Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0002136.1

Orthogroup ID

OG0009196

Physical Location & Seq

Genomic Coordinates Reverse (-)

4367 .. 10824

Gene Structure 6458 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0002136.1_g000002.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2847 bp

atgtctttctttccctccaattcccaactccaaaccgaaaactcaatttcacgcttccaggccgccgtcctcgtcggtgctccctcctaccccaacgccattgcctggtccgacgagaacctcatcgccgtcgcctccggccacctcgtcaccattctgaatccggcgacactgcctttcggaccaagaggtctcatcactatccaaaacggacctccctttccaattggtgtcatagatagacaagatttgttctctgattgcttgctgcctacgattatctcaagggaccatgaaccctgtgttcgatcaatttcgtggtctccggttgggcttgctccgaatgctggctgcttgctggctgtctgcacaacccaaggacttgtcaagctttaccgcccgccgtattgtgatttctgtgccgaatggatagaggttgcggatttatcagccaagctttatgattatcttgcgagtattagtttcggggaggtaccagattgttctttggtacggtgtgataaccgtgaaatagagcagggtggacaatctgtccctacaaaggagggtaagagacgaaaagcaaacatatctggcaaaagctctagtaacccttattccaaacgctatggacaagaagtgcatacggagcttgacagtgactccgaccagatggaagaaaggagttcaactcagattgttccatcatcaaaatctaaagtaaaatctgtcaagaagatacaagaaaactctaccctccctcaaataactgtggatcaatatgcgactcgtagtgcaatgctatcatcgcttgtagttgcttggtcaccgatactgcaatcacgtgccaaaatcagttcaagtcctcaacatggttcatccctgtctttacttgcagtaggagggaagtcgggtcaagtttctgtatggagagtttctgtaccagagtgttattctgttgaccaaagccgggatccaactacgctgatgctcattcaaatcattcaggcgcacaattcatggatcacagcagttagttgggctttgcttgattctgattcgtcaaatcctcaatttctattggctacagcaagttataatggaagtttgaagatctggctggcatattatgaacaattgctaaagtcatcggaacctaataccacttccttttccttgttaaaggaggttggaactgttgatatggttccagtttcagcgctttcagttactgtgcctgctcagtgtccacagacaatgcacttggcagttggcaaaggttctggcttttgtgaagtgtggatatgcaacatctctggccaaaaatttcataaaattagtccacatgatgggcattcccagattgataattttgtacgtggttggattctaaatggaagttccctgtgtgaagtacctattccttcaaatactcctggtctgagaagctcgactgatcttccagaaggatttgtttcttgctttggtgtggcagtatcccctggaaatgttgcaattgcgtgggttcgtaatactgatgttgatcaattaaatccaatgtatgaggcaaggactcaaaaggccatcgtagagtttttctggatcgggggccagcaagttcatgttttgtcaaacaatttcctggatcgtgatactgaagctattcctggctcttctgagaaggaattggttgattgggaaaccaatattatatggtctttaaagcagtttgaaactcaggataagcctcttgttgtttgggatattgctacagcattattggcatttaggcgttctaaaccagagtatgtagatcgcgtagtgattaagtggctctctgtttcctctctgggatctgagttgaactcttctgctgaaaatgttctgttgtatgcctcccgaaatttttcaaaagtcacttctcgccaactacaccttctcaatataatctgtagacgcgtgatactatcggagatgaaggctgatgagataaacaacaaactgctgaacatggaaggagtggatggtgctgaagaagagcaactgactttgtggatcaatctgcttttgaacagtgaaagagaactccgtgagaggcttgtggggtttacattttcttctttcaaaagtcgaatgcttgcttcagccacaaattctcaatctagagattggtttcctgttgggctgacacaaatggagcagtgggttgagcttaaccaagatcatgtgcaggatcaactgagggtccttgcagcagaagttaggaagcatgagcagaggctccaattgagtaattccatagcagcagagaagtgtagctattgttcagcatcagttccattcgaatctccagaagttgccttctgcagcaaaggacacaaactagcaagagatgcacttgaaactgttggagttgttgtagatgatgaagatgtggtggttacagttctcagaggtttaccagctgaatttgcagccaaaaaaactataatcagagctcaatattgcaactcttcattggcaactctcaagaccctgcttaaagctgcagaagtggacattgagaatgagtctcaaaccaatactaactctaagactagacaactcacttgtgtcgacattaaactcaccaaccagagtcctcctgaccagcattggattgaccaagccaacactcgttgtgacctaaactcaaccaagtggattactggacactcagacctgggactaaaaaaccaacaccatcacctccctattgtcaacactatccatcccccgctgctccaaaatgccctcgcctctgacccgatcccagacaggaaggacccactagaaggccaaggatga

