Transcription factor IIIC subunit delta N-term
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT3G49400 AT3G49400 AT3G49400 AT3G49400 |
| fragaria_vesca | FvH4_4g12930 |
| malus_domestica | MD04G1021200.v1.1 MD10G1005500.v1.1 MD10G1005800.v1.1 |
| prunus_persica | Prupe.1G170200_v2.0.a1 Prupe.1G170200_v2.0.a1 |
| pyrus_communis | pycom04g01670 |
| rosa_chinensis | RchiOBHm_Chr4g0412561 |
| rosa_laevigata | RLG00000008274 |
| rosa_multiflora | Rmu_sc0002136.1_g000002 Rmu_sc0033953.1_g000001 |
| rosa_roxburghii | Rroxscaffold_5G00356780 |
| rosa_rugosa | Rorug04G0102900 |
| rosa_samantha | Rh4AG174300 Rh4BG173500 Rh4CG185000 Rh4DG169800 |
| rosa_wichuraiana | Rw4G014600 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 1098 |
| AasI | GACNNNNNNGTC | 1 cut(s) | 189 |
| Acc65I | GGTACC | 1 cut(s) | 493 |
| AccB1I | GGYRCC | 2 cut(s) | 493, 2596 |
| AccB7I | CCANNNNNTGG | 2 cut(s) | 105, 1349 |
| AccI | GTMKAC | 2 cut(s) | 1938, 2080 |
| AccII | CGCG | 2 cut(s) | 1944, 2085 |
| AciI | CCGC | 6 cut(s) | 63, 397, 401, 440, 1942, 2643 |
| AclWI | GGATC | 9 cut(s) | 783, 968, 981, 1031, 1736, 1779, 1987, 2189, 2367 |
| AcoI | YGGCCR | 2 cut(s) | 139, 1318 |
| AcsI | RAATTY | 6 cut(s) | 40, 1325, 1389, 1470, 2029, 2278 |
| AcuI | CTGAAG | 3 cut(s) | 1803, 2178, 2253 |
| AcvI | CACGTG | 1 cut(s) | 845 |
| AcyI | GRCGYC | 1 cut(s) | 2597 |
| AfaI | GTAC | 6 cut(s) | 495, 513, 942, 1478, 1503, 1542 |
| AfeI | AGCGCT | 1 cut(s) | 1221 |
| AfiI | CCNNNNNNNGG | 8 cut(s) | 105, 347, 562, 872, 970, 1349, 2642, 2643 |
| AflIII | ACRYGT | 1 cut(s) | 2083 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 551 |
| AjnI | CCWGG | 9 cut(s) | 57, 104, 1434, 1488, 1561, 1627, 1767, 1792, 2620 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 2046, 2078 |
| Alw21I | GWGCWC | 2 cut(s) | 82, 2587 |
| Alw26I | GTCTC | 5 cut(s) | 197, 327, 568, 2597, 2653 |
| AlwI | GGATC | 9 cut(s) | 783, 968, 981, 1031, 1736, 1779, 1987, 2189, 2367 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 1232 |
| Aor51HI | AGCGCT | 1 cut(s) | 1221 |
| AoxI | GGCC | 5 cut(s) | 60, 139, 1318, 1707, 1735 |
| ApeKI | GCWGC | 8 cut(s) | 268, 351, 1482, 1485, 2378, 2429, 2493, 2653 |
| ApoI | RAATTY | 6 cut(s) | 40, 1325, 1389, 1470, 2029, 2278 |
