Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0033953.1

Orthogroup ID

OG0009196

Physical Location & Seq

Genomic Coordinates Forward (+)

1 .. 4788

Gene Structure 4788 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0033953.1_g000001.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2393 bp

tttatgtggtagatttgttctctgattgcttgctgcctacgattatctcaagggaccatgaaccctgtgttcgatcaatttcgtggtctccggttgggcttgctccgaatgctggctgcttgctggctgtctgcacaacccaaggacttgtcaagctttaccgcccgccgtattgtgatttctgtgccgaatggatagaggttgcggatttatcagccaagctttatgattatcttgcgagtattagtttcggggaggtaccagattgttctttggtacggtgtgataaccgtgaaatagagcagggtggacaatctgtccctacaaaggagggtaagagacgaaaagcaaacatatctggcaaaagctctagtaacccttattccaaacgctatggacaagaagtgcatacggagcttgacagtgactccgaccagatggaagaaaggagttcaactcagattgttccatcatcaaaatctaaagtaaaatctgtcaagaagatacaagaaaactctaccctccctcaaataactgtggatcaatatgctactcgtagtgcaatgctatcatcgctcgtagttgcttggtcaccgatactgcaatcacgtgccaaaatcagttcaagtcctcaacatggttcatccctgtctttacttgcagtaggagggaagtcgggtcaagtttctgtatggagagtttctgtaccagagtgttattctgttgaccaaagccgggatccaactacgctgatgctcattcaaatcattcaggcgcacaattcatggatcacagcagttagttgggctttgcttgattctgattcgtcaaatcctcaatttctattggctacagcaagttataatggaagtttgaagatctggctggcatattatgaacaattgctaaagtcatcggaacctaataccacttccttttccttgttaaaggaggttggaactgttgatatggttccagtttcagcgctttcagttactgtgcctgctcagtgtccacagacaatgcacttggcagttggcaaaggttctggcttttgtgaagtgtggatatgcaacatctctggccaaaaatttcataaaattagtccacatgatgggcattcccagattgttacaggtttagcttgggcttttgatgggaaaattttgtacagcagcagccaggataattttgtacgtggttggattctaaatggaagttccctgtgtgaagtacctattccttcaaatactcctggtctgagaagctcgactgatcttccagaaggatttgtttcttgctttggtgtggcagtatcccctggaaatgttgcaattgcgtgggttcgtaatactgatgttgatcaattaaatccaatgtatgaggcaaggactcaaaaggccatcgtagagtttttctggatcgggggccagcaagttcatgttttgtcaaacaatttcctggatcgtgatactgaagctattcctggctcttctgagaaggaattggttgattgggaaaccaatattatatggtctttaaagcagtttgaaactcaggataagcctcttgttgtttgggatattgctacagcattattggcatttaggcgttctaaaccagagtatgtagatcgcgtagtgattaagtggctctctgtttcctctctgggatctgagttgaactcttctgctgaaaatgttctgttgtatgcctcccgaaatttttcaaaagtcacttctcgccaactacaccttctcaatataatctgtagacgcgtgatactatcggagatgaaggctgatgagataaacaacaaactgctgaacatggaaggagtggatggtgctgaagaagagcaactgactttgtggatcaatctgcttttgaacagtgaaagagaactccgtgagaggcttgtggggtttacattttcttctttcaaaagtcgaatgcttgcttcagccacaaattctcaatctagagattggtttcctgttgggctgacacaaatggagcagtgggttgagcttaaccaagatcatgtgcaggatcaactgagggtccttgcagcagaagttaggaagcatgagcagaggctccaattgagtaattccatagcagcagagaagtgtagctattgttcagcatcagttccattcgaatctccagaagttgccttctgcagcaaaggacacaaactagcaaggtgtgccgtttctatggtggtttgtcctaccactcccatatggttttgcatgtgttgtcatagacgagctctcaaaatggcgccagagactctatttgcaatccctggtccacagtgtcccttctgcgggatactgctgcagagactacaaccggattttctactttctgcatcaccgacttaa