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

TFIIIC_delta WD40 zf-TFIIIC

Protein Analysis

948

Amino Acids

104.71

Weight (kDa)

5.7

Isoelectric Point (pI)

44.05

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0009196)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G49400 AT3G49400 AT3G49400 AT3G49400
fragaria_vesca	FvH4_4g12930
malus_domestica	MD04G1021200.v1.1 MD10G1005500.v1.1 MD10G1005800.v1.1
prunus_persica	Prupe.1G170200_v2.0.a1 Prupe.1G170200_v2.0.a1
pyrus_communis	pycom04g01670
rosa_chinensis	RchiOBHm_Chr4g0412561
rosa_laevigata	RLG00000008274
rosa_multiflora	Rmu_sc0002136.1_g000002 Rmu_sc0033953.1_g000001
rosa_roxburghii	Rroxscaffold_5G00356780
rosa_rugosa	Rorug04G0102900
rosa_samantha	Rh4AG174300 Rh4BG173500 Rh4CG185000 Rh4DG169800
rosa_wichuraiana	Rw4G014600

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1098
AasI	GACNNNNNNGTC	1 cut(s)	189
Acc65I	GGTACC	1 cut(s)	493
AccB1I	GGYRCC	1 cut(s)	493
AccB7I	CCANNNNNTGG	2 cut(s)	105, 1349
AccI	GTMKAC	2 cut(s)	1954, 2616
AccII	CGCG	2 cut(s)	1818, 1959
AciI	CCGC	5 cut(s)	63, 397, 401, 440, 2777
AcoI	YGGCCR	2 cut(s)	139, 1318
AcsI	RAATTY	4 cut(s)	1325, 1903, 2152, 2468
AcuI	CTGAAG	3 cut(s)	1677, 2052, 2127
AcvI	CACGTG	1 cut(s)	845
AfaI	GTAC	5 cut(s)	495, 513, 942, 1377, 1416
AfeI	AGCGCT	1 cut(s)	1221
AfiI	CCNNNNNNNGG	7 cut(s)	105, 347, 562, 872, 970, 1349, 2834
AflIII	ACRYGT	1 cut(s)	1957
AhdI	GACNNNNNGTC	1 cut(s)	551
AjnI	CCWGG	7 cut(s)	57, 104, 1435, 1501, 1641, 1666, 2721
AjuI	GAANNNNNNNTTGG	2 cut(s)	1920, 1952
Alw21I	GWGCWC	2 cut(s)	82, 2500
Alw26I	GTCTC	4 cut(s)	197, 327, 568, 2577
AlwNI	CAGNNNCTG	1 cut(s)	1232
Aor51HI	AGCGCT	1 cut(s)	1221
AoxI	GGCC	6 cut(s)	60, 139, 1318, 1581, 1609, 2836
ApeKI	GCWGC	8 cut(s)	268, 351, 2252, 2303, 2367, 2474, 2546, 2779
ApoI	RAATTY	4 cut(s)	1325, 1903, 2152, 2468
Asp700I	GAANNNNTTC	3 cut(s)	1662, 1881, 1906
Asp718I	GGTACC	1 cut(s)	493
AspLEI	GCGC	2 cut(s)	1012, 1222
AspS9I	GGNCC	7 cut(s)	108, 182, 212, 289, 1609, 2245, 2824