| Asp700I | GAANNNNTTC | 3 cut(s) | 1788, 2007, 2032 |
| Asp718I | GGTACC | 1 cut(s) | 493 |
| AspLEI | GCGC | 3 cut(s) | 1012, 1222, 2599 |
| AspS9I | GGNCC | 7 cut(s) | 108, 182, 212, 289, 1735, 2371, 2624 |
| AsuC2I | CCSGG | 1 cut(s) | 971 |
| AsuHPI | GGTGA | 3 cut(s) | 142, 819, 2682 |
| AsuII | TTCGAA | 1 cut(s) | 2469 |
| AvaII | GGWCC | 6 cut(s) | 108, 182, 212, 289, 2371, 2624 |
| BalI | TGGCCA | 1 cut(s) | 1320 |
| BamHI | GGATCC | 1 cut(s) | 973 |
| BanI | GGYRCC | 2 cut(s) | 493, 2596 |
| BanII | GRGCYC | 1 cut(s) | 2587 |
| BbrPI | CACGTG | 1 cut(s) | 845 |
| Bbv12I | GWGCWC | 2 cut(s) | 82, 2587 |
| BbvI | GCAGC | 8 cut(s) | 255, 338, 1494, 1497, 2390, 2441, 2505, 2640 |
| BccI | CCATC | 5 cut(s) | 667, 712, 1343, 1457, 1586 |
| BceAI | ACGGC | 4 cut(s) | 50, 113, 388, 2507 |
| BciT130I | CCWGG | 9 cut(s) | 59, 106, 1436, 1490, 1563, 1629, 1769, 1794, 2622 |
| BciVI | GTATCC | 2 cut(s) | 1633, 2640 |
| BclI | TGATCA | 1 cut(s) | 1669 |
| BcnI | CCSGG | 1 cut(s) | 971 |
| BcoDI | GTCTC | 5 cut(s) | 197, 327, 568, 2597, 2653 |
| BfaI | CTAG | 3 cut(s) | 606, 2289, 2510 |
| BfmI | CTRYAG | 5 cut(s) | 1086, 1896, 2077, 2491, 2654 |
| BfoI | RGCGCY | 2 cut(s) | 1223, 2600 |
| BfuI | GTATCC | 2 cut(s) | 1633, 2640 |
| BglII | AGATCT | 1 cut(s) | 1113 |
| BisI | GCNGC | 9 cut(s) | 63, 269, 352, 1483, 1486, 2379, 2430, 2494, 2654 |
| BlsI | GCNGC | 9 cut(s) | 64, 270, 353, 1484, 1487, 2380, 2431, 2495, 2655 |
| Bme18I | GGWCC | 6 cut(s) | 108, 182, 212, 289, 2371, 2624 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 551 |
| BmgT120I | GGNCC | 7 cut(s) | 108, 182, 212, 289, 1735, 2371, 2624 |
| BmiI | GGNNCC | 9 cut(s) | 290, 495, 975, 1155, 1209, 1736, 2372, 2408, 2598 |
| BmsI | GCATC | 3 cut(s) | 978, 2465, 2696 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 1976, 2008 |
| BpmI | CTGGAG | 1 cut(s) | 2460 |
| Bpu14I | TTCGAA | 1 cut(s) | 2469 |
| BpuEI | CTTGAG | 1 cut(s) | 268 |
| BpuMI | CCSGG | 1 cut(s) | 971 |
| BsaAI | YACGTR | 2 cut(s) | 845, 1505 |
| BsaBI | GATNNNNATC | 1 cut(s) | 1668 |
| BsaHI | GRCGYC | 1 cut(s) | 2597 |
| BsaI | GGTCTC | 2 cut(s) | 197, 327 |
| BsaJI | CCNNGG | 3 cut(s) | 376, 1627, 2620 |
| BsaWI | WCCGGW | 2 cut(s) | 325, 2668 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 647, 677 |
