4 cut(s)	70, 246, 259, 414
Ama87I	CYCGRG	1 cut(s)	514
AoxI	GGCC	3 cut(s)	13, 110, 127
ApeKI	GCWGC	7 cut(s)	25, 896, 960, 1091, 1199, 1202, 1322
ApoI	RAATTY	2 cut(s)	1126, 1287
AsiGI	ACCGGT	1 cut(s)	656
AspLEI	GCGC	2 cut(s)	293, 492
AspS9I	GGNCC	3 cut(s)	13, 127, 242
AsuHPI	GGTGA	4 cut(s)	457, 564, 646, 1312
AvaI	CYCGRG	1 cut(s)	514
AvaII	GGWCC	1 cut(s)	242
BamHI	GGATCC	1 cut(s)	251
BanII	GRGCYC	1 cut(s)	840
BbsI	GAAGAC	1 cut(s)	315
Bbv12I	GWGCWC	3 cut(s)	733, 840, 1224
BbvI	GCAGC	7 cut(s)	12, 883, 972, 1103, 1211, 1214, 1309
BccI	CCATC	4 cut(s)	147, 369, 990, 1352
BceAI	ACGGC	1 cut(s)	67
BciT130I	CCWGG	1 cut(s)	119
BcoDI	GTCTC	5 cut(s)	218, 345, 633, 856, 1048
BfaI	CTAG	5 cut(s)	177, 666, 698, 995, 1384
BfmI	CTRYAG	3 cut(s)	495, 921, 1170
BfoI	RGCGCY	1 cut(s)	493
BfrI	CTTAAG	1 cut(s)	632
BfuAI	ACCTGC	1 cut(s)	270
BglII	AGATCT	1 cut(s)	384
BlpI	GCTNAGC	1 cut(s)	875
Bme1390I	CCNGG	1 cut(s)	119
Bme18I	GGWCC	1 cut(s)	242
BmeT110I	CYCGRG	1 cut(s)	514
BmgT120I	GGNCC	3 cut(s)	13, 127, 242
BmiI	GGNNCC	4 cut(s)	70, 128, 253, 380
BmrFI	CCNGG	1 cut(s)	119
BmrI	ACTGGG	1 cut(s)	1203
BmsI	GCATC	2 cut(s)	888, 1025
BmuI	ACTGGG	1 cut(s)	1203
BpiI	GAAGAC	1 cut(s)	315
Bpu1102I	GCTNAGC	1 cut(s)	875
BpuEI	CTTGAG	1 cut(s)	931
Bsa29I	ATCGAT	1 cut(s)	750
BsaHI	GRCGYC	3 cut(s)	211, 438, 481
BsaI	GGTCTC	1 cut(s)	633
BsaJI	CCNNGG	4 cut(s)	117, 513, 545, 1178
BsaWI	WCCGGW	4 cut(s)	59, 105, 656, 1213
BsaXI	ACNNNNNCTCC	2 cut(s)	201, 231
Bsc4I	CCNNNNNNNGG	5 cut(s)	122, 123, 124, 239, 606
Bse118I	RCCGGY	1 cut(s)	656
Bse1I	ACTGG	1 cut(s)	1198
Bse3DI	GCAATG	2 cut(s)	560, 970
BseBI	CCWGG	1 cut(s)	119
BseCI	ATCGAT	1 cut(s)	750
BseDI	CCNNGG	4 cut(s)	117, 513, 545, 1178
BseGI	GGATG	4 cut(s)	879, 1000, 1110, 1222
BseLI	CCNNNNNNNGG	5 cut(s)	122, 123, 124, 239, 606
BseMI	GCAATG	2 cut(s)	560, 970
BseMII	CTCAG	2 cut(s)	358, 925
BseNI	ACTGG	1 cut(s)	1198
BseRI	GAGGAG	6 cut(s)	206, 209, 363, 848, 930, 1036
BseXI	GCAGC	7 cut(s)	12, 883, 972, 1103, 1211, 1214, 1309