AsuC2I	CCSGG	1 cut(s)	971
AsuHPI	GGTGA	4 cut(s)	142, 819, 2620, 2738
AsuII	TTCGAA	1 cut(s)	2343
AvaII	GGWCC	6 cut(s)	108, 182, 212, 289, 2245, 2824
BalI	TGGCCA	1 cut(s)	1320
BamHI	GGATCC	1 cut(s)	973
BanI	GGYRCC	1 cut(s)	493
BanII	GRGCYC	1 cut(s)	2500
BbrPI	CACGTG	1 cut(s)	845
Bbv12I	GWGCWC	2 cut(s)	82, 2500
BbvI	GCAGC	8 cut(s)	255, 338, 2264, 2315, 2379, 2486, 2533, 2766
BccI	CCATC	7 cut(s)	667, 712, 1343, 1592, 2018, 2751, 2778
BceAI	ACGGC	3 cut(s)	50, 113, 388
BciT130I	CCWGG	7 cut(s)	59, 106, 1437, 1503, 1643, 1668, 2723
BciVI	GTATCC	1 cut(s)	1507
BclI	TGATCA	1 cut(s)	1543
BcnI	CCSGG	1 cut(s)	971
BcoDI	GTCTC	4 cut(s)	197, 327, 568, 2577
BfaI	CTAG	5 cut(s)	606, 2163, 2384, 2598, 2831
BfmI	CTRYAG	5 cut(s)	1086, 1770, 1951, 2365, 2547
BfoI	RGCGCY	1 cut(s)	1223
BfuI	GTATCC	1 cut(s)	1507
BglII	AGATCT	1 cut(s)	1113
BisI	GCNGC	9 cut(s)	63, 269, 352, 2253, 2304, 2368, 2475, 2547, 2780
BlsI	GCNGC	9 cut(s)	64, 270, 353, 2254, 2305, 2369, 2476, 2548, 2781
Bme1390I	CCNGG	8 cut(s)	59, 106, 971, 1437, 1503, 1643, 1668, 2723
Bme18I	GGWCC	6 cut(s)	108, 182, 212, 289, 2245, 2824
BmeRI	GACNNNNNGTC	1 cut(s)	551
BmgT120I	GGNCC	7 cut(s)	108, 182, 212, 289, 1609, 2245, 2824
BmiI	GGNNCC	9 cut(s)	290, 495, 975, 1155, 1209, 1610, 2246, 2282, 2826
BmrFI	CCNGG	8 cut(s)	59, 106, 971, 1437, 1503, 1643, 1668, 2723
BmsI	GCATC	3 cut(s)	978, 2339, 2383
BplI	GAGNNNNNCTC	4 cut(s)	676, 708, 1850, 1882
BpmI	CTGGAG	1 cut(s)	2334
Bpu14I	TTCGAA	1 cut(s)	2343
BpuEI	CTTGAG	2 cut(s)	268, 2513
BpuMI	CCSGG	1 cut(s)	971
BsaAI	YACGTR	2 cut(s)	845, 1379
BsaBI	GATNNNNATC	1 cut(s)	1542
BsaI	GGTCTC	2 cut(s)	197, 327
BsaJI	CCNNGG	4 cut(s)	376, 1501, 2722, 2839
BsaWI	WCCGGW	1 cut(s)	325
BsaXI	ACNNNNNCTCC	4 cut(s)	647, 677, 2403, 2433
Bsc4I	CCNNNNNNNGG	7 cut(s)	105, 347, 562, 872, 970, 1349, 2834
Bse1I	ACTGG	2 cut(s)	1211, 2713
Bse3DI	GCAATG	2 cut(s)	99, 804
Bse8I	GATNNNNATC	1 cut(s)	1542
BseBI	CCWGG	7 cut(s)	59, 106, 1437, 1503, 1643, 1668, 2723
BseDI	CCNNGG	4 cut(s)	376, 1501, 2722, 2839