| Bsc4I | CCNNNNNNNGG | 8 cut(s) | 105, 347, 562, 872, 970, 1349, 2642, 2643 |
| Bse1I | ACTGG | 2 cut(s) | 1211, 1413 |
| Bse3DI | GCAATG | 2 cut(s) | 99, 804 |
| Bse8I | GATNNNNATC | 1 cut(s) | 1668 |
| BseBI | CCWGG | 9 cut(s) | 59, 106, 1436, 1490, 1563, 1629, 1769, 1794, 2622 |
| BseDI | CCNNGG | 3 cut(s) | 376, 1627, 2620 |
| BseGI | GGATG | 1 cut(s) | 878 |
| BseJI | GATNNNNATC | 1 cut(s) | 1668 |
| BseLI | CCNNNNNNNGG | 8 cut(s) | 105, 347, 562, 872, 970, 1349, 2642, 2643 |
| BseMI | GCAATG | 2 cut(s) | 99, 804 |
| BseMII | CTCAG | 5 cut(s) | 1256, 1559, 1794, 1877, 1974 |
| BseNI | ACTGG | 2 cut(s) | 1211, 1413 |
| BseXI | GCAGC | 8 cut(s) | 255, 338, 1494, 1497, 2390, 2441, 2505, 2640 |
| BsgI | GTGCAG | 2 cut(s) | 352, 2375 |
| Bsh1236I | CGCG | 2 cut(s) | 1944, 2085 |
| BshFI | GGCC | 5 cut(s) | 62, 141, 1320, 1709, 1737 |
| BshNI | GGYRCC | 2 cut(s) | 493, 2596 |
| BsiHKAI | GWGCWC | 2 cut(s) | 82, 2587 |
| BsiSI | CCGG | 5 cut(s) | 138, 164, 326, 970, 2669 |
| BslFI | GGGAC | 3 cut(s) | 302, 539, 2619 |
| BslI | CCNNNNNNNGG | 8 cut(s) | 105, 347, 562, 872, 970, 1349, 2642, 2643 |
| BsmAI | GTCTC | 5 cut(s) | 197, 327, 568, 2597, 2653 |
| BsmBI | CGTCTC | 1 cut(s) | 568 |
| BsmFI | GGGAC | 3 cut(s) | 302, 539, 2619 |
| BsmI | GAATGC | 3 cut(s) | 349, 1354, 2265 |
| BsnI | GGCC | 5 cut(s) | 62, 141, 1320, 1709, 1737 |
| Bso31I | GGTCTC | 2 cut(s) | 197, 327 |
| Bsp119I | TTCGAA | 1 cut(s) | 2469 |
| Bsp1286I | GDGCHC | 2 cut(s) | 82, 2587 |
| Bsp1407I | TGTACA | 1 cut(s) | 1476 |
| BspACI | CCGC | 6 cut(s) | 63, 397, 401, 440, 1942, 2643 |
| BspANI | GGCC | 5 cut(s) | 62, 141, 1320, 1709, 1737 |
| BspCNI | CTCAG | 5 cut(s) | 1255, 1560, 1795, 1876, 1975 |
| BspFNI | CGCG | 2 cut(s) | 1944, 2085 |
| BspLI | GGNNCC | 9 cut(s) | 290, 495, 975, 1155, 1209, 1736, 2372, 2408, 2598 |
| BspMAI | CTGCAG | 2 cut(s) | 2495, 2658 |
| BspPI | GGATC | 9 cut(s) | 783, 968, 981, 1031, 1736, 1779, 1987, 2189, 2367 |
| BspQI | GCTCTTC | 2 cut(s) | 1804, 2157 |
| BspT104I | TTCGAA | 1 cut(s) | 2469 |
| BspT107I | GGYRCC | 2 cut(s) | 493, 2596 |
| BspTNI | GGTCTC | 2 cut(s) | 197, 327 |
| BsrDI | GCAATG | 2 cut(s) | 99, 804 |
| BsrGI | TGTACA | 1 cut(s) | 1476 |
| BsrI | ACTGG | 2 cut(s) | 1211, 1413 |
| BssECI | CCNNGG | 3 cut(s) | 376, 1627, 2620 |