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

TFIIIC_delta WD40 zf-TFIIIC

Protein Analysis

796

Amino Acids

88.28

Weight (kDa)

6.04

Isoelectric Point (pI)

49.88

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0009196)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G49400 AT3G49400 AT3G49400 AT3G49400
fragaria_vesca	FvH4_4g12930
malus_domestica	MD04G1021200.v1.1 MD10G1005500.v1.1 MD10G1005800.v1.1
prunus_persica	Prupe.1G170200_v2.0.a1 Prupe.1G170200_v2.0.a1
pyrus_communis	pycom04g01670
rosa_chinensis	RchiOBHm_Chr4g0412561
rosa_laevigata	RLG00000008274
rosa_multiflora	Rmu_sc0002136.1_g000002 Rmu_sc0033953.1_g000001
rosa_roxburghii	Rroxscaffold_5G00356780
rosa_rugosa	Rorug04G0102900
rosa_samantha	Rh4AG174300 Rh4BG173500 Rh4CG185000 Rh4DG169800
rosa_wichuraiana	Rw4G014600

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	863
Acc65I	GGTACC	1 cut(s)	258
AccB1I	GGYRCC	2 cut(s)	258, 2289
AccB7I	CCANNNNNTGG	1 cut(s)	1114
AccI	GTMKAC	1 cut(s)	1773
AccII	CGCG	2 cut(s)	1637, 1778
AciI	CCGC	4 cut(s)	162, 166, 205, 2336
AclWI	GGATC	9 cut(s)	548, 733, 746, 796, 1429, 1472, 1680, 1882, 2060
AcoI	YGGCCR	1 cut(s)	1083
AcsI	RAATTY	4 cut(s)	1090, 1163, 1722, 1971
AcuI	CTGAAG	3 cut(s)	1496, 1871, 1946
AcvI	CACGTG	1 cut(s)	610
AcyI	GRCGYC	1 cut(s)	2290
AfaI	GTAC	6 cut(s)	260, 278, 707, 1171, 1196, 1235
AfeI	AGCGCT	1 cut(s)	986
AfiI	CCNNNNNNNGG	7 cut(s)	112, 327, 637, 735, 1114, 2335, 2336
AflIII	ACRYGT	1 cut(s)	1776
AhdI	GACNNNNNGTC	1 cut(s)	316
AjnI	CCWGG	6 cut(s)	1181, 1254, 1320, 1460, 1485, 2313
AjuI	GAANNNNNNNTTGG	2 cut(s)	1739, 1771
Alw21I	GWGCWC	1 cut(s)	2280
Alw26I	GTCTC	4 cut(s)	92, 333, 2290, 2346
AlwI	GGATC	9 cut(s)	548, 733, 746, 796, 1429, 1472, 1680, 1882, 2060
AlwNI	CAGNNNCTG	1 cut(s)	997
Aor51HI	AGCGCT	1 cut(s)	986
AoxI	GGCC	3 cut(s)	1083, 1400, 1428
ApeKI	GCWGC	8 cut(s)	33, 116, 1175, 1178, 2071, 2122, 2186, 2346
ApoI	RAATTY	4 cut(s)	1090, 1163, 1722, 1971
Asp700I	GAANNNNTTC	3 cut(s)	1481, 1700, 1725
Asp718I	GGTACC	1 cut(s)	258
AspLEI	GCGC	3 cut(s)	777, 987, 2292
