Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr10

Orthogroup ID

OG0009196

Physical Location & Seq

Genomic Coordinates Forward (+)

840484 .. 847250

Gene Structure 6767 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD10G1005500.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2574 bp

ATGTCTTTCTTTCCCTCCAATTCCCAAATCCAAACCCAAAATGCCGACTCCCGTTTCCAGGCCACCGTGCTCGTCGGCGCTCCATCCTTCCCCGACGCCATCGCTTGGTCCGACGAGAACCTCATCGCTGTAACTTCCGGCCACCTCGTCACCATTCTGAATCCGGCTGCTCTGCCTTTTGGACCAAGAGGCCTAATCACCATAAAAAACAGCCAACCTTTTCCGAGTGGTGTCATAGATAGACAAGATTTATTCTCTAATTACATGCTGCCTACCATTTTATCACGGGATCAAGAACCCTGTGTTCGATCGATTTCTTGGTCCCCAGTTGGGCTTGCTCCGAACGCAGGCTGCTTGCTGGCTGTCTGCACCACCCAAGGTTTCGTCAAGCTTTATTGCTCCCCATATTGTGATTTTTGTGCTGAATGGATAGAGGTTGCGAATATATCTGCCAAGCTTTATGATTATCTTGCGAGTATTAATTTTGGGGAGGTATGGGCTTCTTCATCAAAACTGCAAGATGTAAATGAGCATGAAATAGAGCCTGAGATTGACTATGACCCGTCGAAACAAAAGAGTTCAAATAAGATTGTTCGTGCTTCAAAATCGAAAGTAAAACCTGCCAAGGAGATACCAGAAAATAGCACACTCCCTCTTATAACTGCGGATCAATACGCTTCTCGCACTGCAATGCTATCATCTCTTGTAGTTGCTTGGTCGCCAATGCTGCATTCACTATCCAAAATCTGTTCAGTTCCTCAAGATGGTTCGTCCATGTCGTTACTTGCAGTTGGTGGGAAGTCCGGGAAAGTTTTTGTATGGAGAATTCCTGTACCAGAATGCTACTCTGTTGATCAAATTAGGGTCCCGGCAACTGTGGCGCTCATAGGGATGCTTCAGGCACACAATTCATGGATCACAGCTATTGGTTGGGCATTGCTTGATTCCGATTCTTCAAATCCTAAAGTTTTGTTGGCTACAGCGAGTACTGATGGGAGTGTGAGGATCTGGCTAGGGAATAATGAAAAGTTGCTGAAGTCATCAGAACCTAGTCACACTTCTTTTTCCTTATTGAAGGAGGTTGCAAGCGATGCTGCCCCAGTTTTTGTACTTTCAGTCATTGTGCCTACCAAGTCTCCAGACAAAATTCACTTAGCAGTTGGAAAAGGATTTGGCTCTTTTGAATTGTGGATATGCAACATATCTAGCCAAAATTTTGACAAGATTGGCACATATGATGCGCATGGCCAGATAGTTACAGGATTAGCTTGGGCGTTTGATGGGCAATCTTTGTATAGCTGCAGCCAGGATAATGTTATACGCTGTTGGATTTTGAGTGGAAGTTCTCTATGTGAAGTACCTATTCCTTCAAATACTCCTCGTCTGAGAAACTCAACTGATTTACCAGAAGAATTTGTTTCTTGCTTTGGTCTGGCAGTGTCCCCTGGAAATCTTGTGATTGCTTGGGTTCGAAATACTGATGTTGAACAATTAAACCCAATGTACGAGGCAAGGACTCAAAAGGCCATTGTTGAGTTTTTCTGGACTGGTGGGCAGCAAGTAGATGTCTTGCCAAACAATTCCCTACATTTTGATATTGAAGCGATTCCTGGTTTTTCTGAGGAGTTGGTTTATTGGGAGTCCAACTTTCTATGGTCCTTAAAGCAGTATGAAATGCAAGATAAACCTCTGGTTGTTTGGGATATTGTAACAGCATTGTTGGCTTTCAATCATTCTAAACCAGAGTTTGTAGACGAAGTACTGATTAAGTGGCTGTCTATTTCATACTTGGGATCTCAAGCGGGCATTCCTGCTGAAACGGTTTTGTTGAACGTCTCCCAAAGTTGCTCAATAGTTACTTCTCGCCGATTACACCTTCTCAATATAATCTGCAGACGTGTGATTCTATCAAAGATGAAGGCTGATGAAATAAACAGTAAATTACTGAATTTGAAAGGAGTACTTGGTGCTGATAAAGAGAAGCGGTCTTTGTGGATCAATCTGCTTTTGAACAGTGAAAAAGAACTCCGGGAAAGGCTTGTGGGATTTACATTTTCTGCTCTTTTAAGTCAAATGCCTATTTCAGCCCCAAATTCTCCATCTGGAAAGTGGTTTCCTGTTGGCTTAGCACAAATGGAGCAGTGGATTAAGCTTAATCATGATCATGTGCACGGTCAGCTAAAGGTCCTCGCATCCGAAGTTGGAAAGCGGGATAGGAGGTTTAAGTCCAGTAAATGCACAGCAGCAGAGATGTGCAGCTATTGTTTAGCATCAGTTCCATTTGAATCTCCAGAAGTTGCCATCTGCAGCGGAAAGGGCCACAAACTAGTCAGGTGTTCCATTTCTATGGAGATTTGTCCCACTACTCCAACATGGTTTTGCACATGCTGTCATAGACGAGCTTCCAAACCGGCACCAGCGACTTTGTTTGCAACCCCCGATCTTCCTTTGAATTTCAAATCTTTGGCTGCATCGCCTTTGCTAGACGTATCTTTAAAACCATCGTGTCCTTTTTGTGGTATACTACTACAAAGACTACAACCGGATTTCCTACTTTCTGCATCACCCACTTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