| BssNI | GRCGYC | 1 cut(s) | 2597 |
| BssT1I | CCWWGG | 1 cut(s) | 376 |
| Bst2UI | CCWGG | 9 cut(s) | 59, 106, 1436, 1490, 1563, 1629, 1769, 1794, 2622 |
| Bst4CI | ACNGT | 8 cut(s) | 516, 527, 659, 772, 1198, 1234, 2201, 2631 |
| Bst6I | CTCTTC | 3 cut(s) | 1804, 1999, 2157 |
| BstACI | GRCGYC | 1 cut(s) | 2597 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 2519 |
| BstAUI | TGTACA | 1 cut(s) | 1476 |
| BstBAI | YACGTR | 2 cut(s) | 845, 1505 |
| BstBI | TTCGAA | 1 cut(s) | 2469 |
| BstDEI | CTNAG | 6 cut(s) | 1242, 1568, 1803, 1863, 1983, 2366 |
| BstEII | GGTNACC | 1 cut(s) | 825 |
| BstF5I | GGATG | 1 cut(s) | 878 |
| BstFNI | CGCG | 2 cut(s) | 1944, 2085 |
| BstH2I | RGCGCY | 2 cut(s) | 1223, 2600 |
| BstHHI | GCGC | 3 cut(s) | 1012, 1222, 2599 |
| BstMAI | GTCTC | 5 cut(s) | 197, 327, 568, 2597, 2653 |
| BstMWI | GCNNNNNNNGC | 5 cut(s) | 344, 649, 808, 1907, 2519 |
| BstNI | CCWGG | 9 cut(s) | 59, 106, 1436, 1490, 1563, 1629, 1769, 1794, 2622 |
| BstNSI | RCATGY | 1 cut(s) | 2569 |
| BstPI | GGTNACC | 1 cut(s) | 825 |
| BstSFI | CTRYAG | 5 cut(s) | 1086, 1896, 2077, 2491, 2654 |
| BstUI | CGCG | 2 cut(s) | 1944, 2085 |
| BstV1I | GCAGC | 8 cut(s) | 255, 338, 1494, 1497, 2390, 2441, 2505, 2640 |
| BstX2I | RGATCY | 3 cut(s) | 973, 1113, 1979 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 673 |
| BstYI | RGATCY | 3 cut(s) | 973, 1113, 1979 |
| BsuI | GTATCC | 2 cut(s) | 1633, 2640 |
| BsuRI | GGCC | 5 cut(s) | 62, 141, 1320, 1709, 1737 |
| BtgZI | GCGATG | 2 cut(s) | 109, 792 |
| BtsCI | GGATG | 1 cut(s) | 878 |
| BtsI | GCAGTG | 2 cut(s) | 170, 2333 |
| BtsIMutI | CAGTG | 7 cut(s) | 170, 664, 1250, 1406, 2206, 2333, 2636 |
| CaiI | CAGNNNCTG | 1 cut(s) | 1232 |
| CfoI | GCGC | 3 cut(s) | 1012, 1222, 2599 |
| Cfr13I | GGNCC | 7 cut(s) | 108, 182, 212, 289, 1735, 2371, 2624 |
| CseI | GACGC | 1 cut(s) | 2091 |
| Csp6I | GTAC | 6 cut(s) | 494, 512, 941, 1477, 1502, 1541 |
| CviAII | CATG | 9 cut(s) | 293, 872, 1020, 1346, 1748, 2137, 2351, 2396, 2566 |
| CviQI | GTAC | 6 cut(s) | 494, 512, 941, 1477, 1502, 1541 |
| DdeI | CTNAG | 6 cut(s) | 1242, 1568, 1803, 1863, 1983, 2366 |
| DinI | GGCGCC | 1 cut(s) | 2598 |
| DraI | TTTAAA | 1 cut(s) | 1848 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 189 |