BseGI	GGATG	3 cut(s)	878, 2029, 2770
BseJI	GATNNNNATC	1 cut(s)	1542
BseLI	CCNNNNNNNGG	7 cut(s)	105, 347, 562, 872, 970, 1349, 2834
BseMI	GCAATG	2 cut(s)	99, 804
BseMII	CTCAG	9 cut(s)	707, 1256, 1433, 1668, 1751, 1848, 2231, 2464, 2730
BseNI	ACTGG	2 cut(s)	1211, 2713
BseXI	GCAGC	8 cut(s)	255, 338, 2264, 2315, 2379, 2486, 2533, 2766
BsgI	GTGCAG	2 cut(s)	352, 2249
Bsh1236I	CGCG	2 cut(s)	1818, 1959
BshFI	GGCC	6 cut(s)	62, 141, 1320, 1583, 1611, 2838
BshNI	GGYRCC	1 cut(s)	493
BsiHKAI	GWGCWC	2 cut(s)	82, 2500
BsiSI	CCGG	4 cut(s)	138, 164, 326, 970
BslFI	GGGAC	3 cut(s)	302, 539, 2739
BslI	CCNNNNNNNGG	7 cut(s)	105, 347, 562, 872, 970, 1349, 2834
BsmAI	GTCTC	4 cut(s)	197, 327, 568, 2577
BsmBI	CGTCTC	1 cut(s)	568
BsmFI	GGGAC	3 cut(s)	302, 539, 2739
BsmI	GAATGC	3 cut(s)	349, 1354, 2139
BsnI	GGCC	6 cut(s)	62, 141, 1320, 1583, 1611, 2838
Bso31I	GGTCTC	2 cut(s)	197, 327
Bsp119I	TTCGAA	1 cut(s)	2343
Bsp1286I	GDGCHC	2 cut(s)	82, 2500
BspACI	CCGC	5 cut(s)	63, 397, 401, 440, 2777
BspANI	GGCC	6 cut(s)	62, 141, 1320, 1583, 1611, 2838
BspCNI	CTCAG	9 cut(s)	706, 1255, 1434, 1669, 1750, 1849, 2232, 2463, 2729
BspFNI	CGCG	2 cut(s)	1818, 1959
BspLI	GGNNCC	9 cut(s)	290, 495, 975, 1155, 1209, 1610, 2246, 2282, 2826
BspMAI	CTGCAG	2 cut(s)	2369, 2551
BspQI	GCTCTTC	2 cut(s)	1678, 2031
BspT104I	TTCGAA	1 cut(s)	2343
BspT107I	GGYRCC	1 cut(s)	493
BspTNI	GGTCTC	2 cut(s)	197, 327
BsrDI	GCAATG	2 cut(s)	99, 804
BsrI	ACTGG	2 cut(s)	1211, 2713
BssECI	CCNNGG	4 cut(s)	376, 1501, 2722, 2839
BssT1I	CCWWGG	2 cut(s)	376, 2839
Bst2UI	CCWGG	7 cut(s)	59, 106, 1437, 1503, 1643, 1668, 2723
Bst4CI	ACNGT	9 cut(s)	516, 527, 659, 772, 1198, 1234, 2075, 2407, 2446
Bst6I	CTCTTC	4 cut(s)	1678, 1873, 2031, 2518
BstAPI	GCANNNNNTGC	1 cut(s)	2393
BstBAI	YACGTR	2 cut(s)	845, 1379
BstBI	TTCGAA	1 cut(s)	2343
BstEII	GGTNACC	1 cut(s)	825
BstF5I	GGATG	3 cut(s)	878, 2029, 2770
BstFNI	CGCG	2 cut(s)	1818, 1959
BstH2I	RGCGCY	1 cut(s)	1223
BstHHI	GCGC	2 cut(s)	1012, 1222
BstMAI	GTCTC	4 cut(s)	197, 327, 568, 2577
