Rmu_sc0000261.1_g000006

Belongs to the glycosyltransferase 8 family

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0000261.1
Physical Location & Seq
Forward (+)
36555 .. 37758
1204 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0000261.1_g000006.1.cds

Sequence Viewer

Length: 1026 bp
atggctcctgagctcgttccctccgttccgaaatccactggcttcacccgaccagccacccttccgaggcgtgcgtacgtcactttcttggccggcaacggcgactacgtgaaaggcgtagtcggattggccaagggcttgaggaaggccaaaacggcgtaccctttagtcgttgcggtcttgcccgacgtccctgaagaccaccgccgcattcttgagtcgcagggttgcatcgtccgggaaatcgaaccagtttacccgccagagaaccagacccagttcgccatggcctattacgtcatcaactattccaagctccgtatatgggagtttgtggaatacgacaagatgatatacctggacggagacattcaggtgttcgacaatatagaccacctctttgacctgccggacggcaacttctacgccgtgatggactgtttctgcgagaaaacgtggagccacacgccgcagtacaagatcgggtactgccagcagtgcccggaaagagtcaagtgggactccgagctgggcccacctccgtcgctctacttcaacgccgggatgttcgtgttcgagcccagctttttgacctaccaagatctcttgaagaccctcaaggtcgccccaacgacgccgtttgctgagcaggactttttgaacatgtatttcagggatatttacaaaccaatccctccggtttacaatttggtcctggccatgttgtggcgtcaccccgagaatgttgagctcgacaaagtgaaagtcgtgcattactgtgcagcaggatcaaagccatggaggtatactgggaaggaagagaacatgcagagggaggacatcaagatgttggtgcagaaatggtgggacatttataacgacgagtctttggactacaagaagcagcagagcagtgctgtggttgcggcggttgaggctgagcaagcggtggacatgcagcctttcattgaggctctatccgaagccggtgctttacagtatgtgactgccccttctgcggcttag

Protein Analysis

341

Amino Acids

39.11

Weight (kDa)

5.13

Isoelectric Point (pI)

47.91

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0016492)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G47180
fragaria_vesca FvH4_1g26560
malus_domestica MD09G1288100.v1.1 MD17G1280400.v1.1
prunus_persica Prupe.3G005100_v2.0.a1
pyrus_communis pycom09g19550 pycom17g27830
rosa_chinensis RchiOBHm_Chr3g0486641
rosa_laevigata RLG00000023070
rosa_multiflora Rmu_sc0000261.1_g000006
rosa_rugosa Rorug03G0226200
rosa_samantha Rh3AG275700 Rh3DG306800
rosa_wichuraiana Rw3G024570