BseYI	CCCAGC	2 cut(s)	402, 1318
BsgI	GTGCAG	2 cut(s)	523, 630
Bsh1236I	CGCG	1 cut(s)	291
Bsh1285I	CGRYCG	1 cut(s)	60
BshFI	GGCC	3 cut(s)	15, 112, 129
BshTI	ACCGGT	1 cut(s)	656
BshVI	ATCGAT	1 cut(s)	750
BsiEI	CGRYCG	1 cut(s)	60
BsiHKAI	GWGCWC	3 cut(s)	733, 840, 1224
BsiHKCI	CYCGRG	1 cut(s)	514
BsiSI	CCGG	5 cut(s)	60, 106, 484, 657, 1214
BslI	CCNNNNNNNGG	5 cut(s)	122, 123, 124, 239, 606
BsmAI	GTCTC	5 cut(s)	218, 345, 633, 856, 1048
BsmBI	CGTCTC	1 cut(s)	218
BsnI	GGCC	3 cut(s)	15, 112, 129
Bso31I	GGTCTC	1 cut(s)	633
BsoBI	CYCGRG	1 cut(s)	514
Bsp1286I	GDGCHC	3 cut(s)	733, 840, 1224
Bsp143I	GATC	5 cut(s)	62, 251, 384, 419, 747
Bsp1720I	GCTNAGC	1 cut(s)	875
Bsp19I	CCATGG	1 cut(s)	1178
BspACI	CCGC	8 cut(s)	23, 147, 230, 245, 260, 340, 523, 526
BspANI	GGCC	3 cut(s)	15, 112, 129
BspCNI	CTCAG	2 cut(s)	357, 924
BspDI	ATCGAT	1 cut(s)	750
BspFNI	CGCG	1 cut(s)	291
BspLI	GGNNCC	4 cut(s)	70, 128, 253, 380
BspMI	ACCTGC	1 cut(s)	270
BspPI	GGATC	4 cut(s)	70, 246, 259, 414
BspTI	CTTAAG	1 cut(s)	632
BspTNI	GGTCTC	1 cut(s)	633
BsrDI	GCAATG	2 cut(s)	560, 970
BsrFI	RCCGGY	1 cut(s)	656
BsrI	ACTGG	1 cut(s)	1198
BssAI	RCCGGY	1 cut(s)	656
BssECI	CCNNGG	4 cut(s)	117, 513, 545, 1178
BssMI	GATC	5 cut(s)	62, 251, 384, 419, 747
BssNI	GRCGYC	3 cut(s)	211, 438, 481
BssT1I	CCWWGG	1 cut(s)	1178
Bst2UI	CCWGG	1 cut(s)	119
Bst4CI	ACNGT	9 cut(s)	321, 356, 367, 718, 790, 850, 1171, 1226, 1372
Bst6I	CTCTTC	1 cut(s)	1011
BstACI	GRCGYC	3 cut(s)	211, 438, 481
BstAFI	CTTAAG	1 cut(s)	632
BstC8I	GCNNGC	3 cut(s)	456, 502, 872
BstDEI	CTNAG	4 cut(s)	203, 344, 875, 911
BstDSI	CCRYGG	1 cut(s)	1178
BstF5I	GGATG	4 cut(s)	879, 1000, 1110, 1222
BstFNI	CGCG	1 cut(s)	291
BstH2I	RGCGCY	1 cut(s)	493
BstHHI	GCGC	2 cut(s)	293, 492
BstKTI	GATC	5 cut(s)	65, 254, 387, 422, 750
BstMAI	GTCTC	5 cut(s)	218, 345, 633, 856, 1048
BstMBI	GATC	5 cut(s)	62, 251, 384, 419, 747
BstMCI	CGRYCG	1 cut(s)	60
BstMWI	GCNNNNNNNGC	5 cut(s)	141, 489, 876, 1091, 1181
BstNI	CCWGG	1 cut(s)	119
BstNSI	RCATGY	1 cut(s)	1137
BstSCI	CCNGG	1 cut(s)	117