BstMWI	GCNNNNNNNGC	6 cut(s)	344, 649, 808, 1781, 2393, 2471
BstNI	CCWGG	7 cut(s)	59, 106, 1437, 1503, 1643, 1668, 2723
BstPI	GGTNACC	1 cut(s)	825
BstSCI	CCNGG	8 cut(s)	57, 104, 969, 1435, 1501, 1641, 1666, 2721
BstSFI	CTRYAG	5 cut(s)	1086, 1770, 1951, 2365, 2547
BstUI	CGCG	2 cut(s)	1818, 1959
BstV1I	GCAGC	8 cut(s)	255, 338, 2264, 2315, 2379, 2486, 2533, 2766
BstX2I	RGATCY	3 cut(s)	973, 1113, 1853
BstYI	RGATCY	3 cut(s)	973, 1113, 1853
BsuI	GTATCC	1 cut(s)	1507
BsuRI	GGCC	6 cut(s)	62, 141, 1320, 1583, 1611, 2838
BtgZI	GCGATG	2 cut(s)	109, 792
BtsCI	GGATG	3 cut(s)	878, 2029, 2770
BtsI	GCAGTG	2 cut(s)	170, 2207
BtsIMutI	CAGTG	5 cut(s)	170, 664, 1250, 2080, 2207
CaiI	CAGNNNCTG	1 cut(s)	1232
CfoI	GCGC	2 cut(s)	1012, 1222
Cfr13I	GGNCC	7 cut(s)	108, 182, 212, 289, 1609, 2245, 2824
CseI	GACGC	1 cut(s)	1965
Csp6I	GTAC	5 cut(s)	494, 512, 941, 1376, 1415
CviAII	CATG	8 cut(s)	293, 872, 1020, 1346, 1622, 2011, 2225, 2270
CviQI	GTAC	5 cut(s)	494, 512, 941, 1376, 1415
DraI	TTTAAA	1 cut(s)	1722
DrdI	GACNNNNNNGTC	1 cut(s)	189
DriI	GACNNNNNGTC	1 cut(s)	551
DseDI	GACNNNNNNGTC	1 cut(s)	189
EaeI	YGGCCR	2 cut(s)	139, 1318
Eam1104I	CTCTTC	4 cut(s)	1678, 1873, 2031, 2518
Eam1105I	GACNNNNNGTC	1 cut(s)	551
EarI	CTCTTC	4 cut(s)	1678, 1873, 2031, 2518
Ecl136II	GAGCTC	1 cut(s)	2498
Eco130I	CCWWGG	2 cut(s)	376, 2839
Eco24I	GRGCYC	1 cut(s)	2500
Eco31I	GGTCTC	2 cut(s)	197, 327
Eco47I	GGWCC	6 cut(s)	108, 182, 212, 289, 2245, 2824
Eco47III	AGCGCT	1 cut(s)	1221
Eco53kI	GAGCTC	1 cut(s)	2498
Eco57I	CTGAAG	3 cut(s)	1677, 2052, 2127
Eco72I	CACGTG	1 cut(s)	845
Eco91I	GGTNACC	1 cut(s)	825
EcoICRI	GAGCTC	1 cut(s)	2498
EcoO109I	RGGNCCY	2 cut(s)	2245, 2824
EcoO65I	GGTNACC	1 cut(s)	825
EcoRII	CCWGG	7 cut(s)	57, 104, 1435, 1501, 1641, 1666, 2721
EcoT14I	CCWWGG	2 cut(s)	376, 2839
EcoT38I	GRGCYC	1 cut(s)	2500
ErhI	CCWWGG	2 cut(s)	376, 2839
Esp3I	CGTCTC	1 cut(s)	568
FaeI	CATG	8 cut(s)	296, 875, 1023, 1349, 1625, 2014, 2228, 2273
FaqI	GGGAC	3 cut(s)	302, 539, 2739
FatI	CATG	8 cut(s)	292, 871, 1019, 1345, 1621, 2010, 2224, 2269