| DriI | GACNNNNNGTC | 1 cut(s) | 551 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 189 |
| EaeI | YGGCCR | 2 cut(s) | 139, 1318 |
| Eam1104I | CTCTTC | 3 cut(s) | 1804, 1999, 2157 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 551 |
| EarI | CTCTTC | 3 cut(s) | 1804, 1999, 2157 |
| Ecl136II | GAGCTC | 1 cut(s) | 2585 |
| Eco130I | CCWWGG | 1 cut(s) | 376 |
| Eco24I | GRGCYC | 1 cut(s) | 2587 |
| Eco31I | GGTCTC | 2 cut(s) | 197, 327 |
| Eco47I | GGWCC | 6 cut(s) | 108, 182, 212, 289, 2371, 2624 |
| Eco47III | AGCGCT | 1 cut(s) | 1221 |
| Eco53kI | GAGCTC | 1 cut(s) | 2585 |
| Eco57I | CTGAAG | 3 cut(s) | 1803, 2178, 2253 |
| Eco72I | CACGTG | 1 cut(s) | 845 |
| Eco91I | GGTNACC | 1 cut(s) | 825 |
| EcoICRI | GAGCTC | 1 cut(s) | 2585 |
| EcoO109I | RGGNCCY | 1 cut(s) | 2371 |
| EcoO65I | GGTNACC | 1 cut(s) | 825 |
| EcoRII | CCWGG | 9 cut(s) | 57, 104, 1434, 1488, 1561, 1627, 1767, 1792, 2620 |
| EcoT14I | CCWWGG | 1 cut(s) | 376 |
| EcoT38I | GRGCYC | 1 cut(s) | 2587 |
| EgeI | GGCGCC | 1 cut(s) | 2598 |
| EheI | GGCGCC | 1 cut(s) | 2598 |
| ErhI | CCWWGG | 1 cut(s) | 376 |
| Esp3I | CGTCTC | 1 cut(s) | 568 |
| FaeI | CATG | 9 cut(s) | 296, 875, 1023, 1349, 1751, 2140, 2354, 2399, 2569 |
| FaqI | GGGAC | 3 cut(s) | 302, 539, 2619 |
| FatI | CATG | 9 cut(s) | 292, 871, 1019, 1345, 1747, 2136, 2350, 2395, 2565 |
| FauI | CCCGC | 2 cut(s) | 408, 2636 |
| FauNDI | CATATG | 1 cut(s) | 2555 |
| FbaI | TGATCA | 1 cut(s) | 1669 |
| FblI | GTMKAC | 2 cut(s) | 1938, 2080 |
| Fnu4HI | GCNGC | 9 cut(s) | 63, 269, 352, 1483, 1486, 2379, 2430, 2494, 2654 |
| FokI | GGATG | 1 cut(s) | 865 |
| FriOI | GRGCYC | 1 cut(s) | 2587 |
| Fsp4HI | GCNGC | 9 cut(s) | 63, 269, 352, 1483, 1486, 2379, 2430, 2494, 2654 |
| FspBI | CTAG | 3 cut(s) | 606, 2289, 2510 |
| GlaI | GCGC | 3 cut(s) | 1011, 1221, 2598 |
| GluI | GCNGC | 9 cut(s) | 63, 269, 352, 1483, 1486, 2379, 2430, 2494, 2654 |
| GsuI | CTGGAG | 1 cut(s) | 2460 |
| HaeII | RGCGCY | 2 cut(s) | 1223, 2600 |
| HaeIII | GGCC | 5 cut(s) | 62, 141, 1320, 1709, 1737 |
| HapII | CCGG | 5 cut(s) | 138, 164, 326, 970, 2669 |
| HgaI | GACGC | 1 cut(s) | 2091 |
| HhaI | GCGC | 3 cut(s) | 1012, 1222, 2599 |
| Hin1I | GRCGYC | 1 cut(s) | 2597 |
| Hin1II | CATG | 9 cut(s) | 296, 875, 1023, 1349, 1751, 2140, 2354, 2399, 2569 |