BstSFI	CTRYAG	3 cut(s)	495, 921, 1170
BstUI	CGCG	1 cut(s)	291
BstV1I	GCAGC	7 cut(s)	12, 883, 972, 1103, 1211, 1214, 1309
BstV2I	GAAGAC	1 cut(s)	315
BstX2I	RGATCY	3 cut(s)	62, 251, 384
BstYI	RGATCY	3 cut(s)	62, 251, 384
Bsu15I	ATCGAT	1 cut(s)	750
BsuRI	GGCC	3 cut(s)	15, 112, 129
BsuTUI	ATCGAT	1 cut(s)	750
BtgI	CCRYGG	1 cut(s)	1178
BtgZI	GCGATG	1 cut(s)	125
BtsCI	GGATG	4 cut(s)	879, 1000, 1110, 1222
BtsI	GCAGTG	1 cut(s)	164
BtsIMutI	CAGTG	3 cut(s)	164, 723, 1191
BveI	ACCTGC	1 cut(s)	270
Cac8I	GCNNGC	3 cut(s)	456, 502, 872
CfoI	GCGC	2 cut(s)	293, 492
Cfr10I	RCCGGY	1 cut(s)	656
Cfr13I	GGNCC	3 cut(s)	13, 127, 242
ClaI	ATCGAT	1 cut(s)	750
CseI	GACGC	2 cut(s)	446, 489
Csp6I	GTAC	1 cut(s)	368
CspAI	ACCGGT	1 cut(s)	656
CviAII	CATG	3 cut(s)	601, 1134, 1179
CviQI	GTAC	1 cut(s)	368
DdeI	CTNAG	4 cut(s)	203, 344, 875, 911
DpnI	GATC	5 cut(s)	64, 253, 386, 421, 749
DpnII	GATC	5 cut(s)	62, 251, 384, 419, 747
Eam1104I	CTCTTC	1 cut(s)	1011
EarI	CTCTTC	1 cut(s)	1011
Ecl136II	GAGCTC	1 cut(s)	838
Eco130I	CCWWGG	1 cut(s)	1178
Eco24I	GRGCYC	1 cut(s)	840
Eco31I	GGTCTC	1 cut(s)	633
Eco47I	GGWCC	1 cut(s)	242
Eco53kI	GAGCTC	1 cut(s)	838
Eco57I	CTGAAG	1 cut(s)	1031
Eco88I	CYCGRG	1 cut(s)	514
EcoICRI	GAGCTC	1 cut(s)	838
EcoRII	CCWGG	1 cut(s)	117
EcoT14I	CCWWGG	1 cut(s)	1178
EcoT38I	GRGCYC	1 cut(s)	840
ErhI	CCWWGG	1 cut(s)	1178
Esp3I	CGTCTC	1 cut(s)	218
FaeI	CATG	3 cut(s)	604, 1137, 1182
FalI	AAGNNNNNCTT	2 cut(s)	858, 890
FatI	CATG	3 cut(s)	600, 1133, 1178
FauI	CCCGC	1 cut(s)	30
FokI	GGATG	4 cut(s)	866, 987, 1097, 1229
FriOI	GRGCYC	1 cut(s)	840
FspBI	CTAG	5 cut(s)	177, 666, 698, 995, 1384
GlaI	GCGC	2 cut(s)	292, 491
GsaI	CCCAGC	2 cut(s)	406, 1322
HaeII	RGCGCY	1 cut(s)	493
HaeIII	GGCC	3 cut(s)	15, 112, 129
HapII	CCGG	5 cut(s)	60, 106, 484, 657, 1214
HgaI	GACGC	2 cut(s)	446, 489
HhaI	GCGC	2 cut(s)	293, 492
Hin1I	GRCGYC	3 cut(s)	211, 438, 481
Hin1II	CATG	3 cut(s)	604, 1137, 1182
Hin6I	GCGC	2 cut(s)	291, 490
HinP1I	GCGC	2 cut(s)	291, 490
HincII	GTYRAC	2 cut(s)	992, 1189