FauI	CCCGC	2 cut(s)	408, 2784
FbaI	TGATCA	1 cut(s)	1543
FblI	GTMKAC	2 cut(s)	1954, 2616
Fnu4HI	GCNGC	9 cut(s)	63, 269, 352, 2253, 2304, 2368, 2475, 2547, 2780
FokI	GGATG	3 cut(s)	865, 2036, 2757
FriOI	GRGCYC	1 cut(s)	2500
Fsp4HI	GCNGC	9 cut(s)	63, 269, 352, 2253, 2304, 2368, 2475, 2547, 2780
FspBI	CTAG	5 cut(s)	606, 2163, 2384, 2598, 2831
GlaI	GCGC	2 cut(s)	1011, 1221
GluI	GCNGC	9 cut(s)	63, 269, 352, 2253, 2304, 2368, 2475, 2547, 2780
GsuI	CTGGAG	1 cut(s)	2334
HaeII	RGCGCY	1 cut(s)	1223
HaeIII	GGCC	6 cut(s)	62, 141, 1320, 1583, 1611, 2838
HapII	CCGG	4 cut(s)	138, 164, 326, 970
HgaI	GACGC	1 cut(s)	1965
HhaI	GCGC	2 cut(s)	1012, 1222
Hin1II	CATG	8 cut(s)	296, 875, 1023, 1349, 1625, 2014, 2228, 2273
Hin6I	GCGC	2 cut(s)	1010, 1220
HinP1I	GCGC	2 cut(s)	1010, 1220
HincII	GTYRAC	3 cut(s)	961, 2617, 2761
HindII	GTYRAC	3 cut(s)	961, 2617, 2761
HindIII	AAGCTT	2 cut(s)	389, 455
HpaII	CCGG	4 cut(s)	138, 164, 326, 970
HphI	GGTGA	4 cut(s)	142, 819, 2620, 2738
Hpy99I	CGWCG	3 cut(s)	77, 116, 134
HpyAV	CCTTC	9 cut(s)	1434, 1460, 1675, 1946, 1972, 2009, 2371, 2815, 2828
HpyCH4III	ACNGT	9 cut(s)	516, 527, 659, 772, 1198, 1234, 2075, 2407, 2446
HpyCH4IV	ACGT	2 cut(s)	844, 1378
HpyF10VI	GCNNNNNNNGC	6 cut(s)	344, 649, 808, 1781, 2393, 2471
HpySE526I	ACGT	2 cut(s)	844, 1378
Hsp92II	CATG	8 cut(s)	296, 875, 1023, 1349, 1625, 2014, 2228, 2273
HspAI	GCGC	2 cut(s)	1010, 1220
KpnI	GGTACC	1 cut(s)	497
Ksp22I	TGATCA	1 cut(s)	1543
LguI	GCTCTTC	2 cut(s)	1678, 2031
LmnI	GCTCC	6 cut(s)	85, 343, 649, 2197, 2286, 2787
Lsp1109I	GCAGC	8 cut(s)	255, 338, 2264, 2315, 2379, 2486, 2533, 2766
LweI	GCATC	3 cut(s)	978, 2339, 2383
MaeI	CTAG	5 cut(s)	606, 2163, 2384, 2598, 2831
MaeII	ACGT	2 cut(s)	844, 1378
MaeIII	GTNAC	8 cut(s)	148, 608, 659, 825, 1228, 1915, 2440, 2681
MfeI	CAATTG	4 cut(s)	225, 1136, 1515, 2285
MflI	RGATCY	3 cut(s)	973, 1113, 1853
MhlI	GDGCHC	2 cut(s)	82, 2500
MlsI	TGGCCA	1 cut(s)	1320
MluI	ACGCGT	1 cut(s)	1957
MluNI	TGGCCA	1 cut(s)	1320
MlyI	GAGTC	5 cut(s)	656, 781, 1567, 2579, 2647