TFIIIC_delta WD40 zf-TFIIIC

Protein Analysis

858

Amino Acids

94.19

Weight (kDa)

6.45

Isoelectric Point (pI)

48.47

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
TFIIIC_delta	PF12657	36 - 491	7.2e-24	Transcription factor IIIC subunit delta bet-propeller domain
WD40	PF00400	408 - 443	2.7e-06	WD domain, G-beta repeat

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0009196)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G49400 AT3G49400 AT3G49400 AT3G49400
fragaria_vesca	FvH4_4g12930
malus_domestica	MD04G1021200.v1.1 MD10G1005500.v1.1 MD10G1005800.v1.1
prunus_persica	Prupe.1G170200_v2.0.a1 Prupe.1G170200_v2.0.a1
pyrus_communis	pycom04g01670
rosa_chinensis	RchiOBHm_Chr4g0412561
rosa_laevigata	RLG00000008274
rosa_multiflora	Rmu_sc0002136.1_g000002 Rmu_sc0033953.1_g000001
rosa_roxburghii	Rroxscaffold_5G00356780
rosa_rugosa	Rorug04G0102900
rosa_samantha	Rh4AG174300 Rh4BG173500 Rh4CG185000 Rh4DG169800
rosa_wichuraiana	Rw4G014600

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	659
Acc16I	TGCGCA	1 cut(s)	1242
Acc36I	ACCTGC	1 cut(s)	628
AccB1I	GGYRCC	1 cut(s)	2413
AccB7I	CCANNNNNTGG	1 cut(s)	105
AccI	GTMKAC	2 cut(s)	1752, 2521
AciI	CCGC	5 cut(s)	665, 1802, 1984, 2209, 2310
AclWI	GGATC	6 cut(s)	297, 675, 923, 1013, 1801, 2003
AcoI	YGGCCR	2 cut(s)	139, 1246
AcsI	RAATTY	7 cut(s)	825, 1146, 1213, 1412, 1948, 2092, 2452
AcuI	CTGAAG	2 cut(s)	881, 1055
AcyI	GRCGYC	1 cut(s)	96
AfaI	GTAC	7 cut(s)	834, 988, 1110, 1359, 1505, 1761, 1962
AfiI	CCNNNNNNNGG	6 cut(s)	58, 105, 330, 347, 764, 2516
AflIII	ACRYGT	1 cut(s)	1897
AhlI	ACTAGT	1 cut(s)	2326
AjiI	CACGTC	1 cut(s)	1898
AjnI	CCWGG	4 cut(s)	57, 1305, 1444, 1609
AjuI	GAANNNNNNNTTGG	2 cut(s)	715, 747
AluBI	AGCT	9 cut(s)	391, 457, 923, 1268, 1299, 2152, 2179, 2259, 2402
AluI	AGCT	9 cut(s)	391, 457, 923, 1268, 1299, 2152, 2179, 2259, 2402
Alw21I	GWGCWC	2 cut(s)	72, 2172
Alw26I	GTCTC	2 cut(s)	1140, 1840
Alw44I	GTGCAC	1 cut(s)	2168