AspS9I	GGNCC	4 cut(s)	54, 1428, 2064, 2317
AsuC2I	CCSGG	1 cut(s)	736
AsuHPI	GGTGA	2 cut(s)	584, 2375
AsuII	TTCGAA	1 cut(s)	2162
AvaII	GGWCC	3 cut(s)	54, 2064, 2317
BalI	TGGCCA	1 cut(s)	1085
BamHI	GGATCC	1 cut(s)	738
BanI	GGYRCC	2 cut(s)	258, 2289
BanII	GRGCYC	1 cut(s)	2280
BbrPI	CACGTG	1 cut(s)	610
Bbv12I	GWGCWC	1 cut(s)	2280
BbvI	GCAGC	8 cut(s)	20, 103, 1187, 1190, 2083, 2134, 2198, 2333
BccI	CCATC	6 cut(s)	432, 477, 1108, 1150, 1411, 1837
BceAI	ACGGC	2 cut(s)	153, 2200
BciT130I	CCWGG	6 cut(s)	1183, 1256, 1322, 1462, 1487, 2315
BciVI	GTATCC	2 cut(s)	1326, 2333
BclI	TGATCA	1 cut(s)	1362
BcnI	CCSGG	1 cut(s)	736
BcoDI	GTCTC	4 cut(s)	92, 333, 2290, 2346
BfaI	CTAG	3 cut(s)	371, 1982, 2203
BfmI	CTRYAG	5 cut(s)	851, 1589, 1770, 2184, 2347
BfoI	RGCGCY	2 cut(s)	988, 2293
BfuI	GTATCC	2 cut(s)	1326, 2333
BglII	AGATCT	1 cut(s)	878
BisI	GCNGC	8 cut(s)	34, 117, 1176, 1179, 2072, 2123, 2187, 2347
BlsI	GCNGC	8 cut(s)	35, 118, 1177, 1180, 2073, 2124, 2188, 2348
Bme1390I	CCNGG	7 cut(s)	736, 1183, 1256, 1322, 1462, 1487, 2315
Bme18I	GGWCC	3 cut(s)	54, 2064, 2317
BmeRI	GACNNNNNGTC	1 cut(s)	316
BmgT120I	GGNCC	4 cut(s)	54, 1428, 2064, 2317
BmiI	GGNNCC	9 cut(s)	55, 260, 740, 920, 974, 1429, 2065, 2101, 2291
BmrFI	CCNGG	7 cut(s)	736, 1183, 1256, 1322, 1462, 1487, 2315
BmsI	GCATC	3 cut(s)	743, 2158, 2389
BplI	GAGNNNNNCTC	4 cut(s)	441, 473, 1669, 1701
BpmI	CTGGAG	1 cut(s)	2153
Bpu14I	TTCGAA	1 cut(s)	2162
BpuEI	CTTGAG	1 cut(s)	33
BpuMI	CCSGG	1 cut(s)	736
BsaAI	YACGTR	2 cut(s)	610, 1198
BsaBI	GATNNNNATC	1 cut(s)	1361
BsaHI	GRCGYC	1 cut(s)	2290
BsaI	GGTCTC	1 cut(s)	92
BsaJI	CCNNGG	3 cut(s)	141, 1320, 2313
BsaWI	WCCGGW	2 cut(s)	90, 2361
BsaXI	ACNNNNNCTCC	2 cut(s)	412, 442
Bsc4I	CCNNNNNNNGG	7 cut(s)	112, 327, 637, 735, 1114, 2335, 2336
Bse1I	ACTGG	1 cut(s)	976
Bse3DI	GCAATG	1 cut(s)	569
Bse8I	GATNNNNATC	1 cut(s)	1361
BseBI	CCWGG	6 cut(s)	1183, 1256, 1322, 1462, 1487, 2315
BseDI	CCNNGG	3 cut(s)	141, 1320, 2313
BseGI	GGATG	2 cut(s)	643, 1848
BseJI	GATNNNNATC	1 cut(s)	1361