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 876
AatII GACGTC 1 cut(s) 192
Acc36I ACCTGC 1 cut(s) 414
AccB7I CCANNNNNTGG 1 cut(s) 726
AccI GTMKAC 1 cut(s) 806
AciI CCGC 9 cut(s) 176, 205, 208, 260, 470, 926, 929, 947, 1019
AclWI GGATC 1 cut(s) 796
AcoI YGGCCR 3 cut(s) 90, 129, 717
AcuI CTGAAG 1 cut(s) 216
AcyI GRCGYC 3 cut(s) 189, 635, 730
AfaI GTAC 4 cut(s) 77, 161, 476, 488
AfiI CCNNNNNNNGG 4 cut(s) 66, 325, 726, 1018
AflIII ACRYGT 1 cut(s) 663
AgsI TTSAA 3 cut(s) 556, 610, 661
AjnI CCWGG 2 cut(s) 357, 714
AluBI AGCT 5 cut(s) 13, 316, 529, 585, 751
AluI AGCT 5 cut(s) 13, 316, 529, 585, 751
Alw21I GWGCWC 2 cut(s) 15, 753
Alw26I GTCTC 1 cut(s) 360
AlwI GGATC 1 cut(s) 796
Ama87I CYCGRG 1 cut(s) 737
AoxI GGCC 6 cut(s) 90, 129, 147, 288, 532, 717
ApaI GGGCCC 1 cut(s) 536
ApeKI GCWGC 3 cut(s) 782, 904, 958
ArsI GACNNNNNNTTYG 4 cut(s) 383, 415, 750, 782
AspS9I GGNCC 3 cut(s) 532, 533, 712
AsuC2I CCSGG 3 cut(s) 239, 503, 562
AsuHPI GGTGA 2 cut(s) 37, 725
AvaI CYCGRG 1 cut(s) 737
AvaII GGWCC 1 cut(s) 712
BaeGI GKGCMC 2 cut(s) 503, 536
BalI TGGCCA 2 cut(s) 131, 719
BanII GRGCYC 4 cut(s) 15, 536, 582, 753
BbsI GAAGAC 2 cut(s) 204, 617
Bbv12I GWGCWC 2 cut(s) 15, 753
BbvI GCAGC 3 cut(s) 794, 916, 970
BccI CCATC 1 cut(s) 427
BceAI ACGGC 5 cut(s) 115, 171, 413, 430, 622
BcgI CGANNNNNNTGC 2 cut(s) 971, 1005
BciT130I CCWGG 2 cut(s) 359, 716
BcnI CCSGG 3 cut(s) 239, 503, 562
BcoDI GTCTC 1 cut(s) 360
BfuAI ACCTGC 1 cut(s) 414
BglI GCCNNNNNGGC 1 cut(s) 155
BglII AGATCT 1 cut(s) 601
BisI GCNGC 7 cut(s) 208, 470, 783, 905, 927, 959, 1020
BlpI GCTNAGC 2 cut(s) 645, 939
BlsI GCNGC 7 cut(s) 209, 471, 784, 906, 928, 960, 1021
Bme1390I CCNGG 5 cut(s) 239, 359, 503, 562, 716
Bme18I GGWCC 1 cut(s) 712
BmeT110I CYCGRG 1 cut(s) 737
BmgT120I GGNCC 3 cut(s) 532, 533, 712
BmiI GGNNCC 3 cut(s) 6, 461, 534
BmrFI CCNGG 5 cut(s) 239, 359, 503, 562, 716
BmrI ACTGGG 2 cut(s) 271, 819
BmsI GCATC 1 cut(s) 240
BmuI ACTGGG 2 cut(s) 271, 819
BpiI GAAGAC 2 cut(s) 204, 617
Bpu10I CCTNAGC 1 cut(s) 9
Bpu1102I GCTNAGC 2 cut(s) 645, 939
BpuEI CTTGAG 3 cut(s) 160, 236, 602
BpuMI CCSGG 3 cut(s) 239, 503, 562
BsaAI YACGTR 1 cut(s) 109
BsaHI GRCGYC 3 cut(s) 189, 635, 730
BsaJI CCNNGG 4 cut(s) 65, 132, 285, 797
BsaWI WCCGGW 1 cut(s) 697
Bsc4I CCNNNNNNNGG 4 cut(s) 66, 325, 726, 1018
Bse118I RCCGGY 2 cut(s) 92, 986
Bse1I ACTGG 4 cut(s) 43, 251, 277, 814
BseBI CCWGG 2 cut(s) 359, 716
BseDI CCNNGG 4 cut(s) 65, 132, 285, 797
BseGI GGATG 1 cut(s) 570
BseLI CCNNNNNNNGG 4 cut(s) 66, 325, 726, 1018
BseMII CTCAG 2 cut(s) 636, 930
BseNI ACTGG 4 cut(s) 43, 251, 277, 814
BseSI GKGCMC 2 cut(s) 503, 536