AlwI	GGATC	6 cut(s)	297, 675, 923, 1013, 1801, 2003
AoxI	GGCC	6 cut(s)	60, 139, 190, 1246, 1524, 2317
ApaLI	GTGCAC	1 cut(s)	2168
ApoI	RAATTY	7 cut(s)	825, 1146, 1213, 1412, 1948, 2092, 2452
AseI	ATTAAT	1 cut(s)	480
Asp700I	GAANNNNTTC	1 cut(s)	1605
AspLEI	GCGC	3 cut(s)	80, 883, 1243
AspS9I	GGNCC	7 cut(s)	108, 182, 321, 865, 1656, 2185, 2317
AsuC2I	CCSGG	3 cut(s)	805, 869, 2030
AsuHPI	GGTGA	3 cut(s)	142, 190, 2556
AsuII	TTCGAA	1 cut(s)	1471
AvaII	GGWCC	6 cut(s)	108, 182, 321, 865, 1656, 2185
BaeGI	GKGCMC	1 cut(s)	2172
BalI	TGGCCA	1 cut(s)	1248
BanI	GGYRCC	1 cut(s)	2413
Bbv12I	GWGCWC	2 cut(s)	72, 2172
BccI	CCATC	8 cut(s)	91, 107, 758, 986, 1274, 2107, 2309, 2509
BciT130I	CCWGG	4 cut(s)	59, 1307, 1446, 1611
BclI	TGATCA	2 cut(s)	853, 2161
BcnI	CCSGG	3 cut(s)	805, 869, 2030
BcoDI	GTCTC	2 cut(s)	1140, 1840
BcuI	ACTAGT	1 cut(s)	2326
BfaI	CTAG	5 cut(s)	1013, 1050, 1206, 2327, 2483
BfmI	CTRYAG	4 cut(s)	978, 1300, 1891, 2305
BfoI	RGCGCY	2 cut(s)	81, 884
BfuAI	ACCTGC	1 cut(s)	628
BlpI	GCTNAGC	1 cut(s)	2125
BmcAI	AGTACT	3 cut(s)	988, 1761, 1962
Bme1390I	CCNGG	7 cut(s)	59, 805, 869, 1307, 1446, 1611, 2030
Bme18I	GGWCC	6 cut(s)	108, 182, 321, 865, 1656, 2185
BmgBI	CACGTC	1 cut(s)	1898
BmgT120I	GGNCC	7 cut(s)	108, 182, 321, 865, 1656, 2185, 2317
BmiI	GGNNCC	4 cut(s)	323, 866, 867, 2415
BmrFI	CCNGG	7 cut(s)	59, 805, 869, 1307, 1446, 1611, 2030
BmrI	ACTGGG	2 cut(s)	320, 1094
BmsI	GCATC	7 cut(s)	882, 1081, 1228, 2201, 2279, 2480, 2570
BmuI	ACTGGG	2 cut(s)	320, 1094
BpmI	CTGGAG	2 cut(s)	1122, 2274
Bpu1102I	GCTNAGC	1 cut(s)	2125
Bpu14I	TTCGAA	1 cut(s)	1471
BpuEI	CTTGAG	2 cut(s)	744, 1782
BpuMI	CCSGG	3 cut(s)	805, 869, 2030
Bsa29I	ATCGAT	1 cut(s)	311
BsaHI	GRCGYC	1 cut(s)	96
BsaJI	CCNNGG	3 cut(s)	376, 624, 1444
BsaWI	WCCGGW	1 cut(s)	2542
BsaXI	ACNNNNNCTCC	2 cut(s)	1120, 1150
Bsc4I	CCNNNNNNNGG	6 cut(s)	58, 105, 330, 347, 764, 2516
Bse118I	RCCGGY	1 cut(s)	2410
Bse1I	ACTGG	4 cut(s)	326, 1100, 1552, 2229