BseLI	CCNNNNNNNGG	7 cut(s)	112, 327, 637, 735, 1114, 2335, 2336
BseMI	GCAATG	1 cut(s)	569
BseMII	CTCAG	7 cut(s)	472, 1021, 1252, 1487, 1570, 1667, 2050
BseNI	ACTGG	1 cut(s)	976
BseXI	GCAGC	8 cut(s)	20, 103, 1187, 1190, 2083, 2134, 2198, 2333
BsgI	GTGCAG	2 cut(s)	117, 2068
Bsh1236I	CGCG	2 cut(s)	1637, 1778
BshFI	GGCC	3 cut(s)	1085, 1402, 1430
BshNI	GGYRCC	2 cut(s)	258, 2289
BsiHKAI	GWGCWC	1 cut(s)	2280
BsiSI	CCGG	3 cut(s)	91, 735, 2362
BslFI	GGGAC	3 cut(s)	67, 304, 2312
BslI	CCNNNNNNNGG	7 cut(s)	112, 327, 637, 735, 1114, 2335, 2336
BsmAI	GTCTC	4 cut(s)	92, 333, 2290, 2346
BsmBI	CGTCTC	1 cut(s)	333
BsmFI	GGGAC	3 cut(s)	67, 304, 2312
BsmI	GAATGC	3 cut(s)	114, 1119, 1958
BsnI	GGCC	3 cut(s)	1085, 1402, 1430
Bso31I	GGTCTC	1 cut(s)	92
Bsp119I	TTCGAA	1 cut(s)	2162
Bsp1286I	GDGCHC	1 cut(s)	2280
Bsp1407I	TGTACA	1 cut(s)	1169
BspACI	CCGC	4 cut(s)	162, 166, 205, 2336
BspANI	GGCC	3 cut(s)	1085, 1402, 1430
BspCNI	CTCAG	7 cut(s)	471, 1020, 1253, 1488, 1569, 1668, 2051
BspFNI	CGCG	2 cut(s)	1637, 1778
BspLI	GGNNCC	9 cut(s)	55, 260, 740, 920, 974, 1429, 2065, 2101, 2291
BspMAI	CTGCAG	2 cut(s)	2188, 2351
BspPI	GGATC	9 cut(s)	548, 733, 746, 796, 1429, 1472, 1680, 1882, 2060
BspQI	GCTCTTC	2 cut(s)	1497, 1850
BspT104I	TTCGAA	1 cut(s)	2162
BspT107I	GGYRCC	2 cut(s)	258, 2289
BspTNI	GGTCTC	1 cut(s)	92
BsrDI	GCAATG	1 cut(s)	569
BsrGI	TGTACA	1 cut(s)	1169
BsrI	ACTGG	1 cut(s)	976
BssECI	CCNNGG	3 cut(s)	141, 1320, 2313
BssNI	GRCGYC	1 cut(s)	2290
BssT1I	CCWWGG	1 cut(s)	141
Bst2UI	CCWGG	6 cut(s)	1183, 1256, 1322, 1462, 1487, 2315
Bst4CI	ACNGT	8 cut(s)	281, 292, 424, 537, 963, 999, 1894, 2324
Bst6I	CTCTTC	3 cut(s)	1497, 1692, 1850
BstACI	GRCGYC	1 cut(s)	2290
BstAPI	GCANNNNNTGC	1 cut(s)	2212
BstAUI	TGTACA	1 cut(s)	1169
BstBAI	YACGTR	2 cut(s)	610, 1198
BstBI	TTCGAA	1 cut(s)	2162
BstDEI	CTNAG	7 cut(s)	458, 1007, 1261, 1496, 1556, 1676, 2059
BstEII	GGTNACC	1 cut(s)	590
BstF5I	GGATG	2 cut(s)	643, 1848
BstFNI	CGCG	2 cut(s)	1637, 1778
BstH2I	RGCGCY	2 cut(s)	988, 2293
BstHHI	GCGC	3 cut(s)	777, 987, 2292
BstMAI	GTCTC	4 cut(s)	92, 333, 2290, 2346