BseXI GCAGC 3 cut(s) 794, 916, 970
BseYI CCCAGC 2 cut(s) 529, 581
BsgI GTGCAG 2 cut(s) 801, 875
BshFI GGCC 6 cut(s) 92, 131, 149, 290, 534, 719
BsiHKAI GWGCWC 2 cut(s) 15, 753
BsiHKCI CYCGRG 1 cut(s) 737
BsiSI CCGG 7 cut(s) 93, 238, 410, 503, 561, 698, 987
BsiWI CGTACG 1 cut(s) 75
BslFI GGGAC 3 cut(s) 176, 533, 881
BslI CCNNNNNNNGG 4 cut(s) 66, 325, 726, 1018
BsmAI GTCTC 1 cut(s) 360
BsmFI GGGAC 3 cut(s) 176, 533, 881
BsmI GAATGC 1 cut(s) 210
BsnI GGCC 6 cut(s) 92, 131, 149, 290, 534, 719
BsoBI CYCGRG 1 cut(s) 737
Bsp120I GGGCCC 1 cut(s) 532
Bsp1286I GDGCHC 5 cut(s) 15, 503, 536, 582, 753
Bsp143I GATC 3 cut(s) 480, 601, 788
Bsp1720I GCTNAGC 2 cut(s) 645, 939
Bsp19I CCATGG 2 cut(s) 285, 797
BspACI CCGC 9 cut(s) 176, 205, 208, 260, 470, 926, 929, 947, 1019
BspANI GGCC 6 cut(s) 92, 131, 149, 290, 534, 719
BspCNI CTCAG 2 cut(s) 637, 931
BspLI GGNNCC 3 cut(s) 6, 461, 534
BspMI ACCTGC 1 cut(s) 414
BspPI GGATC 1 cut(s) 796
BsrFI RCCGGY 2 cut(s) 92, 986
BsrI ACTGG 4 cut(s) 43, 251, 277, 814
BssAI RCCGGY 2 cut(s) 92, 986
BssECI CCNNGG 4 cut(s) 65, 132, 285, 797
BssMI GATC 3 cut(s) 480, 601, 788
BssNAI GTATAC 1 cut(s) 807
BssNI GRCGYC 3 cut(s) 189, 635, 730
BssT1I CCWWGG 3 cut(s) 132, 285, 797
Bst1107I GTATAC 1 cut(s) 807
Bst2UI CCWGG 2 cut(s) 359, 716
Bst4CI ACNGT 3 cut(s) 440, 779, 999
Bst6I CTCTTC 1 cut(s) 813
BstACI GRCGYC 3 cut(s) 189, 635, 730
BstBAI YACGTR 1 cut(s) 109
BstC8I GCNNGC 4 cut(s) 72, 94, 494, 945
BstDEI CTNAG 4 cut(s) 9, 645, 939, 1023
BstDSI CCRYGG 2 cut(s) 285, 797
BstF5I GGATG 1 cut(s) 570
BstKTI GATC 3 cut(s) 483, 604, 791
BstMAI GTCTC 1 cut(s) 360
BstMBI GATC 3 cut(s) 480, 601, 788
BstMWI GCNNNNNNNGC 6 cut(s) 155, 498, 923, 935, 944, 1016
BstNI CCWGG 2 cut(s) 359, 716
BstNSI RCATGY 3 cut(s) 667, 829, 958
BstSCI CCNGG 5 cut(s) 237, 357, 501, 560, 714
BstSLI GKGCMC 2 cut(s) 503, 536
BstV1I GCAGC 3 cut(s) 794, 916, 970
BstV2I GAAGAC 2 cut(s) 204, 617
BstX2I RGATCY 1 cut(s) 601
BstYI RGATCY 1 cut(s) 601
BstZ17I GTATAC 1 cut(s) 807
BsuRI GGCC 6 cut(s) 92, 131, 149, 290, 534, 719
BtgI CCRYGG 2 cut(s) 285, 797
BtsCI GGATG 1 cut(s) 570
BtsI GCAGTG 2 cut(s) 503, 919
BtsIMutI CAGTG 3 cut(s) 36, 503, 919
BveI ACCTGC 1 cut(s) 414
Cac8I GCNNGC 4 cut(s) 72, 94, 494, 945
Cfr10I RCCGGY 2 cut(s) 92, 986
Cfr13I GGNCC 3 cut(s) 532, 533, 712
CseI GACGC 2 cut(s) 643, 719
Csp6I GTAC 4 cut(s) 76, 160, 475, 487
CviAII CATG 6 cut(s) 286, 664, 721, 798, 826, 955
CviQI GTAC 4 cut(s) 76, 160, 475, 487
DdeI CTNAG 4 cut(s) 9, 645, 939, 1023
DpnI GATC 3 cut(s) 482, 603, 790
DpnII GATC 3 cut(s) 480, 601, 788
EaeI YGGCCR 3 cut(s) 90, 129, 717