| Hin6I | GCGC | 3 cut(s) | 1010, 1220, 2597 |
| HinP1I | GCGC | 3 cut(s) | 1010, 1220, 2597 |
| HincII | GTYRAC | 1 cut(s) | 961 |
| HindII | GTYRAC | 1 cut(s) | 961 |
| HindIII | AAGCTT | 2 cut(s) | 389, 455 |
| HinfI | GANTC | 8 cut(s) | 160, 662, 1052, 1058, 1513, 1699, 2471, 2605 |
| HpaII | CCGG | 5 cut(s) | 138, 164, 326, 970, 2669 |
| HphI | GGTGA | 3 cut(s) | 142, 819, 2682 |
| Hpy166II | GTNNAC | 8 cut(s) | 545, 961, 1250, 1343, 1939, 2081, 2235, 2627 |
| Hpy188III | TCNNGA | 8 cut(s) | 733, 1589, 1726, 1775, 1865, 2025, 2289, 2477 |
| Hpy8I | GTNNAC | 8 cut(s) | 545, 961, 1250, 1343, 1939, 2081, 2235, 2627 |
| Hpy99I | CGWCG | 3 cut(s) | 77, 116, 134 |
| HpyAV | CCTTC | 7 cut(s) | 1560, 1801, 2072, 2098, 2135, 2497, 2647 |
| HpyCH4III | ACNGT | 8 cut(s) | 516, 527, 659, 772, 1198, 1234, 2201, 2631 |
| HpyCH4IV | ACGT | 2 cut(s) | 844, 1504 |
| HpyF10VI | GCNNNNNNNGC | 5 cut(s) | 344, 649, 808, 1907, 2519 |
| HpyF3I | CTNAG | 6 cut(s) | 1242, 1568, 1803, 1863, 1983, 2366 |
| HpySE526I | ACGT | 2 cut(s) | 844, 1504 |
| Hsp92I | GRCGYC | 1 cut(s) | 2597 |
| Hsp92II | CATG | 9 cut(s) | 296, 875, 1023, 1349, 1751, 2140, 2354, 2399, 2569 |
| HspAI | GCGC | 3 cut(s) | 1010, 1220, 2597 |
| KasI | GGCGCC | 1 cut(s) | 2596 |
| KpnI | GGTACC | 1 cut(s) | 497 |
| Ksp22I | TGATCA | 1 cut(s) | 1669 |
| LguI | GCTCTTC | 2 cut(s) | 1804, 2157 |
| LmnI | GCTCC | 5 cut(s) | 85, 343, 649, 2323, 2412 |
| Lsp1109I | GCAGC | 8 cut(s) | 255, 338, 1494, 1497, 2390, 2441, 2505, 2640 |
| LweI | GCATC | 3 cut(s) | 978, 2465, 2696 |
| MaeI | CTAG | 3 cut(s) | 606, 2289, 2510 |
| MaeII | ACGT | 2 cut(s) | 844, 1504 |
| MaeIII | GTNAC | 7 cut(s) | 148, 608, 659, 825, 1228, 1438, 2041 |
| MboII | GAAGA | 9 cut(s) | 689, 748, 1123, 1577, 1791, 1986, 2171, 2174, 2235 |
| MfeI | CAATTG | 4 cut(s) | 225, 1136, 1641, 2411 |
| MflI | RGATCY | 3 cut(s) | 973, 1113, 1979 |
| MhlI | GDGCHC | 2 cut(s) | 82, 2587 |
| MlsI | TGGCCA | 1 cut(s) | 1320 |
| MluI | ACGCGT | 1 cut(s) | 2083 |
| MluNI | TGGCCA | 1 cut(s) | 1320 |
| Mly113I | GGCGCC | 1 cut(s) | 2597 |
| MlyI | GAGTC | 3 cut(s) | 656, 1693, 2599 |
| MmeI | TCCRAC | 5 cut(s) | 135, 690, 1001, 1171, 1490 |
| Mox20I | TGGCCA | 1 cut(s) | 1320 |
| MroXI | GAANNNNTTC | 3 cut(s) | 1788, 2007, 2032 |