HindII	GTYRAC	2 cut(s)	992, 1189
HindIII	AAGCTT	1 cut(s)	872
HinfI	GANTC	1 cut(s)	971
HpaII	CCGG	5 cut(s)	60, 106, 484, 657, 1214
HphI	GGTGA	4 cut(s)	457, 564, 646, 1312
Hpy166II	GTNNAC	5 cut(s)	87, 209, 465, 992, 1189
Hpy188I	TCNGA	8 cut(s)	256, 310, 347, 436, 914, 1011, 1161, 1238
Hpy188III	TCNNGA	4 cut(s)	66, 764, 1020, 1114
Hpy8I	GTNNAC	5 cut(s)	87, 209, 465, 992, 1189
Hpy99I	CGWCG	5 cut(s)	279, 375, 440, 483, 1269
HpyAV	CCTTC	5 cut(s)	233, 273, 860, 1006, 1233
HpyCH4III	ACNGT	9 cut(s)	321, 356, 367, 718, 790, 850, 1171, 1226, 1372
HpyCH4IV	ACGT	4 cut(s)	39, 211, 274, 461
HpyCH4V	TGCA	9 cut(s)	169, 185, 390, 504, 647, 721, 899, 1091, 1274
HpyF10VI	GCNNNNNNNGC	5 cut(s)	141, 489, 876, 1091, 1181
HpyF3I	CTNAG	4 cut(s)	203, 344, 875, 911
HpySE526I	ACGT	4 cut(s)	39, 211, 274, 461
Hsp92I	GRCGYC	3 cut(s)	211, 438, 481
Hsp92II	CATG	3 cut(s)	604, 1137, 1182
HspAI	GCGC	2 cut(s)	291, 490
Kzo9I	GATC	5 cut(s)	62, 251, 384, 419, 747
LmnI	GCTCC	3 cut(s)	835, 917, 1103
Lsp1109I	GCAGC	7 cut(s)	12, 883, 972, 1103, 1211, 1214, 1309
LweI	GCATC	2 cut(s)	888, 1025
MaeI	CTAG	5 cut(s)	177, 666, 698, 995, 1384
MaeII	ACGT	4 cut(s)	39, 211, 274, 461
MaeIII	GTNAC	7 cut(s)	285, 586, 652, 734, 806, 904, 1300
MalI	GATC	5 cut(s)	64, 253, 386, 421, 749
MboI	GATC	5 cut(s)	62, 251, 384, 419, 747
MboII	GAAGA	6 cut(s)	248, 315, 704, 784, 950, 998
MflI	RGATCY	3 cut(s)	62, 251, 384
MhlI	GDGCHC	3 cut(s)	733, 840, 1224
MluCI	AATT	2 cut(s)	1126, 1287
MmeI	TCCRAC	2 cut(s)	421, 459
MseI	TTAA	2 cut(s)	633, 777
MslI	CAYNNNNRTG	3 cut(s)	726, 1138, 1227
MspA1I	CMGCKG	2 cut(s)	25, 1322
MspCI	CTTAAG	1 cut(s)	632
MspI	CCGG	5 cut(s)	60, 106, 484, 657, 1214
MspR9I	CCNGG	1 cut(s)	119
MvaI	CCWGG	1 cut(s)	119
MvnI	CGCG	1 cut(s)	291
MwoI	GCNNNNNNNGC	5 cut(s)	141, 489, 876, 1091, 1181
NcoI	CCATGG	1 cut(s)	1178
NdeII	GATC	5 cut(s)	62, 251, 384, 419, 747
NlaIII	CATG	3 cut(s)	604, 1137, 1182
NlaIV	GGNNCC	4 cut(s)	70, 128, 253, 380
NmeAIII	GCCGAG	1 cut(s)	250