Eam1104I CTCTTC 1 cut(s) 813
EarI CTCTTC 1 cut(s) 813
Ecl136II GAGCTC 2 cut(s) 13, 751
Eco130I CCWWGG 3 cut(s) 132, 285, 797
Eco24I GRGCYC 4 cut(s) 15, 536, 582, 753
Eco47I GGWCC 1 cut(s) 712
Eco53kI GAGCTC 2 cut(s) 13, 751
Eco57I CTGAAG 1 cut(s) 216
Eco88I CYCGRG 1 cut(s) 737
EcoICRI GAGCTC 2 cut(s) 13, 751
EcoRII CCWGG 2 cut(s) 357, 714
EcoT14I CCWWGG 3 cut(s) 132, 285, 797
EcoT38I GRGCYC 4 cut(s) 15, 536, 582, 753
ErhI CCWWGG 3 cut(s) 132, 285, 797
FaeI CATG 6 cut(s) 289, 667, 724, 801, 829, 958
FaqI GGGAC 3 cut(s) 176, 533, 881
FatI CATG 6 cut(s) 285, 663, 720, 797, 825, 954
FauI CCCGC 1 cut(s) 267
FblI GTMKAC 1 cut(s) 806
Fnu4HI GCNGC 7 cut(s) 208, 470, 783, 905, 927, 959, 1020
FokI GGATG 1 cut(s) 577
FriOI GRGCYC 4 cut(s) 15, 536, 582, 753
Fsp4HI GCNGC 7 cut(s) 208, 470, 783, 905, 927, 959, 1020
GluI GCNGC 7 cut(s) 208, 470, 783, 905, 927, 959, 1020
GsaI CCCAGC 2 cut(s) 533, 585
HaeIII GGCC 6 cut(s) 92, 131, 149, 290, 534, 719
HapII CCGG 7 cut(s) 93, 238, 410, 503, 561, 698, 987
HgaI GACGC 2 cut(s) 643, 719
Hin1I GRCGYC 3 cut(s) 189, 635, 730
Hin1II CATG 6 cut(s) 289, 667, 724, 801, 829, 958
HinfI GANTC 4 cut(s) 218, 510, 521, 884
HpaII CCGG 7 cut(s) 93, 238, 410, 503, 561, 698, 987
HphI GGTGA 2 cut(s) 37, 725
Hpy166II GTNNAC 4 cut(s) 256, 703, 807, 952
Hpy188I TCNGA 5 cut(s) 30, 66, 125, 526, 982
Hpy188III TCNNGA 4 cut(s) 8, 215, 607, 844
Hpy8I GTNNAC 4 cut(s) 256, 703, 807, 952
Hpy99I CGWCG 4 cut(s) 191, 547, 637, 884
HpyAV CCTTC 4 cut(s) 71, 139, 808, 1023
HpyCH4III ACNGT 3 cut(s) 440, 779, 999
HpyCH4IV ACGT 5 cut(s) 78, 108, 189, 297, 455
HpyCH4V TGCA 6 cut(s) 231, 772, 782, 829, 856, 958
HpyF10VI GCNNNNNNNGC 6 cut(s) 155, 498, 923, 935, 944, 1016
HpyF3I CTNAG 4 cut(s) 9, 645, 939, 1023
HpySE526I ACGT 5 cut(s) 78, 108, 189, 297, 455
Hsp92I GRCGYC 3 cut(s) 189, 635, 730
Hsp92II CATG 6 cut(s) 289, 667, 724, 801, 829, 958
KroI GCCGGC 1 cut(s) 92
KroNI GCCGGC 1 cut(s) 94
Kzo9I GATC 3 cut(s) 480, 601, 788
LmnI GCTCC 3 cut(s) 10, 321, 459
Lsp1109I GCAGC 3 cut(s) 794, 916, 970
LweI GCATC 1 cut(s) 240
MaeII ACGT 5 cut(s) 78, 108, 189, 297, 455
MaeIII GTNAC 3 cut(s) 79, 731, 1003
MalI GATC 3 cut(s) 482, 603, 790
MboI GATC 3 cut(s) 480, 601, 788
MboII GAAGA 3 cut(s) 209, 622, 830
MflI RGATCY 1 cut(s) 601
MhlI GDGCHC 5 cut(s) 15, 503, 536, 582, 753
MlsI TGGCCA 2 cut(s) 131, 719
MluCI AATT 1 cut(s) 706
MluNI TGGCCA 2 cut(s) 131, 719
MlyI GAGTC 4 cut(s) 227, 515, 519, 893
MmeI TCCRAC 1 cut(s) 103
Mox20I TGGCCA 2 cut(s) 131, 719
MroNI GCCGGC 1 cut(s) 92
MscI TGGCCA 2 cut(s) 131, 719
MslI CAYNNNNRTG 3 cut(s) 374, 777, 845
Msp20I TGGCCA 2 cut(s) 131, 719