Bse3DI	GCAATG	2 cut(s)	696, 935
BseBI	CCWGG	4 cut(s)	59, 1307, 1446, 1611
BseCI	ATCGAT	1 cut(s)	311
BseDI	CCNNGG	3 cut(s)	376, 624, 1444
BseGI	GGATG	3 cut(s)	83, 897, 2192
BseLI	CCNNNNNNNGG	6 cut(s)	58, 105, 330, 347, 764, 2516
BseMI	GCAATG	2 cut(s)	696, 935
BseMII	CTCAG	3 cut(s)	537, 1376, 1611
BseNI	ACTGG	4 cut(s)	326, 1100, 1552, 2229
BseRI	GAGGAG	2 cut(s)	1368, 1637
BseSI	GKGCMC	1 cut(s)	2172
BsgI	GTGCAG	2 cut(s)	352, 2275
Bsh1285I	CGRYCG	1 cut(s)	311
BshFI	GGCC	6 cut(s)	62, 141, 192, 1248, 1526, 2319
BshNI	GGYRCC	1 cut(s)	2413
BshVI	ATCGAT	1 cut(s)	311
BsiEI	CGRYCG	1 cut(s)	311
BsiHKAI	GWGCWC	2 cut(s)	72, 2172
BsiSI	CCGG	7 cut(s)	138, 164, 804, 869, 2029, 2411, 2543
BslFI	GGGAC	4 cut(s)	307, 851, 1426, 2343
BslI	CCNNNNNNNGG	6 cut(s)	58, 105, 330, 347, 764, 2516
BsmAI	GTCTC	2 cut(s)	1140, 1840
BsmBI	CGTCTC	1 cut(s)	1840
BsmFI	GGGAC	4 cut(s)	307, 851, 1426, 2343
BsmI	GAATGC	3 cut(s)	730, 845, 1806
BsnI	GGCC	6 cut(s)	62, 141, 192, 1248, 1526, 2319
Bsp119I	TTCGAA	1 cut(s)	1471
Bsp1286I	GDGCHC	2 cut(s)	72, 2172
Bsp1720I	GCTNAGC	1 cut(s)	2125
BspACI	CCGC	5 cut(s)	665, 1802, 1984, 2209, 2310
BspANI	GGCC	6 cut(s)	62, 141, 192, 1248, 1526, 2319
BspCNI	CTCAG	3 cut(s)	538, 1377, 1612
BspDI	ATCGAT	1 cut(s)	311
BspHI	TCATGA	1 cut(s)	2158
BspLI	GGNNCC	4 cut(s)	323, 866, 867, 2415
BspMAI	CTGCAG	3 cut(s)	1304, 1895, 2309
BspMI	ACCTGC	1 cut(s)	628
BspPI	GGATC	6 cut(s)	297, 675, 923, 1013, 1801, 2003
BspT104I	TTCGAA	1 cut(s)	1471
BspT107I	GGYRCC	1 cut(s)	2413
BsrDI	GCAATG	2 cut(s)	696, 935
BsrFI	RCCGGY	1 cut(s)	2410
BsrI	ACTGG	4 cut(s)	326, 1100, 1552, 2229
BssAI	RCCGGY	1 cut(s)	2410
BssECI	CCNNGG	3 cut(s)	376, 624, 1444
BssNAI	GTATAC	1 cut(s)	2522
BssNI	GRCGYC	1 cut(s)	96
BssT1I	CCWWGG	2 cut(s)	376, 624
Bst1107I	GTATAC	1 cut(s)	2522
Bst2UI	CCWGG	4 cut(s)	59, 1307, 1446, 1611
Bst4CI	ACNGT	6 cut(s)	67, 877, 1822, 1937, 2015, 2174
BstACI	GRCGYC	1 cut(s)	96