BstMWI	GCNNNNNNNGC	5 cut(s)	109, 414, 573, 1600, 2212
BstNI	CCWGG	6 cut(s)	1183, 1256, 1322, 1462, 1487, 2315
BstNSI	RCATGY	1 cut(s)	2262
BstPI	GGTNACC	1 cut(s)	590
BstSCI	CCNGG	7 cut(s)	734, 1181, 1254, 1320, 1460, 1485, 2313
BstSFI	CTRYAG	5 cut(s)	851, 1589, 1770, 2184, 2347
BstUI	CGCG	2 cut(s)	1637, 1778
BstV1I	GCAGC	8 cut(s)	20, 103, 1187, 1190, 2083, 2134, 2198, 2333
BstX2I	RGATCY	3 cut(s)	738, 878, 1672
BstYI	RGATCY	3 cut(s)	738, 878, 1672
BsuI	GTATCC	2 cut(s)	1326, 2333
BsuRI	GGCC	3 cut(s)	1085, 1402, 1430
BtgZI	GCGATG	1 cut(s)	557
BtsCI	GGATG	2 cut(s)	643, 1848
BtsI	GCAGTG	1 cut(s)	2026
BtsIMutI	CAGTG	5 cut(s)	429, 1015, 1899, 2026, 2329
CaiI	CAGNNNCTG	1 cut(s)	997
CfoI	GCGC	3 cut(s)	777, 987, 2292
Cfr13I	GGNCC	4 cut(s)	54, 1428, 2064, 2317
CseI	GACGC	1 cut(s)	1784
Csp6I	GTAC	6 cut(s)	259, 277, 706, 1170, 1195, 1234
CviAII	CATG	9 cut(s)	58, 637, 785, 1111, 1441, 1830, 2044, 2089, 2259
CviQI	GTAC	6 cut(s)	259, 277, 706, 1170, 1195, 1234
DdeI	CTNAG	7 cut(s)	458, 1007, 1261, 1496, 1556, 1676, 2059
DinI	GGCGCC	1 cut(s)	2291
DraI	TTTAAA	1 cut(s)	1541
DriI	GACNNNNNGTC	1 cut(s)	316
EaeI	YGGCCR	1 cut(s)	1083
Eam1104I	CTCTTC	3 cut(s)	1497, 1692, 1850
Eam1105I	GACNNNNNGTC	1 cut(s)	316
EarI	CTCTTC	3 cut(s)	1497, 1692, 1850
Ecl136II	GAGCTC	1 cut(s)	2278
Eco130I	CCWWGG	1 cut(s)	141
Eco24I	GRGCYC	1 cut(s)	2280
Eco31I	GGTCTC	1 cut(s)	92
Eco47I	GGWCC	3 cut(s)	54, 2064, 2317
Eco47III	AGCGCT	1 cut(s)	986
Eco53kI	GAGCTC	1 cut(s)	2278
Eco57I	CTGAAG	3 cut(s)	1496, 1871, 1946
Eco72I	CACGTG	1 cut(s)	610
Eco91I	GGTNACC	1 cut(s)	590
EcoICRI	GAGCTC	1 cut(s)	2278
EcoO109I	RGGNCCY	1 cut(s)	2064
EcoO65I	GGTNACC	1 cut(s)	590
EcoRII	CCWGG	6 cut(s)	1181, 1254, 1320, 1460, 1485, 2313
EcoT14I	CCWWGG	1 cut(s)	141
EcoT38I	GRGCYC	1 cut(s)	2280
EgeI	GGCGCC	1 cut(s)	2291
EheI	GGCGCC	1 cut(s)	2291
ErhI	CCWWGG	1 cut(s)	141
Esp3I	CGTCTC	1 cut(s)	333
FaeI	CATG	9 cut(s)	61, 640, 788, 1114, 1444, 1833, 2047, 2092, 2262
FaqI	GGGAC	3 cut(s)	67, 304, 2312
FatI	CATG	9 cut(s)	57, 636, 784, 1110, 1440, 1829, 2043, 2088, 2258