MspI CCGG 7 cut(s) 93, 238, 410, 503, 561, 698, 987
MspR9I CCNGG 5 cut(s) 239, 359, 503, 562, 716
Mva1269I GAATGC 1 cut(s) 210
MvaI CCWGG 2 cut(s) 359, 716
MwoI GCNNNNNNNGC 6 cut(s) 155, 498, 923, 935, 944, 1016
NaeI GCCGGC 1 cut(s) 94
NciI CCSGG 3 cut(s) 239, 503, 562
NcoI CCATGG 2 cut(s) 285, 797
NdeII GATC 3 cut(s) 480, 601, 788
NgoMIV GCCGGC 1 cut(s) 92
NlaIII CATG 6 cut(s) 289, 667, 724, 801, 829, 958
NlaIV GGNNCC 3 cut(s) 6, 461, 534
NmuCI GTSAC 3 cut(s) 79, 731, 1003
NspI RCATGY 3 cut(s) 667, 829, 958
PciI ACATGT 1 cut(s) 663
PcsI WCGNNNNNNNCGW 3 cut(s) 21, 105, 114
PctI GAATGC 1 cut(s) 210
PdiI GCCGGC 1 cut(s) 94
Pfl23II CGTACG 1 cut(s) 75
PflMI CCANNNNNTGG 1 cut(s) 726
PfoI TCCNGGA 1 cut(s) 237
PkrI GCNGC 7 cut(s) 209, 471, 784, 906, 928, 960, 1021
PleI GAGTC 4 cut(s) 226, 515, 518, 892
PpsI GAGTC 4 cut(s) 226, 515, 518, 892
Ppu21I YACGTR 1 cut(s) 109
PscI ACATGT 1 cut(s) 663
PsiI TTATAA 1 cut(s) 876
Psp124BI GAGCTC 2 cut(s) 15, 753
Psp6I CCWGG 2 cut(s) 357, 714
PspFI CCCAGC 2 cut(s) 529, 581
PspGI CCWGG 2 cut(s) 357, 714
PspLI CGTACG 1 cut(s) 75
PspN4I GGNNCC 3 cut(s) 6, 461, 534
PspOMI GGGCCC 1 cut(s) 532
PspPI GGNCC 3 cut(s) 532, 533, 712
PsuI RGATCY 1 cut(s) 601
RsaI GTAC 4 cut(s) 77, 161, 476, 488
RsaNI GTAC 4 cut(s) 76, 160, 475, 487
RseI CAYNNNNRTG 3 cut(s) 374, 777, 845
SacI GAGCTC 2 cut(s) 15, 753
SatI GCNGC 7 cut(s) 208, 470, 783, 905, 927, 959, 1020
Sau3AI GATC 3 cut(s) 480, 601, 788
Sau96I GGNCC 3 cut(s) 532, 533, 712
SchI GAGTC 4 cut(s) 227, 515, 519, 893
ScrFI CCNGG 5 cut(s) 239, 359, 503, 562, 716
SduI GDGCHC 5 cut(s) 15, 503, 536, 582, 753
SfaNI GCATC 1 cut(s) 240
SinI GGWCC 1 cut(s) 712
SmiMI CAYNNNNRTG 3 cut(s) 374, 777, 845
SmlI CTYRAG 3 cut(s) 139, 215, 617
SmoI CTYRAG 3 cut(s) 139, 215, 617
Sse9I AATT 1 cut(s) 706
SsiI CCGC 9 cut(s) 176, 205, 208, 260, 470, 926, 929, 947, 1019
SstI GAGCTC 2 cut(s) 15, 753
StyD4I CCNGG 5 cut(s) 237, 357, 501, 560, 714
StyI CCWWGG 3 cut(s) 132, 285, 797
TaaI ACNGT 3 cut(s) 440, 779, 999
TaiI ACGT 5 cut(s) 81, 111, 192, 300, 458
TaqI TCGA 4 cut(s) 246, 381, 576, 753
TasI AATT 1 cut(s) 706
TatI WGTACW 1 cut(s) 474
TauI GCSGC 4 cut(s) 210, 472, 929, 1022
TscAI CASTG 3 cut(s) 43, 503, 919
TseFI GTSAC 3 cut(s) 79, 731, 1003
TseI GCWGC 3 cut(s) 782, 904, 958
Tsp45I GTSAC 3 cut(s) 79, 731, 1003
TspDTI ATGAA 1 cut(s) 955
TspGWI ACGGA 4 cut(s) 13, 308, 378, 531
TspRI CASTG 3 cut(s) 43, 503, 919
Van91I CCANNNNNTGG 1 cut(s) 726
VpaK11BI GGWCC 1 cut(s) 712
XceI RCATGY 3 cut(s) 667, 829, 958
XmiI GTMKAC 1 cut(s) 806
ZraI GACGTC 1 cut(s) 190
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.