BstAPI	GCANNNNNTGC	1 cut(s)	1091
BstBI	TTCGAA	1 cut(s)	1471
BstC8I	GCNNGC	6 cut(s)	336, 349, 356, 360, 1087, 1804
BstDEI	CTNAG	5 cut(s)	546, 1153, 1385, 1620, 2125
BstF5I	GGATG	3 cut(s)	83, 897, 2192
BstH2I	RGCGCY	2 cut(s)	81, 884
BstHHI	GCGC	3 cut(s)	80, 883, 1243
BstMAI	GTCTC	2 cut(s)	1140, 1840
BstMCI	CGRYCG	1 cut(s)	311
BstMWI	GCNNNNNNNGC	7 cut(s)	344, 727, 878, 1091, 1721, 2176, 2316
BstNI	CCWGG	4 cut(s)	59, 1307, 1446, 1611
BstNSI	RCATGY	2 cut(s)	268, 2388
BstSCI	CCNGG	7 cut(s)	57, 803, 867, 1305, 1444, 1609, 2028
BstSFI	CTRYAG	4 cut(s)	978, 1300, 1891, 2305
BstSLI	GKGCMC	1 cut(s)	2172
BstX2I	RGATCY	2 cut(s)	1005, 1793
BstXI	CCANNNNNNTGG	1 cut(s)	2347
BstYI	RGATCY	2 cut(s)	1005, 1793
BstZ17I	GTATAC	1 cut(s)	2522
Bsu15I	ATCGAT	1 cut(s)	311
BsuRI	GGCC	6 cut(s)	62, 141, 192, 1248, 1526, 2319
BsuTUI	ATCGAT	1 cut(s)	311
BtgZI	GCGATG	4 cut(s)	85, 109, 1104, 2457
BtrI	CACGTC	1 cut(s)	1898
BtsCI	GGATG	3 cut(s)	83, 897, 2192
BtsI	GCAGTG	3 cut(s)	684, 1443, 2147
BtsIMutI	CAGTG	4 cut(s)	684, 1443, 2020, 2147
BveI	ACCTGC	1 cut(s)	628
Cac8I	GCNNGC	6 cut(s)	336, 349, 356, 360, 1087, 1804
CciI	TCATGA	1 cut(s)	2158
CfoI	GCGC	3 cut(s)	80, 883, 1243
Cfr10I	RCCGGY	1 cut(s)	2410
Cfr13I	GGNCC	7 cut(s)	108, 182, 321, 865, 1656, 2185, 2317
ClaI	ATCGAT	1 cut(s)	311
CseI	GACGC	1 cut(s)	104
Csp6I	GTAC	7 cut(s)	833, 987, 1109, 1358, 1504, 1760, 1961
CviAII	CATG	9 cut(s)	265, 533, 775, 912, 1244, 2159, 2165, 2373, 2385
CviQI	GTAC	7 cut(s)	833, 987, 1109, 1358, 1504, 1760, 1961
DdeI	CTNAG	5 cut(s)	546, 1153, 1385, 1620, 2125
DraI	TTTAAA	1 cut(s)	2496
EaeI	YGGCCR	2 cut(s)	139, 1246
Eco130I	CCWWGG	2 cut(s)	376, 624
Eco147I	AGGCCT	1 cut(s)	192
Eco47I	GGWCC	6 cut(s)	108, 182, 321, 865, 1656, 2185
Eco57I	CTGAAG	2 cut(s)	881, 1055
EcoO109I	RGGNCCY	2 cut(s)	865, 2185
EcoRI	GAATTC	1 cut(s)	825
EcoRII	CCWGG	4 cut(s)	57, 1305, 1444, 1609
EcoT14I	CCWWGG	2 cut(s)	376, 624
ErhI	CCWWGG	2 cut(s)	376, 624
Esp3I	CGTCTC	1 cut(s)	1840