FauI	CCCGC	2 cut(s)	173, 2329
FauNDI	CATATG	1 cut(s)	2248
FbaI	TGATCA	1 cut(s)	1362
FblI	GTMKAC	1 cut(s)	1773
Fnu4HI	GCNGC	8 cut(s)	34, 117, 1176, 1179, 2072, 2123, 2187, 2347
FokI	GGATG	2 cut(s)	630, 1855
FriOI	GRGCYC	1 cut(s)	2280
Fsp4HI	GCNGC	8 cut(s)	34, 117, 1176, 1179, 2072, 2123, 2187, 2347
FspBI	CTAG	3 cut(s)	371, 1982, 2203
GlaI	GCGC	3 cut(s)	776, 986, 2291
GluI	GCNGC	8 cut(s)	34, 117, 1176, 1179, 2072, 2123, 2187, 2347
GsuI	CTGGAG	1 cut(s)	2153
HaeII	RGCGCY	2 cut(s)	988, 2293
HaeIII	GGCC	3 cut(s)	1085, 1402, 1430
HapII	CCGG	3 cut(s)	91, 735, 2362
HgaI	GACGC	1 cut(s)	1784
HhaI	GCGC	3 cut(s)	777, 987, 2292
Hin1I	GRCGYC	1 cut(s)	2290
Hin1II	CATG	9 cut(s)	61, 640, 788, 1114, 1444, 1833, 2047, 2092, 2262
Hin6I	GCGC	3 cut(s)	775, 985, 2290
HinP1I	GCGC	3 cut(s)	775, 985, 2290
HincII	GTYRAC	1 cut(s)	726
HindII	GTYRAC	1 cut(s)	726
HindIII	AAGCTT	2 cut(s)	154, 220
HinfI	GANTC	7 cut(s)	427, 817, 823, 1206, 1392, 2164, 2298
HpaII	CCGG	3 cut(s)	91, 735, 2362
HphI	GGTGA	2 cut(s)	584, 2375
Hpy166II	GTNNAC	7 cut(s)	310, 726, 1015, 1108, 1774, 1928, 2320
Hpy188III	TCNNGA	8 cut(s)	498, 1282, 1419, 1468, 1558, 1718, 1982, 2170
Hpy8I	GTNNAC	7 cut(s)	310, 726, 1015, 1108, 1774, 1928, 2320
HpyAV	CCTTC	8 cut(s)	1253, 1279, 1494, 1765, 1791, 1828, 2190, 2340
HpyCH4III	ACNGT	8 cut(s)	281, 292, 424, 537, 963, 999, 1894, 2324
HpyCH4IV	ACGT	2 cut(s)	609, 1197
HpyF10VI	GCNNNNNNNGC	5 cut(s)	109, 414, 573, 1600, 2212
HpyF3I	CTNAG	7 cut(s)	458, 1007, 1261, 1496, 1556, 1676, 2059
HpySE526I	ACGT	2 cut(s)	609, 1197
Hsp92I	GRCGYC	1 cut(s)	2290
Hsp92II	CATG	9 cut(s)	61, 640, 788, 1114, 1444, 1833, 2047, 2092, 2262
HspAI	GCGC	3 cut(s)	775, 985, 2290
KasI	GGCGCC	1 cut(s)	2289
KpnI	GGTACC	1 cut(s)	262
Ksp22I	TGATCA	1 cut(s)	1362
LguI	GCTCTTC	2 cut(s)	1497, 1850
LmnI	GCTCC	4 cut(s)	108, 414, 2016, 2105
Lsp1109I	GCAGC	8 cut(s)	20, 103, 1187, 1190, 2083, 2134, 2198, 2333
LweI	GCATC	3 cut(s)	743, 2158, 2389
MaeI	CTAG	3 cut(s)	371, 1982, 2203
MaeII	ACGT	2 cut(s)	609, 1197
MaeIII	GTNAC	6 cut(s)	373, 424, 590, 993, 1131, 1734