| MscI | TGGCCA | 1 cut(s) | 1320 |
| MseI | TTAA | 6 cut(s) | 1181, 1676, 1847, 1953, 2340, 2698 |
| Msp20I | TGGCCA | 1 cut(s) | 1320 |
| MspI | CCGG | 5 cut(s) | 138, 164, 326, 970, 2669 |
| MunI | CAATTG | 4 cut(s) | 225, 1136, 1641, 2411 |
| Mva1269I | GAATGC | 3 cut(s) | 349, 1354, 2265 |
| MvaI | CCWGG | 9 cut(s) | 59, 106, 1436, 1490, 1563, 1629, 1769, 1794, 2622 |
| MvnI | CGCG | 2 cut(s) | 1944, 2085 |
| MwoI | GCNNNNNNNGC | 5 cut(s) | 344, 649, 808, 1907, 2519 |
| NarI | GGCGCC | 1 cut(s) | 2597 |
| NciI | CCSGG | 1 cut(s) | 971 |
| NdeI | CATATG | 1 cut(s) | 2555 |
| NlaIII | CATG | 9 cut(s) | 296, 875, 1023, 1349, 1751, 2140, 2354, 2399, 2569 |
| NlaIV | GGNNCC | 9 cut(s) | 290, 495, 975, 1155, 1209, 1736, 2372, 2408, 2598 |
| NmuCI | GTSAC | 4 cut(s) | 148, 659, 825, 2041 |
| NspI | RCATGY | 1 cut(s) | 2569 |
| NspV | TTCGAA | 1 cut(s) | 2469 |
| PciSI | GCTCTTC | 2 cut(s) | 1804, 2157 |
| PctI | GAATGC | 3 cut(s) | 349, 1354, 2265 |
| PdmI | GAANNNNTTC | 3 cut(s) | 1788, 2007, 2032 |
| PfeI | GAWTC | 5 cut(s) | 160, 1052, 1058, 1513, 2471 |
| PflMI | CCANNNNNTGG | 2 cut(s) | 105, 1349 |
| PfoI | TCCNGGA | 1 cut(s) | 1767 |
| PkrI | GCNGC | 9 cut(s) | 64, 270, 353, 1484, 1487, 2380, 2431, 2495, 2655 |
| PleI | GAGTC | 3 cut(s) | 656, 1693, 2599 |
| PluTI | GGCGCC | 1 cut(s) | 2600 |
| PmaCI | CACGTG | 1 cut(s) | 845 |
| PmlI | CACGTG | 1 cut(s) | 845 |
| PpsI | GAGTC | 3 cut(s) | 656, 1693, 2599 |
| Ppu21I | YACGTR | 2 cut(s) | 845, 1505 |
| PpuMI | RGGWCCY | 1 cut(s) | 2371 |
| PsiI | TTATAA | 1 cut(s) | 1098 |
| Psp124BI | GAGCTC | 1 cut(s) | 2587 |
| Psp5II | RGGWCCY | 1 cut(s) | 2371 |
| Psp6I | CCWGG | 9 cut(s) | 57, 104, 1434, 1488, 1561, 1627, 1767, 1792, 2620 |
| PspCI | CACGTG | 1 cut(s) | 845 |
| PspEI | GGTNACC | 1 cut(s) | 825 |
| PspGI | CCWGG | 9 cut(s) | 57, 104, 1434, 1488, 1561, 1627, 1767, 1792, 2620 |
| PspN4I | GGNNCC | 9 cut(s) | 290, 495, 975, 1155, 1209, 1736, 2372, 2408, 2598 |
| PspPI | GGNCC | 7 cut(s) | 108, 182, 212, 289, 1735, 2371, 2624 |
| PspPPI | RGGWCCY | 1 cut(s) | 2371 |
| PsrI | GAACNNNNNNTAC | 2 cut(s) | 2434, 2466 |
| PstI | CTGCAG | 2 cut(s) | 2495, 2658 |
| PstNI | CAGNNNCTG | 1 cut(s) | 1232 |
| PsuI | RGATCY | 3 cut(s) | 973, 1113, 1979 |
| RsaI | GTAC | 6 cut(s) | 495, 513, 942, 1478, 1503, 1542 |