MmeI	TCCRAC	6 cut(s)	135, 690, 1001, 1171, 1364, 2389
Mox20I	TGGCCA	1 cut(s)	1320
MroXI	GAANNNNTTC	3 cut(s)	1662, 1881, 1906
MscI	TGGCCA	1 cut(s)	1320
MseI	TTAA	7 cut(s)	1181, 1550, 1721, 1827, 2214, 2541, 2622
Msp20I	TGGCCA	1 cut(s)	1320
MspA1I	CMGCKG	2 cut(s)	2465, 2779
MspI	CCGG	4 cut(s)	138, 164, 326, 970
MspR9I	CCNGG	8 cut(s)	59, 106, 971, 1437, 1503, 1643, 1668, 2723
MunI	CAATTG	4 cut(s)	225, 1136, 1515, 2285
Mva1269I	GAATGC	3 cut(s)	349, 1354, 2139
MvaI	CCWGG	7 cut(s)	59, 106, 1437, 1503, 1643, 1668, 2723
MvnI	CGCG	2 cut(s)	1818, 1959
MwoI	GCNNNNNNNGC	6 cut(s)	344, 649, 808, 1781, 2393, 2471
NciI	CCSGG	1 cut(s)	971
NlaIII	CATG	8 cut(s)	296, 875, 1023, 1349, 1625, 2014, 2228, 2273
NlaIV	GGNNCC	9 cut(s)	290, 495, 975, 1155, 1209, 1610, 2246, 2282, 2826
NmuCI	GTSAC	5 cut(s)	148, 659, 825, 1915, 2681
NspV	TTCGAA	1 cut(s)	2343
PciSI	GCTCTTC	2 cut(s)	1678, 2031
PctI	GAATGC	3 cut(s)	349, 1354, 2139
PdmI	GAANNNNTTC	3 cut(s)	1662, 1881, 1906
PfeI	GAWTC	5 cut(s)	160, 1052, 1058, 1387, 2345
PflMI	CCANNNNNTGG	2 cut(s)	105, 1349
PfoI	TCCNGGA	1 cut(s)	1641
PkrI	GCNGC	9 cut(s)	64, 270, 353, 2254, 2305, 2369, 2476, 2548, 2781
PleI	GAGTC	5 cut(s)	656, 781, 1567, 2578, 2646
PmaCI	CACGTG	1 cut(s)	845
PmlI	CACGTG	1 cut(s)	845
PpsI	GAGTC	5 cut(s)	656, 781, 1567, 2578, 2646
Ppu21I	YACGTR	2 cut(s)	845, 1379
PpuMI	RGGWCCY	2 cut(s)	2245, 2824
PsiI	TTATAA	1 cut(s)	1098
Psp124BI	GAGCTC	1 cut(s)	2500
Psp5II	RGGWCCY	2 cut(s)	2245, 2824
Psp6I	CCWGG	7 cut(s)	57, 104, 1435, 1501, 1641, 1666, 2721
PspCI	CACGTG	1 cut(s)	845
PspEI	GGTNACC	1 cut(s)	825
PspGI	CCWGG	7 cut(s)	57, 104, 1435, 1501, 1641, 1666, 2721
PspN4I	GGNNCC	9 cut(s)	290, 495, 975, 1155, 1209, 1610, 2246, 2282, 2826
PspPI	GGNCC	7 cut(s)	108, 182, 212, 289, 1609, 2245, 2824
PspPPI	RGGWCCY	2 cut(s)	2245, 2824
PsrI	GAACNNNNNNTAC	2 cut(s)	2308, 2340
PstI	CTGCAG	2 cut(s)	2369, 2551
PstNI	CAGNNNCTG	1 cut(s)	1232
PsuI	RGATCY	3 cut(s)	973, 1113, 1853
PvuII	CAGCTG	1 cut(s)	2465
RsaI	GTAC	5 cut(s)	495, 513, 942, 1377, 1416