FaeI	CATG	9 cut(s)	268, 536, 778, 915, 1247, 2162, 2168, 2376, 2388
FalI	AAGNNNNNCTT	2 cut(s)	1947, 1979
FaqI	GGGAC	4 cut(s)	307, 851, 1426, 2343
FatI	CATG	9 cut(s)	264, 532, 774, 911, 1243, 2158, 2164, 2372, 2384
FauI	CCCGC	2 cut(s)	1795, 2202
FauNDI	CATATG	1 cut(s)	1234
FbaI	TGATCA	2 cut(s)	853, 2161
FblI	GTMKAC	2 cut(s)	1752, 2521
FokI	GGATG	3 cut(s)	70, 904, 2179
FspAI	RTGCGCAY	1 cut(s)	1242
FspBI	CTAG	5 cut(s)	1013, 1050, 1206, 2327, 2483
FspI	TGCGCA	1 cut(s)	1242
GlaI	GCGC	3 cut(s)	79, 882, 1242
GsuI	CTGGAG	2 cut(s)	1122, 2274
HaeII	RGCGCY	2 cut(s)	81, 884
HaeIII	GGCC	6 cut(s)	62, 141, 192, 1248, 1526, 2319
HapII	CCGG	7 cut(s)	138, 164, 804, 869, 2029, 2411, 2543
HgaI	GACGC	1 cut(s)	104
HhaI	GCGC	3 cut(s)	80, 883, 1243
Hin1I	GRCGYC	1 cut(s)	96
Hin1II	CATG	9 cut(s)	268, 536, 778, 915, 1247, 2162, 2168, 2376, 2388
Hin6I	GCGC	3 cut(s)	78, 881, 1241
HinP1I	GCGC	3 cut(s)	78, 881, 1241
HindIII	AAGCTT	3 cut(s)	389, 455, 2150
HinfI	GANTC	9 cut(s)	47, 160, 944, 950, 1516, 1606, 1640, 1903, 2285
HpaII	CCGG	7 cut(s)	138, 164, 804, 869, 2029, 2411, 2543
HphI	GGTGA	3 cut(s)	142, 190, 2556
Hpy166II	GTNNAC	3 cut(s)	1753, 2170, 2522
Hpy188I	TCNGA	9 cut(s)	112, 159, 225, 342, 949, 1045, 1386, 1621, 2197
Hpy188III	TCNNGA	7 cut(s)	293, 761, 1139, 1543, 2103, 2159, 2291
Hpy8I	GTNNAC	3 cut(s)	1753, 2170, 2522
Hpy99I	CGWCG	4 cut(s)	77, 98, 116, 568
HpyAV	CCTTC	5 cut(s)	97, 1069, 1377, 1886, 1912
HpyCH4III	ACNGT	6 cut(s)	67, 877, 1822, 1937, 2015, 2174
HpyCH4IV	ACGT	3 cut(s)	1833, 1897, 2487
HpyF10VI	GCNNNNNNNGC	7 cut(s)	344, 727, 878, 1091, 1721, 2176, 2316
HpyF3I	CTNAG	5 cut(s)	546, 1153, 1385, 1620, 2125
HpySE526I	ACGT	3 cut(s)	1833, 1897, 2487
Hsp92I	GRCGYC	1 cut(s)	96
Hsp92II	CATG	9 cut(s)	268, 536, 778, 915, 1247, 2162, 2168, 2376, 2388
HspAI	GCGC	3 cut(s)	78, 881, 1241
KflI	GGGWCCC	1 cut(s)	865
Ksp22I	TGATCA	2 cut(s)	853, 2161
LmnI	GCTCC	4 cut(s)	85, 343, 404, 2137