MboII	GAAGA	9 cut(s)	454, 513, 888, 1270, 1484, 1679, 1864, 1867, 1928
MfeI	CAATTG	3 cut(s)	901, 1334, 2104
MflI	RGATCY	3 cut(s)	738, 878, 1672
MhlI	GDGCHC	1 cut(s)	2280
MlsI	TGGCCA	1 cut(s)	1085
MluI	ACGCGT	1 cut(s)	1776
MluNI	TGGCCA	1 cut(s)	1085
Mly113I	GGCGCC	1 cut(s)	2290
MlyI	GAGTC	3 cut(s)	421, 1386, 2292
MmeI	TCCRAC	4 cut(s)	455, 766, 936, 1183
Mox20I	TGGCCA	1 cut(s)	1085
MroXI	GAANNNNTTC	3 cut(s)	1481, 1700, 1725
MscI	TGGCCA	1 cut(s)	1085
MseI	TTAA	6 cut(s)	946, 1369, 1540, 1646, 2033, 2391
Msp20I	TGGCCA	1 cut(s)	1085
MspI	CCGG	3 cut(s)	91, 735, 2362
MspR9I	CCNGG	7 cut(s)	736, 1183, 1256, 1322, 1462, 1487, 2315
MunI	CAATTG	3 cut(s)	901, 1334, 2104
Mva1269I	GAATGC	3 cut(s)	114, 1119, 1958
MvaI	CCWGG	6 cut(s)	1183, 1256, 1322, 1462, 1487, 2315
MvnI	CGCG	2 cut(s)	1637, 1778
MwoI	GCNNNNNNNGC	5 cut(s)	109, 414, 573, 1600, 2212
NarI	GGCGCC	1 cut(s)	2290
NciI	CCSGG	1 cut(s)	736
NdeI	CATATG	1 cut(s)	2248
NlaIII	CATG	9 cut(s)	61, 640, 788, 1114, 1444, 1833, 2047, 2092, 2262
NlaIV	GGNNCC	9 cut(s)	55, 260, 740, 920, 974, 1429, 2065, 2101, 2291
NmuCI	GTSAC	3 cut(s)	424, 590, 1734
NspI	RCATGY	1 cut(s)	2262
NspV	TTCGAA	1 cut(s)	2162
PciSI	GCTCTTC	2 cut(s)	1497, 1850
PctI	GAATGC	3 cut(s)	114, 1119, 1958
PdmI	GAANNNNTTC	3 cut(s)	1481, 1700, 1725
PfeI	GAWTC	4 cut(s)	817, 823, 1206, 2164
PflMI	CCANNNNNTGG	1 cut(s)	1114
PfoI	TCCNGGA	1 cut(s)	1460
PkrI	GCNGC	8 cut(s)	35, 118, 1177, 1180, 2073, 2124, 2188, 2348
PleI	GAGTC	3 cut(s)	421, 1386, 2292
PluTI	GGCGCC	1 cut(s)	2293
PmaCI	CACGTG	1 cut(s)	610
PmlI	CACGTG	1 cut(s)	610
PpsI	GAGTC	3 cut(s)	421, 1386, 2292
Ppu21I	YACGTR	2 cut(s)	610, 1198
PpuMI	RGGWCCY	1 cut(s)	2064
PsiI	TTATAA	1 cut(s)	863
Psp124BI	GAGCTC	1 cut(s)	2280
Psp5II	RGGWCCY	1 cut(s)	2064
Psp6I	CCWGG	6 cut(s)	1181, 1254, 1320, 1460, 1485, 2313
PspCI	CACGTG	1 cut(s)	610
PspEI	GGTNACC	1 cut(s)	590
PspGI	CCWGG	6 cut(s)	1181, 1254, 1320, 1460, 1485, 2313
PspN4I	GGNNCC	9 cut(s)	55, 260, 740, 920, 974, 1429, 2065, 2101, 2291
PspPI	GGNCC	4 cut(s)	54, 1428, 2064, 2317