RsaNI	GTAC	5 cut(s)	494, 512, 941, 1376, 1415
SacI	GAGCTC	1 cut(s)	2500
SalI	GTCGAC	1 cut(s)	2615
SapI	GCTCTTC	2 cut(s)	1678, 2031
SaqAI	TTAA	7 cut(s)	1181, 1550, 1721, 1827, 2214, 2541, 2622
SatI	GCNGC	9 cut(s)	63, 269, 352, 2253, 2304, 2368, 2475, 2547, 2780
Sau96I	GGNCC	7 cut(s)	108, 182, 212, 289, 1609, 2245, 2824
SchI	GAGTC	5 cut(s)	656, 781, 1567, 2579, 2647
ScrFI	CCNGG	8 cut(s)	59, 106, 971, 1437, 1503, 1643, 1668, 2723
SduI	GDGCHC	2 cut(s)	82, 2500
SfaNI	GCATC	3 cut(s)	978, 2339, 2383
SfcI	CTRYAG	5 cut(s)	1086, 1770, 1951, 2365, 2547
SfuI	TTCGAA	1 cut(s)	2343
SinI	GGWCC	6 cut(s)	108, 182, 212, 289, 2245, 2824
SmlI	CTYRAG	2 cut(s)	283, 2528
SmoI	CTYRAG	2 cut(s)	283, 2528
SsiI	CCGC	5 cut(s)	63, 397, 401, 440, 2777
SspI	AATATT	2 cut(s)	1708, 2504
SspMI	CTAG	5 cut(s)	606, 2163, 2384, 2598, 2831
SstI	GAGCTC	1 cut(s)	2500
StyD4I	CCNGG	8 cut(s)	57, 104, 969, 1435, 1501, 1641, 1666, 2721
StyI	CCWWGG	2 cut(s)	376, 2839
TaaI	ACNGT	9 cut(s)	516, 527, 659, 772, 1198, 1234, 2075, 2407, 2446
TaiI	ACGT	2 cut(s)	847, 1381
TaqI	TCGA	5 cut(s)	307, 1451, 2131, 2343, 2616
TauI	GCSGC	1 cut(s)	65
TfiI	GAWTC	5 cut(s)	160, 1052, 1058, 1387, 2345
Tru1I	TTAA	7 cut(s)	1181, 1550, 1721, 1827, 2214, 2541, 2622
Tru9I	TTAA	7 cut(s)	1181, 1550, 1721, 1827, 2214, 2541, 2622
TscAI	CASTG	5 cut(s)	177, 664, 1250, 2080, 2207
TseFI	GTSAC	5 cut(s)	148, 659, 825, 1915, 2681
TseI	GCWGC	8 cut(s)	268, 351, 2252, 2303, 2367, 2474, 2546, 2779
Tsp45I	GTSAC	5 cut(s)	148, 659, 825, 1915, 2681
TspDTI	ATGAA	9 cut(s)	309, 867, 1008, 1146, 1319, 1610, 1991, 2442, 2505
TspGWI	ACGGA	3 cut(s)	225, 662, 2078
TspRI	CASTG	5 cut(s)	177, 664, 1250, 2080, 2207
Van91I	CCANNNNNTGG	2 cut(s)	105, 1349
VpaK11BI	GGWCC	6 cut(s)	108, 182, 212, 289, 2245, 2824
XapI	RAATTY	4 cut(s)	1325, 1903, 2152, 2468
XbaI	TCTAGA	1 cut(s)	2162
XmiI	GTMKAC	2 cut(s)	1954, 2616
XmnI	GAANNNNTTC	3 cut(s)	1662, 1881, 1906
XspI	CTAG	5 cut(s)	606, 2163, 2384, 2598, 2831

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.