NmuCI	GTSAC	4 cut(s)	652, 806, 904, 1300
NspI	RCATGY	1 cut(s)	1137
PfeI	GAWTC	1 cut(s)	971
PflFI	GACNNNGTC	1 cut(s)	319
PinAI	ACCGGT	1 cut(s)	656
Psp124BI	GAGCTC	1 cut(s)	840
Psp6I	CCWGG	1 cut(s)	117
PspFI	CCCAGC	2 cut(s)	402, 1318
PspGI	CCWGG	1 cut(s)	117
PspN4I	GGNNCC	4 cut(s)	70, 128, 253, 380
PspPI	GGNCC	3 cut(s)	13, 127, 242
PsuI	RGATCY	3 cut(s)	62, 251, 384
PsyI	GACNNNGTC	1 cut(s)	319
PvuII	CAGCTG	1 cut(s)	1322
RsaI	GTAC	1 cut(s)	369
RsaNI	GTAC	1 cut(s)	368
RseI	CAYNNNNRTG	3 cut(s)	726, 1138, 1227
SacI	GAGCTC	1 cut(s)	840
SaqAI	TTAA	2 cut(s)	633, 777
Sau3AI	GATC	5 cut(s)	62, 251, 384, 419, 747
Sau96I	GGNCC	3 cut(s)	13, 127, 242
ScrFI	CCNGG	1 cut(s)	119
SduI	GDGCHC	3 cut(s)	733, 840, 1224
SfaNI	GCATC	2 cut(s)	888, 1025
SfcI	CTRYAG	3 cut(s)	495, 921, 1170
SgrAI	CRCCGGYG	1 cut(s)	656
SinI	GGWCC	1 cut(s)	242
SmiMI	CAYNNNNRTG	3 cut(s)	726, 1138, 1227
SmlI	CTYRAG	2 cut(s)	632, 946
SmoI	CTYRAG	2 cut(s)	632, 946
Sse9I	AATT	2 cut(s)	1126, 1287
SsiI	CCGC	8 cut(s)	23, 147, 230, 245, 260, 340, 523, 526
SspMI	CTAG	5 cut(s)	177, 666, 698, 995, 1384
SstI	GAGCTC	1 cut(s)	840
StyD4I	CCNGG	1 cut(s)	117
StyI	CCWWGG	1 cut(s)	1178
TaaI	ACNGT	9 cut(s)	321, 356, 367, 718, 790, 850, 1171, 1226, 1372
TaiI	ACGT	4 cut(s)	42, 214, 277, 464
TaqI	TCGA	4 cut(s)	690, 750, 763, 1252
TasI	AATT	2 cut(s)	1126, 1287
TauI	GCSGC	4 cut(s)	232, 262, 525, 528
TfiI	GAWTC	1 cut(s)	971
Tru1I	TTAA	2 cut(s)	633, 777
Tru9I	TTAA	2 cut(s)	633, 777
TscAI	CASTG	3 cut(s)	171, 723, 1198
TseFI	GTSAC	4 cut(s)	652, 806, 904, 1300
TseI	GCWGC	7 cut(s)	25, 896, 960, 1091, 1199, 1202, 1322
Tsp45I	GTSAC	4 cut(s)	652, 806, 904, 1300
TspDTI	ATGAA	3 cut(s)	17, 1281, 1299
TspRI	CASTG	3 cut(s)	171, 723, 1198
Tth111I	GACNNNGTC	1 cut(s)	319
Vha464I	CTTAAG	1 cut(s)	632
VpaK11BI	GGWCC	1 cut(s)	242
XapI	RAATTY	2 cut(s)	1126, 1287
XceI	RCATGY	1 cut(s)	1137
XcmI	CCANNNNNNNNNTGG	1 cut(s)	203
XspI	CTAG	5 cut(s)	177, 666, 698, 995, 1384
ZraI	GACGTC	1 cut(s)	212

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.