| RsaNI | GTAC | 6 cut(s) | 494, 512, 941, 1477, 1502, 1541 |
| SacI | GAGCTC | 1 cut(s) | 2587 |
| SapI | GCTCTTC | 2 cut(s) | 1804, 2157 |
| SaqAI | TTAA | 6 cut(s) | 1181, 1676, 1847, 1953, 2340, 2698 |
| SatI | GCNGC | 9 cut(s) | 63, 269, 352, 1483, 1486, 2379, 2430, 2494, 2654 |
| Sau96I | GGNCC | 7 cut(s) | 108, 182, 212, 289, 1735, 2371, 2624 |
| SchI | GAGTC | 3 cut(s) | 656, 1693, 2599 |
| SduI | GDGCHC | 2 cut(s) | 82, 2587 |
| SfaNI | GCATC | 3 cut(s) | 978, 2465, 2696 |
| SfcI | CTRYAG | 5 cut(s) | 1086, 1896, 2077, 2491, 2654 |
| SfoI | GGCGCC | 1 cut(s) | 2598 |
| SfuI | TTCGAA | 1 cut(s) | 2469 |
| SinI | GGWCC | 6 cut(s) | 108, 182, 212, 289, 2371, 2624 |
| SmlI | CTYRAG | 1 cut(s) | 283 |
| SmoI | CTYRAG | 1 cut(s) | 283 |
| SsiI | CCGC | 6 cut(s) | 63, 397, 401, 440, 1942, 2643 |
| SspDI | GGCGCC | 1 cut(s) | 2596 |
| SspI | AATATT | 1 cut(s) | 1834 |
| SspMI | CTAG | 3 cut(s) | 606, 2289, 2510 |
| SstI | GAGCTC | 1 cut(s) | 2587 |
| StyI | CCWWGG | 1 cut(s) | 376 |
| TaaI | ACNGT | 8 cut(s) | 516, 527, 659, 772, 1198, 1234, 2201, 2631 |
| TaiI | ACGT | 2 cut(s) | 847, 1507 |
| TaqI | TCGA | 4 cut(s) | 307, 1577, 2257, 2469 |
| TatI | WGTACW | 1 cut(s) | 1476 |
| TauI | GCSGC | 1 cut(s) | 65 |
| TfiI | GAWTC | 5 cut(s) | 160, 1052, 1058, 1513, 2471 |
| Tru1I | TTAA | 6 cut(s) | 1181, 1676, 1847, 1953, 2340, 2698 |
| Tru9I | TTAA | 6 cut(s) | 1181, 1676, 1847, 1953, 2340, 2698 |
| TscAI | CASTG | 7 cut(s) | 177, 664, 1250, 1413, 2206, 2333, 2636 |
| TseFI | GTSAC | 4 cut(s) | 148, 659, 825, 2041 |
| TseI | GCWGC | 8 cut(s) | 268, 351, 1482, 1485, 2378, 2429, 2493, 2653 |
| Tsp45I | GTSAC | 4 cut(s) | 148, 659, 825, 2041 |
| TspDTI | ATGAA | 8 cut(s) | 309, 867, 1008, 1146, 1319, 1368, 1736, 2117 |
| TspGWI | ACGGA | 3 cut(s) | 225, 662, 2204 |
| TspRI | CASTG | 7 cut(s) | 177, 664, 1250, 1413, 2206, 2333, 2636 |
| Van91I | CCANNNNNTGG | 2 cut(s) | 105, 1349 |
| VpaK11BI | GGWCC | 6 cut(s) | 108, 182, 212, 289, 2371, 2624 |
| XapI | RAATTY | 6 cut(s) | 40, 1325, 1389, 1470, 2029, 2278 |
| XbaI | TCTAGA | 1 cut(s) | 2288 |
| XceI | RCATGY | 1 cut(s) | 2569 |
| XmiI | GTMKAC | 2 cut(s) | 1938, 2080 |
| XmnI | GAANNNNTTC | 3 cut(s) | 1788, 2007, 2032 |
| XspI | CTAG | 3 cut(s) | 606, 2289, 2510 |