PspPPI	RGGWCCY	1 cut(s)	2064
PsrI	GAACNNNNNNTAC	2 cut(s)	2127, 2159
PstI	CTGCAG	2 cut(s)	2188, 2351
PstNI	CAGNNNCTG	1 cut(s)	997
PsuI	RGATCY	3 cut(s)	738, 878, 1672
RsaI	GTAC	6 cut(s)	260, 278, 707, 1171, 1196, 1235
RsaNI	GTAC	6 cut(s)	259, 277, 706, 1170, 1195, 1234
SacI	GAGCTC	1 cut(s)	2280
SapI	GCTCTTC	2 cut(s)	1497, 1850
SaqAI	TTAA	6 cut(s)	946, 1369, 1540, 1646, 2033, 2391
SatI	GCNGC	8 cut(s)	34, 117, 1176, 1179, 2072, 2123, 2187, 2347
Sau96I	GGNCC	4 cut(s)	54, 1428, 2064, 2317
SchI	GAGTC	3 cut(s)	421, 1386, 2292
ScrFI	CCNGG	7 cut(s)	736, 1183, 1256, 1322, 1462, 1487, 2315
SduI	GDGCHC	1 cut(s)	2280
SfaNI	GCATC	3 cut(s)	743, 2158, 2389
SfcI	CTRYAG	5 cut(s)	851, 1589, 1770, 2184, 2347
SfoI	GGCGCC	1 cut(s)	2291
SfuI	TTCGAA	1 cut(s)	2162
SinI	GGWCC	3 cut(s)	54, 2064, 2317
SmlI	CTYRAG	1 cut(s)	48
SmoI	CTYRAG	1 cut(s)	48
SsiI	CCGC	4 cut(s)	162, 166, 205, 2336
SspDI	GGCGCC	1 cut(s)	2289
SspI	AATATT	1 cut(s)	1527
SspMI	CTAG	3 cut(s)	371, 1982, 2203
SstI	GAGCTC	1 cut(s)	2280
StyD4I	CCNGG	7 cut(s)	734, 1181, 1254, 1320, 1460, 1485, 2313
StyI	CCWWGG	1 cut(s)	141
TaaI	ACNGT	8 cut(s)	281, 292, 424, 537, 963, 999, 1894, 2324
TaiI	ACGT	2 cut(s)	612, 1200
TaqI	TCGA	4 cut(s)	72, 1270, 1950, 2162
TatI	WGTACW	1 cut(s)	1169
TfiI	GAWTC	4 cut(s)	817, 823, 1206, 2164
Tru1I	TTAA	6 cut(s)	946, 1369, 1540, 1646, 2033, 2391
Tru9I	TTAA	6 cut(s)	946, 1369, 1540, 1646, 2033, 2391
TscAI	CASTG	5 cut(s)	429, 1015, 1899, 2026, 2329
TseFI	GTSAC	3 cut(s)	424, 590, 1734
TseI	GCWGC	8 cut(s)	33, 116, 1175, 1178, 2071, 2122, 2186, 2346
Tsp45I	GTSAC	3 cut(s)	424, 590, 1734
TspDTI	ATGAA	7 cut(s)	74, 632, 773, 911, 1084, 1429, 1810
TspGWI	ACGGA	2 cut(s)	427, 1897
TspRI	CASTG	5 cut(s)	429, 1015, 1899, 2026, 2329
Van91I	CCANNNNNTGG	1 cut(s)	1114
VpaK11BI	GGWCC	3 cut(s)	54, 2064, 2317
XapI	RAATTY	4 cut(s)	1090, 1163, 1722, 1971
XbaI	TCTAGA	1 cut(s)	1981
XceI	RCATGY	1 cut(s)	2262
XmiI	GTMKAC	1 cut(s)	1773
XmnI	GAANNNNTTC	3 cut(s)	1481, 1700, 1725
XspI	CTAG	3 cut(s)	371, 1982, 2203

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.