LweI	GCATC	7 cut(s)	882, 1081, 1228, 2201, 2279, 2480, 2570
MaeI	CTAG	5 cut(s)	1013, 1050, 1206, 2327, 2483
MaeII	ACGT	3 cut(s)	1833, 1897, 2487
MaeIII	GTNAC	7 cut(s)	130, 148, 780, 1052, 1255, 1708, 1855
MboII	GAAGA	4 cut(s)	495, 945, 1421, 2435
MflI	RGATCY	2 cut(s)	1005, 1793
MhlI	GDGCHC	2 cut(s)	72, 2172
MlsI	TGGCCA	1 cut(s)	1248
MluNI	TGGCCA	1 cut(s)	1248
MlyI	GAGTC	3 cut(s)	41, 1510, 1649
MmeI	TCCRAC	6 cut(s)	135, 1141, 1307, 1668, 2182, 2393
Mox20I	TGGCCA	1 cut(s)	1248
MroXI	GAANNNNTTC	1 cut(s)	1605
MscI	TGGCCA	1 cut(s)	1248
MslI	CAYNNNNRTG	4 cut(s)	689, 890, 2163, 2345
Msp20I	TGGCCA	1 cut(s)	1248
MspA1I	CMGCKG	1 cut(s)	2310
MspI	CCGG	7 cut(s)	138, 164, 804, 869, 2029, 2411, 2543
MspR9I	CCNGG	7 cut(s)	59, 805, 869, 1307, 1446, 1611, 2030
Mva1269I	GAATGC	3 cut(s)	730, 845, 1806
MvaI	CCWGG	4 cut(s)	59, 1307, 1446, 1611
MwoI	GCNNNNNNNGC	7 cut(s)	344, 727, 878, 1091, 1721, 2176, 2316
NciI	CCSGG	3 cut(s)	805, 869, 2030
NdeI	CATATG	1 cut(s)	1234
NlaIII	CATG	9 cut(s)	268, 536, 778, 915, 1247, 2162, 2168, 2376, 2388
NlaIV	GGNNCC	4 cut(s)	323, 866, 867, 2415
NmuCI	GTSAC	2 cut(s)	148, 1052
NsbI	TGCGCA	1 cut(s)	1242
NspI	RCATGY	2 cut(s)	268, 2388
NspV	TTCGAA	1 cut(s)	1471
PagI	TCATGA	1 cut(s)	2158
PceI	AGGCCT	1 cut(s)	192
PcsI	WCGNNNNNNNCGW	2 cut(s)	108, 776
PctI	GAATGC	3 cut(s)	730, 845, 1806
PdmI	GAANNNNTTC	1 cut(s)	1605
PfeI	GAWTC	6 cut(s)	160, 944, 950, 1606, 1903, 2285
PflMI	CCANNNNNTGG	1 cut(s)	105
PfoI	TCCNGGA	2 cut(s)	803, 2028
Ple19I	CGATCG	1 cut(s)	311
PleI	GAGTC	3 cut(s)	41, 1510, 1648
PpsI	GAGTC	3 cut(s)	41, 1510, 1648
PpuMI	RGGWCCY	2 cut(s)	865, 2185
PshBI	ATTAAT	1 cut(s)	480
PsiI	TTATAA	1 cut(s)	659
Psp5II	RGGWCCY	2 cut(s)	865, 2185
Psp6I	CCWGG	4 cut(s)	57, 1305, 1444, 1609
PspGI	CCWGG	4 cut(s)	57, 1305, 1444, 1609
PspN4I	GGNNCC	4 cut(s)	323, 866, 867, 2415
PspPI	GGNCC	7 cut(s)	108, 182, 321, 865, 1656, 2185, 2317
PspPPI	RGGWCCY	2 cut(s)	865, 2185
PstI	CTGCAG	3 cut(s)	1304, 1895, 2309
PsuI	RGATCY	2 cut(s)	1005, 1793
PvuI	CGATCG	1 cut(s)	311
RsaI	GTAC	7 cut(s)	834, 988, 1110, 1359, 1505, 1761, 1962
RsaNI	GTAC	7 cut(s)	833, 987, 1109, 1358, 1504, 1760, 1961
RseI	CAYNNNNRTG	4 cut(s)	689, 890, 2163, 2345
Sau96I	GGNCC	7 cut(s)	108, 182, 321, 865, 1656, 2185, 2317
ScaI	AGTACT	3 cut(s)	988, 1761, 1962
SchI	GAGTC	3 cut(s)	41, 1510, 1649
ScrFI	CCNGG	7 cut(s)	59, 805, 869, 1307, 1446, 1611, 2030
SduI	GDGCHC	2 cut(s)	72, 2172
SfaNI	GCATC	7 cut(s)	882, 1081, 1228, 2201, 2279, 2480, 2570
SfcI	CTRYAG	4 cut(s)	978, 1300, 1891, 2305
SfuI	TTCGAA	1 cut(s)	1471
SinI	GGWCC	6 cut(s)	108, 182, 321, 865, 1656, 2185
SmiMI	CAYNNNNRTG	4 cut(s)	689, 890, 2163, 2345
SmlI	CTYRAG	2 cut(s)	759, 1797
SmoI	CTYRAG	2 cut(s)	759, 1797
SpeI	ACTAGT	1 cut(s)	2326
SseBI	AGGCCT	1 cut(s)	192
SsiI	CCGC	5 cut(s)	665, 1802, 1984, 2209, 2310
SspMI	CTAG	5 cut(s)	1013, 1050, 1206, 2327, 2483
StuI	AGGCCT	1 cut(s)	192
StyD4I	CCNGG	7 cut(s)	57, 803, 867, 1305, 1444, 1609, 2028
StyI	CCWWGG	2 cut(s)	376, 624
TaaI	ACNGT	6 cut(s)	67, 877, 1822, 1937, 2015, 2174
TaiI	ACGT	3 cut(s)	1836, 1900, 2490
TaqI	TCGA	5 cut(s)	307, 311, 566, 608, 1471
TatI	WGTACW	4 cut(s)	986, 1108, 1759, 1960
TfiI	GAWTC	6 cut(s)	160, 944, 950, 1606, 1903, 2285
TscAI	CASTG	4 cut(s)	691, 1443, 2020, 2147
TseFI	GTSAC	2 cut(s)	148, 1052
Tsp45I	GTSAC	2 cut(s)	148, 1052
TspDTI	ATGAA	8 cut(s)	495, 549, 900, 1038, 1686, 1773, 1931, 1941
TspRI	CASTG	4 cut(s)	691, 1443, 2020, 2147
Van91I	CCANNNNNTGG	1 cut(s)	105
VneI	GTGCAC	1 cut(s)	2168
VpaK11BI	GGWCC	6 cut(s)	108, 182, 321, 865, 1656, 2185
VspI	ATTAAT	1 cut(s)	480
XapI	RAATTY	7 cut(s)	825, 1146, 1213, 1412, 1948, 2092, 2452
XceI	RCATGY	2 cut(s)	268, 2388
XcmI	CCANNNNNNNNNTGG	1 cut(s)	2106
XmiI	GTMKAC	2 cut(s)	1752, 2521
XmnI	GAANNNNTTC	1 cut(s)	1605
XspI	CTAG	5 cut(s)	1013, 1050, 1206, 2327, 2483
ZrmI	AGTACT	3 cut(s)	988, 1761, 1962

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.